Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view FOXO4 83 17 169 82 0 0 0.322 0.066 0.655 0.318 0.000 0.000 chrX 71090851 71108532
view FOXP1 47 0 100 46 0 0 0.182 0.000 0.388 0.178 0.000 0.000 chr3 70949708 71588728
view FOXP2 86 12 94 58 0 0 0.333 0.047 0.364 0.225 0.000 0.000 chr7 114409815 114698765
view FOXP3 87 26 164 73 0 0 0.337 0.101 0.636 0.283 0.000 0.000 chrX 49245438 49269710
view FOXP4 177 49 59 43 0 0 0.686 0.190 0.229 0.167 0.000 0.000 chr6 41541381 41607384
view FOXQ1 202 66 50 33 0 0 0.783 0.256 0.194 0.128 0.000 0.000 chr6 1307098 1319758
view FOXR1 214 77 43 28 0 0 0.829 0.298 0.167 0.109 0.000 0.000 chr11 118966761 118986287
view FOXR2 100 34 153 68 1 0 0.388 0.132 0.593 0.264 0.004 0.000 chrX 55618400 55631192
view FOXRED1 194 62 56 37 1 0 0.752 0.240 0.217 0.143 0.004 0.000 chr11 126264154 126283126
view FOXRED2 159 51 88 45 0 0 0.616 0.198 0.341 0.174 0.000 0.000 chr22 36482190 36512040
view FOXS1 189 49 66 53 0 0 0.733 0.190 0.256 0.205 0.000 0.000 chr20 31839303 31850604
view FPGS 202 67 53 35 0 0 0.783 0.260 0.205 0.136 0.000 0.000 chr9 127797882 127819081
view FPGT 189 61 63 41 2 0 0.733 0.236 0.244 0.159 0.008 0.000 chr1 74193242 74213702
view FPR1 242 92 15 12 0 0 0.938 0.357 0.058 0.047 0.000 0.000 chr19 51740773 51756878
view FPR2 235 85 21 18 1 1 0.911 0.329 0.081 0.070 0.004 0.004 chr19 51756180 51775531
view FPR3 207 70 46 32 0 0 0.802 0.271 0.178 0.124 0.000 0.000 chr19 51790157 51831190
view FRA10AC1 181 64 69 36 0 0 0.702 0.248 0.267 0.140 0.000 0.000 chr10 93662883 93707592
view FRAS1 88 13 103 59 0 0 0.341 0.050 0.399 0.229 0.000 0.000 chr4 78052323 78549269
view FRAT1 214 74 43 30 0 0 0.829 0.287 0.167 0.116 0.000 0.000 chr10 97314271 97326915
view FRAT2 224 78 33 26 0 0 0.868 0.302 0.128 0.101 0.000 0.000 chr10 97327497 97339729
view FREM1 172 48 43 29 0 0 0.667 0.186 0.167 0.112 0.000 0.000 chr9 14732152 14915428
view FREM2 130 33 74 46 0 0 0.504 0.128 0.287 0.178 0.000 0.000 chr13 38682077 38892131
view FREM3 129 33 76 47 0 0 0.500 0.128 0.295 0.182 0.000 0.000 chr4 143572302 143705675
view FREY1 187 50 69 54 0 0 0.725 0.194 0.267 0.209 0.000 0.000 chr11 45901534 45912271
view FRG1 173 56 77 43 0 0 0.671 0.217 0.298 0.167 0.000 0.000 chr4 189935872 189968192
view FRG2B 210 72 41 31 4 0 0.814 0.279 0.159 0.120 0.016 0.000 chr10 133618895 133631795
view FRG2C 204 68 50 36 1 0 0.791 0.264 0.194 0.140 0.004 0.000 chr3 75659328 75672173
view FRG2 200 69 56 35 0 0 0.775 0.267 0.217 0.136 0.000 0.000 chr4 190019367 190032256
view FRK 136 38 89 50 0 0 0.527 0.147 0.345 0.194 0.000 0.000 chr6 115926149 116065891
view FRMD1 200 62 53 38 0 0 0.775 0.240 0.205 0.147 0.000 0.000 chr6 168048095 168084212
view FRMD3 120 30 72 43 0 0 0.465 0.116 0.279 0.167 0.000 0.000 chr9 83239622 83543401
view FRMD4A 67 6 85 48 0 0 0.260 0.023 0.329 0.186 0.000 0.000 chr10 13638706 14335924
view FRMD4B 111 20 76 50 0 0 0.430 0.078 0.295 0.194 0.000 0.000 chr3 69163782 69391088
view FRMD5 73 13 125 70 0 0 0.283 0.050 0.484 0.271 0.000 0.000 chr15 43865764 44200271
view FRMD6 194 70 54 31 0 0 0.752 0.271 0.209 0.120 0.000 0.000 chr14 51646910 51735727
view FRMD7 39 6 207 94 0 0 0.151 0.023 0.802 0.364 0.000 0.000 chrX 132071990 132133020
view FRMD8 182 60 69 38 0 0 0.705 0.233 0.267 0.147 0.000 0.000 chr11 65381637 65418525
view FRMPD1 166 55 62 34 0 0 0.643 0.213 0.240 0.132 0.000 0.000 chr9 37645954 37751904
view FRMPD2 124 19 99 65 0 0 0.481 0.074 0.384 0.252 0.000 0.000 chr10 48151562 48279696
view FRMPD3 29 1 203 86 0 0 0.112 0.004 0.787 0.333 0.000 0.000 chrX 107444652 107610251
view FRMPD4 28 1 169 73 0 0 0.109 0.004 0.655 0.283 0.000 0.000 chrX 12133473 12729523
view FRRS1L 214 82 34 17 0 0 0.829 0.318 0.132 0.066 0.000 0.000 chr9 109125293 109172249
view FRRS1 158 47 76 43 0 0 0.612 0.182 0.295 0.167 0.000 0.000 chr1 99698970 99771635
view FRS2 170 58 68 38 0 0 0.659 0.225 0.264 0.147 0.000 0.000 chr12 69465388 69584793
view FRS3 227 82 31 23 0 0 0.880 0.318 0.120 0.089 0.000 0.000 chr6 41765176 41784900
view FRYL 140 49 85 44 0 0 0.543 0.190 0.329 0.171 0.000 0.000 chr4 48492357 48785279
view FRY 117 29 68 42 0 0 0.453 0.112 0.264 0.163 0.000 0.000 chr13 32026774 32304125
view FRZB 184 62 66 38 0 0 0.713 0.240 0.256 0.147 0.000 0.000 chr2 182828275 182871637
view FSBP 213 78 42 25 0 0 0.826 0.302 0.163 0.097 0.000 0.000 chr8 94422716 94441944
view FSCB 222 80 36 25 0 0 0.860 0.310 0.140 0.097 0.000 0.000 chr14 44499149 44512283