Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
IL1RAPL1 11 0 183 77 0 0 0.043 0.000 0.709 0.298 0.000 0.000 chrX 28582446 29961718
IL1RAPL2 10 0 189 75 0 0 0.039 0.000 0.733 0.291 0.000 0.000 chrX 104561199 105772829
IL1RAP 134 28 70 45 0 0 0.519 0.109 0.271 0.174 0.000 0.000 chr3 190509085 190656514
IL1RL1 173 64 67 27 0 0 0.671 0.248 0.260 0.105 0.000 0.000 chr2 102306563 102357037
IL1RL2 186 62 60 38 0 0 0.721 0.240 0.233 0.147 0.000 0.000 chr2 102182023 102245002
IL1RN 213 72 40 29 1 0 0.826 0.279 0.155 0.112 0.004 0.000 chr2 113122598 113139014
IL20RA 165 39 74 55 0 0 0.640 0.151 0.287 0.213 0.000 0.000 chr6 136994971 137049965
IL20RB 159 48 82 48 0 0 0.616 0.186 0.318 0.186 0.000 0.000 chr3 136952983 137016085
IL20 227 80 29 23 1 1 0.880 0.310 0.112 0.089 0.004 0.004 chr1 206860623 206874223
IL21R 185 52 60 42 0 0 0.717 0.202 0.233 0.163 0.000 0.000 chr16 27397174 27457042
IL21 213 84 42 18 1 1 0.826 0.326 0.163 0.070 0.004 0.004 chr4 122605108 122626066
IL22RA1 192 57 56 41 0 0 0.744 0.221 0.217 0.159 0.000 0.000 chr1 24114771 24148140
IL22RA2 213 78 43 26 0 0 0.826 0.302 0.167 0.101 0.000 0.000 chr6 137138820 137178644
IL22 222 82 34 23 0 0 0.860 0.318 0.132 0.089 0.000 0.000 chr12 68243242 68258604
IL23A 174 54 79 46 0 0 0.674 0.209 0.306 0.178 0.000 0.000 chr12 56333884 56345410
IL23R 145 44 82 43 0 0 0.562 0.171 0.318 0.167 0.000 0.000 chr1 67161454 67264979
IL24 190 69 65 35 2 0 0.736 0.267 0.252 0.136 0.008 0.000 chr1 206892443 206909139
IL25 211 72 41 28 0 0 0.818 0.279 0.159 0.109 0.000 0.000 chr14 23367809 23381403
IL26 200 63 45 31 1 1 0.775 0.244 0.174 0.120 0.004 0.004 chr12 68196349 68230810
IL27RA 200 67 47 31 0 0 0.775 0.260 0.182 0.120 0.000 0.000 chr19 14026762 14058218
IL27 196 63 56 37 1 1 0.760 0.244 0.217 0.143 0.004 0.004 chr16 28494362 28511834
IL2RA 206 73 41 26 0 0 0.798 0.283 0.159 0.101 0.000 0.000 chr10 6005689 6067367
IL2RB 226 81 27 19 0 0 0.876 0.314 0.105 0.074 0.000 0.000 chr22 37120843 37154916
IL2RG 79 20 169 79 3 0 0.306 0.078 0.655 0.306 0.012 0.000 chrX 71102404 71116577
IL2 216 84 39 18 1 1 0.837 0.326 0.151 0.070 0.004 0.004 chr4 122446470 122461725
IL31RA 160 48 69 41 0 0 0.620 0.186 0.267 0.159 0.000 0.000 chr5 55846357 55927850
IL31 184 54 68 47 0 0 0.713 0.209 0.264 0.182 0.000 0.000 chr12 122167029 122179221
IL32 228 81 26 20 0 0 0.884 0.314 0.101 0.078 0.000 0.000 chr16 3060640 3074530
IL33 180 53 65 44 0 0 0.698 0.205 0.252 0.171 0.000 0.000 chr9 6210807 6262983
IL34 218 76 30 20 0 0 0.845 0.295 0.116 0.078 0.000 0.000 chr16 70641559 70665682
IL36A 209 74 48 30 0 0 0.810 0.287 0.186 0.116 0.000 0.000 chr2 113000459 113013044
IL36B 201 69 44 26 0 0 0.779 0.267 0.171 0.101 0.000 0.000 chr2 113017089 113057867
IL36G 209 79 49 26 0 0 0.810 0.306 0.190 0.101 0.000 0.000 chr2 112973006 112990658
IL36RN 224 86 33 19 1 0 0.868 0.333 0.128 0.074 0.004 0.000 chr2 113054198 113069744
IL37 202 74 52 29 2 0 0.783 0.287 0.202 0.112 0.008 0.000 chr2 112906165 112923882
IL3RA 65 11 115 42 0 0 0.252 0.043 0.446 0.163 0.000 0.000 chrX 1331785 1387689
IL3 224 84 31 18 0 0 0.868 0.326 0.120 0.070 0.000 0.000 chr5 132055655 132068204
IL4I1 213 71 38 28 0 0 0.826 0.275 0.147 0.109 0.000 0.000 chr19 49884654 49901887
IL4R 165 48 71 41 0 0 0.640 0.186 0.275 0.159 0.000 0.000 chr16 27308974 27369778
IL4 210 82 42 20 2 0 0.814 0.318 0.163 0.078 0.008 0.000 chr5 132668989 132687678
IL5RA 226 82 19 13 0 0 0.876 0.318 0.074 0.050 0.000 0.000 chr3 3061324 3115374
IL5 216 84 42 21 0 0 0.837 0.326 0.163 0.081 0.000 0.000 chr5 132536445 132548522
IL6R 172 55 61 38 0 0 0.667 0.213 0.236 0.147 0.000 0.000 chr1 154400343 154474450
IL6ST 138 30 100 58 0 0 0.535 0.116 0.388 0.225 0.000 0.000 chr5 55930095 55999963
IL6 208 66 48 37 1 1 0.806 0.256 0.186 0.143 0.004 0.004 chr7 22722200 22736998
IL7R 204 72 46 29 0 0 0.791 0.279 0.178 0.112 0.000 0.000 chr5 35851891 35884603
IL7 131 33 109 60 0 0 0.508 0.128 0.422 0.233 0.000 0.000 chr8 78727772 78810463
IL9R 206 69 44 31 1 0 0.798 0.267 0.171 0.120 0.004 0.000 chrX 155992696 156015817
IL9 225 86 31 18 1 0 0.872 0.333 0.120 0.070 0.004 0.000 chr5 135887246 135900841
ILDR1 188 52 59 44 0 0 0.729 0.202 0.229 0.171 0.000 0.000 chr3 121982323 122027247