Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
MRPL45 143 39 101 54 0 0 0.554 0.151 0.391 0.209 0.000 0.000 chr17 38292168 38328211
MRPL46 145 29 106 70 0 0 0.562 0.112 0.411 0.271 0.000 0.000 chr15 88454478 88472388
MRPL47 193 69 62 34 0 0 0.748 0.267 0.240 0.132 0.000 0.000 chr3 179583285 179609638
MRPL48 167 52 78 44 0 0 0.647 0.202 0.302 0.171 0.000 0.000 chr11 73782874 73870133
MRPL49 198 63 53 36 0 0 0.767 0.244 0.205 0.140 0.000 0.000 chr11 65117321 65132371
MRPL4 207 72 49 31 0 0 0.802 0.279 0.190 0.120 0.000 0.000 chr19 10247214 10265055
MRPL50 231 91 26 13 0 0 0.895 0.353 0.101 0.050 0.000 0.000 chr9 101382633 101403618
MRPL51 217 78 37 23 0 0 0.841 0.302 0.143 0.089 0.000 0.000 chr12 6486886 6498262
MRPL52 228 82 28 21 0 0 0.884 0.318 0.109 0.081 0.000 0.000 chr14 22824887 22840037
MRPL53 191 65 63 37 0 0 0.740 0.252 0.244 0.143 0.000 0.000 chr2 74466982 74477680
MRPL54 216 72 41 32 0 0 0.837 0.279 0.159 0.124 0.000 0.000 chr19 3757682 3772565
MRPL55 201 71 51 30 1 0 0.779 0.275 0.198 0.116 0.004 0.000 chr1 228101685 228114299
MRPL57 205 68 52 36 0 0 0.795 0.264 0.202 0.140 0.000 0.000 chr13 21171658 21184084
MRPL58 193 58 57 40 0 0 0.748 0.225 0.221 0.155 0.000 0.000 chr17 75007670 75026261
MRPL9 217 75 38 27 1 1 0.841 0.291 0.147 0.105 0.004 0.004 chr1 151754647 151768496
MRPS10 201 68 54 34 0 0 0.779 0.264 0.209 0.132 0.000 0.000 chr6 42201807 42222861
MRPS11 121 16 124 80 0 0 0.469 0.062 0.481 0.310 0.000 0.000 chr15 88462708 88485776
MRPS12 208 66 48 37 0 0 0.806 0.256 0.186 0.143 0.000 0.000 chr19 38925944 38938168
MRPS14 198 72 57 32 0 0 0.767 0.279 0.221 0.124 0.000 0.000 chr1 175007958 175028425
MRPS15 213 82 42 21 0 0 0.826 0.318 0.163 0.081 0.000 0.000 chr1 36450718 36469384
MRPS16 171 66 85 38 1 0 0.663 0.256 0.329 0.147 0.004 0.000 chr10 73243849 73257644
MRPS17 211 75 42 26 1 0 0.818 0.291 0.163 0.101 0.004 0.000 chr7 55946877 55961500
MRPS18A 189 71 64 30 0 0 0.733 0.275 0.248 0.116 0.000 0.000 chr6 43666202 43692791
MRPS18B 211 69 45 34 0 0 0.818 0.267 0.174 0.132 0.000 0.000 chr6 30612840 30631392
MRPS18C 196 67 61 37 0 0 0.760 0.260 0.236 0.143 0.000 0.000 chr4 83451058 83467298
MRPS21 192 64 57 34 0 0 0.744 0.248 0.221 0.132 0.000 0.000 chr1 150288861 150313979
MRPS22 154 38 97 62 0 0 0.597 0.147 0.376 0.240 0.000 0.000 chr3 139339020 139362129
MRPS23 197 70 54 28 0 0 0.764 0.271 0.209 0.109 0.000 0.000 chr17 57829781 57855044
MRPS24 214 74 44 31 0 0 0.829 0.287 0.171 0.120 0.000 0.000 chr7 43861558 43874517
MRPS25 183 53 66 45 0 0 0.709 0.205 0.256 0.174 0.000 0.000 chr3 15043512 15070315
MRPS26 218 80 36 22 2 1 0.845 0.310 0.140 0.085 0.008 0.004 chr20 3041052 3053250
MRPS27 172 57 76 43 0 0 0.667 0.221 0.295 0.167 0.000 0.000 chr5 72214403 72325240
MRPS28 149 40 88 53 0 0 0.578 0.155 0.341 0.205 0.000 0.000 chr8 79913717 80035259
MRPS2 202 60 52 41 1 1 0.783 0.233 0.202 0.159 0.004 0.004 chr9 135495682 135509671
MRPS30 196 68 59 34 0 0 0.760 0.264 0.229 0.132 0.000 0.000 chr5 44803947 44820514
MRPS31 201 77 48 24 0 0 0.779 0.298 0.186 0.093 0.000 0.000 chr13 40724128 40776190
MRPS33 169 48 83 52 0 0 0.655 0.186 0.322 0.202 0.000 0.000 chr7 140997610 141019952
MRPS34 217 73 35 27 0 0 0.841 0.283 0.136 0.105 0.000 0.000 chr16 1766895 1778134
MRPS35 178 66 64 32 0 0 0.690 0.256 0.248 0.124 0.000 0.000 chr12 27705832 27761295
MRPS36 204 73 46 28 1 1 0.791 0.283 0.178 0.109 0.004 0.004 chr5 69212760 69235158
MRPS5 144 46 95 51 0 0 0.558 0.178 0.368 0.198 0.000 0.000 chr2 95080369 95126808
MRPS6 147 39 84 53 0 0 0.570 0.151 0.326 0.205 0.000 0.000 chr21 34068578 34148030
MRPS7 172 39 80 61 0 0 0.667 0.151 0.310 0.236 0.000 0.000 chr17 75256879 75271376
MRPS9 196 73 54 26 0 0 0.760 0.283 0.209 0.101 0.000 0.000 chr2 105033069 105104960
MRRF 131 49 95 41 0 0 0.508 0.190 0.368 0.159 0.000 0.000 chr9 122259882 122336337
MRS2 215 78 39 24 0 0 0.833 0.302 0.151 0.093 0.000 0.000 chr6 24397936 24431190
MRTFA 127 38 92 55 0 0 0.492 0.147 0.357 0.213 0.000 0.000 chr22 40405289 40641719
MRTFB 119 39 110 54 0 0 0.461 0.151 0.426 0.209 0.000 0.000 chr16 14066319 14271773
MRTO4 198 58 53 40 0 0 0.767 0.225 0.205 0.155 0.000 0.000 chr1 19246805 19265128
MS4A10 215 77 39 24 0 0 0.833 0.298 0.151 0.093 0.000 0.000 chr11 60780333 60806305