Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
ADA 163 35 67 44 0 0 0.632 0.136 0.260 0.171 0.000 0.000 chr20 44614522 44656699
ADCK1 142 33 79 48 0 0 0.550 0.128 0.306 0.186 0.000 0.000 chr14 77795109 77940014
ADCK2 144 24 106 74 0 0 0.558 0.093 0.411 0.287 0.000 0.000 chr7 140667945 140700110
ADCK5 172 45 69 45 0 0 0.667 0.174 0.267 0.174 0.000 0.000 chr8 144369047 144398242
ADCY10 162 48 61 39 0 0 0.628 0.186 0.236 0.151 0.000 0.000 chr1 167804386 167919134
ADCY1 138 44 69 37 0 0 0.535 0.171 0.267 0.143 0.000 0.000 chr7 45569368 45728116
ADCY2 69 4 103 55 0 0 0.267 0.016 0.399 0.213 0.000 0.000 chr5 7391138 7835081
ADCY3 135 29 81 48 0 0 0.523 0.112 0.314 0.186 0.000 0.000 chr2 24814169 24925237
ADCY4 218 81 36 21 0 0 0.845 0.314 0.140 0.081 0.000 0.000 chr14 24313359 24340071
ADCY5 129 30 78 42 0 0 0.500 0.116 0.302 0.163 0.000 0.000 chr3 123277296 123454090
ADCY6 151 39 87 51 0 0 0.585 0.151 0.337 0.198 0.000 0.000 chr12 48761194 48794089
ADCY7 168 43 70 46 0 0 0.651 0.167 0.271 0.178 0.000 0.000 chr16 50261551 50323135
ADCY8 122 35 64 38 0 0 0.473 0.136 0.248 0.147 0.000 0.000 chr8 130775301 131045909
ADCY9 159 44 64 38 0 0 0.616 0.171 0.248 0.147 0.000 0.000 chr16 3957653 4121442
ADCYAP1R1 160 46 64 40 0 0 0.620 0.178 0.248 0.155 0.000 0.000 chr7 31047308 31116474
ADCYAP1 243 92 13 11 0 0 0.942 0.357 0.050 0.043 0.000 0.000 chr18 899871 917172
ADD1 159 39 79 52 0 0 0.616 0.151 0.306 0.202 0.000 0.000 chr4 2838844 2935062
ADD2 150 36 78 51 0 0 0.581 0.140 0.302 0.198 0.000 0.000 chr2 70651784 70773200
ADD3 143 51 84 41 0 0 0.554 0.198 0.326 0.159 0.000 0.000 chr10 110002984 110140565
ADGB 137 42 55 33 0 0 0.531 0.163 0.213 0.128 0.000 0.000 chr6 146593972 146820462
ADGRA1 183 43 48 36 0 0 0.709 0.167 0.186 0.140 0.000 0.000 chr10 133082924 133136675
ADGRA2 184 51 55 35 0 0 0.713 0.198 0.213 0.136 0.000 0.000 chr8 37791883 37849896
ADGRA3 144 40 83 50 0 0 0.558 0.155 0.322 0.194 0.000 0.000 chr4 22382376 22521066
ADGRB1 154 35 64 45 0 0 0.597 0.136 0.248 0.174 0.000 0.000 chr8 142444649 142550007
ADGRB2 139 31 101 60 0 0 0.539 0.120 0.391 0.233 0.000 0.000 chr1 31722117 31769340
ADGRB3 59 2 103 59 0 0 0.229 0.008 0.399 0.229 0.000 0.000 chr6 68630282 69394506
ADGRD1 120 21 83 56 0 0 0.465 0.081 0.322 0.217 0.000 0.000 chr12 130948907 131146469
ADGRD2 201 63 45 31 0 0 0.779 0.244 0.174 0.120 0.000 0.000 chr9 124445451 124483580
ADGRE1 168 39 64 47 0 0 0.651 0.151 0.248 0.182 0.000 0.000 chr19 6882579 6945450
ADGRE2 108 17 92 47 0 0 0.419 0.066 0.357 0.182 0.000 0.000 chr19 14727392 14783560
ADGRE3 185 57 50 34 0 0 0.717 0.221 0.194 0.132 0.000 0.000 chr19 14614117 14679844
ADGRE5 186 50 51 35 0 0 0.721 0.194 0.198 0.136 0.000 0.000 chr19 14376444 14413723
ADGRF1 199 76 48 22 0 0 0.771 0.295 0.186 0.085 0.000 0.000 chr6 46992708 47047332
ADGRF3 160 37 81 56 0 0 0.620 0.143 0.314 0.217 0.000 0.000 chr2 26303175 26351789
ADGRF4 196 68 53 30 1 1 0.760 0.264 0.205 0.116 0.004 0.004 chr6 47693580 47727014
ADGRF5 190 60 51 33 0 0 0.736 0.233 0.198 0.128 0.000 0.000 chr6 46847522 46926938
ADGRG1 223 76 25 22 0 0 0.864 0.295 0.097 0.085 0.000 0.000 chr16 57623630 57670567
ADGRG2 31 3 198 86 0 0 0.120 0.012 0.767 0.333 0.000 0.000 chrX 18984307 19127468
ADGRG3 223 77 29 22 0 0 0.864 0.298 0.112 0.085 0.000 0.000 chr16 57663306 57694378
ADGRG4 49 10 189 87 0 0 0.190 0.039 0.733 0.337 0.000 0.000 chrX 136295963 136421890
ADGRG5 202 73 48 26 0 0 0.783 0.283 0.186 0.101 0.000 0.000 chr16 57537643 57582189
ADGRG6 129 39 92 47 0 0 0.500 0.151 0.357 0.182 0.000 0.000 chr6 142297007 142451261
ADGRG7 169 56 66 37 0 0 0.655 0.217 0.256 0.143 0.000 0.000 chr3 100604601 100700479
ADGRL1 110 21 102 54 0 0 0.426 0.081 0.395 0.209 0.000 0.000 chr19 14142743 14211169
ADGRL2 152 35 77 56 0 0 0.589 0.136 0.298 0.217 0.000 0.000 chr1 81795934 81998932
ADGRL3 28 0 115 56 0 0 0.109 0.000 0.446 0.217 0.000 0.000 chr4 61195326 62083335
ADGRL4 194 68 50 29 0 0 0.752 0.264 0.194 0.112 0.000 0.000 chr1 78884764 79011730
ADGRV1 78 15 100 58 0 0 0.302 0.058 0.388 0.225 0.000 0.000 chr5 90553797 91169437
ADH1A 168 49 85 53 1 0 0.651 0.190 0.329 0.205 0.004 0.000 chr4 99271369 99295985
ADH1B 181 51 65 44 2 1 0.702 0.198 0.252 0.171 0.008 0.004 chr4 99299971 99326401