Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view ABITRAM 228 90 30 15 0 0 0.884 0.349 0.116 0.058 0.000 0.000 chr9 108929400 108945954
view ABL1 138 30 97 60 0 0 0.535 0.116 0.376 0.233 0.000 0.000 chr9 130830254 130892675
view ABL2 174 60 65 34 0 0 0.674 0.233 0.252 0.132 0.000 0.000 chr1 179094330 179234677
view ABLIM1 127 30 65 38 0 0 0.492 0.116 0.252 0.147 0.000 0.000 chr10 114426112 114663275
view ABLIM2 160 35 46 33 0 0 0.620 0.136 0.178 0.128 0.000 0.000 chr4 7960327 8163813
view ABLIM3 128 42 75 39 0 0 0.496 0.163 0.291 0.151 0.000 0.000 chr5 149136493 149265542
view ABRACL 223 86 28 12 0 0 0.864 0.333 0.109 0.047 0.000 0.000 chr6 139023745 139048302
view ABRAXAS1 177 58 75 44 0 0 0.686 0.225 0.291 0.171 0.000 0.000 chr4 83454517 83490100
view ABRAXAS2 174 57 72 40 0 0 0.674 0.221 0.279 0.155 0.000 0.000 chr10 124796819 124841667
view ABRA 219 79 36 24 0 0 0.849 0.306 0.140 0.093 0.000 0.000 chr8 106754483 106775244
view ABR 168 41 43 29 0 0 0.651 0.159 0.167 0.112 0.000 0.000 chr17 998519 1184981
view ABT1 204 73 50 30 2 1 0.791 0.283 0.194 0.116 0.008 0.004 chr6 26591953 26605739
view ABTB1 219 75 35 26 0 0 0.849 0.291 0.136 0.101 0.000 0.000 chr3 127667952 127685926
view ABTB2 122 31 72 40 0 0 0.473 0.120 0.279 0.155 0.000 0.000 chr11 34145987 34363010
view ABTB3 93 17 66 40 0 0 0.360 0.066 0.256 0.155 0.000 0.000 chr12 107313434 107664642
view ACAA1 185 61 70 41 0 0 0.717 0.236 0.271 0.159 0.000 0.000 chr3 38117715 38142127
view ACAA2 216 77 38 24 0 0 0.837 0.298 0.147 0.093 0.000 0.000 chr18 49777164 49818533
view ACACA 149 40 70 38 0 0 0.578 0.155 0.271 0.147 0.000 0.000 chr17 37079992 37411836
view ACACB 153 44 71 42 0 0 0.593 0.171 0.275 0.163 0.000 0.000 chr12 109111587 109273226
view ACAD10 167 61 73 37 0 0 0.647 0.236 0.283 0.143 0.000 0.000 chr12 111681053 111762099
view ACAD11 157 55 88 46 0 0 0.609 0.213 0.341 0.178 0.000 0.000 chr3 132553141 132664809
view ACAD8 224 87 32 17 1 1 0.868 0.337 0.124 0.066 0.004 0.004 chr11 134248568 134270855
view ACAD9 185 56 59 38 0 0 0.717 0.217 0.229 0.147 0.000 0.000 chr3 128874620 128918114
view ACADL 136 31 100 54 0 0 0.527 0.120 0.388 0.209 0.000 0.000 chr2 210182923 210230447
view ACADM 181 55 67 42 0 0 0.702 0.213 0.260 0.163 0.000 0.000 chr1 75719709 75768679
view ACADSB 186 63 56 33 0 0 0.721 0.244 0.217 0.128 0.000 0.000 chr10 123004006 123063290
view ACADS 212 74 43 28 0 0 0.822 0.287 0.167 0.109 0.000 0.000 chr12 120720826 120745008
view ACADVL 198 62 55 38 0 0 0.767 0.240 0.213 0.147 0.000 0.000 chr17 7214938 7230266
view ACAN 183 52 40 27 0 0 0.709 0.202 0.155 0.105 0.000 0.000 chr15 88798436 88880353
view ACAP1 222 76 32 26 1 0 0.860 0.295 0.124 0.101 0.004 0.000 chr17 7331529 7356477
view ACAP2 161 44 69 44 0 0 0.624 0.171 0.267 0.171 0.000 0.000 chr3 195269745 195448020
view ACAP3 147 36 86 47 0 0 0.570 0.140 0.333 0.182 0.000 0.000 chr1 1287391 1312930
view ACAT1 192 69 55 28 0 0 0.744 0.267 0.213 0.109 0.000 0.000 chr11 108116567 108152603
view ACAT2 201 69 52 35 1 0 0.779 0.267 0.202 0.136 0.004 0.000 chr6 159757045 159784112
view ACBD3 197 73 57 29 0 0 0.764 0.283 0.221 0.112 0.000 0.000 chr1 226139679 226191741
view ACBD4 225 85 32 19 0 0 0.872 0.329 0.124 0.074 0.000 0.000 chr17 45130687 45149176
view ACBD5 191 72 56 27 0 0 0.740 0.279 0.217 0.105 0.000 0.000 chr10 27190214 27245797
view ACBD6 166 62 79 35 0 0 0.643 0.240 0.306 0.136 0.000 0.000 chr1 180283230 180507577
view ACBD7 212 74 40 25 0 0 0.822 0.287 0.155 0.097 0.000 0.000 chr10 15070475 15093776
view ACCSL 222 83 36 22 0 0 0.860 0.322 0.140 0.085 0.000 0.000 chr11 44042981 44064977
view ACCS 218 82 38 21 0 0 0.845 0.318 0.147 0.081 0.000 0.000 chr11 44061270 44089237
view ACD 133 26 120 76 0 0 0.516 0.101 0.465 0.295 0.000 0.000 chr16 67652512 67665260
view ACE2 67 14 183 85 0 0 0.260 0.054 0.709 0.329 0.000 0.000 chrX 15556033 15605960
view ACER1 197 59 55 40 0 0 0.764 0.229 0.213 0.155 0.000 0.000 chr19 6301142 6338612
view ACER2 178 52 58 42 0 0 0.690 0.202 0.225 0.163 0.000 0.000 chr9 19404009 19457505
view ACER3 172 51 74 45 0 0 0.667 0.198 0.287 0.174 0.000 0.000 chr11 76855918 77031797
view ACE 186 59 60 36 0 0 0.721 0.229 0.233 0.140 0.000 0.000 chr17 63472061 63503373
view ACHE 206 69 50 34 0 0 0.798 0.267 0.194 0.132 0.000 0.000 chr7 100884994 100900888
view ACIN1 174 57 57 34 0 0 0.674 0.221 0.221 0.132 0.000 0.000 chr14 23053564 23100136
view ACKR1 222 82 35 22 0 0 0.860 0.318 0.136 0.085 0.000 0.000 chr1 159199875 159211500