Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view DEFB4A 47 10 110 36 6 2 0.182 0.039 0.426 0.140 0.023 0.008 chr8 7889677 7901716
view DEFB4B 71 29 22 9 165 67 0.275 0.112 0.085 0.035 0.640 0.260 chr8 7409855 7421863
view DEGS1 212 76 39 24 1 0 0.822 0.295 0.151 0.093 0.004 0.000 chr1 224178240 224198441
view DEGS2 219 73 32 26 1 0 0.849 0.283 0.124 0.101 0.004 0.000 chr14 100138957 100164645
view DEK 181 56 65 40 0 0 0.702 0.217 0.252 0.155 0.000 0.000 chr6 18218860 18269530
view DELE1 183 52 63 42 1 0 0.709 0.202 0.244 0.163 0.004 0.000 chr5 141918871 141947047
view DENND10 186 65 55 30 0 0 0.721 0.252 0.213 0.116 0.000 0.000 chr10 119099113 119142984
view DENND11 172 56 74 41 0 0 0.667 0.217 0.287 0.159 0.000 0.000 chr7 141651728 141707166
view DENND1A 80 6 116 64 0 0 0.310 0.023 0.450 0.248 0.000 0.000 chr9 123374658 123935126
view DENND1B 139 45 93 50 0 0 0.539 0.174 0.360 0.194 0.000 0.000 chr1 197499748 197780480
view DENND1C 209 66 42 33 0 0 0.810 0.256 0.163 0.128 0.000 0.000 chr19 6462207 6486787
view DENND2A 126 14 92 66 0 0 0.488 0.054 0.357 0.256 0.000 0.000 chr7 140513420 140645813
view DENND2B 175 56 61 36 0 0 0.678 0.217 0.236 0.140 0.000 0.000 chr11 8688352 8815674
view DENND2C 149 43 92 54 0 0 0.578 0.167 0.357 0.209 0.000 0.000 chr1 114577850 114675049
view DENND2D 235 88 19 14 1 1 0.911 0.341 0.074 0.054 0.004 0.004 chr1 111180969 111205646
view DENND3 194 61 46 31 0 0 0.752 0.236 0.178 0.120 0.000 0.000 chr8 141123589 141200804
view DENND4A 151 45 92 55 0 0 0.585 0.174 0.357 0.213 0.000 0.000 chr15 65654123 65797293
view DENND4B 192 66 59 33 0 0 0.744 0.256 0.229 0.128 0.000 0.000 chr1 153924501 153951718
view DENND4C 145 32 77 47 0 0 0.562 0.124 0.298 0.182 0.000 0.000 chr9 19225693 19379281
view DENND5A 141 28 90 56 0 0 0.547 0.109 0.349 0.217 0.000 0.000 chr11 9133825 9270350
view DENND5B 153 45 75 42 0 0 0.593 0.174 0.291 0.163 0.000 0.000 chr12 31377226 31596136
view DENND6A 165 50 74 48 0 0 0.640 0.194 0.287 0.186 0.000 0.000 chr3 57620454 57698077
view DENND6B 162 43 71 42 0 0 0.628 0.167 0.275 0.163 0.000 0.000 chr22 50304030 50332012
view DENR 181 54 68 45 0 0 0.702 0.209 0.264 0.174 0.000 0.000 chr12 122747824 122776064
view DEPDC1B 145 44 95 51 0 0 0.562 0.171 0.368 0.198 0.000 0.000 chr5 60591912 60705166
view DEPDC1 181 59 69 40 0 0 0.702 0.229 0.267 0.155 0.000 0.000 chr1 68469152 68502082
view DEPDC4 178 48 70 49 0 0 0.690 0.186 0.271 0.190 0.000 0.000 chr12 100235062 100272079
view DEPDC5 101 16 119 72 0 0 0.391 0.062 0.461 0.279 0.000 0.000 chr22 31749019 31913033
view DEPDC7 210 83 45 19 0 0 0.814 0.322 0.174 0.074 0.000 0.000 chr11 33010878 33038582
view DEPP1 211 74 46 30 0 0 0.818 0.287 0.178 0.116 0.000 0.000 chr10 44971128 44983809
view DEPTOR 98 8 111 73 0 0 0.380 0.031 0.430 0.283 0.000 0.000 chr8 119868722 120055918
view DERA 128 33 80 50 0 0 0.496 0.128 0.310 0.194 0.000 0.000 chr12 15906332 16042381
view DERL1 206 81 45 21 0 0 0.798 0.314 0.174 0.081 0.000 0.000 chr8 123008170 123047302
view DERL2 213 77 42 26 0 0 0.826 0.298 0.163 0.101 0.000 0.000 chr17 5466254 5491178
view DERL3 215 73 37 27 0 0 0.833 0.283 0.143 0.105 0.000 0.000 chr22 23829503 23844006
view DERPC 172 38 77 58 0 0 0.667 0.147 0.298 0.225 0.000 0.000 chr16 69113010 69137588
view DESI1 153 40 78 44 0 0 0.593 0.155 0.302 0.171 0.000 0.000 chr22 41593028 41626043
view DESI2 179 57 65 40 0 0 0.694 0.221 0.252 0.155 0.000 0.000 chr1 244648126 244714033
view DES 187 59 65 44 2 0 0.725 0.229 0.252 0.171 0.008 0.000 chr2 219413377 219431734
view DET1 200 72 48 27 0 0 0.775 0.279 0.186 0.105 0.000 0.000 chr15 88507480 88551681
view DEUP1 183 68 57 30 0 0 0.709 0.264 0.221 0.116 0.000 0.000 chr11 93325742 93443470
view DEXI 226 86 30 17 1 1 0.876 0.333 0.116 0.066 0.004 0.004 chr16 10923891 10947468
view DFFA 218 76 37 26 0 0 0.845 0.295 0.143 0.101 0.000 0.000 chr1 10451522 10477529
view DFFB 201 64 46 33 0 0 0.779 0.248 0.178 0.128 0.000 0.000 chr1 3852476 3890429
view DGAT1 184 52 60 43 1 0 0.713 0.202 0.233 0.167 0.004 0.000 chr8 144309584 144331852
view DGAT2L6 72 15 180 87 0 0 0.279 0.058 0.698 0.337 0.000 0.000 chrX 70172483 70210704
view DGAT2 161 54 81 39 0 0 0.624 0.209 0.314 0.151 0.000 0.000 chr11 75763778 75806534
view DGCR2 171 50 66 41 0 0 0.663 0.194 0.256 0.159 0.000 0.000 chr22 19031286 19127412
view DGCR6L 195 67 54 30 0 0 0.756 0.260 0.209 0.116 0.000 0.000 chr22 20309238 20325060
view DGCR6 206 67 43 32 3 0 0.798 0.260 0.167 0.124 0.012 0.000 chr22 18901320 18917088