Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
Chr Start End
view EDRF1 160 45 80 51 0 0 0.620 0.174 0.310 0.198 0.000 0.000 chr10 125714709 125769139
view EEA1 121 10 120 83 0 0 0.469 0.039 0.465 0.322 0.000 0.000 chr12 92765637 92934295
view EED 195 75 54 26 0 0 0.756 0.291 0.209 0.101 0.000 0.000 chr11 86239753 86283810
view EEF1A1 211 81 42 20 2 2 0.818 0.314 0.163 0.078 0.008 0.008 chr6 73510750 73526032
view EEF1A2 186 51 48 36 0 0 0.721 0.198 0.186 0.140 0.000 0.000 chr20 63483014 63504083
view EEF1AKMT1 173 53 58 35 0 0 0.671 0.205 0.225 0.136 0.000 0.000 chr13 20723731 20778961
view EEF1AKMT2 178 70 68 26 0 0 0.690 0.271 0.264 0.101 0.000 0.000 chr10 124752834 124796887
view EEF1AKMT3 180 52 74 50 0 0 0.698 0.202 0.287 0.194 0.000 0.000 chr12 57767614 57787541
view EEF1AKMT4 188 56 63 43 1 0 0.729 0.217 0.244 0.167 0.004 0.000 chr3 184244672 184263759
view EEF1B2 179 59 76 43 0 0 0.694 0.229 0.295 0.167 0.000 0.000 chr2 206154895 206167928
view EEF1D 194 67 56 31 0 0 0.752 0.260 0.217 0.120 0.000 0.000 chr8 143574728 143602415
view EEF1E1 220 84 34 19 0 0 0.853 0.326 0.132 0.074 0.000 0.000 chr6 8074395 8107548
view EEF1G 130 25 119 74 0 0 0.504 0.097 0.461 0.287 0.000 0.000 chr11 62554596 62578891
view EEF2KMT 220 73 35 30 0 0 0.853 0.283 0.136 0.116 0.000 0.000 chr16 5079284 5102795
view EEF2K 144 40 82 46 0 0 0.558 0.155 0.318 0.178 0.000 0.000 chr16 22201278 22293738
view EEF2 201 64 49 35 1 0 0.779 0.248 0.190 0.136 0.004 0.000 chr19 3971056 3990463
view EEFSEC 135 40 87 46 0 0 0.523 0.155 0.337 0.178 0.000 0.000 chr3 128148481 128413646
view EEIG1 170 56 74 40 0 0 0.659 0.217 0.287 0.155 0.000 0.000 chr9 127935582 127985989
view EEIG2 135 49 94 44 0 0 0.523 0.190 0.364 0.171 0.000 0.000 chr1 108555100 108644322
view EEPD1 172 51 48 31 0 0 0.667 0.198 0.186 0.120 0.000 0.000 chr7 36148254 36306538
view EFCAB10 213 75 43 28 0 0 0.826 0.291 0.167 0.109 0.000 0.000 chr7 105560124 105586493
view EFCAB11 141 39 73 48 0 0 0.547 0.151 0.283 0.186 0.000 0.000 chr14 89789669 89959730
view EFCAB12 192 57 58 42 0 0 0.744 0.221 0.225 0.163 0.000 0.000 chr3 129396321 129433636
view EFCAB13 177 68 69 32 0 0 0.686 0.264 0.267 0.124 0.000 0.000 chr17 47318955 47446312
view EFCAB14 186 65 62 34 0 0 0.721 0.252 0.240 0.132 0.000 0.000 chr1 46670159 46724114
view EFCAB2 144 48 89 44 0 0 0.558 0.186 0.345 0.171 0.000 0.000 chr1 244964682 245092837
view EFCAB3 184 61 64 37 0 0 0.713 0.236 0.248 0.143 0.000 0.000 chr17 62375553 62421480
view EFCAB5 123 22 112 72 0 0 0.477 0.085 0.434 0.279 0.000 0.000 chr17 29936634 30113452
view EFCAB6 144 44 87 46 0 0 0.558 0.171 0.337 0.178 0.000 0.000 chr22 43523778 43817305
view EFCAB7 186 65 63 34 1 1 0.721 0.252 0.244 0.132 0.004 0.004 chr1 63518525 63577693
view EFCAB8 141 32 92 59 0 0 0.547 0.124 0.357 0.229 0.000 0.000 chr20 32853923 32966845
view EFCAB9 203 70 51 31 0 0 0.787 0.271 0.198 0.120 0.000 0.000 chr5 172189172 172208454
view EFCC1 176 51 64 42 0 0 0.682 0.198 0.248 0.163 0.000 0.000 chr3 128996304 129045742
view EFEMP1 174 58 63 33 0 0 0.674 0.225 0.244 0.128 0.000 0.000 chr2 55860967 55928782
view EFEMP2 186 62 67 38 1 1 0.721 0.240 0.260 0.147 0.004 0.004 chr11 65861441 65877800
view EFHB 171 43 72 50 0 0 0.663 0.167 0.279 0.194 0.000 0.000 chr3 19874472 19939217
view EFHC1 197 67 54 33 0 0 0.764 0.260 0.209 0.128 0.000 0.000 chr6 52415342 52502198
view EFHC2 47 6 182 85 0 0 0.182 0.023 0.705 0.329 0.000 0.000 chrX 44142872 44348672
view EFHD1 190 62 50 32 0 0 0.736 0.240 0.194 0.124 0.000 0.000 chr2 232628604 232687776
view EFHD2 211 63 38 34 0 0 0.818 0.244 0.147 0.132 0.000 0.000 chr1 15404888 15435339
view EFL1 183 65 45 21 0 0 0.709 0.252 0.174 0.081 0.000 0.000 chr15 82125233 82267734
view EFNA1 174 41 80 60 0 0 0.674 0.159 0.310 0.233 0.000 0.000 chr1 155122876 155139899
view EFNA2 146 23 76 54 0 0 0.566 0.089 0.295 0.209 0.000 0.000 chr19 1280873 1306431
view EFNA3 166 38 88 63 0 0 0.643 0.147 0.341 0.244 0.000 0.000 chr1 155073837 155092538
view EFNA4 166 33 87 68 0 0 0.643 0.128 0.337 0.264 0.000 0.000 chr1 155058740 155074553
view EFNA5 95 18 86 50 0 0 0.368 0.070 0.333 0.194 0.000 0.000 chr5 107371894 107675937
view EFNB1 105 32 148 70 1 0 0.407 0.124 0.574 0.271 0.004 0.000 chrX 68824021 68847160
view EFNB2 177 53 55 38 0 0 0.686 0.205 0.213 0.147 0.000 0.000 chr13 106484745 106540662
view EFNB3 216 71 42 34 0 0 0.837 0.275 0.163 0.132 0.000 0.000 chr17 7700202 7716372
view EFR3A 205 73 40 26 0 0 0.795 0.283 0.155 0.101 0.000 0.000 chr8 131899093 132018642