geneid | 65057 |
---|---|
ensemblid | ENSG00000102977.18 |
hgncid | 25070 |
symbol | ACD |
name | ACD shelterin complex subunit and telomerase recruitment factor |
refseq_nuc | NM_001082486.2 |
refseq_prot | NP_001075955.2 |
ensembl_nuc | ENST00000620761.6 |
ensembl_prot | ENSP00000478084.1 |
mane_status | MANE Select |
chr | chr16 |
start | 67657512 |
end | 67660260 |
strand | - |
ver | v1.2 |
region | chr16:67657512-67660260 |
region5000 | chr16:67652512-67665260 |
regionname0 | ACD_chr16_67657512_67660260 |
regionname5000 | ACD_chr16_67652512_67665260 |
chr:pos | ref | alt | af | annotation | impact | samples | AHAPIDS | ACHAPIDS | ACTHAPIDS | ACTGHAPIDS | ac | an | len | genename | geneid | featuretype | featureid | transcript_biotype | rank | hgvs_c | hgvs_p | cdna_pos_length | cds_pos_length | aa_pos_length | distance | status |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr16:67657765
|
A | G | 0.5933 | missense_variant | MODERATE | HG00438.hp1 HG00438.hp2 HG00609.hp2 others(156): Show |
a0001a0003a0004others(1): Show | a0001c0001a0001c0003a0001c0007others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(7): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0005others(18): Show | 159 | 268 | 0 | ACD | ENSG00000102977.18 | transcript | ENST00000620761.6 | protein_coding | 11/12 | c.1295T>C | p.Val432Ala | 1335/1511 | 1295/1377 | 432/458 |
genename | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2
|
ahapid | alen | total | AFR | AMR | EAS | EUR | SAS | aseq | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ACD | 0/0 | a0001 | 458 | 154 | 79 | 31 | 23 | 4 | 17 | subcellular location copy fasta | chr16 | 67652512 | 67665260 |
Click to load Haplotype QTL data...
pos | S. Strand |
E# Exon Number |
max | median | min | diff | type | haplotypeid | max_hap_list | min_hap_list | symbol | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
67660122 | - | 1 | -0.9307 | -0.9237 | -0.8699 | 0.0608 | acceptor | a0001 | HG03041.hp2 HG03225.hp1 |
HG02071.hp2 | ACD | chr16 | 67652512 | 67665260 |
67659903 | - | 2 | -0.9898 | -0.9887 | -0.9740 | 0.0158 | acceptor | a0001 | NA19240.hp2 | HG02071.hp2 | ACD | chr16 | 67652512 | 67665260 |
67660045 | - | 2 | 0.9670 | 0.9563 | 0.0002 | 0.9668 | donor | a0001 | NA18522.hp2 | HG02071.hp2 | ACD | chr16 | 67652512 | 67665260 |
67659702 | - | 3 | -0.9957 | -0.9955 | -0.9946 | 0.0011 | acceptor | a0001 | NA19240.hp2 | HG02071.hp2 | ACD | chr16 | 67652512 | 67665260 |
67659795 | - | 3 | 0.9950 | 0.9934 | 0.9930 | 0.0020 | donor | a0001 | NA19240.hp2 | HG02071.hp2 | ACD | chr16 | 67652512 | 67665260 |
67659537 | - | 4 | -0.9975 | -0.9974 | -0.9918 | 0.0056 | acceptor | a0001 | HG02486.hp2 HG03225.hp2 NA18977.hp2 |
HG02886.hp1 HG02895.hp1 HG02897.hp2 |
ACD | chr16 | 67652512 | 67665260 |
67659613 | - | 4 | 0.9963 | 0.9962 | 0.9947 | 0.0017 | donor | a0001 | NA18522.hp2 | HG02886.hp1 HG02895.hp1 HG02897.hp2 |
ACD | chr16 | 67652512 | 67665260 |
67659375 | - | 5 | -0.9442 | -0.9394 | -0.9354 | 0.0088 | acceptor | a0001 | NA19240.hp2 | HG02280.hp1 HG03130.hp2 |
ACD | chr16 | 67652512 | 67665260 |
67659419 | - | 5 | 0.9624 | 0.9594 | 0.9462 | 0.0162 | donor | a0001 | HG02965.hp1 | NA20129.hp1 | ACD | chr16 | 67652512 | 67665260 |
67659229 | - | 6 | -0.9318 | -0.9169 | -0.9001 | 0.0318 | acceptor | a0001 | HG03041.hp2 HG03225.hp1 |
HG02280.hp1 HG03130.hp2 |
ACD | chr16 | 67652512 | 67665260 |
67659263 | - | 6 | 0.9083 | 0.8973 | 0.8698 | 0.0385 | donor | a0001 | NA19240.hp2 | HG02280.hp1 HG03130.hp2 |
ACD | chr16 | 67652512 | 67665260 |
67658928 | - | 7 | -0.9687 | -0.9612 | -0.9581 | 0.0107 | acceptor | a0001 | HG03041.hp2 HG03225.hp1 |
HG02071.hp2 | ACD | chr16 | 67652512 | 67665260 |
67659079 | - | 7 | 0.9803 | 0.9740 | 0.9695 | 0.0108 | donor | a0001 | HG03041.hp2 HG03225.hp1 |
NA20129.hp1 | ACD | chr16 | 67652512 | 67665260 |
67658720 | - | 8 | -0.8504 | -0.7781 | -0.7609 | 0.0894 | acceptor | a0001 | HG03041.hp2 HG03225.hp1 |
HG02886.hp1 HG02895.hp1 HG02897.hp2 |
ACD | chr16 | 67652512 | 67665260 |
67658816 | - | 8 | 0.8662 | 0.8057 | 0.7965 | 0.0697 | donor | a0001 | NA19240.hp2 | HG02886.hp1 HG02895.hp1 HG02897.hp2 |
ACD | chr16 | 67652512 | 67665260 |
67658555 | - | 9 | -0.9291 | -0.8800 | -0.8375 | 0.0916 | acceptor | a0001 | NA19240.hp2 | NA20129.hp1 | ACD | chr16 | 67652512 | 67665260 |
67658641 | - | 9 | 0.9423 | 0.9069 | 0.8105 | 0.1318 | donor | a0001 | HG03041.hp2 HG03225.hp1 |
NA20129.hp1 | ACD | chr16 | 67652512 | 67665260 |
67657986 | - | 10 | -0.8242 | -0.7337 | -0.7045 | 0.1197 | acceptor | a0001 | HG03225.hp1 | HG02258.hp2 | ACD | chr16 | 67652512 | 67665260 |
67658362 | - | 10 | 0.7171 | 0.6690 | 0.6418 | 0.0753 | donor | a0001 | HG03041.hp2 HG03225.hp1 |
HG02886.hp1 HG02895.hp1 HG02897.hp2 |
ACD | chr16 | 67652512 | 67665260 |
67657762 | - | 11 | -0.9352 | -0.7408 | -0.6995 | 0.2357 | acceptor | a0001 | HG03041.hp2 | HG00738.hp2 HG00741.hp1 HG02027.hp2 HG02735.hp1 HG04199.hp2 others(2): Show |
ACD | chr16 | 67652512 | 67665260 |
67657853 | - | 11 | 0.9630 | 0.8240 | 0.7860 | 0.1770 | donor | a0001 | NA19240.hp2 | HG02895.hp1 | ACD | chr16 | 67652512 | 67665260 |
67657684 | - | 12 | 0.6469 | 0.5678 | 0.4312 | 0.2157 | donor | a0001 | HG03041.hp2 | HG02258.hp2 | ACD | chr16 | 67652512 | 67665260 |
pos | annotationhgvs_chgvs_p | clinvarid | clnsig | geneinfo | mc | clndisdb | strand strand
|
ahapid ahapid_count
|
chapid chapid count
|
thapid thapid_count
|
ghapid ghapid_count
|
AHAPIDS ahapids
|
ACHAPIDS achapids
|
ACTHAPIDS acthapids
|
ACTGHAPIDS actghapids
|
haplotypeids haplotypeids
|
impact | chr | ref | alt | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
67653021:splice 67653021:variant goto | c.*4585C>T | 1165746 | Conflicting_classifications_of_pathogenicity | CARMIL2:146206 | SO:0001583 missense_variant |
.|MeSH:D030342 MedGen:C0950123|MedGen:C3661900 |
- | 1 | 1 | 1 | 1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG01175.hp2 | MODIFIER | chr16 | G | A | TogoVar |
67656548:splice 67656548:variant goto | c.*1058A>G | 781208 | Benign | CARMIL2:146206 | SO:0001819 synonymous_variant |
MedGen:C3661900 | - | 1 | 1 | 1 | 1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | NA18522.hp2 | MODIFIER | chr16 | T | C | TogoVar |
67657291:splice 67657291:variant goto | c.*315G>A | 773873 | Benign | CARMIL2:146206 | SO:0001819 synonymous_variant |
MedGen:C3661900|. | - | 1 | 1 | 1 | 1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00609.hp2 HG02080.hp2 NA18977.hp2 NA19010.hp2 NA19081.hp2 |
MODIFIER | chr16 | C | T | TogoVar |
67657355:splice 67657355:variant goto | c.*251G>A | 1317831 | Benign/Likely_benign | ACD:65057 CARMIL2:146206 |
SO:0001627 intron_variant |
MONDO:MONDO:0029134 MedGen:C4748304 OMIM:618131 Orphanet:542301|MedGen:C3661900 |
- | 1 | 1 | 1 | 1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
MODIFIER | chr16 | C | T | TogoVar |
67660363:splice 67660363:variant goto | c.-143G>C | 2624825 | Likely_benign | ACD:65057 LOC130059224:130059224 |
SO:0001583 missense_variant |
MeSH:D030342 MedGen:C0950123 |
- | 1 | 1 | 1 | 1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | NA18977.hp2 | MODIFIER | chr16 | C | G | TogoVar |
67660364:splice 67660364:variant goto | c.-144C>T | 1736307 | Uncertain_significance | ACD:65057 LOC130059224:130059224 |
SO:0001583 missense_variant |
MeSH:D030342 MedGen:C0950123|MONDO:MONDO:0014690 MedGen:C4225284 OMIM:616553 Orphanet:3322 |
- | 1 | 1 | 1 | 1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | NA18977.hp2 | MODIFIER | chr16 | G | A | TogoVar |
67660703:splice 67660703:variant goto | c.-483T>C | 1170359 | Benign/Likely_benign | ACD:65057 | SO:0002153 genic_upstream_transcript_variant |
MedGen:C3661900|MONDO:MONDO:0014690 MedGen:C4225284 OMIM:616553 Orphanet:3322 |
- | 1 | 1 | 1 | 1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
MODIFIER | chr16 | A | G | TogoVar |
67660954:splice 67660954:variant goto | c.-739_-735dupGCCGC | 1267204 | Benign | ACD:65057 LOC130059225:130059225 |
. | MedGen:C3661900 | - | 1 | 1 | 1 | 1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG02622.hp2 HG02886.hp2 HG02896.hp1 HG03195.hp2 HG03486.hp2 others(4): Show |
MODIFIER | chr16 | G | GGCGGC | TogoVar |
67662462:splice 67662462:variant goto | c.-2242C>T | 3056133 | Benign | PARD6A:50855 | SO:0001583 missense_variant |
. | - | 1 | 1 | 1 | 1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
MODIFIER | chr16 | G | A | TogoVar |
67657765:splice 67657765:variant goto | c.1295T>Cp.Val432Ala | 1167321 | Benign | ACD:65057 | SO:0001583 missense_variant |
MONDO:MONDO:0014690 MedGen:C4225284 OMIM:616553 Orphanet:3322|MedGen:C3661900|MedGen:CN169374 |
- | 4 | 9 | 10 | 21 | a0001a0003a0004a0005 | a0001c0001a0001c0003a0001c0007a0001c0008a0001c0009others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0001a0001c0007t0001a0001c0008t0001others(5): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0005a0001c0001t0001g0009a0001c0001t0001g0010others(16): Show | HG00438.hp1 HG00438.hp2 HG00609.hp2 HG00738.hp1 HG00738.hp2 others(154): Show |
MODERATE | chr16 | A | G | TogoVar |
67660685:splice 67660685:variant goto | c.-465G>A | 1278884 | Benign | ACD:65057 | SO:0002153 genic_upstream_transcript_variant |
MedGen:C3661900 | - | 1 | 2 | 2 | 5 | a0001 | a0001c0001a0001c0010 | a0001c0001t0001a0001c0010t0001 | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0012a0001c0001t0001g0025a0001c0010t0001g0024 | HG01109.hp2 HG02451.hp1 HG02559.hp2 HG02622.hp2 HG02647.hp2 others(24): Show |
MODIFIER | chr16 | C | T | TogoVar |
67654166:splice 67654166:variant goto | c.*3440C>T | 1166460 | Benign | CARMIL2:146206 | SO:0001819 synonymous_variant |
MedGen:C3661900 | - | 1 | 1 | 1 | 2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002a0001c0001t0001g0011 | HG02055.hp2 HG02145.hp1 HG02602.hp2 HG02630.hp1 HG03486.hp1 others(2): Show |
MODIFIER | chr16 | G | A | TogoVar |
67657337:splice 67657337:variant goto | c.*269C>T | 1228521 | Benign | ACD:65057 CARMIL2:146206 |
SO:0001627 intron_variant |
MedGen:C3661900 | - | 1 | 1 | 1 | 1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 | HG03017.hp1 HG03927.hp2 HG04115.hp2 HG04204.hp2 |
MODIFIER | chr16 | G | A | TogoVar |
67659534:splice 67659534:variant goto | c.413+3A>G | 1167322 | Benign | ACD:65057 | SO:0001627 intron_variant |
MONDO:MONDO:0014690 MedGen:C4225284 OMIM:616553 Orphanet:3322|MedGen:C3661900|MedGen:CN169374 |
- | 2 | 4 | 4 | 8 | a0001a0003 | a0001c0001a0001c0003a0001c0010a0003c0004 | a0001c0001t0001a0001c0003t0001a0001c0010t0001a0003c0004t0001 | a0001c0001t0001g0003a0001c0001t0001g0010a0001c0001t0001g0011a0001c0001t0001g0012a0001c0001t0001g0025others(3): Show | HG00738.hp1 HG01109.hp2 HG01433.hp1 HG02145.hp1 HG02145.hp2 others(42): Show |
LOW | chr16 | T | C | TogoVar |
67660837:splice 67660837:variant goto | c.-617A>G | 1804577 | Likely_benign | ACD:65057 LOC130059225:130059225 |
. | MedGen:C3661900 | - | 1 | 1 | 1 | 1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0005 | HG03098.hp2 | MODIFIER | chr16 | T | C | TogoVar |
67657742:splice 67657742:variant goto | c.1298+20C>A | 1166998 | Benign | ACD:65057 | SO:0001627 intron_variant |
MedGen:C3661900|MONDO:MONDO:0014690 MedGen:C4225284 OMIM:616553 Orphanet:3322|MedGen:CN169374 |
- | 2 | 3 | 4 | 5 | a0001a0004 | a0001c0001a0001c0003a0004c0005 | a0001c0001t0001a0001c0001t0002a0001c0003t0001a0004c0005t0001 | a0001c0001t0001g0005a0001c0001t0002g0004a0001c0003t0001g0007a0001c0003t0001g0020a0004c0005t0001g0014 | HG00438.hp2 HG00738.hp2 HG00741.hp1 HG01099.hp2 HG01167.hp1 others(36): Show |
MODIFIER | chr16 | G | T | TogoVar |
67653086:splice 67653086:variant goto | c.*4520C>T | 1630013 | Likely_benign | CARMIL2:146206 | SO:0001819 synonymous_variant |
MedGen:C3661900 | - | 1 | 1 | 1 | 1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0009 | HG02965.hp1 HG03540.hp1 |
MODIFIER | chr16 | G | A | TogoVar |
67659180:splice 67659180:variant goto | c.493+49T>A | 2576228 | Benign | ACD:65057 | SO:0001627 intron_variant |
MedGen:CN169374 | - | 1 | 1 | 1 | 1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0010 | HG02280.hp1 HG03130.hp2 |
MODIFIER | chr16 | A | T | TogoVar |
67654661:splice 67654661:variant goto | c.*2945T>A | 1599730 | Conflicting_classifications_of_pathogenicity | CARMIL2:146206 | SO:0001583 missense_variant |
MedGen:C3661900|. | - | 1 | 1 | 1 | 1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0011 | HG02145.hp1 | MODIFIER | chr16 | A | T | TogoVar |
67658470:splice 67658470:variant goto | c.829+85G>A | 1804531 | Likely_benign | ACD:65057 | SO:0001627 intron_variant |
MedGen:C3661900 | - | 1 | 1 | 1 | 1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0011 | HG02145.hp1 HG02630.hp1 |
MODIFIER | chr16 | C | T | TogoVar |
67657863:splice 67657863:variant goto | c.1207-10C>T | 475765 | Benign | ACD:65057 | SO:0001627 intron_variant |
MedGen:C3661900|MedGen:CN169374|MONDO:MONDO:0014690 MedGen:C4225284 OMIM:616553 Orphanet:3322 |
- | 1 | 1 | 1 | 2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0012a0001c0001t0001g0025 | HG03041.hp2 HG03225.hp1 NA19240.hp2 |
MODIFIER | chr16 | G | A | TogoVar |
67660317:splice 67660317:variant goto | c.-97C>T | 475767 | Benign/Likely_benign | ACD:65057 | SO:0001819 synonymous_variant |
MeSH:D030342 MedGen:C0950123|MedGen:CN169374|MONDO:MONDO:0014690 MedGen:C4225284 OMIM:616553 Orphanet:3322|MedGen:C3661900 |
- | 1 | 1 | 1 | 2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0012a0001c0001t0001g0025 | HG03041.hp2 HG03225.hp1 NA19240.hp2 |
MODIFIER | chr16 | G | A | TogoVar |
67660909:splice 67660909:variant goto | c.-689T>C | 1707123 | Likely_benign | ACD:65057 LOC130059225:130059225 |
. | MedGen:C3661900 | - | 1 | 1 | 1 | 2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0012a0001c0001t0001g0025 | HG03041.hp2 HG03225.hp1 NA19240.hp2 |
MODIFIER | chr16 | A | G | TogoVar |
67653414:splice 67653414:variant goto | c.*4192G>A | 2688511 | Benign | CARMIL2:146206 | SO:0001627 intron_variant |
MedGen:CN169374 | - | 1 | 1 | 1 | 1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0004 | HG01099.hp2 HG01255.hp1 HG01256.hp1 HG01258.hp1 HG01261.hp2 others(4): Show |
MODIFIER | chr16 | C | T | TogoVar |
67657574:splice 67657574:variant goto | c.*32T>A | 1235552 | Benign | ACD:65057 | SO:0001624 3_prime_UTR_variant |
MedGen:C3661900|MedGen:CN169374 | - | 1 | 1 | 1 | 1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0004 | HG00738.hp2 HG00741.hp1 HG01099.hp2 HG01167.hp1 HG01169.hp1 others(15): Show |
MODIFIER | chr16 | A | T | TogoVar |
67658583:splice 67658583:variant goto | c.801C>Tp.Ala267Ala | 542420 | Benign/Likely_benign | ACD:65057 | SO:0001819 synonymous_variant |
MedGen:CN169374|MONDO:MONDO:0014690 MedGen:C4225284 OMIM:616553 Orphanet:3322|MedGen:C3661900|MeSH:D030342 MedGen:C0950123|. |
- | 2 | 2 | 2 | 3 | a0001a0004 | a0001c0003a0004c0005 | a0001c0003t0001a0004c0005t0001 | a0001c0003t0001g0007a0001c0003t0001g0020a0004c0005t0001g0014 | HG02630.hp2 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG03041.hp1 |
LOW | chr16 | G | A | TogoVar |
67657612:splice 67657612:variant goto | c.1371G>Tp.Pro457Pro | 475766 | Benign/Likely_benign | ACD:65057 | SO:0001819 synonymous_variant |
MedGen:C3661900|MedGen:CN169374|MONDO:MONDO:0015356 MeSH:D009386 MedGen:C0027672 Orphanet:140162|MONDO:MONDO:0014690 MedGen:C4225284 others(2): Show |
- | 1 | 1 | 1 | 1 | a0001 | a0001c0007 | a0001c0007t0001 | a0001c0007t0001g0017 | HG02258.hp2 | LOW | chr16 | C | A | TogoVar |
67657647:splice 67657647:variant goto | c.1336C>Tp.Leu446Leu | 434065 | Benign/Likely_benign | ACD:65057 | SO:0001819 synonymous_variant |
MeSH:D030342 MedGen:C0950123|MONDO:MONDO:0014690 MedGen:C4225284 OMIM:616553 Orphanet:3322|.|MedGen:CN169374 |
- | 1 | 1 | 1 | 1 | a0001 | a0001c0008 | a0001c0008t0001 | a0001c0008t0001g0019 | HG03209.hp1 | LOW | chr16 | G | A | TogoVar |
67658196:splice 67658196:variant goto | c.996C>Tp.His332His | 1761460 | Likely_benign | ACD:65057 | SO:0001819 synonymous_variant |
MedGen:CN169374|MeSH:D030342 MedGen:C0950123|MONDO:MONDO:0014690 MedGen:C4225284 OMIM:616553 Orphanet:3322 |
- | 1 | 1 | 1 | 1 | a0001 | a0001c0009 | a0001c0009t0001 | a0001c0009t0001g0018 | HG02015.hp2 | LOW | chr16 | G | A | TogoVar |
67658565:splice 67658565:variant goto | c.819C>Tp.Pro273Pro | 542418 | Benign/Likely_benign | ACD:65057 | SO:0001819 synonymous_variant |
MedGen:CN169374|MeSH:D030342 MedGen:C0950123|MONDO:MONDO:0014690 MedGen:C4225284 OMIM:616553 Orphanet:3322 |
- | 1 | 1 | 1 | 1 | a0001 | a0001c0010 | a0001c0010t0001 | a0001c0010t0001g0024 | NA20129.hp1 | LOW | chr16 | G | A | TogoVar |
CHR:POS | annotationhgvs_chgvs_p | disease trait-log10podds or beta | AHAPIDS ahapids
|
ACHAPIDS achapids
|
ACTHAPIDS acthapids
|
ACTGHAPIDS actghapids
|
haplotypeids haplotypeids
|
study | initial sample size/replication sample size | report genes | mapped gene | strongest snp risk allele | strand strand
|
impact | chr | ref | alt |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chr16:67657765
|
c.1295T>Cp.Val432Ala | Hemoglobin levels0.015 | a0001a0003a0004a0005 | a0001c0001a0001c0003a0001c0007a0001c0008a0001c0009others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0001a0001c0007t0001a0001c0008t0001others(5): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0005a0001c0001t0001g0009a0001c0001t0001g0010others(16): Show | HG00438.hp1 HG00438.hp2 HG00609.hp2 HG00738.hp1 HG00738.hp2 others(154): Show |
Predicted loss and gain of function mutations in A others(39): Show |
684,122 European ancestry individuals/ | ACD | ACD | rs6979-G | - | MODERATE | chr16 | A | G |
pos | genenamehgvs_chgvs_pannotation | tissueexpression gene-log10(pval)slope Tissue name in GTEx database(the target eQTL tissue name of the GTEx database)The -log10(nominal pvalue) in GTEx databaseSlope in GTEx database (positive value:alt allele has higher gene expression) |
ahapidchapidthapidghapid ahapid_countchapid_countthapid_countghapid_count
|
AHAPIDS ahapids
|
ACHAPIDS achapids
|
ACTHAPIDS acthapids
|
ACTGHAPIDS actghapids
|
haplotypeids haplotypeids
|
af allele frequency in GTEx database |
ms The number of samples with minor allele in GTEx database |
ma The number of minor allele count in GTEx database |
ver GTEx version |
vid Variant ID in GTEx database |
strand strand
|
impact | chr | ref | alt | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | E2F4 Adipose_Subcutaneous 3.998 0.169 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.034 | 48 | 49 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | E2F4 Adipose_Subcutaneous 4.019 0.168 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 49 | 50 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | E2F4 Adipose_Subcutaneous 4.019 0.168 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 49 | 50 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | KCTD19 Adipose_Subcutaneous 3.591 0.413 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.034 | 48 | 49 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | KCTD19 Adipose_Subcutaneous 3.590 0.408 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 49 | 50 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | KCTD19 Adipose_Subcutaneous 3.590 0.408 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 49 | 50 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | LRRC36 Adipose_Subcutaneous 10.776 0.751 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.034 | 48 | 49 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | LRRC36 Adipose_Subcutaneous 10.415 0.728 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 49 | 50 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | LRRC36 Adipose_Subcutaneous 10.415 0.728 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 49 | 50 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | C16orf86 Adipose_Subcutaneous 8.136 -0.404 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.034 | 48 | 49 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | C16orf86 Adipose_Subcutaneous 8.242 -0.401 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 49 | 50 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | C16orf86 Adipose_Subcutaneous 8.242 -0.401 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 49 | 50 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | RANBP10 Adipose_Subcutaneous 14.249 -0.595 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.034 | 48 | 49 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | RANBP10 Adipose_Subcutaneous 13.872 -0.580 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 49 | 50 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | RANBP10 Adipose_Subcutaneous 13.872 -0.580 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 49 | 50 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | CTRL Adipose_Subcutaneous 4.660 0.373 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.034 | 48 | 49 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | CTRL Adipose_Subcutaneous 4.618 0.366 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 49 | 50 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | CTRL Adipose_Subcutaneous 4.618 0.366 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 49 | 50 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | LCAT Adipose_Subcutaneous 4.253 0.225 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.034 | 48 | 49 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | LCAT Adipose_Subcutaneous 4.474 0.228 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 49 | 50 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | LCAT Adipose_Subcutaneous 4.474 0.228 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 49 | 50 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | NFATC3 Adipose_Subcutaneous 3.969 -0.262 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.034 | 48 | 49 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | NFATC3 Adipose_Subcutaneous 4.152 -0.265 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 49 | 50 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | NFATC3 Adipose_Subcutaneous 4.152 -0.265 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 49 | 50 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | SLC7A6OS Adipose_Subcutaneous 3.781 0.372 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.034 | 48 | 49 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | SLC7A6OS Adipose_Subcutaneous 3.769 0.367 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 49 | 50 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | SLC7A6OS Adipose_Subcutaneous 3.769 0.367 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 49 | 50 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67660954:splice 67660954:variant goto | ACDupstream_gene_variantc.-739_-735dupGC others(8): Show |
KCTD19 Adipose_Visceral_Omentum 5.613 0.689 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG02622.hp2 HG02886.hp2 HG02896.hp1 HG03195.hp2 HG03486.hp2 others(4): Show |
0.011 | 12 | 12 | 10 | chr16_67660954_G_GGCGGC_b38 | - | MODIFIER | chr16 | G | GGCGGC | TogoVar |
67664127:splice 67664127:variant goto | ACDupstream_gene_variantc.-3907G>C | KCTD19 Adipose_Visceral_Omentum 4.668 0.519 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG02622.hp2 HG02886.hp2 HG02896.hp1 HG03195.hp2 HG03225.hp2 others(4): Show |
0.015 | 17 | 17 | 10 | chr16_67664127_C_G_b38 | - | MODIFIER | chr16 | C | G | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | LRRC36 Adipose_Visceral_Omentum 6.996 0.449 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.034 | 39 | 40 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | LRRC36 Adipose_Visceral_Omentum 6.349 0.418 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 40 | 41 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67660954:splice 67660954:variant goto | ACDupstream_gene_variantc.-739_-735dupGC others(8): Show |
LRRC36 Adipose_Visceral_Omentum 11.747 1.090 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG02622.hp2 HG02886.hp2 HG02896.hp1 HG03195.hp2 HG03486.hp2 others(4): Show |
0.011 | 12 | 12 | 10 | chr16_67660954_G_GGCGGC_b38 | - | MODIFIER | chr16 | G | GGCGGC | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | LRRC36 Adipose_Visceral_Omentum 6.349 0.418 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 40 | 41 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67664127:splice 67664127:variant goto | ACDupstream_gene_variantc.-3907G>C | LRRC36 Adipose_Visceral_Omentum 14.048 0.995 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG02622.hp2 HG02886.hp2 HG02896.hp1 HG03195.hp2 HG03225.hp2 others(4): Show |
0.015 | 17 | 17 | 10 | chr16_67664127_C_G_b38 | - | MODIFIER | chr16 | C | G | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | C16orf86 Adipose_Visceral_Omentum 4.402 -0.281 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.034 | 39 | 40 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | C16orf86 Adipose_Visceral_Omentum 4.274 -0.271 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 40 | 41 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | C16orf86 Adipose_Visceral_Omentum 4.274 -0.271 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 40 | 41 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | RANBP10 Adipose_Visceral_Omentum 11.135 -0.476 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.034 | 39 | 40 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | RANBP10 Adipose_Visceral_Omentum 10.632 -0.456 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 40 | 41 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | RANBP10 Adipose_Visceral_Omentum 10.632 -0.456 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 40 | 41 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67660954:splice 67660954:variant goto | ACDupstream_gene_variantc.-739_-735dupGC others(8): Show |
ATP6V0D1 Adrenal_Gland 5.199 -0.753 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG02622.hp2 HG02886.hp2 HG02896.hp1 HG03195.hp2 HG03486.hp2 others(4): Show |
0.013 | 7 | 7 | 10 | chr16_67660954_G_GGCGGC_b38 | - | MODIFIER | chr16 | G | GGCGGC | TogoVar |
67664127:splice 67664127:variant goto | ACDupstream_gene_variantc.-3907G>C | ATP6V0D1 Adrenal_Gland 4.939 -0.695 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG02622.hp2 HG02886.hp2 HG02896.hp1 HG03195.hp2 HG03225.hp2 others(4): Show |
0.014 | 8 | 8 | 10 | chr16_67664127_C_G_b38 | - | MODIFIER | chr16 | C | G | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | RANBP10 Adrenal_Gland 4.428 -0.427 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.029 | 16 | 17 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | CTCF Artery_Aorta 3.877 0.256 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 32 | 33 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | RANBP10 Artery_Aorta 8.177 -0.384 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 32 | 33 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | RANBP10 Artery_Aorta 7.871 -0.369 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.036 | 33 | 34 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | RANBP10 Artery_Aorta 7.871 -0.369 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.036 | 33 | 34 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | CTCF Artery_Tibial 11.671 0.344 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.036 | 49 | 50 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | CTCF Artery_Tibial 11.393 0.335 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.037 | 50 | 51 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | CTCF Artery_Tibial 11.393 0.335 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.037 | 50 | 51 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | C16orf86 Artery_Tibial 5.032 -0.299 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.036 | 49 | 50 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | C16orf86 Artery_Tibial 4.820 -0.288 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.037 | 50 | 51 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | C16orf86 Artery_Tibial 4.820 -0.288 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.037 | 50 | 51 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | RANBP10 Artery_Tibial 10.545 -0.424 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.036 | 49 | 50 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | RANBP10 Artery_Tibial 10.334 -0.414 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.037 | 50 | 51 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | RANBP10 Artery_Tibial 10.334 -0.414 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.037 | 50 | 51 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67664127:splice 67664127:variant goto | ACDupstream_gene_variantc.-3907G>C | RANBP10 Artery_Tibial 3.965 -0.385 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG02622.hp2 HG02886.hp2 HG02896.hp1 HG03195.hp2 HG03225.hp2 others(4): Show |
0.016 | 22 | 22 | 10 | chr16_67664127_C_G_b38 | - | MODIFIER | chr16 | C | G | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | TSNAXIP1 Artery_Tibial 3.538 0.284 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.036 | 49 | 50 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | TSNAXIP1 Artery_Tibial 3.461 0.277 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.037 | 50 | 51 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | TSNAXIP1 Artery_Tibial 3.461 0.277 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.037 | 50 | 51 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | LCAT Artery_Tibial 4.186 0.210 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.036 | 49 | 50 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | LCAT Artery_Tibial 4.529 0.216 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.037 | 50 | 51 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | LCAT Artery_Tibial 4.529 0.216 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.037 | 50 | 51 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67664127:splice 67664127:variant goto | ACDupstream_gene_variantc.-3907G>C | PLA2G15 Artery_Tibial 3.323 -0.360 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG02622.hp2 HG02886.hp2 HG02896.hp1 HG03195.hp2 HG03225.hp2 others(4): Show |
0.016 | 22 | 22 | 10 | chr16_67664127_C_G_b38 | - | MODIFIER | chr16 | C | G | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | RANBP10 Brain_Amygdala 4.327 -0.542 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.039 | 14 | 14 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | RANBP10 Brain_Amygdala 4.327 -0.542 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.039 | 14 | 14 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | RANBP10 Brain_Amygdala 4.327 -0.542 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.039 | 14 | 14 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | RANBP10 Brain_Anterior_cingulate_cortex_BA24 4.817 -0.510 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.045 | 21 | 21 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | RANBP10 Brain_Anterior_cingulate_cortex_BA24 4.817 -0.510 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.045 | 21 | 21 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | RANBP10 Brain_Anterior_cingulate_cortex_BA24 4.817 -0.510 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.045 | 21 | 21 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | RANBP10 Brain_Caudate_basal_ganglia 5.275 -0.416 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.040 | 24 | 24 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | RANBP10 Brain_Caudate_basal_ganglia 5.275 -0.416 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.040 | 24 | 24 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | RANBP10 Brain_Caudate_basal_ganglia 5.275 -0.416 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.040 | 24 | 24 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | RANBP10 Brain_Cerebellar_Hemisphere 8.809 -0.642 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.038 | 21 | 21 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | RANBP10 Brain_Cerebellar_Hemisphere 8.809 -0.642 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.038 | 21 | 21 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | RANBP10 Brain_Cerebellar_Hemisphere 8.809 -0.642 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.038 | 21 | 21 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67660954:splice 67660954:variant goto | ACDupstream_gene_variantc.-739_-735dupGC others(8): Show |
PSMB10 Brain_Cerebellar_Hemisphere 3.915 -0.672 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG02622.hp2 HG02886.hp2 HG02896.hp1 HG03195.hp2 HG03486.hp2 others(4): Show |
0.008 | 4 | 4 | 10 | chr16_67660954_G_GGCGGC_b38 | - | MODIFIER | chr16 | G | GGCGGC | TogoVar |
67664127:splice 67664127:variant goto | ACDupstream_gene_variantc.-3907G>C | PSMB10 Brain_Cerebellar_Hemisphere 3.648 -0.513 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG02622.hp2 HG02886.hp2 HG02896.hp1 HG03195.hp2 HG03225.hp2 others(4): Show |
0.011 | 6 | 6 | 10 | chr16_67664127_C_G_b38 | - | MODIFIER | chr16 | C | G | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | RANBP10 Brain_Cerebellum 18.234 -0.857 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.044 | 23 | 23 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | RANBP10 Brain_Cerebellum 18.234 -0.857 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.044 | 23 | 23 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | RANBP10 Brain_Cerebellum 18.234 -0.857 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.044 | 23 | 23 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67664127:splice 67664127:variant goto | ACDupstream_gene_variantc.-3907G>C | RANBP10 Brain_Cerebellum 4.669 -0.891 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG02622.hp2 HG02886.hp2 HG02896.hp1 HG03195.hp2 HG03225.hp2 others(4): Show |
0.009 | 5 | 5 | 10 | chr16_67664127_C_G_b38 | - | MODIFIER | chr16 | C | G | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | GFOD2 Brain_Cortex 4.414 -0.235 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.043 | 23 | 23 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | GFOD2 Brain_Cortex 4.414 -0.235 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.043 | 23 | 23 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | GFOD2 Brain_Cortex 4.414 -0.235 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.043 | 23 | 23 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | RANBP10 Brain_Cortex 14.748 -0.765 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.043 | 23 | 23 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | RANBP10 Brain_Cortex 14.748 -0.765 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.043 | 23 | 23 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | RANBP10 Brain_Cortex 14.748 -0.765 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.043 | 23 | 23 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | RANBP10 Brain_Frontal_Cortex_BA9 4.700 -0.485 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.037 | 20 | 20 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | RANBP10 Brain_Frontal_Cortex_BA9 4.700 -0.485 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.037 | 20 | 20 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | RANBP10 Brain_Frontal_Cortex_BA9 4.700 -0.485 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.037 | 20 | 20 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | RANBP10 Brain_Hippocampus 4.104 -0.446 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.043 | 22 | 22 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | RANBP10 Brain_Hippocampus 4.104 -0.446 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.043 | 22 | 22 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | RANBP10 Brain_Hippocampus 4.104 -0.446 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.043 | 22 | 22 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | RANBP10 Brain_Hypothalamus 5.268 -0.462 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 18 | 18 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | RANBP10 Brain_Hypothalamus 5.268 -0.462 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 18 | 18 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | RANBP10 Brain_Hypothalamus 5.268 -0.462 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 18 | 18 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |
67657355:splice 67657355:variant goto | ACDdownstream_gene_variantc.*251G>A | DUS2 Brain_Hypothalamus 3.871 0.598 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 18 | 18 | 10 | chr16_67657355_C_T_b38 | - | MODIFIER | chr16 | C | T | TogoVar |
67660703:splice 67660703:variant goto | ACDupstream_gene_variantc.-483T>C | DUS2 Brain_Hypothalamus 3.871 0.598 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 18 | 18 | 10 | chr16_67660703_A_G_b38 | - | MODIFIER | chr16 | A | G | TogoVar |
67662462:splice 67662462:variant goto | ACDupstream_gene_variantc.-2242C>T | DUS2 Brain_Hypothalamus 3.871 0.598 | 1111 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01346.hp2 NA20752.hp1 |
0.035 | 18 | 18 | 10 | chr16_67662462_G_A_b38 | - | MODIFIER | chr16 | G | A | TogoVar |