Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view FXYD4 212 75 43 28 1 1 0.822 0.291 0.167 0.109 0.004 0.004 chr10 43366636 43381335
view FXYD5 230 83 26 20 0 0 0.891 0.322 0.101 0.078 0.000 0.000 chr19 35149735 35174881
view FXYD6 214 75 32 21 0 0 0.829 0.291 0.124 0.081 0.000 0.000 chr11 117831981 117881658
view FXYD7 221 75 30 23 0 0 0.857 0.291 0.116 0.089 0.000 0.000 chr19 35138255 35159302
view FYB1 162 56 50 27 0 0 0.628 0.217 0.194 0.105 0.000 0.000 chr5 39100252 39224563
view FYB2 189 64 48 30 0 0 0.733 0.248 0.186 0.116 0.000 0.000 chr1 56713789 56824404
view FYCO1 167 67 72 31 0 0 0.647 0.260 0.279 0.120 0.000 0.000 chr3 45912903 46000824
view FYN 116 37 103 53 0 0 0.450 0.143 0.399 0.205 0.000 0.000 chr6 111655332 111878452
view FYTTD1 127 25 108 65 0 0 0.492 0.097 0.419 0.252 0.000 0.000 chr3 197744883 197792596
view FZD10 224 77 31 25 0 0 0.868 0.298 0.120 0.097 0.000 0.000 chr12 130157464 130170740
view FZD1 207 73 46 28 1 1 0.802 0.283 0.178 0.109 0.004 0.004 chr7 91259433 91276326
view FZD2 197 62 54 37 0 0 0.764 0.240 0.209 0.143 0.000 0.000 chr17 44552484 44566262
view FZD3 163 58 76 41 0 0 0.632 0.225 0.295 0.159 0.000 0.000 chr8 28489212 28579258
view FZD4 227 91 30 13 0 0 0.880 0.353 0.116 0.050 0.000 0.000 chr11 86940679 86960395
view FZD5 220 75 32 24 1 1 0.853 0.291 0.124 0.093 0.004 0.004 chr2 207757598 207774906
view FZD6 182 58 68 40 0 0 0.705 0.225 0.264 0.155 0.000 0.000 chr8 103293898 103337866
view FZD7 209 74 47 29 0 0 0.810 0.287 0.182 0.112 0.000 0.000 chr2 202028855 202043441
view FZD8 201 73 55 30 0 0 0.779 0.283 0.213 0.116 0.000 0.000 chr10 35633247 35647296
view FZD9 182 59 71 42 0 0 0.705 0.229 0.275 0.163 0.000 0.000 chr7 73428778 73441120
view FZR1 156 34 91 62 0 0 0.605 0.132 0.353 0.240 0.000 0.000 chr19 3501311 3543334
view G0S2 211 81 44 22 1 0 0.818 0.314 0.171 0.085 0.004 0.000 chr1 209670412 209681390
view G2E3 177 70 66 32 0 0 0.686 0.271 0.256 0.124 0.000 0.000 chr14 30554158 30625064
view G3BP1 170 43 74 51 0 0 0.659 0.167 0.287 0.198 0.000 0.000 chr5 151766954 151817785
view G3BP2 164 45 81 52 0 0 0.636 0.174 0.314 0.202 0.000 0.000 chr4 75637786 75678411
view G6PC1 182 51 68 49 0 0 0.705 0.198 0.264 0.190 0.000 0.000 chr17 42895799 42919438
view G6PC2 212 75 44 28 0 0 0.822 0.291 0.171 0.109 0.000 0.000 chr2 168896291 168915000
view G6PC3 191 59 63 43 1 0 0.740 0.229 0.244 0.167 0.004 0.000 chr17 44065735 44081344
view G6PD 80 16 168 81 0 0 0.310 0.062 0.651 0.314 0.000 0.000 chrX 154526391 154551846
view GAA 207 67 47 35 1 1 0.802 0.260 0.182 0.136 0.004 0.004 chr17 80096581 80124881
view GAB1 96 8 121 83 0 0 0.372 0.031 0.469 0.322 0.000 0.000 chr4 143331876 143479565
view GAB2 143 47 91 43 0 0 0.554 0.182 0.353 0.167 0.000 0.000 chr11 78210293 78422820
view GAB3 65 13 176 83 0 0 0.252 0.050 0.682 0.322 0.000 0.000 chrX 154670249 154756077
view GAB4 214 74 35 24 0 0 0.829 0.287 0.136 0.093 0.000 0.000 chr22 16956936 17013222
view GABARAPL1 223 82 29 18 1 1 0.864 0.318 0.112 0.070 0.004 0.004 chr12 10207877 10228128
view GABARAPL2 183 59 69 43 0 0 0.709 0.229 0.267 0.167 0.000 0.000 chr16 75561379 75582881
view GABARAP 193 63 58 36 0 0 0.748 0.244 0.225 0.140 0.000 0.000 chr17 7235008 7247449
view GABBR1 203 68 47 30 0 0 0.787 0.264 0.182 0.116 0.000 0.000 chr6 29597238 29638183
view GABBR2 81 14 91 51 0 0 0.314 0.054 0.353 0.198 0.000 0.000 chr9 98283109 98713935
view GABPA 187 67 57 28 0 0 0.725 0.260 0.221 0.109 0.000 0.000 chr21 25729972 25777460
view GABPB1 183 62 57 33 0 0 0.709 0.240 0.221 0.128 0.000 0.000 chr15 50270389 50360198
view GABPB2 131 28 107 63 0 0 0.508 0.109 0.415 0.244 0.000 0.000 chr1 151065761 151130542
view GABRA1 196 71 49 26 0 0 0.760 0.275 0.190 0.101 0.000 0.000 chr5 161843120 161904971
view GABRA2 128 26 94 61 0 0 0.496 0.101 0.364 0.236 0.000 0.000 chr4 46238548 46395128
view GABRA3 41 6 174 78 0 0 0.159 0.023 0.674 0.302 0.000 0.000 chrX 152161234 152456315
view GABRA4 184 69 56 31 0 0 0.713 0.267 0.217 0.120 0.000 0.000 chr4 46913900 46998581
view GABRA5 187 60 49 33 0 0 0.725 0.233 0.190 0.128 0.000 0.000 chr15 26862062 26954208
view GABRA6 211 78 43 25 1 0 0.818 0.302 0.167 0.097 0.004 0.000 chr5 161680721 161707592
view GABRB1 78 15 94 55 0 0 0.302 0.058 0.364 0.213 0.000 0.000 chr4 47026567 47431447
view GABRB2 132 47 78 36 0 0 0.512 0.182 0.302 0.140 0.000 0.000 chr5 161283436 161551725
view GABRB3 101 18 79 49 0 0 0.391 0.070 0.306 0.190 0.000 0.000 chr15 26538552 26778066