Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
ACKR2 170 54 70 40 0 0 0.659 0.209 0.271 0.155 0.000 0.000 chr3 42804445 42872286
ACKR3 196 66 58 36 0 0 0.760 0.256 0.225 0.140 0.000 0.000 chr2 236564825 236587354
ACKR4 178 62 77 41 0 0 0.690 0.240 0.298 0.159 0.000 0.000 chr3 132592270 132607644
ACLY 146 39 91 54 0 0 0.566 0.151 0.353 0.209 0.000 0.000 chr17 41861918 41923951
ACMSD 190 75 58 25 0 0 0.736 0.291 0.225 0.097 0.000 0.000 chr2 134833616 134907034
ACO1 190 61 55 35 0 0 0.736 0.236 0.213 0.136 0.000 0.000 chr9 32379643 32459769
ACO2 166 51 74 38 0 0 0.643 0.198 0.287 0.147 0.000 0.000 chr22 41464117 41533974
ACOD1 216 78 41 26 1 1 0.837 0.302 0.159 0.101 0.004 0.004 chr13 76943511 76963638
ACOT11 193 64 46 31 0 0 0.748 0.248 0.178 0.120 0.000 0.000 chr1 54543228 54615329
ACOT12 138 24 94 63 0 0 0.535 0.093 0.364 0.244 0.000 0.000 chr5 81324996 81399134
ACOT13 200 64 52 36 0 0 0.775 0.248 0.202 0.140 0.000 0.000 chr6 24662077 24710046
ACOT1 76 2 98 38 0 0 0.295 0.008 0.380 0.147 0.000 0.000 chr14 73532143 73548796
ACOT2 211 76 43 26 2 1 0.818 0.295 0.167 0.101 0.008 0.004 chr14 73564213 73580655
ACOT4 203 74 49 29 2 0 0.787 0.287 0.190 0.112 0.008 0.000 chr14 73586873 73600766
ACOT6 196 70 58 33 0 0 0.760 0.271 0.225 0.128 0.000 0.000 chr14 73607517 73624888
ACOT7 119 31 106 59 0 0 0.461 0.120 0.411 0.229 0.000 0.000 chr1 6259272 6398767
ACOT8 210 79 43 22 0 0 0.814 0.306 0.167 0.085 0.000 0.000 chr20 45836721 45862392
ACOT9 92 22 153 71 0 0 0.357 0.085 0.593 0.275 0.000 0.000 chrX 23696055 23748276
ACOX1 171 52 70 40 0 0 0.663 0.202 0.271 0.155 0.000 0.000 chr17 75936507 75984166
ACOX2 181 52 59 38 0 0 0.702 0.202 0.229 0.147 0.000 0.000 chr3 58500136 58542190
ACOX3 189 58 49 33 0 0 0.733 0.225 0.190 0.128 0.000 0.000 chr4 8361282 8445723
ACOXL 74 11 106 63 0 0 0.287 0.043 0.411 0.244 0.000 0.000 chr2 110727573 111123548
ACP1 194 62 58 38 0 0 0.752 0.240 0.225 0.147 0.000 0.000 chr2 259947 283283
ACP2 178 55 74 45 1 0 0.690 0.213 0.287 0.174 0.004 0.000 chr11 47234302 47253814
ACP3 183 59 68 42 0 0 0.709 0.229 0.264 0.163 0.000 0.000 chr3 132312407 132363841
ACP4 189 52 54 38 0 0 0.733 0.202 0.209 0.147 0.000 0.000 chr19 50785415 50800219
ACP5 221 76 34 27 0 0 0.857 0.295 0.132 0.105 0.000 0.000 chr19 11569660 11582645
ACP6 201 74 52 28 0 0 0.779 0.287 0.202 0.109 0.000 0.000 chr1 147637230 147675524
ACP7 200 66 48 30 0 0 0.775 0.256 0.186 0.116 0.000 0.000 chr19 39079368 39116493
ACRBP 210 73 44 28 0 0 0.814 0.283 0.171 0.109 0.000 0.000 chr12 6633075 6652432
ACRV1 212 80 45 25 0 0 0.822 0.310 0.174 0.097 0.000 0.000 chr11 125666522 125685847
ACR 231 83 23 18 1 1 0.895 0.322 0.089 0.070 0.004 0.004 chr22 50733204 50750339
ACSBG1 174 58 63 35 0 0 0.674 0.225 0.244 0.136 0.000 0.000 chr15 78162468 78239565
ACSBG2 130 29 95 58 0 0 0.504 0.112 0.368 0.225 0.000 0.000 chr19 6130667 6198091
ACSF2 159 41 88 55 0 0 0.616 0.159 0.341 0.213 0.000 0.000 chr17 50421218 50479837
ACSF3 183 55 54 34 0 0 0.709 0.213 0.209 0.132 0.000 0.000 chr16 89088852 89161233
ACSL1 195 65 45 25 0 0 0.756 0.252 0.174 0.097 0.000 0.000 chr4 184750595 184830968
ACSL3 125 26 111 66 0 0 0.484 0.101 0.430 0.256 0.000 0.000 chr2 222856036 222949639
ACSL4 47 4 191 93 0 0 0.182 0.016 0.740 0.360 0.000 0.000 chrX 109636335 109738257
ACSL5 181 63 62 35 0 0 0.702 0.244 0.240 0.136 0.000 0.000 chr10 112369116 112433376
ACSL6 162 56 77 38 0 0 0.628 0.217 0.298 0.147 0.000 0.000 chr5 131944973 132016658
ACSM1 158 45 79 48 0 0 0.612 0.174 0.306 0.186 0.000 0.000 chr16 20618235 20702680
ACSM2A 217 78 27 17 0 0 0.841 0.302 0.105 0.066 0.000 0.000 chr16 20446521 20492669
ACSM2B 193 64 53 32 0 0 0.748 0.248 0.205 0.124 0.000 0.000 chr16 20531226 20581367
ACSM3 177 54 67 42 0 0 0.686 0.209 0.260 0.163 0.000 0.000 chr16 20759014 20802581
ACSM4 214 75 38 27 0 0 0.829 0.291 0.147 0.105 0.000 0.000 chr12 7299072 7333719
ACSM5 216 77 30 20 0 0 0.837 0.298 0.116 0.078 0.000 0.000 chr16 20404534 20446336
ACSM6 156 39 84 54 0 0 0.605 0.151 0.326 0.209 0.000 0.000 chr10 95189238 95233929
ACSS1 121 21 111 76 0 0 0.469 0.081 0.430 0.295 0.000 0.000 chr20 25001237 25063139
ACSS2 155 48 92 52 0 0 0.601 0.186 0.357 0.202 0.000 0.000 chr20 34871612 34932959