Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
FHL1 83 29 172 75 0 0 0.322 0.112 0.667 0.291 0.000 0.000 chrX 136192047 136216354
FHL2 223 85 28 14 0 0 0.864 0.329 0.109 0.054 0.000 0.000 chr2 105355826 105404051
FHL3 228 80 26 21 1 1 0.884 0.310 0.101 0.081 0.004 0.004 chr1 37991770 38010514
FHL5 188 67 58 33 0 0 0.729 0.260 0.225 0.128 0.000 0.000 chr6 96558128 96623626
FHOD1 104 11 140 81 0 0 0.403 0.043 0.543 0.314 0.000 0.000 chr16 67224389 67252481
FHOD3 83 14 86 53 0 0 0.322 0.054 0.333 0.205 0.000 0.000 chr18 36292713 36785220
FH 202 81 53 22 0 0 0.783 0.314 0.205 0.085 0.000 0.000 chr1 241492603 241524755
FIBCD1 190 55 49 38 0 0 0.736 0.213 0.190 0.147 0.000 0.000 chr9 130897440 130944247
FIBIN 225 80 31 24 2 1 0.872 0.310 0.120 0.093 0.008 0.004 chr11 26989112 27002087
FIBP 193 66 61 37 0 0 0.748 0.256 0.236 0.143 0.000 0.000 chr11 65878740 65893471
FICD 222 85 36 20 0 0 0.860 0.329 0.140 0.078 0.000 0.000 chr12 108510277 108526210
FIG4 184 66 53 31 0 0 0.713 0.256 0.205 0.120 0.000 0.000 chr6 109686296 109830426
FIGLA 218 80 32 18 1 1 0.845 0.310 0.124 0.070 0.004 0.004 chr2 70772310 70795643
FIGNL1 211 82 45 22 0 0 0.818 0.318 0.174 0.085 0.000 0.000 chr7 50439133 50455350
FIGNL2 203 66 37 24 0 0 0.787 0.256 0.143 0.093 0.000 0.000 chr12 51812899 51853718
FIGN 132 43 88 41 0 0 0.512 0.167 0.341 0.159 0.000 0.000 chr2 163597611 163741008
FILIP1L 128 27 90 56 0 0 0.496 0.105 0.349 0.217 0.000 0.000 chr3 99823811 100119501
FILIP1 152 51 69 38 0 0 0.589 0.198 0.267 0.147 0.000 0.000 chr6 75303090 75498800
FIP1L1 195 67 56 34 0 0 0.756 0.260 0.217 0.132 0.000 0.000 chr4 53372641 53465862
FIRRM 209 76 44 26 0 0 0.810 0.295 0.171 0.101 0.000 0.000 chr1 169790040 169859080
FIS1 207 72 46 30 0 0 0.802 0.279 0.178 0.116 0.000 0.000 chr7 101234472 101250081
FITM1 197 65 57 37 0 0 0.764 0.252 0.221 0.143 0.000 0.000 chr14 24125659 24137847
FITM2 211 79 45 24 0 0 0.818 0.306 0.174 0.093 0.000 0.000 chr20 44297840 44316202
FIZ1 215 71 39 30 0 0 0.833 0.275 0.151 0.116 0.000 0.000 chr19 55586376 55604517
FJX1 230 86 27 18 0 0 0.891 0.333 0.105 0.070 0.000 0.000 chr11 35613460 35625865
FKBP10 195 62 61 42 0 0 0.756 0.240 0.236 0.163 0.000 0.000 chr17 41808004 41828213
FKBP11 190 58 61 40 1 1 0.736 0.225 0.236 0.155 0.004 0.004 chr12 48916963 48930492
FKBP14 162 48 85 51 0 0 0.628 0.186 0.329 0.198 0.000 0.000 chr7 30005587 30031702
FKBP15 204 80 40 17 0 0 0.791 0.310 0.155 0.066 0.000 0.000 chr9 113156006 113226277
FKBP1A 193 67 55 32 0 0 0.748 0.260 0.213 0.124 0.000 0.000 chr20 1363978 1398054
FKBP1B 154 40 97 59 1 1 0.597 0.155 0.376 0.229 0.004 0.004 chr2 24044741 24068681
FKBP2 165 45 76 44 1 1 0.640 0.174 0.295 0.171 0.004 0.004 chr11 64236095 64249132
FKBP3 151 44 98 56 0 0 0.585 0.171 0.380 0.217 0.000 0.000 chr14 45110599 45139481
FKBP4 192 68 63 35 0 0 0.744 0.264 0.244 0.136 0.000 0.000 chr12 2789970 2810423
FKBP5 150 48 84 42 0 0 0.581 0.186 0.326 0.163 0.000 0.000 chr6 35568590 35693915
FKBP6 159 48 83 44 0 0 0.616 0.186 0.322 0.171 0.000 0.000 chr7 73323161 73363625
FKBP7 198 78 53 22 0 0 0.767 0.302 0.205 0.085 0.000 0.000 chr2 178458664 178483600
FKBP8 194 61 61 41 0 0 0.752 0.236 0.236 0.159 0.000 0.000 chr19 18526763 18548573
FKBP9 214 78 29 18 0 0 0.829 0.302 0.112 0.070 0.000 0.000 chr7 32952440 33011928
FKBPL 212 72 45 32 0 0 0.822 0.279 0.174 0.124 0.000 0.000 chr6 32123707 32135288
FKRP 214 71 38 29 1 1 0.829 0.275 0.147 0.112 0.004 0.004 chr19 46741057 46763575
FKTN 188 73 60 29 0 0 0.729 0.283 0.233 0.112 0.000 0.000 chr9 105553131 105646118
FLACC1 184 61 67 40 0 0 0.713 0.236 0.260 0.155 0.000 0.000 chr2 201283271 201362345
FLAD1 141 29 105 68 1 0 0.547 0.112 0.407 0.264 0.004 0.000 chr1 154978344 154998111
FLCN 184 52 62 43 0 0 0.713 0.202 0.240 0.167 0.000 0.000 chr17 17207212 17242168
FLG2 210 80 46 24 1 1 0.814 0.310 0.178 0.093 0.004 0.004 chr1 152343735 152365006
FLG 212 77 41 27 0 0 0.822 0.298 0.159 0.105 0.000 0.000 chr1 152297165 152330239
FLI1 163 53 48 29 0 0 0.632 0.205 0.186 0.112 0.000 0.000 chr11 128689072 128818267
FLII 205 71 50 31 0 0 0.795 0.275 0.194 0.120 0.000 0.000 chr17 18239815 18263738
FLNA 77 17 161 72 0 0 0.298 0.066 0.624 0.279 0.000 0.000 chrX 154343531 154379634