Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view CLPS 208 69 47 34 1 1 0.806 0.267 0.182 0.132 0.004 0.004 chr6 35789982 35802323
view CLPTM1L 184 49 55 39 0 0 0.713 0.190 0.213 0.151 0.000 0.000 chr5 1312752 1350099
view CLPTM1 186 61 55 35 0 0 0.721 0.236 0.213 0.136 0.000 0.000 chr19 44950380 44998341
view CLPX 94 4 136 80 0 0 0.364 0.016 0.527 0.310 0.000 0.000 chr15 65143219 65190342
view CLRN1 203 76 38 19 0 0 0.787 0.295 0.147 0.074 0.000 0.000 chr3 150921567 150977727
view CLRN2 220 79 34 23 1 1 0.853 0.306 0.132 0.089 0.004 0.004 chr4 17510165 17532104
view CLRN3 227 80 31 25 0 0 0.880 0.310 0.120 0.097 0.000 0.000 chr10 127872841 127897941
view CLSPN 147 42 98 55 0 0 0.570 0.163 0.380 0.213 0.000 0.000 chr1 35727112 35774978
view CLSTN1 134 32 97 60 0 0 0.519 0.124 0.376 0.233 0.000 0.000 chr1 9723926 9828965
view CLSTN2 55 4 107 60 0 0 0.213 0.016 0.415 0.233 0.000 0.000 chr3 139930185 140582397
view CLSTN3 196 66 55 33 0 0 0.760 0.256 0.213 0.128 0.000 0.000 chr12 7125371 7163945
view CLTA 199 70 52 30 0 0 0.771 0.271 0.202 0.116 0.000 0.000 chr9 36185921 36217059
view CLTB 202 71 53 33 0 0 0.783 0.275 0.205 0.128 0.000 0.000 chr5 176387501 176421539
view CLTCL1 172 53 64 40 0 0 0.667 0.205 0.248 0.155 0.000 0.000 chr22 19174473 19296719
view CLTC 129 35 116 65 0 0 0.500 0.136 0.450 0.252 0.000 0.000 chr17 59614895 59701956
view CLTRN 83 25 167 75 0 0 0.322 0.097 0.647 0.291 0.000 0.000 chrX 15622318 15669805
view CLUAP1 190 62 54 33 0 0 0.736 0.240 0.209 0.128 0.000 0.000 chr16 3496004 3544048
view CLUH 209 69 42 29 0 0 0.810 0.267 0.163 0.112 0.000 0.000 chr17 2684387 2716764
view CLUL1 206 64 37 30 0 0 0.798 0.248 0.143 0.116 0.000 0.000 chr18 591988 655182
view CLU 228 81 24 18 0 0 0.884 0.314 0.093 0.070 0.000 0.000 chr8 27591917 27619700
view CLVS1 91 21 98 57 0 0 0.353 0.081 0.380 0.221 0.000 0.000 chr8 61282970 61506629
view CLVS2 167 56 70 35 0 0 0.647 0.217 0.271 0.136 0.000 0.000 chr6 122991235 123077925
view CLXN 196 69 53 29 0 0 0.760 0.267 0.205 0.112 0.000 0.000 chr8 48718391 48740268
view CLYBL 108 20 76 47 0 0 0.419 0.078 0.295 0.182 0.000 0.000 chr13 99601690 99897570
view CMA1 215 90 41 14 0 0 0.833 0.349 0.159 0.054 0.000 0.000 chr14 24500353 24513265
view CMAS 224 81 29 20 0 0 0.868 0.314 0.112 0.078 0.000 0.000 chr12 22041218 22070668
view CMBL 174 43 68 52 0 0 0.674 0.167 0.264 0.202 0.000 0.000 chr5 10272595 10312902
view CMC1 168 52 69 43 0 0 0.651 0.202 0.267 0.167 0.000 0.000 chr3 28236619 28330142
view CMC2 203 83 45 18 0 0 0.787 0.322 0.174 0.070 0.000 0.000 chr16 80961448 81011885
view CMC4 83 22 168 78 1 0 0.322 0.085 0.651 0.302 0.004 0.000 chrX 155056622 155076136
view CMIP 133 25 55 35 0 0 0.516 0.097 0.213 0.136 0.000 0.000 chr16 81439808 81716762
view CMKLR1 199 65 33 23 0 0 0.771 0.252 0.128 0.089 0.000 0.000 chr12 108283046 108344311
view CMKLR2 160 41 74 43 0 0 0.620 0.159 0.287 0.167 0.000 0.000 chr2 206170316 206218371
view CMPK1 181 63 66 34 0 0 0.702 0.244 0.256 0.132 0.000 0.000 chr1 47328790 47383839
view CMPK2 195 68 57 33 0 0 0.756 0.264 0.221 0.128 0.000 0.000 chr2 6843316 6870907
view CMSS1 116 23 95 57 0 0 0.450 0.089 0.368 0.221 0.000 0.000 chr3 99812862 100186732
view CMTM1 198 73 56 30 0 0 0.767 0.283 0.217 0.116 0.000 0.000 chr16 66561439 66584135
view CMTM2 204 76 53 28 0 0 0.791 0.295 0.205 0.109 0.000 0.000 chr16 66574463 66593275
view CMTM3 212 76 43 27 0 0 0.822 0.295 0.167 0.105 0.000 0.000 chr16 66599704 66618887
view CMTM4 159 56 77 40 0 0 0.616 0.217 0.298 0.155 0.000 0.000 chr16 66609750 66701743
view CMTM5 210 69 42 31 0 0 0.814 0.267 0.163 0.120 0.000 0.000 chr14 23372046 23384772
view CMTM6 191 68 56 31 1 1 0.740 0.264 0.217 0.120 0.004 0.004 chr3 32476312 32507852
view CMTM7 183 63 55 34 0 0 0.709 0.244 0.213 0.132 0.000 0.000 chr3 32386853 32460528
view CMTM8 171 53 41 23 0 0 0.663 0.205 0.159 0.089 0.000 0.000 chr3 32233680 32375321
view CMTR1 178 63 64 34 0 0 0.690 0.244 0.248 0.132 0.000 0.000 chr6 37428221 37486508
view CMTR2 218 85 39 20 0 0 0.845 0.329 0.151 0.078 0.000 0.000 chr16 71276392 71294402
view CMYA5 178 61 47 27 0 0 0.690 0.236 0.182 0.105 0.000 0.000 chr5 79684836 79805222
view CNBD1 76 10 98 56 0 0 0.295 0.039 0.380 0.217 0.000 0.000 chr8 86861415 87387859
view CNBD2 133 37 106 58 0 0 0.516 0.143 0.411 0.225 0.000 0.000 chr20 35963590 36035700
view CNBP 214 76 41 27 0 0 0.829 0.295 0.159 0.105 0.000 0.000 chr3 129162827 129188896