Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
DHX8 176 61 68 37 0 0 0.682 0.236 0.264 0.143 0.000 0.000 chr17 43478975 43530670
DHX9 137 35 100 60 0 0 0.531 0.136 0.388 0.233 0.000 0.000 chr1 182834347 182892982
DIABLO 189 61 61 40 0 0 0.733 0.236 0.236 0.155 0.000 0.000 chr12 122202668 122231052
DIAPH1 167 47 76 49 0 0 0.647 0.182 0.295 0.190 0.000 0.000 chr5 141510021 141624000
DIAPH2 13 1 184 80 0 0 0.050 0.004 0.713 0.310 0.000 0.000 chrX 96679842 97609997
DIAPH3 103 21 87 50 0 0 0.399 0.081 0.337 0.194 0.000 0.000 chr13 59660583 60168928
DICER1 152 50 94 49 0 0 0.589 0.194 0.364 0.190 0.000 0.000 chr14 95081228 95162529
DIDO1 159 44 81 50 0 0 0.616 0.171 0.314 0.194 0.000 0.000 chr20 62872743 62931505
DIMT1 201 75 52 27 0 0 0.779 0.291 0.202 0.105 0.000 0.000 chr5 62382254 62408905
DIO1 225 78 29 23 0 0 0.872 0.302 0.112 0.089 0.000 0.000 chr1 53889187 53916086
DIO2 202 73 52 30 1 0 0.783 0.283 0.202 0.116 0.004 0.000 chr14 80192526 80216504
DIO3 192 57 60 42 0 0 0.744 0.221 0.233 0.163 0.000 0.000 chr14 101556495 101568452
DIP2A 186 63 53 30 0 0 0.721 0.244 0.205 0.116 0.000 0.000 chr21 46453891 46575015
DIP2B 141 32 93 55 0 0 0.547 0.124 0.360 0.213 0.000 0.000 chr12 50499985 50753657
DIP2C 44 6 99 33 0 0 0.171 0.023 0.384 0.128 0.000 0.000 chr10 269201 694668
DIPK1A 99 11 127 80 0 0 0.384 0.043 0.492 0.310 0.000 0.000 chr1 92837167 92966462
DIPK1B 210 66 44 35 0 0 0.814 0.256 0.171 0.136 0.000 0.000 chr9 136707572 136729742
DIPK1C 241 90 15 13 0 0 0.934 0.349 0.058 0.050 0.000 0.000 chr18 74429775 74462308
DIPK2A 203 72 53 32 0 0 0.787 0.279 0.205 0.124 0.000 0.000 chr3 143966823 143997368
DIPK2B 89 28 158 70 0 0 0.345 0.109 0.612 0.271 0.000 0.000 chrX 45143373 45205876
DIRAS1 205 64 48 36 0 0 0.795 0.248 0.186 0.140 0.000 0.000 chr19 2709567 2726372
DIRAS2 219 88 35 15 0 0 0.849 0.341 0.136 0.058 0.000 0.000 chr9 90604832 90647824
DIRAS3 187 58 67 43 0 0 0.725 0.225 0.260 0.167 0.000 0.000 chr1 68040962 68055627
DIS3L2 151 38 80 48 0 0 0.585 0.147 0.310 0.186 0.000 0.000 chr2 231956713 232342192
DIS3L 199 73 47 29 0 0 0.771 0.283 0.182 0.112 0.000 0.000 chr15 66288568 66338898
DIS3 210 76 44 27 0 0 0.814 0.295 0.171 0.105 0.000 0.000 chr13 72747169 72786900
DISC1 19 6 72 27 0 0 0.074 0.023 0.279 0.105 0.000 0.000 chr1 231621790 232046272
DISP1 173 53 53 34 0 0 0.671 0.205 0.205 0.132 0.000 0.000 chr1 222810039 223010995
DISP2 197 64 56 36 1 1 0.764 0.248 0.217 0.140 0.004 0.004 chr15 40353219 40383621
DISP3 178 63 59 30 0 0 0.690 0.244 0.229 0.116 0.000 0.000 chr1 11474155 11542551
DIXDC1 138 42 102 52 0 0 0.535 0.163 0.395 0.202 0.000 0.000 chr11 111932343 112027653
DKC1 81 18 173 84 0 0 0.314 0.070 0.671 0.326 0.000 0.000 chrX 154757864 154782689
DKK1 204 70 51 33 2 1 0.791 0.271 0.198 0.128 0.008 0.004 chr10 52309281 52322657
DKK2 108 28 88 47 0 0 0.419 0.109 0.341 0.182 0.000 0.000 chr4 106916802 107041313
DKK3 207 72 40 25 0 0 0.802 0.279 0.155 0.097 0.000 0.000 chr11 11958036 12013626
DKK4 189 66 61 35 4 2 0.733 0.256 0.236 0.136 0.016 0.008 chr8 42369063 42382229
DKKL1 197 65 58 37 0 0 0.764 0.252 0.225 0.143 0.000 0.000 chr19 49358877 49380116
DLAT 167 52 80 46 0 0 0.647 0.202 0.310 0.178 0.000 0.000 chr11 112020408 112069404
DLC1 105 15 69 44 0 0 0.407 0.058 0.267 0.171 0.000 0.000 chr8 13078361 13519851
DLD 202 70 48 31 0 0 0.783 0.271 0.186 0.120 0.000 0.000 chr7 107886183 107926198
DLEC1 149 45 77 42 0 0 0.578 0.174 0.298 0.163 0.000 0.000 chr3 38034208 38129025
DLEU7 215 75 36 24 1 1 0.833 0.291 0.140 0.093 0.004 0.004 chr13 50817905 50848692
DLG1 165 50 71 45 0 0 0.640 0.194 0.275 0.174 0.000 0.000 chr3 197037560 197303612
DLG2 7 0 114 51 0 0 0.027 0.000 0.442 0.198 0.000 0.000 chr11 83450173 85632344
DLG3 78 25 167 69 0 0 0.302 0.097 0.647 0.267 0.000 0.000 chrX 70439835 70510490
DLG4 188 52 59 45 0 0 0.729 0.202 0.229 0.174 0.000 0.000 chr17 7182187 7222627
DLG5 165 52 71 38 0 0 0.640 0.202 0.275 0.147 0.000 0.000 chr10 77785791 77931755
DLGAP1 40 0 87 41 0 0 0.155 0.000 0.337 0.159 0.000 0.000 chr18 3491032 4460307
DLGAP2 20 0 67 12 0 0 0.078 0.000 0.260 0.047 0.000 0.000 chr8 732628 1713476
DLGAP3 132 22 100 67 0 0 0.512 0.085 0.388 0.260 0.000 0.000 chr1 34860436 34934650