Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
KLHDC2 167 43 84 55 0 0 0.647 0.167 0.326 0.213 0.000 0.000 chr14 49763153 49791385
KLHDC3 158 47 95 55 0 0 0.612 0.182 0.368 0.213 0.000 0.000 chr6 43009249 43026294
KLHDC4 189 57 48 31 0 0 0.733 0.221 0.186 0.120 0.000 0.000 chr16 87702812 87770986
KLHDC7A 218 76 38 28 0 0 0.845 0.295 0.147 0.109 0.000 0.000 chr1 18475930 18490974
KLHDC7B 215 72 41 31 0 0 0.833 0.279 0.159 0.120 0.000 0.000 chr22 50540899 50556023
KLHDC8A 201 65 47 32 0 0 0.779 0.252 0.182 0.124 0.000 0.000 chr1 205331061 205361922
KLHDC8B 124 27 127 72 1 0 0.481 0.105 0.492 0.279 0.004 0.000 chr3 49166598 49181486
KLHDC9 200 71 58 34 0 0 0.775 0.275 0.225 0.132 0.000 0.000 chr1 161093361 161105346
KLHL10 196 63 59 40 0 0 0.760 0.244 0.229 0.155 0.000 0.000 chr17 41832825 41853384
KLHL11 182 54 68 45 0 0 0.705 0.209 0.264 0.174 0.000 0.000 chr17 41843518 41870423
KLHL12 178 65 67 31 0 0 0.690 0.252 0.260 0.120 0.000 0.000 chr1 202886120 202932234
KLHL13 38 2 199 90 0 0 0.147 0.008 0.771 0.349 0.000 0.000 chrX 117892813 118121810
KLHL14 101 11 115 75 0 0 0.391 0.043 0.446 0.291 0.000 0.000 chr18 32667673 32778023
KLHL15 79 23 166 72 0 0 0.306 0.089 0.643 0.279 0.000 0.000 chrX 23978720 24032186
KLHL17 215 68 36 30 0 0 0.833 0.264 0.140 0.116 0.000 0.000 chr1 955584 970719
KLHL18 168 59 74 36 0 0 0.651 0.229 0.287 0.140 0.000 0.000 chr3 47277944 47351816
KLHL1 90 14 92 54 0 0 0.349 0.054 0.357 0.209 0.000 0.000 chr13 69695597 70113452
KLHL20 154 55 93 43 0 0 0.597 0.213 0.360 0.167 0.000 0.000 chr1 173709981 173791692
KLHL21 210 70 42 31 1 0 0.814 0.271 0.163 0.120 0.004 0.000 chr1 6585724 6607869
KLHL22 169 59 65 34 0 0 0.655 0.229 0.252 0.132 0.000 0.000 chr22 20436519 20500795
KLHL23 199 64 55 37 0 0 0.771 0.248 0.213 0.143 0.000 0.000 chr2 169728832 169756878
KLHL24 155 51 81 44 0 0 0.601 0.198 0.314 0.171 0.000 0.000 chr3 183630623 183689519
KLHL25 202 65 44 31 0 0 0.783 0.252 0.171 0.120 0.000 0.000 chr15 85754326 85799925
KLHL26 168 47 76 48 0 0 0.651 0.182 0.295 0.186 0.000 0.000 chr19 18632028 18676721
KLHL28 111 30 126 65 0 0 0.430 0.116 0.488 0.252 0.000 0.000 chr14 44919324 44966947
KLHL29 79 9 102 61 0 0 0.306 0.035 0.395 0.236 0.000 0.000 chr2 23380179 23713606
KLHL2 126 33 116 66 0 0 0.488 0.128 0.450 0.256 0.000 0.000 chr4 165202561 165328147
KLHL30 224 80 32 24 1 0 0.868 0.310 0.124 0.093 0.004 0.000 chr2 238133668 238157947
KLHL31 209 75 44 25 0 0 0.810 0.291 0.171 0.097 0.000 0.000 chr6 53642916 53670756
KLHL32 121 38 72 37 0 0 0.469 0.147 0.279 0.143 0.000 0.000 chr6 96919728 97145753
KLHL33 239 90 17 13 1 1 0.926 0.349 0.066 0.050 0.004 0.004 chr14 20420852 20441166
KLHL34 66 16 189 89 1 0 0.256 0.062 0.733 0.345 0.004 0.000 chrX 21649690 21663330
KLHL35 209 65 41 32 0 0 0.810 0.252 0.159 0.124 0.000 0.000 chr11 75417394 75438203
KLHL36 223 83 29 18 0 0 0.864 0.322 0.112 0.070 0.000 0.000 chr16 84643511 84672686
KLHL38 222 85 33 18 1 0 0.860 0.329 0.128 0.070 0.004 0.000 chr8 123639442 123658801
KLHL3 125 19 97 67 0 0 0.484 0.074 0.376 0.260 0.000 0.000 chr5 137612500 137741089
KLHL40 218 72 36 29 0 0 0.845 0.279 0.140 0.112 0.000 0.000 chr3 42680537 42697544
KLHL41 210 83 41 17 0 0 0.814 0.322 0.159 0.066 0.000 0.000 chr2 169504702 169531258
KLHL42 209 70 42 29 0 0 0.810 0.271 0.163 0.112 0.000 0.000 chr12 27775233 27808040
KLHL4 65 16 174 80 0 0 0.252 0.062 0.674 0.310 0.000 0.000 chrX 87512802 87675050
KLHL5 151 53 91 47 0 0 0.585 0.205 0.353 0.182 0.000 0.000 chr4 39057232 39131233
KLHL6 148 43 80 47 0 0 0.574 0.167 0.310 0.182 0.000 0.000 chr3 183482551 183560706
KLHL7 163 57 80 38 0 0 0.632 0.221 0.310 0.147 0.000 0.000 chr7 23100785 23182914
KLHL8 181 58 59 38 0 0 0.702 0.225 0.229 0.147 0.000 0.000 chr4 87155103 87225618
KLHL9 215 77 40 25 0 0 0.833 0.298 0.155 0.097 0.000 0.000 chr9 21324665 21340404
KLK10 224 82 34 23 0 0 0.868 0.318 0.132 0.089 0.000 0.000 chr19 51007739 51024709
KLK11 227 78 27 23 1 1 0.880 0.302 0.105 0.089 0.004 0.004 chr19 51017236 51031616
KLK12 223 77 31 24 0 0 0.864 0.298 0.120 0.093 0.000 0.000 chr19 51024094 51040002
KLK13 229 81 27 22 0 0 0.888 0.314 0.105 0.085 0.000 0.000 chr19 51050626 51070092
KLK14 221 76 34 26 0 0 0.857 0.295 0.132 0.101 0.000 0.000 chr19 51072897 51087887