Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view FGD1 70 20 176 77 0 0 0.271 0.078 0.682 0.298 0.000 0.000 chrX 54440454 54501234
view FGD2 214 73 36 24 0 0 0.829 0.283 0.140 0.093 0.000 0.000 chr6 37000655 37034069
view FGD3 160 49 65 36 0 0 0.620 0.190 0.252 0.140 0.000 0.000 chr9 92942523 93041233
view FGD4 115 21 75 44 0 0 0.446 0.081 0.291 0.171 0.000 0.000 chr12 32394558 32651050
view FGD5 170 55 62 36 0 0 0.659 0.213 0.240 0.140 0.000 0.000 chr3 14813962 14939571
view FGD6 191 65 47 31 0 0 0.740 0.252 0.182 0.120 0.000 0.000 chr12 95071749 95222467
view FGF10 174 65 65 32 0 0 0.674 0.252 0.252 0.124 0.000 0.000 chr5 44295247 44394420
view FGF11 174 55 79 47 3 1 0.674 0.213 0.306 0.182 0.012 0.004 chr17 7434512 7449937
view FGF12 45 4 91 47 0 0 0.174 0.016 0.353 0.182 0.000 0.000 chr3 192134390 192732541
view FGF13 56 11 179 82 0 0 0.217 0.043 0.694 0.318 0.000 0.000 chrX 138609727 138716717
view FGF14 132 28 71 43 0 0 0.512 0.109 0.275 0.167 0.000 0.000 chr13 101705804 101921945
view FGF16 92 33 161 68 0 0 0.357 0.128 0.624 0.264 0.000 0.000 chrX 77442389 77462278
view FGF17 226 82 31 22 0 0 0.876 0.318 0.120 0.085 0.000 0.000 chr8 22037820 22053809
view FGF18 193 59 56 38 0 0 0.748 0.229 0.217 0.147 0.000 0.000 chr5 171414647 171462626
view FGF19 219 77 36 26 1 0 0.849 0.298 0.140 0.101 0.004 0.000 chr11 69693238 69709022
view FGF1 169 53 51 30 0 0 0.655 0.205 0.198 0.116 0.000 0.000 chr5 142587178 142691090
view FGF20 227 83 28 20 1 0 0.880 0.322 0.109 0.078 0.004 0.000 chr8 16987181 17007345
view FGF21 227 79 24 20 0 0 0.880 0.306 0.093 0.078 0.000 0.000 chr19 48750524 48763330
view FGF22 216 70 36 29 0 0 0.837 0.271 0.140 0.112 0.000 0.000 chr19 634879 649373
view FGF23 213 78 42 25 0 0 0.826 0.302 0.163 0.097 0.000 0.000 chr12 4363227 4384712
view FGF2 127 21 102 69 0 0 0.492 0.081 0.395 0.267 0.000 0.000 chr4 122821831 122903236
view FGF3 210 72 45 30 0 0 0.814 0.279 0.174 0.116 0.000 0.000 chr11 69804968 69824416
view FGF4 216 78 39 24 1 1 0.837 0.302 0.151 0.093 0.004 0.004 chr11 69766022 69780341
view FGF5 227 88 29 15 0 0 0.880 0.341 0.112 0.058 0.000 0.000 chr4 80261664 80296017
view FGF6 224 84 31 19 1 0 0.868 0.326 0.120 0.074 0.004 0.000 chr12 4429142 4450815
view FGF7 178 61 59 30 0 0 0.690 0.236 0.229 0.116 0.000 0.000 chr15 49418242 49493775
view FGF8 179 58 75 43 0 0 0.694 0.225 0.291 0.167 0.000 0.000 chr10 101765109 101781114
view FGF9 180 57 63 38 0 0 0.698 0.221 0.244 0.147 0.000 0.000 chr13 21666073 21709498
view FGFBP1 238 89 19 15 0 0 0.922 0.345 0.074 0.058 0.000 0.000 chr4 15930577 15943740
view FGFBP2 228 83 30 22 0 0 0.884 0.322 0.116 0.085 0.000 0.000 chr4 15955245 15968175
view FGFBP3 207 66 49 38 1 0 0.802 0.256 0.190 0.147 0.004 0.000 chr10 91901584 91914486
view FGFR1OP2 212 83 36 17 1 1 0.822 0.322 0.140 0.066 0.004 0.004 chr12 26933470 26971648
view FGFR1 167 56 61 37 0 0 0.647 0.217 0.236 0.143 0.000 0.000 chr8 38406143 38473635
view FGFR2 119 23 78 48 0 0 0.461 0.089 0.302 0.186 0.000 0.000 chr10 121473332 121603444
view FGFR3 189 55 59 40 0 0 0.733 0.213 0.229 0.155 0.000 0.000 chr4 1788293 1813867
view FGFR4 185 47 66 52 1 0 0.717 0.182 0.256 0.202 0.004 0.000 chr5 177081915 177103144
view FGFRL1 206 62 37 30 0 0 0.798 0.240 0.143 0.116 0.000 0.000 chr4 1006626 1031898
view FGGY 82 12 83 54 0 0 0.318 0.047 0.322 0.209 0.000 0.000 chr1 59292094 59767730
view FGG 212 84 44 20 1 1 0.822 0.326 0.171 0.078 0.004 0.004 chr4 154599171 154617656
view FGL1 182 54 61 38 0 0 0.705 0.209 0.236 0.147 0.000 0.000 chr8 17859389 17900524
view FGL2 215 78 42 26 1 1 0.833 0.302 0.163 0.101 0.004 0.004 chr7 77188369 77204819
view FGR 138 22 89 62 0 0 0.535 0.085 0.345 0.240 0.000 0.000 chr1 27607064 27640185
view FHAD1 146 35 57 42 0 0 0.566 0.136 0.221 0.163 0.000 0.000 chr1 15242223 15403328
view FHDC1 218 74 27 20 0 0 0.845 0.287 0.105 0.078 0.000 0.000 chr4 152931323 152984671
view FHIP1A 125 37 83 40 0 0 0.484 0.143 0.322 0.155 0.000 0.000 chr4 151404176 151675503
view FHIP1B 194 64 55 34 0 0 0.752 0.248 0.213 0.132 0.000 0.000 chr11 6206345 6239636
view FHIP2A 165 48 83 48 0 0 0.640 0.186 0.322 0.186 0.000 0.000 chr10 114816780 114869717
view FHIP2B 196 57 53 40 0 0 0.760 0.221 0.205 0.155 0.000 0.000 chr8 22084150 22109911
view FHIT 23 0 84 36 0 0 0.089 0.000 0.326 0.140 0.000 0.000 chr3 59742277 61256452
view FHL1 41 8 196 89 0 0 0.159 0.031 0.760 0.345 0.000 0.000 chrX 136142533 136216354