Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
ANKRD24 177 50 59 41 0 0 0.686 0.194 0.229 0.159 0.000 0.000 chr19 4177689 4229814
ANKRD26 178 65 64 34 0 0 0.690 0.252 0.248 0.132 0.000 0.000 chr10 26999116 27105494
ANKRD27 173 56 57 34 0 0 0.671 0.217 0.221 0.132 0.000 0.000 chr19 32592006 32680180
ANKRD28 169 54 66 38 0 0 0.655 0.209 0.256 0.147 0.000 0.000 chr3 15662236 15802979
ANKRD29 175 61 64 38 0 0 0.678 0.236 0.248 0.147 0.000 0.000 chr18 23593926 23667911
ANKRD2 220 78 35 25 0 0 0.853 0.302 0.136 0.097 0.000 0.000 chr10 97567779 97588884
ANKRD30A 142 39 81 41 0 0 0.550 0.151 0.314 0.159 0.000 0.000 chr10 37120598 37237567
ANKRD30BL 202 78 54 25 0 0 0.783 0.302 0.209 0.097 0.000 0.000 chr2 132142591 132166952
ANKRD30B 157 50 79 44 0 0 0.609 0.194 0.306 0.171 0.000 0.000 chr18 14743172 14859667
ANKRD31 166 58 79 41 0 0 0.643 0.225 0.306 0.159 0.000 0.000 chr5 75063297 75241878
ANKRD33B 161 39 62 40 0 0 0.624 0.151 0.240 0.155 0.000 0.000 chr5 10559070 10662816
ANKRD33 224 81 31 22 2 1 0.868 0.314 0.120 0.085 0.008 0.004 chr12 51883103 51896727
ANKRD34A 194 65 61 38 0 0 0.752 0.252 0.236 0.147 0.000 0.000 chr1 145954441 145969575
ANKRD34B 195 56 56 42 0 0 0.756 0.217 0.217 0.163 0.000 0.000 chr5 80551755 80575280
ANKRD34C 214 75 40 26 0 0 0.829 0.291 0.155 0.101 0.000 0.000 chr15 79277722 79303239
ANKRD35 199 63 45 30 2 1 0.771 0.244 0.174 0.116 0.008 0.004 chr1 145861564 145890866
ANKRD36B 0 0 0 0 0 0 0.000 0.000 0.000 0.000 0.000 0.000 chr2 97487663 97594877
ANKRD36C 148 55 68 33 0 0 0.574 0.213 0.264 0.128 0.000 0.000 chr2 95844548 95996824
ANKRD36 105 26 104 51 0 0 0.407 0.101 0.403 0.198 0.000 0.000 chr2 97108153 97269521
ANKRD37 158 39 95 62 0 0 0.612 0.151 0.368 0.240 0.000 0.000 chr4 185391841 185405241
ANKRD39 156 37 87 56 0 0 0.605 0.143 0.337 0.217 0.000 0.000 chr2 96842990 96863016
ANKRD40CL 227 88 29 16 2 1 0.880 0.341 0.112 0.062 0.008 0.004 chr17 50756030 50772518
ANKRD40 194 70 58 31 0 0 0.752 0.271 0.225 0.120 0.000 0.000 chr17 50688198 50712914
ANKRD42 174 57 60 34 0 0 0.674 0.221 0.233 0.132 0.000 0.000 chr11 83188712 83253971
ANKRD44 56 3 131 79 0 0 0.217 0.012 0.508 0.306 0.000 0.000 chr2 196981662 197315780
ANKRD45 170 69 75 32 0 0 0.659 0.267 0.291 0.124 0.000 0.000 chr1 173603336 173674851
ANKRD46 199 64 52 36 0 0 0.771 0.248 0.202 0.140 0.000 0.000 chr8 100515772 100564759
ANKRD49 227 86 29 17 0 0 0.880 0.333 0.112 0.066 0.000 0.000 chr11 94488984 94504578
ANKRD50 190 63 56 33 0 0 0.736 0.244 0.217 0.128 0.000 0.000 chr4 124659048 124717732
ANKRD52 135 37 112 61 0 0 0.523 0.143 0.434 0.236 0.000 0.000 chr12 56232807 56263384
ANKRD53 224 82 32 21 1 1 0.868 0.318 0.124 0.081 0.004 0.004 chr2 70973630 70990499
ANKRD54 191 61 62 40 0 0 0.740 0.236 0.240 0.155 0.000 0.000 chr22 37825855 37849334
ANKRD55 153 39 72 44 0 0 0.593 0.151 0.279 0.171 0.000 0.000 chr5 56094680 56238330
ANKRD60 228 90 26 13 1 1 0.884 0.349 0.101 0.050 0.004 0.004 chr20 58211126 58233653
ANKRD61 222 80 34 23 0 0 0.860 0.310 0.132 0.089 0.000 0.000 chr7 6026376 6041552
ANKRD62 195 66 54 32 0 0 0.756 0.256 0.209 0.124 0.000 0.000 chr18 12088843 12134764
ANKRD63 204 71 53 33 0 0 0.791 0.275 0.205 0.128 0.000 0.000 chr15 40273372 40288064
ANKRD65 73 17 139 60 0 0 0.283 0.066 0.539 0.233 0.000 0.000 chr1 1413420 1426276
ANKRD66 200 65 52 37 1 1 0.775 0.252 0.202 0.143 0.004 0.004 chr6 46741933 46764506
ANKRD6 134 33 87 53 0 0 0.519 0.128 0.337 0.205 0.000 0.000 chr6 89428152 89638821
ANKRD7 202 77 55 27 1 1 0.783 0.298 0.213 0.105 0.004 0.004 chr7 118219704 118247732
ANKRD9 192 62 63 40 0 0 0.744 0.240 0.244 0.155 0.000 0.000 chr14 102496767 102514776
ANKS1A 159 59 66 30 0 0 0.616 0.229 0.256 0.116 0.000 0.000 chr6 34884255 35096406
ANKS1B 23 0 101 57 0 0 0.089 0.000 0.391 0.221 0.000 0.000 chr12 98738974 99989936
ANKS3 186 56 58 38 0 0 0.721 0.217 0.225 0.147 0.000 0.000 chr16 4691511 4739271
ANKS4B 212 78 38 20 1 1 0.822 0.302 0.147 0.078 0.004 0.004 chr16 21228699 21258850
ANKS6 173 58 66 38 0 0 0.671 0.225 0.256 0.147 0.000 0.000 chr9 98727009 98801555
ANKUB1 185 56 66 43 0 0 0.717 0.217 0.256 0.167 0.000 0.000 chr3 149756100 149797554
ANKZF1 187 53 64 46 0 0 0.725 0.205 0.248 0.178 0.000 0.000 chr2 219224806 219241679
ANLN 203 76 40 21 0 0 0.787 0.295 0.155 0.081 0.000 0.000 chr7 36384862 36458791