Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view GRID2 17 2 118 53 0 0 0.066 0.008 0.457 0.205 0.000 0.000 chr4 92298966 93779566
view GRIFIN 189 57 60 42 2 0 0.733 0.221 0.233 0.163 0.008 0.000 chr7 2469728 2481398
view GRIK1 81 21 96 48 0 0 0.314 0.081 0.372 0.186 0.000 0.000 chr21 29531933 29944996
view GRIK2 58 13 91 42 0 0 0.225 0.050 0.353 0.163 0.000 0.000 chr6 101388708 102075083
view GRIK3 56 0 133 83 0 0 0.217 0.000 0.516 0.322 0.000 0.000 chr1 36790527 37039515
view GRIK4 63 8 79 43 0 0 0.244 0.031 0.306 0.167 0.000 0.000 chr11 120506748 120993906
view GRIK5 85 19 142 69 0 0 0.329 0.074 0.550 0.267 0.000 0.000 chr19 41993324 42075206
view GRIN1 148 23 81 60 0 0 0.574 0.089 0.314 0.233 0.000 0.000 chr9 137134154 137173756
view GRIN2A 83 11 85 58 0 0 0.322 0.043 0.329 0.225 0.000 0.000 chr16 9748408 10187428
view GRIN2B 96 11 71 37 0 0 0.372 0.043 0.275 0.143 0.000 0.000 chr12 13532337 13986602
view GRIN2C 179 53 66 41 0 0 0.694 0.205 0.256 0.159 0.000 0.000 chr17 74837023 74864885
view GRIN2D 182 55 57 37 0 0 0.705 0.213 0.221 0.143 0.000 0.000 chr19 48388668 48449931
view GRIN3A 161 48 66 40 0 0 0.624 0.186 0.256 0.155 0.000 0.000 chr9 101564352 101743647
view GRIN3B 222 76 30 23 0 0 0.860 0.295 0.116 0.089 0.000 0.000 chr19 995419 1014732
view GRINA 175 48 76 51 0 0 0.678 0.186 0.295 0.198 0.000 0.000 chr8 143985056 143998415
view GRIP1 111 25 67 39 0 0 0.430 0.097 0.260 0.151 0.000 0.000 chr12 66342431 66684076
view GRIP2 193 63 47 30 0 0 0.748 0.244 0.182 0.116 0.000 0.000 chr3 14484107 14545342
view GRIPAP1 85 19 162 75 0 0 0.329 0.074 0.628 0.291 0.000 0.000 chrX 48968723 49007264
view GRK1 0 0 0 0 0 0 0.000 0.000 0.000 0.000 0.000 0.000 chr13 113662219 113742736
view GRK2 150 42 96 54 0 0 0.581 0.163 0.372 0.209 0.000 0.000 chr11 67261473 67291556
view GRK3 87 12 117 68 0 0 0.337 0.047 0.453 0.264 0.000 0.000 chr22 25559675 25734294
view GRK4 133 32 85 49 0 0 0.516 0.124 0.329 0.190 0.000 0.000 chr4 2958571 3045760
view GRK5 100 14 78 42 0 0 0.388 0.054 0.302 0.163 0.000 0.000 chr10 119202571 119464745
view GRK6 190 55 58 44 0 0 0.736 0.213 0.225 0.171 0.000 0.000 chr5 177421676 177447891
view GRK7 178 55 65 39 0 0 0.690 0.213 0.252 0.151 0.000 0.000 chr3 141758408 141824352
view GRM1 78 12 104 52 0 0 0.302 0.047 0.403 0.202 0.000 0.000 chr6 146024062 146442601
view GRM2 165 45 66 36 0 0 0.640 0.174 0.256 0.140 0.000 0.000 chr3 51702068 51723613
view GRM3 107 27 108 57 0 0 0.415 0.105 0.419 0.221 0.000 0.000 chr7 86638909 86869879
view GRM4 140 35 75 46 0 0 0.543 0.136 0.291 0.178 0.000 0.000 chr6 34013643 34151087
view GRM5 91 26 85 43 0 0 0.353 0.101 0.329 0.167 0.000 0.000 chr11 88499642 89070982
view GRM6 233 83 21 18 0 0 0.903 0.322 0.081 0.070 0.000 0.000 chr5 178973327 179000320
view GRM7 40 1 93 40 0 0 0.155 0.004 0.360 0.155 0.000 0.000 chr3 6856115 7746533
view GRM8 54 3 101 57 0 0 0.209 0.012 0.391 0.221 0.000 0.000 chr7 126433598 127257941
view GRN 225 79 29 22 0 0 0.872 0.306 0.112 0.085 0.000 0.000 chr17 44340302 44358106
view GRPEL1 208 73 47 31 0 0 0.806 0.283 0.182 0.120 0.000 0.000 chr4 7053895 7073064
view GRPEL2 192 70 61 30 0 0 0.744 0.271 0.236 0.116 0.000 0.000 chr5 149340499 149359583
view GRPR 77 17 178 86 0 0 0.298 0.066 0.690 0.333 0.000 0.000 chrX 16118565 16158518
view GRP 203 68 45 27 0 0 0.787 0.264 0.174 0.105 0.000 0.000 chr18 59215158 59235771
view GRSF1 163 52 84 48 0 0 0.632 0.202 0.326 0.186 0.000 0.000 chr4 70810783 70844890
view GRTP1 143 34 60 35 0 0 0.554 0.132 0.233 0.136 0.000 0.000 chr13 113319163 113369130
view GRWD1 216 78 37 22 0 0 0.837 0.302 0.143 0.085 0.000 0.000 chr19 48440983 48462022
view GRXCR1 168 57 63 32 0 0 0.651 0.221 0.244 0.124 0.000 0.000 chr4 42887713 43035658
view GRXCR2 234 87 23 17 0 0 0.907 0.337 0.089 0.066 0.000 0.000 chr5 145853521 145878014
view GSAP 175 59 65 38 0 0 0.678 0.229 0.252 0.147 0.000 0.000 chr7 77305751 77421349
view GSC2 234 84 21 18 0 0 0.907 0.326 0.081 0.070 0.000 0.000 chr22 19141993 19155292
view GSC 226 82 28 19 1 1 0.876 0.318 0.109 0.074 0.004 0.004 chr14 94763223 94775113
view GSDMA 218 73 36 28 0 0 0.845 0.283 0.140 0.109 0.000 0.000 chr17 39958004 39982768
view GSDMB 199 71 55 32 1 1 0.771 0.275 0.213 0.124 0.004 0.004 chr17 39899595 39923635
view GSDMC 207 81 48 22 0 0 0.802 0.314 0.186 0.085 0.000 0.000 chr8 129743196 129791624
view GSDMD 208 67 41 29 0 0 0.806 0.260 0.159 0.112 0.000 0.000 chr8 143553346 143568062