Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
FLNB 89 10 112 69 0 0 0.345 0.039 0.434 0.267 0.000 0.000 chr3 58003422 58177251
FLNC 191 60 59 39 0 0 0.740 0.233 0.229 0.151 0.000 0.000 chr7 128825406 128864272
FLOT1 220 76 34 26 0 0 0.853 0.295 0.132 0.101 0.000 0.000 chr6 30722709 30747687
FLOT2 210 75 44 26 0 0 0.814 0.291 0.171 0.101 0.000 0.000 chr17 28874339 28902733
FLRT1 149 38 65 37 0 0 0.578 0.147 0.252 0.143 0.000 0.000 chr11 64030931 64124171
FLRT2 168 58 56 28 0 0 0.651 0.225 0.217 0.109 0.000 0.000 chr14 85525144 85659428
FLRT3 214 80 41 22 0 0 0.829 0.310 0.159 0.085 0.000 0.000 chr20 14317985 14342612
FLT1 113 18 86 59 0 0 0.438 0.070 0.333 0.229 0.000 0.000 chr13 28295346 28500128
FLT3LG 165 42 83 55 0 0 0.640 0.163 0.322 0.213 0.000 0.000 chr19 49469215 49491231
FLT3 145 33 87 57 0 0 0.562 0.128 0.337 0.221 0.000 0.000 chr13 27998274 28105576
FLT4 194 52 38 29 0 0 0.752 0.202 0.147 0.112 0.000 0.000 chr5 180596506 180654600
FLVCR1 183 65 69 35 0 0 0.709 0.252 0.267 0.136 0.000 0.000 chr1 212853275 212904363
FLVCR2 167 52 68 35 0 0 0.647 0.202 0.264 0.136 0.000 0.000 chr14 75573620 75653167
FLYWCH1 207 64 41 32 0 0 0.802 0.248 0.159 0.124 0.000 0.000 chr16 2906931 2956208
FLYWCH2 194 61 59 40 0 0 0.752 0.236 0.229 0.155 0.000 0.000 chr16 2878215 2904365
FMC1 205 69 49 32 0 0 0.795 0.267 0.190 0.124 0.000 0.000 chr7 139336337 139351328
FMN1 97 16 71 40 0 0 0.376 0.062 0.275 0.155 0.000 0.000 chr15 32760544 33199714
FMN2 86 9 93 55 0 0 0.333 0.035 0.360 0.213 0.000 0.000 chr1 240086883 240480187
FMNL1 191 60 58 39 0 0 0.740 0.233 0.225 0.151 0.000 0.000 chr17 45216885 45252318
FMNL2 99 13 77 41 0 0 0.384 0.050 0.298 0.159 0.000 0.000 chr2 152330174 152654826
FMNL3 74 11 166 84 0 0 0.287 0.043 0.643 0.326 0.000 0.000 chr12 49631499 49712405
FMO1 155 43 83 48 0 0 0.601 0.167 0.322 0.186 0.000 0.000 chr1 171243494 171290961
FMO2 182 65 63 34 0 0 0.705 0.252 0.244 0.132 0.000 0.000 chr1 171180300 171217686
FMO3 201 73 48 26 1 1 0.779 0.283 0.186 0.101 0.004 0.004 chr1 171085905 171122819
FMO4 192 67 54 30 0 0 0.744 0.260 0.209 0.116 0.000 0.000 chr1 171309183 171347084
FMO5 203 72 44 25 0 0 0.787 0.279 0.171 0.097 0.000 0.000 chr1 147181261 147230339
FMOD 237 93 20 11 0 0 0.919 0.360 0.078 0.043 0.000 0.000 chr1 203335628 203356122
FMR1NB 74 13 173 83 0 0 0.287 0.050 0.671 0.322 0.000 0.000 chrX 147976337 148031665
FMR1 88 25 162 74 0 0 0.341 0.097 0.628 0.287 0.000 0.000 chrX 147906919 147956125
FN1 119 9 118 84 0 0 0.461 0.035 0.457 0.326 0.000 0.000 chr2 215355865 215441068
FN3KRP 212 69 40 31 0 0 0.822 0.267 0.155 0.120 0.000 0.000 chr17 82711706 82733013
FN3K 200 63 52 37 0 0 0.775 0.244 0.202 0.143 0.000 0.000 chr17 82730615 82756196
FNBP1L 161 48 77 47 0 0 0.624 0.186 0.298 0.182 0.000 0.000 chr1 93443118 93559661
FNBP1 105 20 100 62 0 0 0.407 0.078 0.388 0.240 0.000 0.000 chr9 129882187 130048189
FNBP4 174 58 76 43 0 0 0.674 0.225 0.295 0.167 0.000 0.000 chr11 47711494 47772341
FNDC10 202 62 48 36 0 0 0.783 0.240 0.186 0.140 0.000 0.000 chr1 1593012 1605135
FNDC11 207 62 40 33 0 0 0.802 0.240 0.155 0.128 0.000 0.000 chr20 63549159 63561695
FNDC1 152 43 65 41 0 0 0.589 0.167 0.252 0.159 0.000 0.000 chr6 159164400 159277108
FNDC3A 145 49 87 47 0 0 0.562 0.190 0.337 0.182 0.000 0.000 chr13 48970912 49214779
FNDC3B 97 17 76 45 0 0 0.376 0.066 0.295 0.174 0.000 0.000 chr3 172034578 172406669
FNDC4 155 39 99 62 0 0 0.601 0.151 0.384 0.240 0.000 0.000 chr2 27486883 27500200
FNDC5 206 66 49 38 1 0 0.798 0.256 0.190 0.147 0.004 0.000 chr1 32857268 32875912
FNDC7 187 56 57 38 0 0 0.725 0.217 0.221 0.147 0.000 0.000 chr1 108707908 108747749
FNDC8 207 69 49 34 0 0 0.802 0.267 0.190 0.132 0.000 0.000 chr17 35116615 35135732
FNDC9 188 51 68 52 0 0 0.729 0.198 0.264 0.202 0.000 0.000 chr5 157336598 157350677
FNIP1 163 62 74 36 0 0 0.632 0.240 0.287 0.140 0.000 0.000 chr5 131636714 131802017
FNIP2 126 27 116 73 0 0 0.488 0.105 0.450 0.283 0.000 0.000 chr4 158764026 158913050
FNTA 146 33 96 60 0 0 0.566 0.128 0.372 0.233 0.000 0.000 chr8 43051323 43090785
FNTB 179 55 61 39 0 0 0.694 0.213 0.236 0.151 0.000 0.000 chr14 64981895 65067650
FOCAD 159 54 62 32 0 0 0.616 0.209 0.240 0.124 0.000 0.000 chr9 20679259 21000950