Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view ASPHD2 213 81 41 23 0 0 0.826 0.314 0.159 0.089 0.000 0.000 chr22 26424260 26450015
view ASPH 128 35 74 45 0 0 0.496 0.136 0.287 0.174 0.000 0.000 chr8 61495556 61719592
view ASPM 147 45 99 55 0 0 0.570 0.174 0.384 0.213 0.000 0.000 chr1 197079127 197151669
view ASPRV1 231 86 26 18 0 0 0.895 0.333 0.101 0.070 0.000 0.000 chr2 69955089 69966631
view ASPSCR1 182 55 62 39 0 0 0.705 0.213 0.240 0.151 0.000 0.000 chr17 81972629 82022406
view ASRGL1 184 62 57 33 0 0 0.713 0.240 0.221 0.128 0.000 0.000 chr11 62332448 62398412
view ASS1 186 52 48 32 0 0 0.721 0.202 0.186 0.124 0.000 0.000 chr9 130439961 130506274
view ASTE1 201 76 53 27 0 0 0.779 0.295 0.205 0.105 0.000 0.000 chr3 131008875 131031825
view ASTL 197 68 57 34 0 0 0.764 0.264 0.221 0.132 0.000 0.000 chr2 96117818 96143502
view ASTN1 55 5 117 69 0 0 0.213 0.019 0.453 0.267 0.000 0.000 chr1 176856067 177169712
view ASTN2 50 6 89 46 0 0 0.194 0.023 0.345 0.178 0.000 0.000 chr9 116418112 117420057
view ASXL1 140 40 102 54 0 0 0.543 0.155 0.395 0.209 0.000 0.000 chr20 32353331 32444319
view ASXL2 110 14 132 80 0 0 0.426 0.054 0.512 0.310 0.000 0.000 chr2 25728753 25883487
view ASXL3 109 23 112 63 0 0 0.422 0.089 0.434 0.244 0.000 0.000 chr18 33573219 33756195
view ASZ1 152 53 94 48 0 0 0.589 0.205 0.364 0.186 0.000 0.000 chr7 117358222 117432493
view ATAD1 179 64 55 27 0 0 0.694 0.248 0.213 0.105 0.000 0.000 chr10 87746512 87823226
view ATAD2B 122 25 112 70 0 0 0.473 0.097 0.434 0.271 0.000 0.000 chr2 23743664 23932123
view ATAD2 138 29 90 58 0 0 0.535 0.112 0.349 0.225 0.000 0.000 chr8 123314850 123401447
view ATAD3A 210 63 39 34 0 0 0.814 0.244 0.151 0.132 0.000 0.000 chr1 1507162 1539685
view ATAD3B 137 35 97 54 0 0 0.531 0.136 0.376 0.209 0.000 0.000 chr1 1466765 1502848
view ATAD3C 204 69 37 23 1 0 0.791 0.267 0.143 0.089 0.004 0.000 chr1 1444689 1475163
view ATAD5 142 36 99 63 0 0 0.550 0.140 0.384 0.244 0.000 0.000 chr17 30826966 30900869
view ATAT1 202 67 52 36 0 0 0.783 0.260 0.202 0.140 0.000 0.000 chr6 30621874 30651821
view ATCAY 191 54 45 34 0 0 0.740 0.209 0.174 0.132 0.000 0.000 chr19 3875685 3933082
view ATE1 159 51 57 35 0 0 0.616 0.198 0.221 0.136 0.000 0.000 chr10 121735424 121933031
view ATF1 190 67 62 33 1 1 0.736 0.260 0.240 0.128 0.004 0.004 chr12 50759101 50826162
view ATF2 111 35 114 55 0 0 0.430 0.136 0.442 0.213 0.000 0.000 chr2 175067259 175173203
view ATF3 224 86 31 16 0 0 0.868 0.333 0.120 0.062 0.000 0.000 chr1 212603761 212625775
view ATF4 176 48 77 53 1 0 0.682 0.186 0.298 0.205 0.004 0.000 chr22 39515562 39527683
view ATF5 221 79 33 22 1 1 0.857 0.306 0.128 0.085 0.004 0.004 chr19 49924205 49938935
view ATF6B 219 77 33 22 0 0 0.849 0.298 0.128 0.085 0.000 0.000 chr6 32110264 32133246
view ATF6 165 60 72 36 0 0 0.640 0.233 0.279 0.140 0.000 0.000 chr1 161761320 161969070
view ATF7IP2 187 70 56 25 0 0 0.725 0.271 0.217 0.097 0.000 0.000 chr16 10381061 10488638
view ATF7IP 172 53 67 39 0 0 0.667 0.205 0.260 0.151 0.000 0.000 chr12 14360682 14507930
view ATF7 164 47 82 50 0 0 0.636 0.182 0.318 0.194 0.000 0.000 chr12 53507054 53631382
view ATG101 196 67 60 36 0 0 0.760 0.260 0.233 0.140 0.000 0.000 chr12 52064978 52082495
view ATG10 112 14 116 78 0 0 0.434 0.054 0.450 0.302 0.000 0.000 chr5 81967023 82261133
view ATG12 200 69 55 34 1 1 0.775 0.267 0.213 0.132 0.004 0.004 chr5 115823200 115846565
view ATG13 108 18 119 70 0 0 0.419 0.070 0.461 0.271 0.000 0.000 chr11 46612553 46679518
view ATG14 182 65 65 32 0 0 0.705 0.252 0.252 0.124 0.000 0.000 chr14 55361391 55416830
view ATG16L1 176 60 72 38 0 0 0.682 0.233 0.279 0.147 0.000 0.000 chr2 233246673 233300669
view ATG16L2 219 77 34 24 1 0 0.849 0.298 0.132 0.093 0.004 0.000 chr11 72809411 72834635
view ATG2A 185 65 59 29 0 0 0.717 0.252 0.229 0.112 0.000 0.000 chr11 64889546 64922209
view ATG2B 177 57 64 39 0 0 0.686 0.221 0.248 0.151 0.000 0.000 chr14 96274195 96368341
view ATG3 187 68 60 32 0 0 0.725 0.264 0.233 0.124 0.000 0.000 chr3 112527510 112566962
view ATG4A 59 7 187 91 0 0 0.229 0.027 0.725 0.353 0.000 0.000 chrX 108086778 108159671
view ATG4B 204 77 42 21 0 0 0.791 0.298 0.163 0.081 0.000 0.000 chr2 241632693 241678857
view ATG4C 160 46 80 48 0 0 0.620 0.178 0.310 0.186 0.000 0.000 chr1 62779132 62870516
view ATG4D 202 67 55 37 0 0 0.783 0.260 0.213 0.143 0.000 0.000 chr19 10538904 10558418
view ATG5 178 72 69 31 0 0 0.690 0.279 0.267 0.120 0.000 0.000 chr6 106179476 106330760