Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
MGAM2 164 56 63 34 0 0 0.636 0.217 0.244 0.132 0.000 0.000 chr7 142106718 142227324
MGAM 157 48 61 34 0 0 0.609 0.186 0.236 0.132 0.000 0.000 chr7 141990879 142111747
MGARP 181 58 70 43 1 0 0.702 0.225 0.271 0.167 0.004 0.000 chr4 139261165 139285225
MGAT1 217 74 39 30 1 0 0.841 0.287 0.151 0.116 0.004 0.000 chr5 180779780 180807806
MGAT2 177 48 78 54 0 0 0.686 0.186 0.302 0.209 0.000 0.000 chr14 49615799 49628481
MGAT3 152 21 90 71 0 0 0.589 0.081 0.349 0.275 0.000 0.000 chr22 39452012 39497194
MGAT4A 130 35 96 52 0 0 0.504 0.136 0.372 0.202 0.000 0.000 chr2 98614106 98736132
MGAT4B 205 68 47 32 1 1 0.795 0.264 0.182 0.124 0.004 0.004 chr5 179792610 179811866
MGAT4C 93 19 103 57 0 0 0.360 0.074 0.399 0.221 0.000 0.000 chr12 85950667 86261391
MGAT4D 165 55 80 45 0 0 0.640 0.213 0.310 0.174 0.000 0.000 chr4 140437262 140503293
MGAT5B 138 27 75 40 0 0 0.535 0.105 0.291 0.155 0.000 0.000 chr17 76863404 76955393
MGAT5 140 37 70 44 0 0 0.543 0.143 0.271 0.171 0.000 0.000 chr2 134249072 134459621
MGA 145 36 90 55 0 0 0.562 0.140 0.349 0.213 0.000 0.000 chr15 41655405 41774940
MGLL 156 50 57 33 0 0 0.605 0.194 0.221 0.128 0.000 0.000 chr3 127684066 127827515
MGME1 200 72 53 29 0 0 0.775 0.279 0.205 0.112 0.000 0.000 chr20 17964018 17996122
MGMT 96 15 77 40 0 0 0.372 0.058 0.298 0.155 0.000 0.000 chr10 129462241 129775983
MGP 198 72 60 33 0 0 0.767 0.279 0.233 0.128 0.000 0.000 chr12 14875864 14890854
MGRN1 166 46 61 38 0 0 0.643 0.178 0.236 0.147 0.000 0.000 chr16 4619826 4695972
MGST1 230 89 24 12 0 0 0.891 0.345 0.093 0.047 0.000 0.000 chr12 16342645 16369410
MGST2 219 83 29 15 0 0 0.849 0.322 0.112 0.058 0.000 0.000 chr4 139660819 139709243
MGST3 172 41 74 54 0 0 0.667 0.159 0.287 0.209 0.000 0.000 chr1 165626234 165661136
MIA2 183 63 57 35 0 0 0.709 0.244 0.221 0.136 0.000 0.000 chr14 39228915 39355694
MIA3 184 60 65 43 0 0 0.713 0.233 0.252 0.167 0.000 0.000 chr1 222613097 222673007
MIA 201 73 53 28 0 0 0.779 0.283 0.205 0.109 0.000 0.000 chr19 40770521 40782490
MIB1 153 45 76 44 0 0 0.593 0.174 0.295 0.171 0.000 0.000 chr18 21735792 21875953
MIB2 205 68 45 31 0 0 0.795 0.264 0.174 0.120 0.000 0.000 chr1 1610500 1635605
MICAL1 216 80 40 23 0 0 0.837 0.310 0.155 0.089 0.000 0.000 chr6 109439062 109460772
MICAL2 178 56 36 22 0 0 0.690 0.217 0.140 0.085 0.000 0.000 chr11 12105590 12268785
MICAL3 136 30 63 41 0 0 0.527 0.116 0.244 0.159 0.000 0.000 chr22 17782649 18029561
MICALL1 174 50 63 42 0 0 0.674 0.194 0.244 0.163 0.000 0.000 chr22 37901297 37947822
MICALL2 139 20 78 51 0 0 0.539 0.078 0.302 0.198 0.000 0.000 chr7 1429359 1464470
MICA 219 84 37 20 1 1 0.849 0.326 0.143 0.078 0.004 0.004 chr6 31398595 31420315
MICB 229 84 26 18 0 0 0.888 0.326 0.101 0.070 0.000 0.000 chr6 31493145 31516124
MICOS10 173 49 78 49 0 0 0.671 0.190 0.302 0.190 0.000 0.000 chr1 19591979 19634820
MICOS13 190 53 61 45 0 0 0.736 0.205 0.236 0.174 0.000 0.000 chr19 5673422 5685516
MICU1 103 12 111 71 0 0 0.399 0.047 0.430 0.275 0.000 0.000 chr10 72362340 72631079
MICU2 157 41 87 55 0 0 0.609 0.159 0.337 0.213 0.000 0.000 chr13 21487691 21609170
MICU3 186 65 44 23 0 0 0.721 0.252 0.171 0.089 0.000 0.000 chr8 17022238 17127642
MID1IP1 98 36 158 67 0 0 0.380 0.140 0.612 0.260 0.000 0.000 chrX 38796459 38811532
MID1 19 0 210 91 0 0 0.074 0.000 0.814 0.353 0.000 0.000 chrX 10440556 10625585
MID2 37 4 178 73 0 0 0.143 0.016 0.690 0.283 0.000 0.000 chrX 107820866 107936637
MIDEAS 175 42 75 56 0 0 0.678 0.163 0.291 0.217 0.000 0.000 chr14 73710122 73765303
MIDN 208 62 39 32 0 0 0.806 0.240 0.151 0.124 0.000 0.000 chr19 1243583 1264143
MIEF1 199 60 54 40 1 1 0.771 0.233 0.209 0.155 0.004 0.004 chr22 39497290 39523132
MIEF2 208 71 48 32 0 0 0.806 0.275 0.186 0.124 0.000 0.000 chr17 18255662 18271552
MIEN1 181 60 74 42 0 0 0.702 0.233 0.287 0.163 0.000 0.000 chr17 39723510 39735532
MIER1 123 29 118 67 0 0 0.477 0.112 0.457 0.260 0.000 0.000 chr1 66919990 66993619
MIER2 191 55 51 37 0 0 0.740 0.213 0.198 0.143 0.000 0.000 chr19 300573 349796
MIER3 196 72 53 28 1 1 0.760 0.279 0.205 0.109 0.004 0.004 chr5 56914603 56957123
MIF4GD 167 38 86 62 0 0 0.647 0.147 0.333 0.240 0.000 0.000 chr17 75261228 75276231