Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view ADH1C 179 48 73 52 0 0 0.694 0.186 0.283 0.202 0.000 0.000 chr4 99331497 99357746
view ADH4 168 51 82 49 0 0 0.651 0.198 0.318 0.190 0.000 0.000 chr4 99118658 99149297
view ADH5 167 50 90 55 0 0 0.647 0.194 0.349 0.213 0.000 0.000 chr4 99065978 99093788
view ADH6 155 43 97 58 0 0 0.601 0.167 0.376 0.225 0.000 0.000 chr4 99197639 99224246
view ADH7 207 73 47 28 0 0 0.802 0.283 0.182 0.109 0.000 0.000 chr4 99407263 99440342
view ADHFE1 200 73 46 24 0 0 0.775 0.283 0.178 0.093 0.000 0.000 chr8 66427504 66473907
view ADI1 195 69 51 29 1 1 0.756 0.267 0.198 0.112 0.004 0.004 chr2 3492366 3524531
view ADIG 185 58 70 45 0 0 0.717 0.225 0.271 0.174 0.000 0.000 chr20 38576197 38593463
view ADIPOQ 241 94 15 10 0 0 0.934 0.364 0.058 0.039 0.000 0.000 chr3 186837710 186863463
view ADIPOR1 220 86 36 17 0 0 0.853 0.333 0.140 0.066 0.000 0.000 chr1 202935832 202963312
view ADIPOR2 188 63 56 33 0 0 0.729 0.244 0.217 0.128 0.000 0.000 chr12 1686070 1793674
view ADIRF 203 67 52 37 2 0 0.787 0.260 0.202 0.143 0.008 0.000 chr10 86963482 86975915
view ADISSP 222 75 33 27 0 0 0.860 0.291 0.128 0.105 0.000 0.000 chr20 3748508 3772753
view ADK 99 24 118 63 0 0 0.384 0.093 0.457 0.244 0.000 0.000 chr10 74146221 74714290
view ADM2 222 74 30 25 0 0 0.860 0.287 0.116 0.097 0.000 0.000 chr22 50476543 50491437
view ADM5 195 54 58 46 0 0 0.756 0.209 0.225 0.178 0.000 0.000 chr19 49684594 49695575
view ADM 203 72 54 32 0 0 0.787 0.279 0.209 0.124 0.000 0.000 chr11 10300073 10312397
view ADNP2 193 68 59 34 0 0 0.748 0.264 0.229 0.132 0.000 0.000 chr18 80104262 80145346
view ADNP 178 58 72 42 0 0 0.690 0.225 0.279 0.163 0.000 0.000 chr20 50883918 50936437
view ADORA1 203 69 41 26 0 0 0.787 0.267 0.159 0.101 0.000 0.000 chr1 203122726 203172405
view ADORA2A 192 65 60 36 0 0 0.744 0.252 0.233 0.140 0.000 0.000 chr22 24422599 24447357
view ADORA2B 172 47 63 42 0 0 0.667 0.182 0.244 0.163 0.000 0.000 chr17 15940130 15980746
view ADORA3 228 87 30 18 0 0 0.884 0.337 0.116 0.070 0.000 0.000 chr1 111494429 111508633
view ADO 212 85 43 17 0 0 0.822 0.329 0.167 0.066 0.000 0.000 chr10 62799720 62813479
view ADPGK 184 69 67 30 0 0 0.713 0.267 0.260 0.116 0.000 0.000 chr15 72746294 72788758
view ADPRHL1 130 21 87 52 0 0 0.504 0.081 0.337 0.202 0.000 0.000 chr13 113394611 113458488
view ADPRH 226 85 30 18 0 0 0.876 0.329 0.116 0.070 0.000 0.000 chr3 119574492 119594945
view ADPRM 200 71 55 32 0 0 0.775 0.275 0.213 0.124 0.000 0.000 chr17 10692594 10716558
view ADPRS 204 76 53 28 1 1 0.791 0.295 0.205 0.109 0.004 0.004 chr1 36083892 36098932
view ADRA1A 193 65 43 23 0 0 0.748 0.252 0.167 0.089 0.000 0.000 chr8 26763809 26872278
view ADRA1B 191 62 49 34 1 1 0.740 0.240 0.190 0.132 0.004 0.004 chr5 159911482 159978012
view ADRA1D 225 89 25 10 0 0 0.872 0.345 0.097 0.039 0.000 0.000 chr20 4215630 4254287
view ADRA2A 215 83 42 21 0 0 0.833 0.322 0.163 0.081 0.000 0.000 chr10 111072029 111085907
view ADRA2B 194 66 60 36 0 0 0.752 0.256 0.233 0.140 0.000 0.000 chr2 96107876 96121571
view ADRA2C 209 65 46 37 0 0 0.810 0.252 0.178 0.143 0.000 0.000 chr4 3761385 3773526
view ADRB1 196 64 58 37 1 1 0.760 0.248 0.225 0.143 0.004 0.004 chr10 114038866 114051904
view ADRB2 226 81 29 21 0 0 0.876 0.314 0.112 0.081 0.000 0.000 chr5 148821611 148833623
view ADRB3 180 62 73 41 2 0 0.698 0.240 0.283 0.159 0.008 0.000 chr8 37957990 37971599
view ADRM1 183 49 68 50 0 0 0.709 0.190 0.264 0.194 0.000 0.000 chr20 62297997 62313862
view ADSL 150 47 98 56 1 0 0.581 0.182 0.380 0.217 0.004 0.000 chr22 40341500 40374367
view ADSS1 200 66 48 29 0 0 0.775 0.256 0.186 0.112 0.000 0.000 chr14 104719229 104752310
view ADSS2 203 71 48 29 0 0 0.787 0.275 0.186 0.112 0.000 0.000 chr1 244403494 244456909
view ADTRP 204 70 41 26 0 0 0.791 0.271 0.159 0.101 0.000 0.000 chr6 11708523 11783803
view AEBP1 212 76 44 27 0 0 0.822 0.295 0.171 0.105 0.000 0.000 chr7 44099345 44119560
view AEBP2 201 70 50 31 0 0 0.779 0.271 0.194 0.120 0.000 0.000 chr12 19434492 19527227
view AEN 219 82 36 20 0 0 0.849 0.318 0.140 0.078 0.000 0.000 chr15 88616340 88637281
view AFAP1L1 142 40 81 45 0 0 0.550 0.155 0.314 0.174 0.000 0.000 chr5 149266859 149348637
view AFAP1L2 130 30 87 55 0 0 0.504 0.116 0.337 0.213 0.000 0.000 chr10 114289824 114409502
view AFAP1 158 41 64 42 0 0 0.612 0.159 0.248 0.163 0.000 0.000 chr4 7753714 7944861
view AFDN 162 46 76 48 0 0 0.628 0.178 0.295 0.186 0.000 0.000 chr6 167821911 167977023