Genic Haplotype Summary

Detail Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
DGCR8 209 77 44 24 0 0 0.810 0.298 0.171 0.093 0.000 0.000 chr22 20075241 20116872
DGKA 163 51 78 41 0 0 0.632 0.198 0.302 0.159 0.000 0.000 chr12 55926162 55959023
DGKB 73 10 72 39 0 0 0.283 0.039 0.279 0.151 0.000 0.000 chr7 14140049 14907751
DGKD 167 47 60 39 0 0 0.647 0.182 0.233 0.151 0.000 0.000 chr2 233349494 233477098
DGKE 161 40 84 53 0 0 0.624 0.155 0.326 0.205 0.000 0.000 chr17 56829151 56874567
DGKG 116 17 82 53 0 0 0.450 0.066 0.318 0.205 0.000 0.000 chr3 186142201 186367234
DGKH 157 46 64 40 0 0 0.609 0.178 0.248 0.155 0.000 0.000 chr13 42043648 42247896
DGKI 46 2 115 65 0 0 0.178 0.008 0.446 0.252 0.000 0.000 chr7 137376037 137851974
DGKK 60 11 178 82 0 0 0.233 0.043 0.690 0.318 0.000 0.000 chrX 50360409 50475825
DGKQ 218 79 29 17 0 0 0.845 0.306 0.112 0.066 0.000 0.000 chr4 953887 978569
DGKZ 135 25 107 68 0 0 0.523 0.097 0.415 0.264 0.000 0.000 chr11 46342463 46385551
DGLUCY 107 13 106 71 0 0 0.415 0.050 0.411 0.275 0.000 0.000 chr14 91109073 91230632
DGUOK 175 55 73 44 0 0 0.678 0.213 0.283 0.171 0.000 0.000 chr2 73921880 73963946
DHCR24 192 69 54 28 0 0 0.744 0.267 0.209 0.109 0.000 0.000 chr1 54844627 54892195
DHCR7 204 68 49 33 1 1 0.791 0.264 0.190 0.128 0.004 0.004 chr11 71429411 71453393
DHDDS 157 38 89 58 0 0 0.609 0.147 0.345 0.225 0.000 0.000 chr1 26427321 26476306
DHDH 217 76 37 26 1 1 0.841 0.295 0.143 0.101 0.004 0.004 chr19 48928699 48949969
DHFR2 196 65 60 38 0 0 0.760 0.252 0.233 0.147 0.000 0.000 chr3 94052922 94067916
DHFR 188 61 55 32 0 0 0.729 0.236 0.213 0.124 0.000 0.000 chr5 80621226 80659983
DHH 211 77 44 25 0 0 0.818 0.298 0.171 0.097 0.000 0.000 chr12 49081656 49099801
DHODH 206 65 45 33 1 1 0.798 0.252 0.174 0.128 0.004 0.004 chr16 72003744 72032659
DHPS 199 60 56 42 0 0 0.771 0.233 0.217 0.163 0.000 0.000 chr19 12670717 12686880
DHRS11 192 64 62 40 0 0 0.744 0.248 0.240 0.155 0.000 0.000 chr17 36586879 36605804
DHRS12 209 72 37 25 0 0 0.810 0.279 0.143 0.097 0.000 0.000 chr13 51762993 51809163
DHRS13 205 69 52 35 0 0 0.795 0.267 0.202 0.136 0.000 0.000 chr17 28892781 28908079
DHRS1 206 74 50 29 0 0 0.798 0.287 0.194 0.112 0.000 0.000 chr14 24285598 24304780
DHRS2 222 75 29 25 1 0 0.860 0.291 0.112 0.097 0.004 0.000 chr14 23631364 23650639
DHRS3 187 63 44 25 0 0 0.725 0.244 0.171 0.097 0.000 0.000 chr1 12562910 12623210
DHRS4L2 15 0 107 43 0 0 0.058 0.000 0.415 0.167 0.000 0.000 chr14 23983929 24011403
DHRS4 133 26 89 47 0 0 0.516 0.101 0.345 0.182 0.000 0.000 chr14 23948770 23974279
DHRS7B 190 67 61 34 0 0 0.736 0.260 0.236 0.132 0.000 0.000 chr17 21121964 21196420
DHRS7C 211 67 31 25 0 0 0.818 0.260 0.120 0.097 0.000 0.000 chr17 9766438 9796592
DHRS7 193 72 60 28 1 1 0.748 0.279 0.233 0.109 0.004 0.004 chr14 60139119 60170398
DHRS9 198 67 54 33 0 0 0.767 0.260 0.209 0.128 0.000 0.000 chr2 169064563 169101167
DHRSX 15 1 67 16 0 0 0.058 0.004 0.260 0.062 0.000 0.000 chrX 2214506 2505976
DHTKD1 186 61 55 33 0 0 0.721 0.236 0.213 0.128 0.000 0.000 chr10 12063954 12128221
DHX15 186 59 62 43 0 0 0.721 0.229 0.240 0.167 0.000 0.000 chr4 24522475 24589554
DHX16 191 63 61 38 0 0 0.740 0.244 0.236 0.147 0.000 0.000 chr6 30648127 30678006
DHX29 169 63 80 39 0 0 0.655 0.244 0.310 0.151 0.000 0.000 chr5 55251055 55312694
DHX30 132 33 106 61 0 0 0.512 0.128 0.411 0.236 0.000 0.000 chr3 47798138 47855193
DHX32 211 79 41 20 0 0 0.818 0.306 0.159 0.078 0.000 0.000 chr10 125831337 125886292
DHX33 182 55 58 36 0 0 0.705 0.213 0.225 0.140 0.000 0.000 chr17 5435917 5473982
DHX34 190 61 55 34 0 0 0.736 0.236 0.213 0.132 0.000 0.000 chr19 47344315 47387704
DHX35 144 52 94 47 0 0 0.558 0.202 0.364 0.182 0.000 0.000 chr20 38957344 39044721
DHX36 182 71 65 29 0 0 0.705 0.275 0.252 0.112 0.000 0.000 chr3 154267546 154329487
DHX37 184 48 41 32 0 0 0.713 0.186 0.159 0.124 0.000 0.000 chr12 124941826 124994131
DHX38 189 59 61 40 0 0 0.733 0.229 0.236 0.155 0.000 0.000 chr16 72088847 72117912
DHX40 161 52 75 41 0 0 0.624 0.202 0.291 0.159 0.000 0.000 chr17 59560610 59613345
DHX57 141 37 92 55 0 0 0.547 0.143 0.357 0.213 0.000 0.000 chr2 38792729 38880934
DHX58 175 51 76 48 0 0 0.678 0.198 0.295 0.186 0.000 0.000 chr17 42096411 42117714