Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view CELA1 202 68 49 31 0 0 0.783 0.264 0.190 0.120 0.000 0.000 chr12 51323442 51351679
view CELA2A 214 74 38 26 1 0 0.829 0.287 0.147 0.101 0.004 0.000 chr1 15451732 15477091
view CELA2B 206 72 50 32 0 0 0.798 0.279 0.194 0.124 0.000 0.000 chr1 15471104 15496395
view CELA3A 209 71 44 31 1 1 0.810 0.275 0.171 0.120 0.004 0.004 chr1 21996657 22017542
view CELA3B 221 74 32 26 1 1 0.857 0.287 0.124 0.101 0.004 0.004 chr1 21972022 21994354
view CELF1 169 59 68 33 0 0 0.655 0.229 0.264 0.128 0.000 0.000 chr11 47460937 47558132
view CELF2 96 8 82 49 0 0 0.372 0.031 0.318 0.190 0.000 0.000 chr10 11012872 11341675
view CELF3 215 78 36 22 0 0 0.833 0.302 0.140 0.085 0.000 0.000 chr1 151695058 151721803
view CELF4 91 11 91 52 0 0 0.353 0.043 0.353 0.202 0.000 0.000 chr18 37238040 37570798
view CELF5 130 25 74 43 0 0 0.504 0.097 0.287 0.167 0.000 0.000 chr19 3219661 3302076
view CELF6 149 50 87 40 0 0 0.578 0.194 0.337 0.155 0.000 0.000 chr15 72279727 72325157
view CELSR1 51 3 114 43 0 0 0.198 0.012 0.442 0.167 0.000 0.000 chr22 46356174 46542620
view CELSR2 177 51 64 42 0 0 0.686 0.198 0.248 0.163 0.000 0.000 chr1 109244539 109280751
view CELSR3 102 21 140 75 0 0 0.395 0.081 0.543 0.291 0.000 0.000 chr3 48631463 48667886
view CEL 207 68 39 30 1 0 0.802 0.264 0.151 0.116 0.004 0.000 chr9 133056981 133076861
view CEMIP2 159 52 71 38 0 0 0.616 0.202 0.275 0.147 0.000 0.000 chr9 71678366 71773513
view CEMIP 126 27 77 45 0 0 0.488 0.105 0.298 0.174 0.000 0.000 chr15 80774370 80956771
view CEMP1 173 55 73 41 0 0 0.671 0.213 0.283 0.159 0.000 0.000 chr16 2525035 2536408
view CENATAC 158 40 90 59 0 0 0.612 0.155 0.349 0.229 0.000 0.000 chr11 118993138 119020793
view CEND1 206 71 51 33 0 0 0.798 0.275 0.198 0.128 0.000 0.000 chr11 782115 795090
view CENPA 190 62 66 41 1 1 0.736 0.240 0.256 0.159 0.004 0.004 chr2 26781056 26799589
view CENPB 204 71 50 31 0 0 0.791 0.275 0.194 0.120 0.000 0.000 chr20 3778851 3791740
view CENPC 168 51 79 47 0 0 0.651 0.198 0.306 0.182 0.000 0.000 chr4 67463762 67550503
view CENPE 159 49 72 42 0 0 0.616 0.190 0.279 0.163 0.000 0.000 chr4 103100811 103203343
view CENPF 140 35 93 55 0 0 0.543 0.136 0.360 0.213 0.000 0.000 chr1 214598195 214669571
view CENPH 193 62 57 38 0 0 0.748 0.240 0.221 0.147 0.000 0.000 chr5 69184583 69215357
view CENPI 78 19 173 82 0 0 0.302 0.074 0.671 0.318 0.000 0.000 chrX 101093204 101171126
view CENPJ 219 78 33 24 0 0 0.849 0.302 0.128 0.093 0.000 0.000 chr13 24877279 24927861
view CENPK 186 57 60 40 1 0 0.721 0.221 0.233 0.155 0.004 0.000 chr5 65512766 65568168
view CENPL 178 62 71 36 0 0 0.690 0.240 0.275 0.140 0.000 0.000 chr1 173794550 173829883
view CENPM 128 30 100 51 0 0 0.496 0.116 0.388 0.198 0.000 0.000 chr22 41933737 41952152
view CENPN 198 80 51 21 1 1 0.767 0.310 0.198 0.081 0.004 0.004 chr16 81002214 81036485
view CENPO 190 65 58 33 0 0 0.736 0.252 0.225 0.128 0.000 0.000 chr2 24788425 24827376
view CENPP 130 40 88 46 0 0 0.504 0.155 0.341 0.178 0.000 0.000 chr9 92320953 92625529
view CENPQ 180 60 67 38 0 0 0.698 0.233 0.260 0.147 0.000 0.000 chr6 49458370 49498107
view CENPS 204 65 49 37 0 0 0.791 0.252 0.190 0.143 0.000 0.000 chr1 10425433 10447808
view CENPT 132 27 114 69 0 0 0.512 0.105 0.442 0.267 0.000 0.000 chr16 67823157 67852693
view CENPU 178 61 67 38 1 0 0.690 0.236 0.260 0.147 0.004 0.000 chr4 184689085 184739096
view CENPVL1 64 15 171 78 4 0 0.248 0.058 0.663 0.302 0.016 0.000 chrX 51705512 51717131
view CENPVL2 66 18 173 76 3 1 0.256 0.070 0.671 0.295 0.012 0.004 chrX 51676212 51687831
view CENPVL3 87 28 164 76 1 0 0.337 0.109 0.636 0.295 0.004 0.000 chrX 51612020 51623912
view CENPV 177 54 77 47 0 0 0.686 0.209 0.298 0.182 0.000 0.000 chr17 16337537 16358469
view CENPW 145 37 109 65 0 0 0.562 0.143 0.422 0.252 0.000 0.000 chr6 126335115 126353875
view CENPX 200 66 54 35 0 0 0.775 0.256 0.209 0.136 0.000 0.000 chr17 82013703 82027878
view CEP104 190 58 59 40 0 0 0.736 0.225 0.229 0.155 0.000 0.000 chr1 3807086 3862211
view CEP112 55 6 128 67 0 0 0.213 0.023 0.496 0.260 0.000 0.000 chr17 65630537 66197133
view CEP120 187 64 61 34 0 0 0.725 0.248 0.236 0.132 0.000 0.000 chr5 123339892 123428403
view CEP126 168 55 77 43 0 0 0.651 0.213 0.298 0.167 0.000 0.000 chr11 101910010 102006062
view CEP128 81 16 107 61 0 0 0.314 0.062 0.415 0.236 0.000 0.000 chr14 80491479 80946738
view CEP131 191 58 56 39 0 0 0.740 0.225 0.217 0.151 0.000 0.000 chr17 81184596 81227965