| regionname | grch38/chm13v2 1/0: The haplotype type is the same as GRCh380/1: The haplotype type is the same as CHM13v20/0: The haplotype type matches neither GRCh38 nor CHM13v21/1: The haplotype type is the same on both GRCh38 and CHM13v2 |
chapid | clen | total | AFR | AMR | EAS | EUR | SAS | cseq | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
0/0 | c0002 | 1158 | 33 | 6 | 6 | 7 | 4 | 10 | copy fasta | SMARCB1 | chr22 | 23781966 | 23843009 |
|
0/0 | c0003 | 1158 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | SMARCB1 | chr22 | 23781966 | 23843009 |
|
0/0 | c0004 | 1158 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | SMARCB1 | chr22 | 23781966 | 23843009 |
|
0/0 | c0005 | 1158 | 1 | 0 | 0 | 0 | 0 | 1 | copy fasta | SMARCB1 | chr22 | 23781966 | 23843009 |
|
0/0 | c0006 | 1158 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | SMARCB1 | chr22 | 23781966 | 23843009 |
|
1/0 | c0001 | 3318 | 183 | 60 | 28 | 65 | 4 | 25 | copy fasta | SMARCC1 | chr3 | 47580269 | 47786893 |
|
0/0 | c0002 | 3318 | 28 | 0 | 9 | 14 | 0 | 5 | copy fasta | SMARCC1 | chr3 | 47580269 | 47786893 |
|
0/0 | c0003 | 3318 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | SMARCC1 | chr3 | 47580269 | 47786893 |
|
0/0 | c0004 | 3318 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | SMARCC1 | chr3 | 47580269 | 47786893 |
|
0/0 | c0005 | 3318 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | SMARCC1 | chr3 | 47580269 | 47786893 |
|
0/0 | c0006 | 3318 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | SMARCC1 | chr3 | 47580269 | 47786893 |
|
0/0 | c0007 | 3318 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | SMARCC1 | chr3 | 47580269 | 47786893 |
|
0/0 | c0008 | 3318 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | SMARCC1 | chr3 | 47580269 | 47786893 |
|
0/0 | c0009 | 3318 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | SMARCC1 | chr3 | 47580269 | 47786893 |
|
0/0 | c0010 | 3318 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | SMARCC1 | chr3 | 47580269 | 47786893 |
|
1/1 | c0001 | 3738 | 235 | 67 | 46 | 86 | 11 | 23 | copy fasta | SMARCC2 | chr12 | 56157359 | 56194483 |
|
0/0 | c0002 | 3738 | 9 | 9 | 0 | 0 | 0 | 0 | copy fasta | SMARCC2 | chr12 | 56157359 | 56194483 |
|
0/0 | c0003 | 3738 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | SMARCC2 | chr12 | 56157359 | 56194483 |
|
0/0 | c0004 | 3738 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | SMARCC2 | chr12 | 56157359 | 56194483 |
|
0/0 | c0005 | 3738 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | SMARCC2 | chr12 | 56157359 | 56194483 |
|
0/0 | c0006 | 3738 | 1 | 0 | 0 | 0 | 0 | 1 | copy fasta | SMARCC2 | chr12 | 56157359 | 56194483 |
|
0/0 | c0007 | 3738 | 1 | 0 | 0 | 0 | 1 | 0 | copy fasta | SMARCC2 | chr12 | 56157359 | 56194483 |
|
0/0 | c0008 | 3738 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | SMARCC2 | chr12 | 56157359 | 56194483 |
|
1/1 | c0001 | 1548 | 363 | 98 | 69 | 148 | 14 | 32 | copy fasta | SMARCD1 | chr12 | 50080342 | 50105707 |
|
0/0 | c0002 | 1548 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | SMARCD1 | chr12 | 50080342 | 50105707 |
|
0/0 | c0003 | 1548 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | SMARCD1 | chr12 | 50080342 | 50105707 |
|
0/0 | c0004 | 1548 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | SMARCD1 | chr12 | 50080342 | 50105707 |
|
1/1 | c0001 | 1596 | 340 | 81 | 63 | 142 | 15 | 37 | copy fasta | SMARCD2 | chr17 | 63827081 | 63847685 |
|
0/0 | c0002 | 1596 | 4 | 4 | 0 | 0 | 0 | 0 | copy fasta | SMARCD2 | chr17 | 63827081 | 63847685 |
|
0/0 | c0003 | 1596 | 3 | 3 | 0 | 0 | 0 | 0 | copy fasta | SMARCD2 | chr17 | 63827081 | 63847685 |
|
0/0 | c0004 | 1596 | 2 | 0 | 0 | 0 | 1 | 1 | copy fasta | SMARCD2 | chr17 | 63827081 | 63847685 |
|
0/0 | c0005 | 1596 | 2 | 0 | 0 | 2 | 0 | 0 | copy fasta | SMARCD2 | chr17 | 63827081 | 63847685 |
|
0/0 | c0006 | 1596 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | SMARCD2 | chr17 | 63827081 | 63847685 |
|
0/0 | c0007 | 1596 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | SMARCD2 | chr17 | 63827081 | 63847685 |
|
0/0 | c0008 | 1596 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | SMARCD2 | chr17 | 63827081 | 63847685 |
|
0/0 | c0001 | 1452 | 364 | 78 | 70 | 156 | 16 | 44 | copy fasta | SMARCD3 | chr7 | 151233780 | 151253694 |
|
0/0 | c0002 | 1452 | 10 | 10 | 0 | 0 | 0 | 0 | copy fasta | SMARCD3 | chr7 | 151233780 | 151253694 |
|
0/0 | c0003 | 1452 | 3 | 3 | 0 | 0 | 0 | 0 | copy fasta | SMARCD3 | chr7 | 151233780 | 151253694 |
|
0/0 | c0004 | 1452 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | SMARCD3 | chr7 | 151233780 | 151253694 |
|
0/0 | c0005 | 1452 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | SMARCD3 | chr7 | 151233780 | 151253694 |
|
0/0 | c0006 | 1452 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | SMARCD3 | chr7 | 151233780 | 151253694 |
|
0/0 | c0007 | 1452 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | SMARCD3 | chr7 | 151233780 | 151253694 |
|
0/0 | c0008 | 1452 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | SMARCD3 | chr7 | 151233780 | 151253694 |
|
1/1 | c0001 | 1236 | 398 | 86 | 63 | 197 | 18 | 32 | copy fasta | SMARCE1 | chr17 | 40619962 | 40652818 |
|
0/0 | c0002 | 1236 | 1 | 0 | 1 | 0 | 0 | 0 | copy fasta | SMARCE1 | chr17 | 40619962 | 40652818 |
|
0/0 | c0003 | 1236 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | SMARCE1 | chr17 | 40619962 | 40652818 |
|
0/0 | c0004 | 1236 | 1 | 1 | 0 | 0 | 0 | 0 | copy fasta | SMARCE1 | chr17 | 40619962 | 40652818 |
|
0/0 | c0005 | 1157 | 1 | 0 | 0 | 1 | 0 | 0 | copy fasta | SMARCE1 | chr17 | 40619962 | 40652818 |
|
1/1 | c0001 | 3702 | 206 | 56 | 34 | 83 | 9 | 22 | copy fasta | SMC1A | chrX | 53369149 | 53427654 |
|
0/0 | c0002 | 3702 | 2 | 2 | 0 | 0 | 0 | 0 | copy fasta | SMC1A | chrX | 53369149 | 53427654 |