Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
DCBLD2 164 44 78 51 0 0 0.636 0.171 0.302 0.198 0.000 0.000 chr3 98790941 98906695
DCC 57 7 94 47 0 0 0.221 0.027 0.364 0.182 0.000 0.000 chr18 52335197 53540899
DCDC1 75 13 114 59 0 0 0.291 0.050 0.442 0.229 0.000 0.000 chr11 30858603 31374739
DCDC2B 201 71 53 30 0 0 0.779 0.275 0.205 0.116 0.000 0.000 chr1 32204089 32221192
DCDC2C 161 48 65 39 0 0 0.624 0.186 0.252 0.151 0.000 0.000 chr2 3698575 3853008
DCDC2 108 26 103 57 0 0 0.419 0.101 0.399 0.221 0.000 0.000 chr6 24166755 24363059
DCD 213 77 42 26 1 0 0.826 0.298 0.163 0.101 0.004 0.000 chr12 54639589 54653365
DCHS1 186 52 50 34 1 1 0.721 0.202 0.194 0.132 0.004 0.004 chr11 6616330 6660809
DCHS2 95 17 103 61 0 0 0.368 0.066 0.399 0.236 0.000 0.000 chr4 154226742 154496799
DCK 140 29 99 64 0 0 0.543 0.112 0.384 0.248 0.000 0.000 chr4 70988649 71035914
DCLK1 114 20 64 41 0 0 0.442 0.078 0.248 0.159 0.000 0.000 chr13 35763652 36136382
DCLK2 57 6 96 31 0 0 0.221 0.023 0.372 0.120 0.000 0.000 chr4 150073445 150262438
DCLK3 210 77 36 23 0 0 0.814 0.298 0.140 0.089 0.000 0.000 chr3 36707421 36769553
DCLRE1A 199 66 44 28 0 0 0.771 0.256 0.171 0.109 0.000 0.000 chr10 113829725 113859082
DCLRE1B 222 82 34 22 1 0 0.860 0.318 0.132 0.085 0.004 0.000 chr1 113900326 113919086
DCLRE1C 195 65 52 35 0 0 0.756 0.252 0.202 0.136 0.000 0.000 chr10 14899613 14959096
DCN 117 35 111 57 0 0 0.453 0.136 0.430 0.221 0.000 0.000 chr12 91135484 91187817
DCP1A 182 63 64 35 0 0 0.705 0.244 0.248 0.136 0.000 0.000 chr3 53278429 53352543
DCP1B 188 65 62 35 0 0 0.729 0.252 0.240 0.136 0.000 0.000 chr12 1941053 2009457
DCP2 181 64 66 35 0 0 0.702 0.248 0.256 0.136 0.000 0.000 chr5 112971798 113027195
DCPS 170 49 68 41 0 0 0.659 0.190 0.264 0.159 0.000 0.000 chr11 126299060 126355005
DCST1 152 23 93 70 0 0 0.589 0.089 0.360 0.271 0.000 0.000 chr1 155028824 155055930
DCST2 170 44 81 55 0 0 0.659 0.171 0.314 0.213 0.000 0.000 chr1 155013527 155038781
DCSTAMP 216 79 34 20 0 0 0.837 0.306 0.132 0.078 0.000 0.000 chr8 104334826 104361689
DCTD 187 61 62 40 0 0 0.725 0.236 0.240 0.155 0.000 0.000 chr4 182885091 182922386
DCTN1 190 73 62 28 0 0 0.736 0.283 0.240 0.109 0.000 0.000 chr2 74356155 74385311
DCTN2 175 62 75 39 0 0 0.678 0.240 0.291 0.151 0.000 0.000 chr12 57525051 57552192
DCTN3 213 76 43 27 0 0 0.826 0.295 0.167 0.105 0.000 0.000 chr9 34608546 34625495
DCTN4 142 44 105 56 0 0 0.550 0.171 0.407 0.217 0.000 0.000 chr5 150703440 150764017
DCTN5 156 57 88 37 0 0 0.605 0.221 0.341 0.143 0.000 0.000 chr16 23636466 23682472
DCTN6 195 74 52 24 0 0 0.756 0.287 0.202 0.093 0.000 0.000 chr8 30151369 30188639
DCTPP1 184 54 70 47 1 1 0.713 0.209 0.271 0.182 0.004 0.004 chr16 30418615 30435030
DCT 167 41 74 54 0 0 0.647 0.159 0.287 0.209 0.000 0.000 chr13 94431811 94484682
DCUN1D1 162 49 76 41 0 0 0.628 0.190 0.295 0.159 0.000 0.000 chr3 182933074 182985538
DCUN1D2 181 55 62 38 0 0 0.702 0.213 0.240 0.147 0.000 0.000 chr13 113450819 113495711
DCUN1D3 188 63 62 37 0 0 0.729 0.244 0.240 0.143 0.000 0.000 chr16 20849925 20905358
DCUN1D4 130 38 109 60 0 0 0.504 0.147 0.422 0.233 0.000 0.000 chr4 51838153 51921837
DCUN1D5 158 47 78 44 0 0 0.612 0.182 0.302 0.171 0.000 0.000 chr11 103045686 103097160
DCXR 210 71 39 26 2 1 0.814 0.275 0.151 0.101 0.008 0.004 chr17 82030858 82042697
DCX 27 0 214 97 0 0 0.105 0.000 0.829 0.376 0.000 0.000 chrX 111288779 111417192
DDA1 193 59 57 39 2 1 0.748 0.229 0.221 0.151 0.008 0.004 chr19 17304563 17328298
DDAH1 207 71 38 25 0 0 0.802 0.275 0.147 0.097 0.000 0.000 chr1 85313485 85470159
DDAH2 193 55 62 48 1 0 0.748 0.213 0.240 0.186 0.004 0.000 chr6 31722040 31734299
DDB1 89 10 153 82 0 0 0.345 0.039 0.593 0.318 0.000 0.000 chr11 61294451 61338105
DDB2 179 56 69 44 0 0 0.694 0.217 0.267 0.171 0.000 0.000 chr11 47209974 47244217
DDC 179 62 57 29 0 0 0.694 0.240 0.221 0.112 0.000 0.000 chr7 50453442 50570405
DDHD1 144 39 87 48 0 0 0.558 0.151 0.337 0.186 0.000 0.000 chr14 53031755 53158323
DDHD2 126 48 117 51 0 0 0.488 0.186 0.453 0.198 0.000 0.000 chr8 38226585 38267836
DDI1 223 84 31 18 0 0 0.864 0.326 0.120 0.070 0.000 0.000 chr11 104031640 104044196
DDI2 135 28 96 57 0 0 0.523 0.109 0.372 0.221 0.000 0.000 chr1 15612458 15674044