Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view ZFP90 183 56 64 41 0 0 0.709 0.217 0.248 0.159 0.000 0.000 chr16 68534291 68572131
view ZFP91 167 55 81 45 0 0 0.647 0.213 0.314 0.174 0.000 0.000 chr11 58574063 58626550
view ZFP92 102 30 149 68 0 0 0.395 0.116 0.578 0.264 0.000 0.000 chrX 153406472 153431481
view ZFPL1 187 53 69 50 0 0 0.725 0.205 0.267 0.194 0.000 0.000 chr11 65079222 65093398
view ZFPM1 158 31 50 36 0 0 0.612 0.120 0.194 0.140 0.000 0.000 chr16 88448280 88542031
view ZFPM2 45 4 124 66 0 0 0.174 0.016 0.481 0.256 0.000 0.000 chr8 105313438 105809539
view ZFR2 198 64 42 27 0 0 0.767 0.248 0.163 0.105 0.000 0.000 chr19 3799024 3874038
view ZFR 190 75 53 22 0 0 0.736 0.291 0.205 0.085 0.000 0.000 chr5 32349350 32449740
view ZFTA 127 22 118 74 0 0 0.492 0.085 0.457 0.287 0.000 0.000 chr11 63754892 63773775
view ZFTRAF1 222 78 31 23 0 0 0.860 0.302 0.120 0.089 0.000 0.000 chr8 144444582 144467871
view ZFX 83 23 167 74 0 0 0.322 0.089 0.647 0.287 0.000 0.000 chrX 24144729 24221255
view ZFYVE16 112 16 112 71 0 0 0.434 0.062 0.434 0.275 0.000 0.000 chr5 80403064 80488379
view ZFYVE19 190 65 62 35 1 0 0.736 0.252 0.240 0.136 0.004 0.000 chr15 40802089 40820084
view ZFYVE1 186 66 63 31 0 0 0.721 0.256 0.244 0.120 0.000 0.000 chr14 72964451 73032106
view ZFYVE21 228 79 24 21 0 0 0.884 0.306 0.093 0.081 0.000 0.000 chr14 103710810 103738664
view ZFYVE26 144 30 89 59 0 0 0.558 0.116 0.345 0.229 0.000 0.000 chr14 67741522 67821590
view ZFYVE27 199 67 50 29 0 0 0.771 0.260 0.194 0.112 0.000 0.000 chr10 97732128 97765895
view ZFYVE28 144 34 65 37 0 0 0.558 0.132 0.252 0.143 0.000 0.000 chr4 2264597 2423645
view ZFYVE9 104 19 118 71 0 0 0.403 0.074 0.457 0.275 0.000 0.000 chr1 52137089 52351634
view ZFY 0 0 128 55 0 0 0.000 0.000 0.496 0.213 0.000 0.000 chrY 2930381 2987506
view ZG16B 217 74 36 27 0 0 0.841 0.287 0.140 0.105 0.000 0.000 chr16 2825303 2837276
view ZG16 159 47 92 54 2 0 0.616 0.182 0.357 0.209 0.008 0.000 chr16 29773256 29787973
view ZGLP1 217 75 38 28 1 0 0.841 0.291 0.147 0.109 0.004 0.000 chr19 10299803 10314815
view ZGPAT 172 53 69 37 0 0 0.667 0.205 0.267 0.143 0.000 0.000 chr20 63703039 63741142
view ZGRF1 194 71 51 26 0 0 0.752 0.275 0.198 0.101 0.000 0.000 chr4 112534339 112641909
view ZHX1 134 32 109 63 0 0 0.519 0.124 0.422 0.244 0.000 0.000 chr8 123243456 123279286
view ZHX2 142 39 48 32 0 0 0.550 0.151 0.186 0.124 0.000 0.000 chr8 122776655 122979510
view ZHX3 179 64 69 36 0 0 0.694 0.248 0.267 0.140 0.000 0.000 chr20 41173455 41322731
view ZIC1 179 62 74 41 0 0 0.694 0.240 0.287 0.159 0.000 0.000 chr3 147404365 147421719
view ZIC2 221 77 34 26 0 0 0.857 0.298 0.132 0.101 0.000 0.000 chr13 99976784 99991765
view ZIC3 90 21 163 80 1 0 0.349 0.081 0.632 0.310 0.004 0.000 chrX 137561127 137577102
view ZIC4 183 60 68 39 1 1 0.709 0.233 0.264 0.151 0.004 0.004 chr3 147381046 147411543
view ZIC5 204 67 50 35 0 0 0.791 0.260 0.194 0.136 0.000 0.000 chr13 99957964 99976767
view ZIK1 219 81 38 23 0 0 0.849 0.314 0.147 0.089 0.000 0.000 chr19 57579145 57598890
view ZIM2 184 57 50 29 0 0 0.713 0.221 0.194 0.112 0.000 0.000 chr19 56769547 56845726
view ZIM3 208 73 40 23 0 0 0.806 0.283 0.155 0.089 0.000 0.000 chr19 57129096 57150202
view ZKSCAN1 198 63 54 37 0 0 0.767 0.244 0.209 0.143 0.000 0.000 chr7 100010596 100046689
view ZKSCAN2 194 63 57 37 0 0 0.752 0.244 0.221 0.143 0.000 0.000 chr16 25231001 25262845
view ZKSCAN3 206 77 50 26 0 0 0.798 0.298 0.194 0.101 0.000 0.000 chr6 28344947 28374172
view ZKSCAN4 209 82 48 22 1 1 0.810 0.318 0.186 0.085 0.004 0.004 chr6 28236697 28257269
view ZKSCAN5 155 46 93 53 0 0 0.601 0.178 0.360 0.205 0.000 0.000 chr7 99499662 99539700
view ZKSCAN7 159 33 95 68 0 0 0.616 0.128 0.368 0.264 0.000 0.000 chr3 44550193 44577158
view ZKSCAN8 204 75 49 26 0 0 0.791 0.291 0.190 0.101 0.000 0.000 chr6 28136883 28164460
view ZMAT1 60 14 186 86 0 0 0.233 0.054 0.721 0.333 0.000 0.000 chrX 101877290 101937027
view ZMAT2 189 65 69 40 0 0 0.733 0.252 0.267 0.155 0.000 0.000 chr5 140695447 140711686
view ZMAT3 174 51 73 46 0 0 0.674 0.198 0.283 0.178 0.000 0.000 chr3 179012223 179076809
view ZMAT4 113 20 70 43 0 0 0.438 0.078 0.271 0.167 0.000 0.000 chr8 40525590 40902826
view ZMAT5 195 58 52 39 0 0 0.756 0.225 0.202 0.151 0.000 0.000 chr22 29725956 29772007
view ZMIZ1 143 33 46 33 0 0 0.554 0.128 0.178 0.128 0.000 0.000 chr10 79063966 79321519
view ZMIZ2 184 54 65 44 0 0 0.713 0.209 0.252 0.171 0.000 0.000 chr7 44743847 44774881