Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
MAST1 157 47 84 48 0 0 0.609 0.182 0.326 0.186 0.000 0.000 chr19 12833515 12879952
MAST2 143 37 86 54 0 0 0.554 0.143 0.333 0.209 0.000 0.000 chr1 45798612 46041122
MAST3 147 37 89 53 0 0 0.570 0.143 0.345 0.205 0.000 0.000 chr19 18092778 18156687
MAST4 53 2 98 54 0 0 0.205 0.008 0.380 0.209 0.000 0.000 chr5 66591393 67174593
MASTL 198 79 52 19 0 0 0.767 0.306 0.202 0.074 0.000 0.000 chr10 27150352 27192953
MAT1A 185 53 63 46 0 0 0.717 0.205 0.244 0.178 0.000 0.000 chr10 80266820 80294658
MAT2A 208 73 46 30 1 0 0.806 0.283 0.178 0.116 0.004 0.000 chr2 85534168 85550281
MAT2B 184 56 67 42 0 0 0.713 0.217 0.260 0.163 0.000 0.000 chr5 163500619 163524354
MATCAP1 153 36 98 62 0 0 0.593 0.140 0.380 0.240 0.000 0.000 chr16 67170599 67188963
MATCAP2 193 72 53 24 0 0 0.748 0.279 0.205 0.093 0.000 0.000 chr7 36319152 36372240
MATK 216 73 33 23 0 0 0.837 0.283 0.128 0.089 0.000 0.000 chr19 3772973 3791381
MATN1 219 79 36 24 1 1 0.849 0.306 0.140 0.093 0.004 0.004 chr1 30706277 30728585
MATN2 158 51 59 35 0 0 0.612 0.198 0.229 0.136 0.000 0.000 chr8 97864064 98041724
MATN3 215 75 36 23 0 0 0.833 0.291 0.140 0.089 0.000 0.000 chr2 19987052 20017668
MATN4 210 73 43 29 0 0 0.814 0.283 0.167 0.112 0.000 0.000 chr20 45288450 45313299
MATR3 140 46 109 52 0 0 0.543 0.178 0.422 0.202 0.000 0.000 chr5 139288740 139336677
MAU2 171 46 61 42 0 0 0.663 0.178 0.236 0.163 0.000 0.000 chr19 19315829 19363754
MAVS 209 77 37 18 0 0 0.810 0.298 0.143 0.070 0.000 0.000 chr20 3841834 3881118
MAX 190 67 64 36 1 1 0.736 0.260 0.248 0.140 0.004 0.004 chr14 65070127 65107517
MAZ 140 35 111 64 0 0 0.543 0.136 0.430 0.248 0.000 0.000 chr16 29801529 29816164
MB21D2 148 40 69 44 0 0 0.574 0.155 0.267 0.171 0.000 0.000 chr3 192791815 192922856
MBD1 200 67 56 37 1 0 0.775 0.260 0.217 0.143 0.004 0.000 chr18 50263846 50286523
MBD2 149 40 96 57 0 0 0.578 0.155 0.372 0.221 0.000 0.000 chr18 54146606 54229669
MBD3L1 213 72 41 29 0 0 0.826 0.279 0.159 0.112 0.000 0.000 chr19 8827377 8848319
MBD3L2B 175 58 74 40 1 1 0.678 0.225 0.287 0.155 0.004 0.004 chr19 7013969 7026431
MBD3L2 128 45 79 40 21 7 0.496 0.174 0.306 0.155 0.081 0.027 chr19 7044321 7056735
MBD3L3 144 52 75 37 0 0 0.558 0.202 0.291 0.143 0.000 0.000 chr19 7051207 7063676
MBD3L4 131 40 89 44 7 3 0.508 0.155 0.345 0.171 0.027 0.012 chr19 7032749 7045179
MBD3L5 124 43 81 33 15 4 0.481 0.167 0.314 0.128 0.058 0.016 chr19 7025578 7038011
MBD3 199 62 55 39 0 0 0.771 0.240 0.213 0.151 0.000 0.000 chr19 1568596 1597865
MBD4 205 67 48 34 2 1 0.795 0.260 0.186 0.132 0.008 0.004 chr3 129425947 129444948
MBD5 93 23 91 50 0 0 0.360 0.089 0.353 0.194 0.000 0.000 chr2 148016091 148521971
MBD6 169 54 82 45 0 0 0.655 0.209 0.318 0.174 0.000 0.000 chr12 57517824 57535148
MBIP 155 41 90 52 0 0 0.601 0.159 0.349 0.202 0.000 0.000 chr14 36293564 36325637
MBL2 216 78 41 27 1 0 0.837 0.302 0.159 0.105 0.004 0.000 chr10 52760380 52777784
MBLAC1 194 62 60 39 1 1 0.752 0.240 0.233 0.151 0.004 0.004 chr7 100121967 100133495
MBLAC2 188 63 63 35 0 0 0.729 0.244 0.244 0.136 0.000 0.000 chr5 90453209 90479771
MBNL1 168 52 64 38 0 0 0.651 0.202 0.248 0.147 0.000 0.000 chr3 152263929 152470780
MBNL2 126 22 73 51 0 0 0.488 0.085 0.283 0.198 0.000 0.000 chr13 97217333 97399120
MBNL3 30 2 199 92 0 0 0.116 0.008 0.771 0.357 0.000 0.000 chrX 132364320 132494038
MBOAT1 167 46 45 33 0 0 0.647 0.178 0.174 0.128 0.000 0.000 chr6 20094684 20217469
MBOAT2 80 7 141 88 0 0 0.310 0.027 0.547 0.341 0.000 0.000 chr2 8847690 9008684
MBOAT4 189 66 61 36 0 0 0.733 0.256 0.236 0.140 0.000 0.000 chr8 30126671 30149665
MBOAT7 186 48 57 43 0 0 0.721 0.186 0.221 0.167 0.000 0.000 chr19 54168415 54194580
MBP 197 66 30 20 0 0 0.764 0.256 0.116 0.078 0.000 0.000 chr18 76973833 77137783
MBTD1 169 49 76 52 0 0 0.655 0.190 0.295 0.202 0.000 0.000 chr17 51172425 51265049
MBTPS1 211 81 36 18 0 0 0.818 0.314 0.140 0.070 0.000 0.000 chr16 84048763 84121942
MBTPS2 90 29 160 70 0 0 0.349 0.112 0.620 0.271 0.000 0.000 chrX 21834617 21890423
MB 187 65 67 37 0 0 0.725 0.252 0.260 0.143 0.000 0.000 chr22 35601764 35622329
MC1R 197 55 54 44 1 1 0.764 0.213 0.209 0.171 0.004 0.004 chr16 89913862 89925972