Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view C9orf131 213 80 41 23 0 0 0.826 0.310 0.159 0.089 0.000 0.000 chr9 35037240 35050986
view C9orf152 232 89 22 13 1 0 0.899 0.345 0.085 0.050 0.004 0.000 chr9 110194561 110213159
view C9orf153 191 61 50 29 0 0 0.740 0.236 0.194 0.112 0.000 0.000 chr9 86215265 86264657
view C9orf24 224 85 30 17 0 0 0.868 0.329 0.116 0.066 0.000 0.000 chr9 34374019 34402810
view C9orf40 204 75 51 27 0 0 0.791 0.291 0.198 0.105 0.000 0.000 chr9 74941583 74957912
view C9orf43 154 39 87 55 0 0 0.597 0.151 0.337 0.213 0.000 0.000 chr9 113405747 113434690
view C9orf50 204 70 50 32 0 0 0.791 0.271 0.194 0.124 0.000 0.000 chr9 129607225 129626101
view C9orf57 224 84 30 17 0 0 0.868 0.326 0.116 0.066 0.000 0.000 chr9 72046376 72065613
view C9orf72 218 80 32 19 0 0 0.845 0.310 0.124 0.074 0.000 0.000 chr9 27541546 27578481
view C9orf78 192 61 63 42 0 0 0.744 0.236 0.244 0.163 0.000 0.000 chr9 129822290 129840275
view C9orf85 124 36 90 44 0 0 0.481 0.140 0.349 0.171 0.000 0.000 chr9 71906639 71978457
view CA10 77 14 99 48 0 0 0.298 0.054 0.384 0.186 0.000 0.000 chr17 51625320 52163714
view CA11 195 65 51 29 0 0 0.756 0.252 0.198 0.112 0.000 0.000 chr19 48632946 48651187
view CA12 177 59 63 36 0 0 0.686 0.229 0.244 0.140 0.000 0.000 chr15 63316378 63386846
view CA13 174 55 71 41 0 0 0.674 0.213 0.275 0.159 0.000 0.000 chr8 85240458 85289073
view CA14 207 75 46 27 1 0 0.802 0.291 0.178 0.105 0.004 0.000 chr1 150252774 150270078
view CA1 161 48 81 48 0 0 0.624 0.186 0.314 0.186 0.000 0.000 chr8 85322608 85383113
view CA2 167 50 87 51 0 0 0.647 0.194 0.337 0.198 0.000 0.000 chr8 85459007 85486493
view CA3 181 61 75 42 0 0 0.702 0.236 0.291 0.163 0.000 0.000 chr8 85433859 85454040
view CA4 189 61 64 40 0 0 0.733 0.236 0.248 0.155 0.000 0.000 chr17 60144973 60164546
view CA5A 199 59 34 27 0 0 0.771 0.229 0.132 0.105 0.000 0.000 chr16 87883013 87941529
view CA5B 73 20 174 78 0 0 0.283 0.078 0.674 0.302 0.000 0.000 chrX 15733270 15793411
view CA6 225 81 25 18 0 0 0.872 0.314 0.097 0.070 0.000 0.000 chr1 8940868 8980092
view CA7 196 67 58 35 0 0 0.760 0.260 0.225 0.136 0.000 0.000 chr16 66839414 66859147
view CA8 171 51 62 42 0 0 0.663 0.198 0.240 0.163 0.000 0.000 chr8 60180412 60286400
view CA9 222 76 32 25 0 0 0.860 0.295 0.124 0.097 0.000 0.000 chr9 35668928 35686159
view CAAP1 185 58 54 31 0 0 0.717 0.225 0.209 0.120 0.000 0.000 chr9 26835685 26897802
view CAB39L 161 45 53 40 0 0 0.624 0.174 0.205 0.155 0.000 0.000 chr13 49303650 49449064
view CAB39 170 56 65 39 0 0 0.659 0.217 0.252 0.151 0.000 0.000 chr2 230707842 230826075
view CABCOCO1 186 58 62 40 0 0 0.721 0.225 0.240 0.155 0.000 0.000 chr10 61657929 61771766
view CABIN1 133 56 94 39 0 0 0.516 0.217 0.364 0.151 0.000 0.000 chr22 24006304 24183628
view CABLES1 138 38 66 40 0 0 0.535 0.147 0.256 0.155 0.000 0.000 chr18 23130485 23265470
view CABLES2 199 58 50 38 0 0 0.771 0.225 0.194 0.147 0.000 0.000 chr20 62383634 62412285
view CABP1 208 70 46 32 0 0 0.806 0.271 0.178 0.124 0.000 0.000 chr12 120635626 120672324
view CABP2 186 53 70 51 1 0 0.721 0.205 0.271 0.198 0.004 0.000 chr11 67513912 67528446
view CABP4 183 58 68 42 2 1 0.709 0.225 0.264 0.163 0.008 0.004 chr11 67450354 67466752
view CABP5 187 55 64 45 0 0 0.725 0.213 0.248 0.174 0.000 0.000 chr19 48024383 48049079
view CABP7 218 75 35 25 0 0 0.845 0.291 0.136 0.097 0.000 0.000 chr22 29715003 29736833
view CABS1 222 80 36 25 0 0 0.860 0.310 0.140 0.097 0.000 0.000 chr4 70329981 70342116
view CABYR 203 70 49 32 0 0 0.787 0.271 0.190 0.124 0.000 0.000 chr18 24134062 24166600
view CACFD1 209 67 45 35 1 0 0.810 0.260 0.174 0.136 0.004 0.000 chr9 133454978 133475848
view CACHD1 82 7 96 62 0 0 0.318 0.027 0.372 0.240 0.000 0.000 chr1 64465129 64698053
view CACNA1A 108 19 75 47 0 0 0.419 0.074 0.291 0.182 0.000 0.000 chr19 13201442 13511479
view CACNA1B 123 38 81 45 0 0 0.477 0.147 0.314 0.174 0.000 0.000 chr9 137872782 138129619
view CACNA1C 52 3 107 54 0 0 0.202 0.012 0.415 0.209 0.000 0.000 chr12 2047987 2702950
view CACNA1D 104 17 90 49 0 0 0.403 0.066 0.349 0.190 0.000 0.000 chr3 53489611 53818733
view CACNA1E 102 12 82 61 0 0 0.395 0.047 0.318 0.236 0.000 0.000 chr1 181478517 181813084
view CACNA1F 83 20 166 76 0 0 0.322 0.078 0.643 0.295 0.000 0.000 chrX 49200063 49238340
view CACNA1G 122 15 107 71 0 0 0.473 0.058 0.415 0.275 0.000 0.000 chr17 50555715 50632474
view CACNA1H 168 40 57 37 0 0 0.651 0.155 0.221 0.143 0.000 0.000 chr16 1148106 1226768