Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view DLGAP4 71 10 118 59 0 0 0.275 0.039 0.457 0.229 0.000 0.000 chr20 36301339 36533633
view DLGAP5 180 65 61 28 0 0 0.698 0.252 0.236 0.109 0.000 0.000 chr14 55143135 55196585
view DLK1 211 71 42 29 0 0 0.818 0.275 0.163 0.112 0.000 0.000 chr14 100721892 100743224
view DLK2 184 58 67 42 1 1 0.713 0.225 0.260 0.163 0.004 0.004 chr6 43445352 43460548
view DLL1 206 69 49 34 1 0 0.798 0.267 0.190 0.132 0.004 0.000 chr6 170277206 170296078
view DLL3 213 80 40 20 0 0 0.826 0.310 0.155 0.078 0.000 0.000 chr19 39493947 39513469
view DLL4 184 52 69 49 0 0 0.713 0.202 0.267 0.190 0.000 0.000 chr15 40924340 40944073
view DLST 195 69 57 30 0 0 0.756 0.267 0.221 0.116 0.000 0.000 chr14 74876916 74908743
view DLX1 211 73 47 32 0 0 0.818 0.283 0.182 0.124 0.000 0.000 chr2 172080507 172094674
view DLX2 194 61 62 42 0 0 0.752 0.236 0.240 0.163 0.000 0.000 chr2 172094438 172107900
view DLX3 218 79 36 24 1 0 0.845 0.306 0.140 0.093 0.004 0.000 chr17 49985005 50000224
view DLX4 201 68 47 28 0 0 0.779 0.264 0.182 0.109 0.000 0.000 chr17 49964190 49979959
view DLX5 223 84 33 20 1 0 0.864 0.326 0.128 0.078 0.004 0.000 chr7 97015396 97029831
view DLX6 203 72 55 33 0 0 0.787 0.279 0.213 0.128 0.000 0.000 chr7 97000553 97016040
view DMAC1 236 89 20 15 1 0 0.915 0.345 0.078 0.058 0.004 0.000 chr9 7791500 7804778
view DMAC2L 199 63 52 37 0 0 0.771 0.244 0.202 0.143 0.000 0.000 chr14 50307324 50332957
view DMAC2 212 68 37 28 0 0 0.822 0.264 0.143 0.109 0.000 0.000 chr19 41426318 41444912
view DMAP1 203 70 51 31 0 0 0.787 0.271 0.198 0.120 0.000 0.000 chr1 44208471 44225673
view DMBT1 140 47 84 41 0 0 0.543 0.182 0.326 0.159 0.000 0.000 chr10 122555754 122648736
view DMBX1 214 77 36 24 0 0 0.829 0.298 0.140 0.093 0.000 0.000 chr1 46484836 46521216
view DMC1 161 58 83 41 0 0 0.624 0.225 0.322 0.159 0.000 0.000 chr22 38513948 38575183
view DMD 9 0 171 60 0 0 0.035 0.000 0.663 0.233 0.000 0.000 chrX 31114222 33216549
view DMGDH 185 64 52 31 0 0 0.717 0.248 0.202 0.120 0.000 0.000 chr5 78992564 79074674
view DMKN 220 77 33 23 0 0 0.853 0.298 0.128 0.089 0.000 0.000 chr19 35492220 35518649
view DMP1 214 80 42 24 0 0 0.829 0.310 0.163 0.093 0.000 0.000 chr4 87645280 87669357
view DMPK 207 72 43 25 1 1 0.802 0.279 0.167 0.097 0.004 0.004 chr19 45764717 45787490
view DMRT1 152 35 70 47 0 0 0.589 0.136 0.271 0.182 0.000 0.000 chr9 836697 974090
view DMRT2 243 94 14 10 0 0 0.942 0.364 0.054 0.039 0.000 0.000 chr9 1045357 1062552
view DMRT3 228 84 23 15 1 1 0.884 0.326 0.089 0.058 0.004 0.004 chr9 971655 996732
view DMRTA1 205 70 49 31 0 0 0.795 0.271 0.190 0.120 0.000 0.000 chr9 22441824 22460740
view DMRTA2 154 37 103 68 0 0 0.597 0.143 0.399 0.264 0.000 0.000 chr1 50412550 50428443
view DMRTB1 196 78 58 24 0 0 0.760 0.302 0.225 0.093 0.000 0.000 chr1 53454399 53472488
view DMRTC1B 1 0 52 11 0 0 0.004 0.000 0.202 0.043 0.000 0.000 chrX 72771890 72853803
view DMRTC1 12 4 83 23 0 0 0.047 0.016 0.322 0.089 0.000 0.000 chrX 72867025 72948837
view DMRTC2 200 73 55 30 0 0 0.775 0.283 0.213 0.116 0.000 0.000 chr19 41840042 41857333
view DMTF1 180 68 69 31 0 0 0.698 0.264 0.267 0.120 0.000 0.000 chr7 87147453 87201325
view DMTN 161 34 86 62 0 0 0.624 0.132 0.333 0.240 0.000 0.000 chr8 22051814 22087525
view DMWD 219 81 31 17 1 0 0.849 0.314 0.120 0.066 0.004 0.000 chr19 45777947 45797845
view DMXL1 118 12 91 65 0 0 0.457 0.047 0.353 0.252 0.000 0.000 chr5 119066087 119254127
view DMXL2 172 67 68 31 0 0 0.667 0.260 0.264 0.120 0.000 0.000 chr15 51442791 51627771
view DNA2 162 54 77 41 0 0 0.628 0.209 0.298 0.159 0.000 0.000 chr10 68409064 68476973
view DNAAF10 215 75 38 25 0 0 0.833 0.291 0.147 0.097 0.000 0.000 chr2 68124805 68162527
view DNAAF11 137 40 91 50 0 0 0.531 0.155 0.353 0.194 0.000 0.000 chr8 132565416 132680545
view DNAAF1 227 81 24 18 0 0 0.880 0.314 0.093 0.070 0.000 0.000 chr16 84140308 84182918
view DNAAF2 175 46 80 56 0 0 0.678 0.178 0.310 0.217 0.000 0.000 chr14 49620174 49640244
view DNAAF3 198 58 49 37 1 0 0.767 0.225 0.190 0.143 0.004 0.000 chr19 55153665 55171613
view DNAAF4 168 48 63 43 0 0 0.651 0.186 0.244 0.167 0.000 0.000 chr15 55425308 55513234
view DNAAF5 188 58 54 37 0 0 0.729 0.225 0.209 0.143 0.000 0.000 chr7 721699 791475
view DNAAF6 83 28 168 73 0 0 0.322 0.109 0.651 0.283 0.000 0.000 chrX 107201611 107249247
view DNAAF8 192 59 52 35 0 0 0.744 0.229 0.202 0.136 0.000 0.000 chr16 4729537 4754396