Search by Genic region
Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| Item | Value |
|---|---|
| geneid | 8243 |
| ensemblid | ENSG00000072501.19 |
| hgncid | 11111 |
| symbol | SMC1A |
| name | structural maintenance of chromosomes 1A |
| refseq_nuc | NM_006306.4 |
| refseq_prot | NP_006297.2 |
| ensembl_nuc | ENST00000322213.9 |
| ensembl_prot | ENSP00000323421.3 |
| mane_status | MANE Select |
| chr | chrX |
| start | 53374149 |
| end | 53422654 |
| strand | - |
| ver | v1.2 |
| region | chrX:53374149-53422654 |
| region5000 | chrX:53369149-53427654 |
| regionname0 | SMC1A_chrX_53374149_53422654 |
| regionname5000 | SMC1A_chrX_53369149_53427654 |
| ahapid | grch38/chm13v2 | alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 1/1 | 1233 | 212 | 60 | 34 | 85 | 9 | 22 | 60 | SMC1A_chrX_53369149_53427654 | SMC1A | MGFLK others(1228): Show |
chrX | 53369149 | 53427654 |
| a0002 | 0/0 | 1233 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | MGFLK others(1228): Show |
chrX | 53369149 | 53427654 |
| achapid | grch38/chm13v2 | alen | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | aseq | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001 | 1/1 | 3699 | 207 | 57 | 34 | 83 | 9 | 22 | SMC1A_chrX_53369149_53427654 | SMC1A | ATGGG others(3694): Show |
chrX | 53369149 | 53427654 | ||
| a0001c0002 | 0/0 | 3699 | 2 | 2 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | ATGGG others(3694): Show |
chrX | 53369149 | 53427654 | ||
| a0001c0003 | 0/0 | 3699 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | ATGGG others(3694): Show |
chrX | 53369149 | 53427654 | ||
| a0001c0004 | 0/0 | 3699 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | ATGGG others(3694): Show |
chrX | 53369149 | 53427654 | ||
| a0001c0005 | 0/0 | 3699 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | ATGGG others(3694): Show |
chrX | 53369149 | 53427654 | ||
| a0002c0006 | 0/0 | 3699 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | ATGGG others(3694): Show |
chrX | 53369149 | 53427654 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001 | 1/0 | 9710 | 111 | 36 | 15 | 45 | 2 | 12 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0001t0002 | 0/0 | 9710 | 64 | 3 | 13 | 35 | 7 | 6 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0001t0003 | 0/0 | 9710 | 6 | 5 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0001t0004 | 0/0 | 9710 | 6 | 4 | 2 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0001t0005 | 0/0 | 9710 | 3 | 3 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0001t0006 | 0/0 | 9710 | 3 | 2 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0001t0007 | 0/0 | 9710 | 2 | 2 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0001t0009 | 0/0 | 9710 | 2 | 0 | 0 | 0 | 0 | 2 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0001t0010 | 0/0 | 9710 | 2 | 0 | 2 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0001t0012 | 0/1 | 9710 | 1 | 0 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0001t0013 | 0/0 | 9710 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0001t0014 | 0/0 | 9710 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0001t0015 | 0/0 | 9710 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0001t0016 | 0/0 | 9710 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0001t0017 | 0/0 | 9710 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0001t0018 | 0/0 | 9710 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0001t0019 | 0/0 | 9710 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0002t0008 | 0/0 | 9710 | 2 | 2 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0003t0011 | 0/0 | 9710 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0004t0002 | 0/0 | 9710 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0001c0005t0001 | 0/0 | 9710 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| a0002c0006t0002 | 0/0 | 9710 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | AGTTC others(9705): Show |
chrX | 53369149 | 53427654 |
| actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0001t0001g0001 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0012 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0013 | 1/0 | 1 | 0 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0014 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0015 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0016 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0017 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0018 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0019 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0020 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0021 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0022 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0023 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0024 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0025 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0026 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0027 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0028 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0029 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0030 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0031 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0032 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0033 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0034 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0035 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0036 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0037 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0038 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0039 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0040 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0041 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0042 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0043 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0045 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0046 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0047 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0048 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0049 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0051 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0052 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0053 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0054 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0055 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0056 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0057 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0058 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0059 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0060 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0061 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0062 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0063 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0064 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0065 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0067 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0068 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0069 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0070 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0071 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0073 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0074 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0075 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0076 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0077 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0078 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0079 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0080 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0081 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0082 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0083 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0084 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0085 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0086 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0087 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0089 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0090 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0091 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0092 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0093 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0094 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0095 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0102 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0103 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0104 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0105 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0106 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0107 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0108 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0110 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0111 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0112 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0113 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0116 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0117 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0118 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0119 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0120 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0123 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0127 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0128 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0131 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0133 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0134 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0135 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0136 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0137 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0138 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0139 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0140 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0142 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0001g0143 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0003 | 0/0 | 2 | 0 | 1 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0004 | 0/0 | 2 | 0 | 1 | 0 | 1 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0005 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0006 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0144 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0145 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0146 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0147 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0149 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0150 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0152 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0154 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0155 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0156 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0157 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0158 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0159 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0160 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0161 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0162 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0163 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0164 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0165 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0166 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0167 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0168 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0169 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0170 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0173 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0174 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0175 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0176 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0177 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0178 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0179 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0180 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0181 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0182 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0183 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0184 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0185 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0186 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0187 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0188 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0189 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0190 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0191 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0192 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0193 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0194 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0197 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0198 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0199 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0200 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0201 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0202 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0203 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0204 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0206 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0002g0207 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0003g0100 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0003g0114 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0003g0122 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0003g0124 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0003g0125 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0003g0126 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0004g0002 | 0/0 | 2 | 1 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0004g0098 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0004g0099 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0004g0115 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0004g0129 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0005g0007 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0005g0008 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0005g0009 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0006g0121 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0006g0130 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0006g0132 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0007g0010 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0007g0011 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0009g0151 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0009g0171 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0010g0195 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0010g0196 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0012g0088 | 0/1 | 1 | 0 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0013g0072 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0014g0050 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0015g0109 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0016g0066 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0017g0101 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0018g0205 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0001t0019g0148 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0002t0008g0096 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0002t0008g0097 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0003t0011g0141 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0004t0002g0153 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0001c0005t0001g0044 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| a0002c0006t0002g0172 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00099 | hp1 | a0001 | c0001 | t0002 | g0185 | EUR | GBR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00099 | hp2 | a0001 | c0001 | t0002 | g0190 | EUR | GBR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00140 | hp1 | a0001 | c0001 | t0002 | g0198 | EUR | GBR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00280 | hp1 | a0001 | c0001 | t0002 | g0176 | EUR | FIN | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00323 | hp1 | a0001 | c0001 | t0001 | g0140 | EUR | FIN | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00323 | hp2 | a0001 | c0001 | t0002 | g0004 | EUR | FIN | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00438 | hp1 | a0001 | c0001 | t0001 | g0087 | EAS | CHS | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00438 | hp2 | a0001 | c0001 | t0002 | g0170 | EAS | CHS | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00544 | hp1 | a0001 | c0001 | t0002 | g0203 | EAS | CHS | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00544 | hp2 | a0001 | c0005 | t0001 | g0044 | EAS | CHS | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00597 | hp1 | a0001 | c0001 | t0002 | g0204 | EAS | CHS | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00597 | hp2 | a0001 | c0001 | t0013 | g0072 | EAS | CHS | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00609 | hp1 | a0001 | c0004 | t0002 | g0153 | EAS | CHS | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00621 | hp1 | a0001 | c0001 | t0002 | g0173 | EAS | CHS | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00642 | hp1 | a0001 | c0001 | t0010 | g0195 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00673 | hp1 | a0001 | c0001 | t0001 | g0080 | EAS | CHS | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00735 | hp1 | a0001 | c0001 | t0004 | g0115 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00735 | hp2 | a0001 | c0001 | t0001 | g0058 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00738 | hp1 | a0001 | c0001 | t0001 | g0023 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00741 | hp1 | a0001 | c0001 | t0002 | g0174 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG00741 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01069 | hp1 | a0001 | c0001 | t0001 | g0052 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01071 | hp1 | a0001 | c0001 | t0002 | g0005 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01071 | hp2 | a0001 | c0001 | t0001 | g0056 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01074 | hp1 | a0001 | c0001 | t0002 | g0200 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01099 | hp1 | a0001 | c0001 | t0002 | g0004 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01106 | hp1 | a0001 | c0001 | t0001 | g0092 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01109 | hp1 | a0001 | c0001 | t0002 | g0189 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01167 | hp1 | a0001 | c0001 | t0001 | g0113 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01169 | hp1 | a0001 | c0001 | t0002 | g0003 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01169 | hp2 | a0001 | c0001 | t0001 | g0119 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01175 | hp1 | a0002 | c0006 | t0002 | g0172 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01175 | hp2 | a0001 | c0001 | t0010 | g0196 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01192 | hp1 | a0001 | c0001 | t0001 | g0069 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01243 | hp1 | a0001 | c0001 | t0006 | g0132 | AMR | PUR | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01255 | hp1 | a0001 | c0001 | t0003 | g0122 | AMR | CLM | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01256 | hp1 | a0001 | c0001 | t0002 | g0156 | AMR | CLM | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01258 | hp1 | a0001 | c0001 | t0002 | g0005 | AMR | CLM | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01261 | hp1 | a0001 | c0001 | t0002 | g0202 | AMR | CLM | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01346 | hp1 | a0001 | c0001 | t0002 | g0160 | AMR | CLM | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01346 | hp2 | a0001 | c0001 | t0001 | g0091 | AMR | CLM | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01358 | hp1 | a0001 | c0001 | t0001 | g0042 | AMR | CLM | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01433 | hp1 | a0001 | c0001 | t0001 | g0055 | AMR | CLM | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01515 | hp1 | a0001 | c0001 | t0002 | g0184 | EUR | IBS | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01884 | hp1 | a0001 | c0001 | t0001 | g0131 | AFR | ACB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01884 | hp2 | a0001 | c0001 | t0001 | g0012 | AFR | ACB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01891 | hp1 | a0001 | c0001 | t0004 | g0129 | AFR | ACB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01891 | hp2 | a0001 | c0001 | t0001 | g0134 | AFR | ACB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01928 | hp1 | a0001 | c0001 | t0002 | g0168 | AMR | PEL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01934 | hp1 | a0001 | c0001 | t0004 | g0002 | AMR | PEL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01943 | hp1 | a0001 | c0001 | t0002 | g0180 | AMR | PEL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01952 | hp1 | a0001 | c0001 | t0001 | g0060 | AMR | PEL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01981 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG01981 | hp2 | a0001 | c0001 | t0002 | g0163 | AMR | PEL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02015 | hp1 | a0001 | c0001 | t0001 | g0068 | EAS | KHV | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02027 | hp1 | a0001 | c0001 | t0002 | g0162 | EAS | KHV | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02040 | hp1 | a0001 | c0001 | t0001 | g0033 | EAS | KHV | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02055 | hp1 | a0001 | c0001 | t0001 | g0139 | AFR | ACB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02056 | hp1 | a0001 | c0001 | t0001 | g0063 | EAS | KHV | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02071 | hp1 | a0001 | c0001 | t0002 | g0192 | EAS | KHV | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02074 | hp1 | a0001 | c0001 | t0002 | g0191 | EAS | KHV | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02080 | hp1 | a0001 | c0001 | t0001 | g0074 | EAS | KHV | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02080 | hp2 | a0001 | c0001 | t0014 | g0050 | EAS | KHV | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02083 | hp1 | a0001 | c0001 | t0002 | g0181 | EAS | KHV | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02129 | hp1 | a0001 | c0001 | t0002 | g0201 | EAS | KHV | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02132 | hp1 | a0001 | c0001 | t0002 | g0006 | EAS | KHV | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02135 | hp1 | a0001 | c0001 | t0002 | g0182 | EAS | KHV | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02145 | hp1 | a0001 | c0001 | t0005 | g0007 | AFR | ACB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02155 | hp1 | a0001 | c0001 | t0002 | g0175 | EAS | CDX | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02155 | hp2 | a0001 | c0001 | t0002 | g0150 | EAS | CDX | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02257 | hp1 | a0001 | c0001 | t0003 | g0124 | AFR | ACB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02257 | hp2 | a0001 | c0001 | t0001 | g0120 | AFR | ACB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02258 | hp1 | a0001 | c0001 | t0017 | g0101 | AFR | ACB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02280 | hp1 | a0001 | c0003 | t0011 | g0141 | AFR | ACB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02280 | hp2 | a0001 | c0001 | t0001 | g0095 | AFR | ACB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02300 | hp1 | a0001 | c0001 | t0001 | g0073 | AMR | PEL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02451 | hp1 | a0001 | c0001 | t0001 | g0112 | AFR | ACB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02451 | hp2 | a0001 | c0001 | t0001 | g0102 | AFR | ACB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02572 | hp1 | a0001 | c0001 | t0001 | g0103 | AFR | GWD | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02602 | hp1 | a0001 | c0001 | t0001 | g0049 | SAS | PJL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02615 | hp1 | a0001 | c0001 | t0001 | g0047 | AFR | GWD | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02615 | hp2 | a0001 | c0001 | t0006 | g0130 | AFR | GWD | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02622 | hp1 | a0001 | c0001 | t0001 | g0110 | AFR | GWD | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02622 | hp2 | a0001 | c0001 | t0001 | g0032 | AFR | GWD | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02647 | hp1 | a0001 | c0001 | t0001 | g0061 | AFR | GWD | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02698 | hp1 | a0001 | c0001 | t0002 | g0003 | SAS | PJL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02717 | hp1 | a0001 | c0001 | t0004 | g0099 | AFR | GWD | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02735 | hp1 | a0001 | c0001 | t0001 | g0038 | SAS | PJL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02738 | hp1 | a0001 | c0001 | t0018 | g0205 | SAS | PJL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02809 | hp1 | a0001 | c0001 | t0005 | g0009 | AFR | GWD | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02809 | hp2 | a0001 | c0001 | t0001 | g0127 | AFR | GWD | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02886 | hp1 | a0001 | c0001 | t0001 | g0117 | AFR | GWD | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02886 | hp2 | a0001 | c0001 | t0001 | g0094 | AFR | GWD | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02895 | hp1 | a0001 | c0001 | t0015 | g0109 | AFR | GWD | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02922 | hp1 | a0001 | c0002 | t0008 | g0096 | AFR | ESN | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02922 | hp2 | a0001 | c0001 | t0003 | g0114 | AFR | ESN | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02965 | hp1 | a0001 | c0001 | t0003 | g0126 | AFR | ESN | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03017 | hp1 | a0001 | c0001 | t0001 | g0041 | SAS | PJL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03041 | hp1 | a0001 | c0001 | t0001 | g0135 | AFR | GWD | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03041 | hp2 | a0001 | c0001 | t0005 | g0008 | AFR | GWD | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03098 | hp1 | a0001 | c0001 | t0001 | g0020 | AFR | MSL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03130 | hp1 | a0001 | c0001 | t0003 | g0125 | AFR | ESN | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03139 | hp1 | a0001 | c0001 | t0001 | g0014 | AFR | ESN | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03209 | hp1 | a0001 | c0001 | t0004 | g0002 | AFR | MSL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03225 | hp1 | a0001 | c0001 | t0001 | g0108 | AFR | MSL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03453 | hp1 | a0001 | c0001 | t0001 | g0070 | AFR | MSL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03453 | hp2 | a0001 | c0001 | t0001 | g0118 | AFR | MSL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03486 | hp1 | a0001 | c0001 | t0006 | g0121 | AFR | MSL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03486 | hp2 | a0001 | c0001 | t0003 | g0100 | AFR | MSL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03490 | hp1 | a0001 | c0001 | t0002 | g0152 | SAS | PJL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03491 | hp1 | a0001 | c0001 | t0001 | g0022 | SAS | PJL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03491 | hp2 | a0001 | c0001 | t0009 | g0151 | SAS | PJL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03492 | hp1 | a0001 | c0001 | t0009 | g0171 | SAS | PJL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03516 | hp1 | a0001 | c0001 | t0001 | g0024 | AFR | ESN | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03516 | hp2 | a0001 | c0001 | t0001 | g0136 | AFR | ESN | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03540 | hp1 | a0001 | c0001 | t0001 | g0116 | AFR | GWD | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03540 | hp2 | a0001 | c0001 | t0004 | g0098 | AFR | GWD | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03579 | hp1 | a0001 | c0001 | t0007 | g0010 | AFR | MSL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03654 | hp1 | a0001 | c0001 | t0002 | g0161 | SAS | PJL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03688 | hp1 | a0001 | c0001 | t0016 | g0066 | SAS | STU | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03704 | hp1 | a0001 | c0001 | t0002 | g0146 | SAS | PJL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03704 | hp2 | a0001 | c0001 | t0001 | g0037 | SAS | PJL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03710 | hp1 | a0001 | c0001 | t0001 | g0018 | SAS | PJL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03831 | hp1 | a0001 | c0001 | t0002 | g0199 | SAS | BEB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03831 | hp2 | a0001 | c0001 | t0001 | g0086 | SAS | BEB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03942 | hp1 | a0001 | c0001 | t0001 | g0062 | SAS | BEB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG04115 | hp1 | a0001 | c0001 | t0002 | g0166 | SAS | STU | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG04199 | hp1 | a0001 | c0001 | t0001 | g0059 | SAS | STU | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG04204 | hp1 | a0001 | c0001 | t0001 | g0084 | SAS | STU | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG04228 | hp1 | a0001 | c0001 | t0001 | g0133 | SAS | STU | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18522 | hp1 | a0001 | c0001 | t0001 | g0015 | AFR | YRI | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18612 | hp1 | a0001 | c0001 | t0001 | g0075 | EAS | CHB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18747 | hp1 | a0001 | c0001 | t0019 | g0148 | EAS | CHB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18940 | hp1 | a0001 | c0001 | t0002 | g0164 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18942 | hp1 | a0001 | c0001 | t0002 | g0149 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18942 | hp2 | a0001 | c0001 | t0001 | g0034 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18943 | hp1 | a0001 | c0001 | t0001 | g0071 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18944 | hp1 | a0001 | c0001 | t0001 | g0036 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18945 | hp1 | a0001 | c0001 | t0001 | g0082 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18948 | hp1 | a0001 | c0001 | t0001 | g0054 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18951 | hp1 | a0001 | c0001 | t0001 | g0021 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18951 | hp2 | a0001 | c0001 | t0002 | g0159 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18952 | hp1 | a0001 | c0001 | t0002 | g0169 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18953 | hp1 | a0001 | c0001 | t0001 | g0025 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18959 | hp1 | a0001 | c0001 | t0002 | g0155 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18960 | hp1 | a0001 | c0001 | t0002 | g0179 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18961 | hp1 | a0001 | c0001 | t0001 | g0064 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18962 | hp1 | a0001 | c0001 | t0001 | g0048 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18965 | hp1 | a0001 | c0001 | t0001 | g0017 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18966 | hp1 | a0001 | c0001 | t0001 | g0051 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18967 | hp1 | a0001 | c0001 | t0001 | g0079 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18970 | hp1 | a0001 | c0001 | t0001 | g0043 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18971 | hp1 | a0001 | c0001 | t0001 | g0077 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18974 | hp1 | a0001 | c0001 | t0001 | g0046 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18977 | hp1 | a0001 | c0001 | t0002 | g0158 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18982 | hp1 | a0001 | c0001 | t0001 | g0053 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18983 | hp1 | a0001 | c0001 | t0002 | g0006 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18984 | hp1 | a0001 | c0001 | t0001 | g0027 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18985 | hp1 | a0001 | c0001 | t0002 | g0194 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18986 | hp1 | a0001 | c0001 | t0002 | g0167 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18988 | hp1 | a0001 | c0001 | t0001 | g0030 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18989 | hp1 | a0001 | c0001 | t0001 | g0093 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18990 | hp1 | a0001 | c0001 | t0001 | g0028 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18994 | hp1 | a0001 | c0001 | t0001 | g0057 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18995 | hp1 | a0001 | c0001 | t0001 | g0089 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19000 | hp1 | a0001 | c0001 | t0001 | g0081 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19004 | hp1 | a0001 | c0001 | t0001 | g0067 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19005 | hp1 | a0001 | c0001 | t0001 | g0029 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19006 | hp1 | a0001 | c0001 | t0002 | g0165 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19007 | hp1 | a0001 | c0001 | t0002 | g0188 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19009 | hp1 | a0001 | c0001 | t0002 | g0193 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19011 | hp1 | a0001 | c0001 | t0001 | g0076 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19011 | hp2 | a0001 | c0001 | t0001 | g0040 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19012 | hp1 | a0001 | c0001 | t0001 | g0083 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19030 | hp1 | a0001 | c0001 | t0001 | g0026 | AFR | LWK | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19030 | hp2 | a0001 | c0001 | t0001 | g0105 | AFR | LWK | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19043 | hp1 | a0001 | c0001 | t0001 | g0138 | AFR | LWK | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19056 | hp1 | a0001 | c0001 | t0001 | g0039 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19058 | hp1 | a0001 | c0001 | t0001 | g0035 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19060 | hp1 | a0001 | c0001 | t0002 | g0183 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19062 | hp1 | a0001 | c0001 | t0001 | g0085 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19063 | hp1 | a0001 | c0001 | t0002 | g0144 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19066 | hp1 | a0001 | c0001 | t0002 | g0187 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19067 | hp1 | a0001 | c0001 | t0001 | g0090 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19068 | hp1 | a0001 | c0001 | t0002 | g0178 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19070 | hp1 | a0001 | c0001 | t0001 | g0065 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19075 | hp1 | a0001 | c0001 | t0001 | g0143 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19079 | hp1 | a0001 | c0001 | t0001 | g0078 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19082 | hp1 | a0001 | c0001 | t0002 | g0207 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19083 | hp1 | a0001 | c0001 | t0002 | g0197 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19085 | hp1 | a0001 | c0001 | t0002 | g0147 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19086 | hp1 | a0001 | c0001 | t0001 | g0019 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19088 | hp1 | a0001 | c0001 | t0001 | g0045 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19089 | hp1 | a0001 | c0001 | t0002 | g0186 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA19091 | hp1 | a0001 | c0001 | t0001 | g0016 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA20129 | hp1 | a0001 | c0001 | t0002 | g0157 | AFR | ASW | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA20129 | hp2 | a0001 | c0001 | t0001 | g0137 | AFR | ASW | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA20752 | hp1 | a0001 | c0001 | t0002 | g0154 | EUR | TSI | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA20805 | hp1 | a0001 | c0001 | t0001 | g0142 | EUR | TSI | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA20905 | hp1 | a0001 | c0001 | t0001 | g0031 | SAS | GIH | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02109 | hp1 | a0001 | c0001 | t0001 | g0104 | AFR | ACB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02109 | hp2 | a0001 | c0001 | t0001 | g0123 | AFR | ACB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02486 | hp1 | a0001 | c0002 | t0008 | g0097 | AFR | ACB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02559 | hp1 | a0001 | c0001 | t0007 | g0011 | AFR | ACB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG02559 | hp2 | a0001 | c0001 | t0001 | g0106 | AFR | ACB | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| HG03471 | hp1 | a0001 | c0001 | t0001 | g0111 | AFR | MSL | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA18955 | hp1 | a0001 | c0001 | t0002 | g0206 | EAS | JPT | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA20300 | hp1 | a0001 | c0001 | t0001 | g0128 | AFR | USA | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA20300 | hp2 | a0001 | c0001 | t0002 | g0177 | AFR | USA | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA21309 | hp1 | a0001 | c0001 | t0002 | g0145 | AFR | LWK | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| NA21309 | hp2 | a0001 | c0001 | t0001 | g0107 | AFR | LWK | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| homoSapiens | chm13v2 | a0001 | c0001 | t0012 | g0088 | REF | REF | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| homoSapiens | grch38p0 | a0001 | c0001 | t0001 | g0013 | REF | REF | SMC1A_chrX_53369149_53427654 | SMC1A | chrX | 53369149 | 53427654 |
| view | chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:53383145 | T | C | 1 | a0002 | 1 | HG01175.hp1 | missense_variant | MODERATE | c.3082A>G | p.Met1028Val | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 20/25 | 3136/9710 | 3082/3702 | 1028/1233 | chrX | 53383145 |
| view | chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:53380151 | G | A | 1 | a0001c0005 | 1 | HG00544.hp2 | synonymous_variant | LOW | c.3654C>T | p.Phe1218Phe | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 3708/9710 | 3654/3702 | 1218/1233 | chrX | 53380151 | |||
| chrX:53405804 | C | T | 1 | a0001c0002 | 2 | HG02486.hp1 HG02922.hp1 |
synonymous_variant | LOW | c.1698G>A | p.Glu566Glu | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 10/25 | 1752/9710 | 1698/3702 | 566/1233 | chrX | 53405804 | |||
| chrX:53411842 | C | T | 1 | a0001c0004 | 1 | HG00609.hp1 | synonymous_variant | LOW | c.1173G>A | p.Gln391Gln | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/25 | 1227/9710 | 1173/3702 | 391/1233 | chrX | 53411842 | |||
| chrX:53413055 | C | T | 1 | a0001c0003 | 1 | HG02280.hp1 | synonymous_variant | LOW | c.699G>A | p.Val233Val | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 5/25 | 753/9710 | 699/3702 | 233/1233 | chrX | 53413055 |
| view | chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:53374622 | C | T | 1 | a0001c0001t0004 | 6 | HG00735.hp1 HG01891.hp1 HG01934.hp1 others(3): Show |
3_prime_UTR_variant | MODIFIER | c.*5481G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 5481 | chrX | 53374622 | ||||||
| chrX:53374723 | C | T | 1 | a0001c0001t0009 | 2 | HG03491.hp2 HG03492.hp1 |
3_prime_UTR_variant | MODIFIER | c.*5380G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 5380 | chrX | 53374723 | ||||||
| chrX:53375062 | T | A | 1 | a0001c0001t0010 | 2 | HG00642.hp1 HG01175.hp2 |
3_prime_UTR_variant | MODIFIER | c.*5041A>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 5041 | chrX | 53375062 | ||||||
| chrX:53375087 | A | G | 1 | a0001c0001t0003 | 6 | HG01255.hp1 HG02257.hp1 HG02922.hp2 others(3): Show |
3_prime_UTR_variant | MODIFIER | c.*5016T>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 5016 | chrX | 53375087 | ||||||
| chrX:53375145 | G | A | 1 | a0001c0001t0013 | 1 | HG00597.hp2 | 3_prime_UTR_variant | MODIFIER | c.*4958C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 4958 | chrX | 53375145 | ||||||
| chrX:53375216 | A | G | 1 | a0001c0001t0007 | 2 | HG02559.hp1 HG03579.hp1 |
3_prime_UTR_variant | MODIFIER | c.*4887T>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 4887 | chrX | 53375216 | ||||||
| chrX:53375307 | C | T | 1 | a0001c0001t0005 | 3 | HG02145.hp1 HG02809.hp1 HG03041.hp2 |
3_prime_UTR_variant | MODIFIER | c.*4796G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 4796 | chrX | 53375307 | ||||||
| chrX:53376170 | C | T | 1 | a0001c0001t0005 | 3 | HG02145.hp1 HG02809.hp1 HG03041.hp2 |
3_prime_UTR_variant | MODIFIER | c.*3933G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 3933 | chrX | 53376170 | ||||||
| chrX:53376387 | G | A | 1 | a0001c0001t0018 | 1 | HG02738.hp1 | 3_prime_UTR_variant | MODIFIER | c.*3716C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 3716 | chrX | 53376387 | ||||||
| chrX:53376395 | G | C | 1 | a0001c0001t0019 | 1 | NA18747.hp1 | 3_prime_UTR_variant | MODIFIER | c.*3708C>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 3708 | chrX | 53376395 | ||||||
| chrX:53377101 | C | T | 1 | a0001c0003t0011 | 1 | HG02280.hp1 | 3_prime_UTR_variant | MODIFIER | c.*3002G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 3002 | chrX | 53377101 | ||||||
| chrX:53377247 | T | A | 1 | a0001c0001t0016 | 1 | HG03688.hp1 | 3_prime_UTR_variant | MODIFIER | c.*2856A>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 2856 | chrX | 53377247 | ||||||
| chrX:53377514 | T | C | 1 | a0001c0001t0014 | 1 | HG02080.hp2 | 3_prime_UTR_variant | MODIFIER | c.*2589A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 2589 | chrX | 53377514 | ||||||
| chrX:53377563 | G | C | 1 | a0001c0001t0014 | 1 | HG02080.hp2 | 3_prime_UTR_variant | MODIFIER | c.*2540C>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 2540 | chrX | 53377563 | ||||||
| chrX:53377585 | C | T | 1 | a0001c0003t0011 | 1 | HG02280.hp1 | 3_prime_UTR_variant | MODIFIER | c.*2518G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 2518 | chrX | 53377585 | ||||||
| chrX:53377714 | C | A | 1 | a0001c0002t0008 | 2 | HG02486.hp1 HG02922.hp1 |
3_prime_UTR_variant | MODIFIER | c.*2389G>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 2389 | chrX | 53377714 | ||||||
| chrX:53378357 | G | A | 1 | a0001c0001t0015 | 1 | HG02895.hp1 | 3_prime_UTR_variant | MODIFIER | c.*1746C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 1746 | chrX | 53378357 | ||||||
| chrX:53378561 | A | G | 1 | a0001c0001t0007 | 2 | HG02559.hp1 HG03579.hp1 |
3_prime_UTR_variant | MODIFIER | c.*1542T>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 1542 | chrX | 53378561 | ||||||
| chrX:53379788 | C | A | 1 | a0001c0001t0006 | 3 | HG01243.hp1 HG02615.hp2 HG03486.hp1 |
3_prime_UTR_variant | MODIFIER | c.*315G>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 315 | chrX | 53379788 | ||||||
| chrX:53380007 | G | A | 1 | a0001c0001t0016 | 1 | HG03688.hp1 | 3_prime_UTR_variant | MODIFIER | c.*96C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 96 | chrX | 53380007 | ||||||
| chrX:53380050 | T | C | 1 | a0001c0001t0017 | 1 | HG02258.hp1 | 3_prime_UTR_variant | MODIFIER | c.*53A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 25/25 | 53 | chrX | 53380050 | ||||||
| chrX:53422619 | G | A | 7 | a0001c0001t0002 a0001c0001t0009 a0001c0001t0010 others(4): Show |
72 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(69): Show |
5_prime_UTR_premature_start_codon_gain_variant | LOW | c.-19C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/25 | chrX | 53422619 |
| view | chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chrX:53380974 | G | A | 1 | a0001c0001t0001g0019 | 1 | NA19086.hp1 | intron_variant | MODIFIER | c.3507+44C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 23/24 | chrX | 53380974 | |||||||
| chrX:53381496 | T | C | 1 | a0001c0001t0001g0091 | 1 | HG01346.hp2 | intron_variant | MODIFIER | c.3438-409A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 22/24 | chrX | 53381496 | |||||||
| chrX:53381690 | T | C | 1 | a0001c0001t0001g0012 | 1 | HG01884.hp2 | intron_variant | MODIFIER | c.3437+542A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 22/24 | chrX | 53381690 | |||||||
| chrX:53381934 | C | T | 2 | a0001c0001t0001g0061 a0001c0001t0001g0070 |
2 | HG02647.hp1 HG03453.hp1 |
intron_variant | MODIFIER | c.3437+298G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 22/24 | chrX | 53381934 | |||||||
| chrX:53381976 | C | T | 7 | a0001c0001t0001g0026 a0001c0001t0005g0007 a0001c0001t0005g0008 others(4): Show |
7 | HG02145.hp1 HG02280.hp1 HG02559.hp1 others(4): Show |
intron_variant | MODIFIER | c.3437+256G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 22/24 | chrX | 53381976 | |||||||
| chrX:53382914 | C | T | 34 | a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0102 others(31): Show |
35 | HG00735.hp1 HG01167.hp1 HG01169.hp2 others(32): Show |
intron_variant | MODIFIER | c.3130+183G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 20/24 | chrX | 53382914 | |||||||
| chrX:53383511 | C | T | 1 | a0001c0001t0001g0062 | 1 | HG03942.hp1 | intron_variant | MODIFIER | c.2974-258G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53383511 | |||||||
| chrX:53383512 | G | A | 2 | a0001c0001t0003g0114 a0001c0001t0003g0125 |
2 | HG02922.hp2 HG03130.hp1 |
intron_variant | MODIFIER | c.2974-259C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53383512 | |||||||
| chrX:53383725 | A | C | 1 | a0001c0001t0001g0058 | 1 | HG00735.hp2 | intron_variant | MODIFIER | c.2974-472T>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53383725 | |||||||
| chrX:53383877 | G | A | 1 | a0001c0001t0002g0146 | 1 | HG03704.hp1 | intron_variant | MODIFIER | c.2974-624C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53383877 | |||||||
| chrX:53384051 | A | G | 204 | a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0015 others(201): Show |
210 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(207): Show |
intron_variant | MODIFIER | c.2974-798T>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53384051 | |||||||
| chrX:53384198 | T | C | 1 | a0001c0001t0001g0024 | 1 | HG03516.hp1 | intron_variant | MODIFIER | c.2974-945A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53384198 | |||||||
| chrX:53384200 | T | C | 1 | a0001c0001t0001g0026 | 1 | NA19030.hp1 | intron_variant | MODIFIER | c.2974-947A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53384200 | |||||||
| chrX:53384264 | C | CT | 9 | a0001c0001t0001g0015 a0001c0001t0001g0020 a0001c0001t0001g0022 others(6): Show |
9 | HG00738.hp1 HG02300.hp1 HG03098.hp1 others(6): Show |
intron_variant | MODIFIER | c.2974-1012dupA | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53384264 | |||||||
| chrX:53384806 | G | A | 3 | a0001c0001t0001g0140 a0001c0001t0009g0151 a0001c0001t0009g0171 |
3 | HG00323.hp1 HG03491.hp2 HG03492.hp1 |
intron_variant | MODIFIER | c.2974-1553C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53384806 | |||||||
| chrX:53384992 | A | T | 1 | a0001c0001t0002g0202 | 1 | HG01261.hp1 | intron_variant | MODIFIER | c.2974-1739T>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53384992 | |||||||
| chrX:53384994 | T | A | 19 | a0001c0001t0001g0014 a0001c0001t0001g0025 a0001c0001t0001g0040 others(16): Show |
19 | HG00597.hp2 HG00673.hp1 HG02056.hp1 others(16): Show |
intron_variant | MODIFIER | c.2974-1741A>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53384994 | |||||||
| chrX:53385256 | GT | G | 68 | a0001c0001t0001g0021 a0001c0001t0001g0025 a0001c0001t0001g0048 others(65): Show |
72 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(69): Show |
intron_variant | MODIFIER | c.2974-2004delA | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53385256 | |||||||
| chrX:53385274 | T | A | 1 | a0001c0001t0002g0178 | 1 | NA19068.hp1 | intron_variant | MODIFIER | c.2974-2021A>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53385274 | |||||||
| chrX:53385276 | A | G | 1 | a0001c0001t0002g0178 | 1 | NA19068.hp1 | intron_variant | MODIFIER | c.2974-2023T>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53385276 | |||||||
| chrX:53385277 | G | T | 1 | a0001c0001t0002g0178 | 1 | NA19068.hp1 | intron_variant | MODIFIER | c.2974-2024C>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53385277 | |||||||
| chrX:53385288 | T | G | 1 | a0001c0001t0001g0025 | 1 | NA18953.hp1 | intron_variant | MODIFIER | c.2974-2035A>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53385288 | |||||||
| chrX:53385289 | G | A | 1 | a0001c0001t0001g0025 | 1 | NA18953.hp1 | intron_variant | MODIFIER | c.2974-2036C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53385289 | |||||||
| chrX:53385290 | A | G | 1 | a0001c0001t0001g0025 | 1 | NA18953.hp1 | intron_variant | MODIFIER | c.2974-2037T>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53385290 | |||||||
| chrX:53385332 | G | A | 2 | a0001c0001t0001g0047 a0001c0001t0001g0092 |
2 | HG01106.hp1 HG02615.hp1 |
intron_variant | MODIFIER | c.2974-2079C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53385332 | |||||||
| chrX:53385333 | C | T | 10 | a0001c0001t0001g0113 a0001c0001t0001g0119 a0001c0001t0001g0123 others(7): Show |
10 | HG01167.hp1 HG01169.hp2 HG01255.hp1 others(7): Show |
intron_variant | MODIFIER | c.2974-2080G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53385333 | |||||||
| chrX:53385356 | C | T | 1 | a0001c0001t0001g0032 | 1 | HG02622.hp2 | intron_variant | MODIFIER | c.2974-2103G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53385356 | |||||||
| chrX:53385431 | C | T | 2 | a0001c0001t0004g0002 a0001c0001t0004g0098 |
3 | HG01934.hp1 HG03209.hp1 HG03540.hp2 |
intron_variant | MODIFIER | c.2974-2178G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53385431 | |||||||
| chrX:53385566 | C | T | 1 | a0001c0001t0001g0014 | 1 | HG03139.hp1 | intron_variant | MODIFIER | c.2974-2313G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53385566 | |||||||
| chrX:53386135 | G | C | 1 | a0001c0003t0011g0141 | 1 | HG02280.hp1 | intron_variant | MODIFIER | c.2974-2882C>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53386135 | |||||||
| chrX:53386212 | A | G | 1 | a0001c0001t0001g0085 | 1 | NA19062.hp1 | intron_variant | MODIFIER | c.2974-2959T>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53386212 | |||||||
| chrX:53386388 | A | C | 2 | a0001c0001t0004g0002 a0001c0001t0004g0098 |
3 | HG01934.hp1 HG03209.hp1 HG03540.hp2 |
intron_variant | MODIFIER | c.2974-3135T>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53386388 | |||||||
| chrX:53386674 | G | A | 1 | a0001c0001t0002g0182 | 1 | HG02135.hp1 | intron_variant | MODIFIER | c.2974-3421C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53386674 | |||||||
| chrX:53386787 | T | A | 1 | a0001c0003t0011g0141 | 1 | HG02280.hp1 | intron_variant | MODIFIER | c.2974-3534A>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53386787 | |||||||
| chrX:53386989 | G | A | 1 | a0001c0001t0001g0012 | 1 | HG01884.hp2 | intron_variant | MODIFIER | c.2974-3736C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53386989 | |||||||
| chrX:53387130 | G | A | 3 | a0001c0001t0007g0010 a0001c0001t0007g0011 a0001c0003t0011g0141 |
3 | HG02280.hp1 HG02559.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.2974-3877C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53387130 | |||||||
| chrX:53387383 | G | C | 5 | a0001c0001t0001g0065 a0001c0001t0001g0067 a0001c0001t0001g0071 others(2): Show |
5 | HG00597.hp2 NA18943.hp1 NA18995.hp1 others(2): Show |
intron_variant | MODIFIER | c.2974-4130C>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53387383 | |||||||
| chrX:53387681 | G | A | 1 | a0001c0001t0001g0026 | 1 | NA19030.hp1 | intron_variant | MODIFIER | c.2974-4428C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53387681 | |||||||
| chrX:53387987 | CAGAATAA others(7): Show |
C | 1 | a0001c0001t0002g0155 | 1 | NA18959.hp1 | intron_variant | MODIFIER | c.2974-4748_2974-473 others(18): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53387987 | |||||||
| chrX:53388122 | T | C | 7 | a0001c0001t0001g0001 a0001c0001t0001g0042 a0001c0001t0001g0052 others(4): Show |
8 | HG00741.hp2 HG01069.hp1 HG01071.hp2 others(5): Show |
intron_variant | MODIFIER | c.2974-4869A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53388122 | |||||||
| chrX:53388298 | C | T | 1 | a0001c0001t0001g0012 | 1 | HG01884.hp2 | intron_variant | MODIFIER | c.2974-5045G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53388298 | |||||||
| chrX:53388320 | T | C | 1 | a0001c0001t0001g0094 | 1 | HG02886.hp2 | intron_variant | MODIFIER | c.2974-5067A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53388320 | |||||||
| chrX:53388521 | C | T | 1 | a0001c0003t0011g0141 | 1 | HG02280.hp1 | intron_variant | MODIFIER | c.2974-5268G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53388521 | |||||||
| chrX:53388760 | G | A | 1 | a0001c0001t0001g0127 | 1 | HG02809.hp2 | intron_variant | MODIFIER | c.2974-5507C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53388760 | |||||||
| chrX:53388877 | G | T | 2 | a0001c0001t0007g0010 a0001c0001t0007g0011 |
2 | HG02559.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.2974-5624C>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53388877 | |||||||
| chrX:53388936 | G | T | 2 | a0001c0001t0001g0015 a0001c0001t0001g0023 |
2 | HG00738.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.2974-5683C>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53388936 | |||||||
| chrX:53388937 | C | T | 2 | a0001c0001t0001g0015 a0001c0001t0001g0023 |
2 | HG00738.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.2974-5684G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53388937 | |||||||
| chrX:53388984 | A | G | 1 | a0001c0001t0001g0063 | 1 | HG02056.hp1 | intron_variant | MODIFIER | c.2974-5731T>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53388984 | |||||||
| chrX:53388996 | C | CA | 20 | a0001c0001t0001g0017 a0001c0001t0001g0024 a0001c0001t0001g0049 others(17): Show |
20 | HG01175.hp1 HG01175.hp2 HG01243.hp1 others(17): Show |
intron_variant | MODIFIER | c.2974-5744dupT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53388996 | |||||||
| chrX:53388996 | CA | C | 7 | a0001c0001t0001g0025 a0001c0001t0001g0033 a0001c0001t0001g0052 others(4): Show |
7 | HG01069.hp1 HG02040.hp1 HG02145.hp1 others(4): Show |
intron_variant | MODIFIER | c.2974-5744delT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53388996 | |||||||
| chrX:53389101 | T | C | 4 | a0001c0001t0001g0094 a0001c0001t0001g0108 a0001c0001t0001g0110 others(1): Show |
4 | HG02622.hp1 HG02886.hp2 HG02895.hp1 others(1): Show |
intron_variant | MODIFIER | c.2973+5677A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53389101 | |||||||
| chrX:53389117 | G | GT | 7 | a0001c0001t0001g0032 a0001c0001t0001g0081 a0001c0001t0001g0103 others(4): Show |
7 | HG00544.hp1 HG02572.hp1 HG02622.hp2 others(4): Show |
intron_variant | MODIFIER | c.2973+5660dupA | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53389117 | |||||||
| chrX:53389620 | C | T | 1 | a0001c0001t0002g0194 | 1 | NA18985.hp1 | intron_variant | MODIFIER | c.2973+5158G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53389620 | |||||||
| chrX:53389775 | A | C | 1 | a0001c0001t0001g0094 | 1 | HG02886.hp2 | intron_variant | MODIFIER | c.2973+5003T>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53389775 | |||||||
| chrX:53389842 | C | CT | 28 | a0001c0001t0001g0020 a0001c0001t0001g0023 a0001c0001t0001g0024 others(25): Show |
28 | HG00738.hp1 HG01109.hp1 HG01346.hp2 others(25): Show |
intron_variant | MODIFIER | c.2973+4935dupA | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53389842 | |||||||
| chrX:53389842 | CT | C | 11 | a0001c0001t0001g0034 a0001c0001t0001g0046 a0001c0001t0001g0049 others(8): Show |
12 | HG00099.hp1 HG00735.hp1 HG01934.hp1 others(9): Show |
intron_variant | MODIFIER | c.2973+4935delA | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53389842 | |||||||
| chrX:53389842 | CTTTTTTT others(6): Show |
C | 1 | a0001c0001t0002g0206 | 1 | NA18955.hp1 | intron_variant | MODIFIER | c.2973+4923_2973+493 others(17): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53389842 | |||||||
| chrX:53389846 | T | C | 6 | a0001c0001t0003g0100 a0001c0001t0003g0114 a0001c0001t0003g0122 others(3): Show |
6 | HG01255.hp1 HG02257.hp1 HG02922.hp2 others(3): Show |
intron_variant | MODIFIER | c.2973+4932A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53389846 | |||||||
| chrX:53390067 | A | G | 3 | a0001c0001t0007g0010 a0001c0001t0007g0011 a0001c0003t0011g0141 |
3 | HG02280.hp1 HG02559.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.2973+4711T>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53390067 | |||||||
| chrX:53390200 | C | T | 1 | a0001c0001t0001g0035 | 1 | NA19058.hp1 | intron_variant | MODIFIER | c.2973+4578G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53390200 | |||||||
| chrX:53390204 | G | T | 1 | a0001c0001t0002g0160 | 1 | HG01346.hp1 | intron_variant | MODIFIER | c.2973+4574C>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53390204 | |||||||
| chrX:53390262 | C | A | 67 | a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0005 others(64): Show |
71 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(68): Show |
intron_variant | MODIFIER | c.2973+4516G>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53390262 | |||||||
| chrX:53390340 | T | C | 2 | a0001c0001t0001g0020 a0001c0001t0001g0024 |
2 | HG03098.hp1 HG03516.hp1 |
intron_variant | MODIFIER | c.2973+4438A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53390340 | |||||||
| chrX:53390742 | C | T | 3 | a0001c0001t0001g0113 a0001c0001t0001g0119 a0001c0001t0001g0123 |
3 | HG01167.hp1 HG01169.hp2 HG02109.hp2 |
intron_variant | MODIFIER | c.2973+4036G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53390742 | |||||||
| chrX:53390973 | CA | C | 157 | a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0015 others(154): Show |
162 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(159): Show |
intron_variant | MODIFIER | c.2973+3804delT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53390973 | |||||||
| chrX:53390973 | CAA | C | 5 | a0001c0001t0001g0016 a0001c0001t0001g0026 a0001c0001t0001g0064 others(2): Show |
5 | HG01169.hp2 HG04115.hp1 NA18961.hp1 others(2): Show |
intron_variant | MODIFIER | c.2973+3803_2973+380 others(6): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53390973 | |||||||
| chrX:53391004 | GA | G | 7 | a0001c0001t0001g0016 a0001c0001t0001g0075 a0001c0001t0001g0086 others(4): Show |
7 | HG01169.hp2 HG02965.hp1 HG03831.hp2 others(4): Show |
intron_variant | MODIFIER | c.2973+3773delT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53391004 | |||||||
| chrX:53391103 | C | T | 1 | a0001c0001t0001g0014 | 1 | HG03139.hp1 | intron_variant | MODIFIER | c.2973+3675G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53391103 | |||||||
| chrX:53391458 | TA | T | 10 | a0001c0001t0001g0025 a0001c0001t0001g0027 a0001c0001t0001g0034 others(7): Show |
10 | HG02559.hp2 NA18942.hp2 NA18953.hp1 others(7): Show |
intron_variant | MODIFIER | c.2973+3319delT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53391458 | |||||||
| chrX:53391711 | T | C | 6 | a0001c0001t0001g0040 a0001c0001t0001g0043 a0001c0001t0001g0063 others(3): Show |
6 | HG00673.hp1 HG02056.hp1 NA18970.hp1 others(3): Show |
intron_variant | MODIFIER | c.2973+3067A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53391711 | |||||||
| chrX:53391865 | G | GATTGTCC others(5): Show |
1 | a0001c0001t0002g0155 | 1 | NA18959.hp1 | intron_variant | MODIFIER | c.2973+2901_2973+291 others(16): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53391865 | |||||||
| chrX:53392066 | T | A | 1 | a0001c0001t0001g0043 | 1 | NA18970.hp1 | intron_variant | MODIFIER | c.2973+2712A>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53392066 | |||||||
| chrX:53392389 | C | CA | 7 | a0001c0001t0001g0127 a0001c0001t0001g0143 a0001c0001t0002g0178 others(4): Show |
7 | HG02083.hp1 HG02145.hp1 HG02809.hp1 others(4): Show |
intron_variant | MODIFIER | c.2973+2388dupT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53392389 | |||||||
| chrX:53392393 | A | C | 1 | a0001c0001t0001g0039 | 1 | NA19056.hp1 | intron_variant | MODIFIER | c.2973+2385T>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53392393 | |||||||
| chrX:53392608 | C | T | 2 | a0001c0001t0002g0179 a0001c0001t0002g0188 |
2 | NA18960.hp1 NA19007.hp1 |
intron_variant | MODIFIER | c.2973+2170G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53392608 | |||||||
| chrX:53392727 | C | T | 1 | a0001c0001t0002g0197 | 1 | NA19083.hp1 | intron_variant | MODIFIER | c.2973+2051G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53392727 | |||||||
| chrX:53393358 | T | C | 1 | a0001c0001t0001g0023 | 1 | HG00738.hp1 | intron_variant | MODIFIER | c.2973+1420A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53393358 | |||||||
| chrX:53393590 | T | C | 64 | a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0005 others(61): Show |
68 | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(65): Show |
intron_variant | MODIFIER | c.2973+1188A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53393590 | |||||||
| chrX:53393931 | C | T | 2 | a0001c0001t0007g0010 a0001c0001t0007g0011 |
2 | HG02559.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.2973+847G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53393931 | |||||||
| chrX:53394147 | C | T | 3 | a0001c0001t0007g0010 a0001c0001t0007g0011 a0001c0003t0011g0141 |
3 | HG02280.hp1 HG02559.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.2973+631G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53394147 | |||||||
| chrX:53394152 | CA | C | 116 | a0001c0001t0001g0001 a0001c0001t0001g0012 a0001c0001t0001g0014 others(113): Show |
117 | HG00323.hp1 HG00438.hp1 HG00544.hp2 others(114): Show |
intron_variant | MODIFIER | c.2973+625delT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53394152 | |||||||
| chrX:53394152 | CAA | C | 9 | a0001c0001t0001g0020 a0001c0001t0001g0024 a0001c0001t0001g0025 others(6): Show |
9 | HG01069.hp1 HG02280.hp1 HG02735.hp1 others(6): Show |
intron_variant | MODIFIER | c.2973+624_2973+625d others(4): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53394152 | |||||||
| chrX:53394533 | T | C | 1 | a0001c0001t0001g0022 | 1 | HG03491.hp1 | intron_variant | MODIFIER | c.2973+245A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53394533 | |||||||
| chrX:53394653 | CCT | C | 5 | a0001c0001t0001g0061 a0001c0001t0001g0070 a0001c0001t0002g0004 others(2): Show |
6 | HG00323.hp2 HG00741.hp1 HG01099.hp1 others(3): Show |
intron_variant | MODIFIER | c.2973+123_2973+124d others(4): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53394653 | |||||||
| chrX:53394717 | G | A | 4 | a0001c0001t0001g0094 a0001c0001t0001g0108 a0001c0001t0001g0110 others(1): Show |
4 | HG02622.hp1 HG02886.hp2 HG02895.hp1 others(1): Show |
intron_variant | MODIFIER | c.2973+61C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53394717 | |||||||
| chrX:53394733 | C | T | 2 | a0001c0001t0002g0184 a0001c0001t0002g0185 |
2 | HG00099.hp1 HG01515.hp1 |
intron_variant | MODIFIER | c.2973+45G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 19/24 | chrX | 53394733 | |||||||
| chrX:53395275 | G | A | 1 | a0001c0001t0004g0098 | 1 | HG03540.hp2 | intron_variant | MODIFIER | c.2863-387C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 18/24 | chrX | 53395275 | |||||||
| chrX:53395552 | C | A | 3 | a0001c0001t0007g0010 a0001c0001t0007g0011 a0001c0003t0011g0141 |
3 | HG02280.hp1 HG02559.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.2863-664G>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 18/24 | chrX | 53395552 | |||||||
| chrX:53395598 | T | C | 6 | a0001c0001t0001g0040 a0001c0001t0001g0043 a0001c0001t0001g0063 others(3): Show |
6 | HG00673.hp1 HG02056.hp1 NA18970.hp1 others(3): Show |
intron_variant | MODIFIER | c.2862+629A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 18/24 | chrX | 53395598 | |||||||
| chrX:53395600 | C | G | 1 | a0001c0001t0001g0022 | 1 | HG03491.hp1 | intron_variant | MODIFIER | c.2862+627G>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 18/24 | chrX | 53395600 | |||||||
| chrX:53397061 | G | GT | 6 | a0001c0001t0001g0131 a0001c0001t0001g0136 a0001c0001t0001g0137 others(3): Show |
6 | HG01884.hp1 HG02055.hp1 HG03516.hp2 others(3): Show |
intron_variant | MODIFIER | c.2563-445dupA | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 16/24 | chrX | 53397061 | |||||||
| chrX:53397063 | TG | T | 4 | a0001c0001t0001g0025 a0001c0001t0001g0055 a0001c0001t0001g0065 others(1): Show |
4 | HG01433.hp1 HG03453.hp2 NA18953.hp1 others(1): Show |
intron_variant | MODIFIER | c.2563-447delC | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 16/24 | chrX | 53397063 | |||||||
| chrX:53397064 | G | T | 200 | a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0015 others(197): Show |
206 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(203): Show |
intron_variant | MODIFIER | c.2563-447C>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 16/24 | chrX | 53397064 | |||||||
| chrX:53397075 | A | T | 1 | a0001c0001t0004g0115 | 1 | HG00735.hp1 | intron_variant | MODIFIER | c.2563-458T>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 16/24 | chrX | 53397075 | |||||||
| chrX:53397190 | C | T | 3 | a0001c0001t0005g0007 a0001c0001t0005g0008 a0001c0001t0005g0009 |
3 | HG02145.hp1 HG02809.hp1 HG03041.hp2 |
intron_variant | MODIFIER | c.2563-573G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 16/24 | chrX | 53397190 | |||||||
| chrX:53397306 | T | C | 1 | a0001c0001t0001g0110 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.2563-689A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 16/24 | chrX | 53397306 | |||||||
| chrX:53397455 | C | T | 3 | a0001c0001t0005g0007 a0001c0001t0005g0008 a0001c0001t0005g0009 |
3 | HG02145.hp1 HG02809.hp1 HG03041.hp2 |
intron_variant | MODIFIER | c.2563-838G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 16/24 | chrX | 53397455 | |||||||
| chrX:53397505 | T | C | 1 | a0001c0001t0001g0131 | 1 | HG01884.hp1 | intron_variant | MODIFIER | c.2563-888A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 16/24 | chrX | 53397505 | |||||||
| chrX:53397506 | G | T | 1 | a0001c0001t0001g0131 | 1 | HG01884.hp1 | intron_variant | MODIFIER | c.2563-889C>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 16/24 | chrX | 53397506 | |||||||
| chrX:53397580 | CA | C | 129 | a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0015 others(126): Show |
131 | HG00323.hp1 HG00438.hp1 HG00544.hp2 others(128): Show |
intron_variant | MODIFIER | c.2563-964delT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 16/24 | chrX | 53397580 | |||||||
| chrX:53398003 | T | C | 1 | a0001c0001t0001g0012 | 1 | HG01884.hp2 | intron_variant | MODIFIER | c.2563-1386A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 16/24 | chrX | 53398003 | |||||||
| chrX:53398183 | C | CA | 8 | a0001c0001t0001g0073 a0001c0001t0001g0111 a0001c0001t0001g0133 others(5): Show |
8 | HG01256.hp1 HG02074.hp1 HG02300.hp1 others(5): Show |
intron_variant | MODIFIER | c.2562+1405dupT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 16/24 | chrX | 53398183 | |||||||
| chrX:53398183 | C | CAA | 61 | a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0005 others(58): Show |
65 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(62): Show |
intron_variant | MODIFIER | c.2562+1404_2562+140 others(6): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 16/24 | chrX | 53398183 | |||||||
| chrX:53398183 | CA | C | 5 | a0001c0001t0001g0015 a0001c0001t0001g0023 a0001c0001t0001g0052 others(2): Show |
5 | HG00738.hp1 HG01069.hp1 NA18522.hp1 others(2): Show |
intron_variant | MODIFIER | c.2562+1405delT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 16/24 | chrX | 53398183 | |||||||
| chrX:53398368 | G | C | 1 | a0001c0001t0001g0026 | 1 | NA19030.hp1 | intron_variant | MODIFIER | c.2562+1221C>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 16/24 | chrX | 53398368 | |||||||
| chrX:53399453 | G | A | 3 | a0001c0001t0007g0010 a0001c0001t0007g0011 a0001c0003t0011g0141 |
3 | HG02280.hp1 HG02559.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.2562+136C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 16/24 | chrX | 53399453 | |||||||
| chrX:53400064 | A | G | 2 | a0001c0001t0002g0179 a0001c0001t0002g0188 |
2 | NA18960.hp1 NA19007.hp1 |
intron_variant | MODIFIER | c.2421-334T>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53400064 | |||||||
| chrX:53400274 | T | C | 1 | a0001c0001t0001g0075 | 1 | NA18612.hp1 | intron_variant | MODIFIER | c.2421-544A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53400274 | |||||||
| chrX:53400394 | C | T | 1 | a0001c0001t0001g0038 | 1 | HG02735.hp1 | intron_variant | MODIFIER | c.2421-664G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53400394 | |||||||
| chrX:53401048 | G | A | 1 | a0001c0001t0001g0143 | 1 | NA19075.hp1 | intron_variant | MODIFIER | c.2421-1318C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53401048 | |||||||
| chrX:53401049 | C | A | 1 | a0001c0001t0001g0143 | 1 | NA19075.hp1 | intron_variant | MODIFIER | c.2421-1319G>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53401049 | |||||||
| chrX:53401719 | GTATATAT others(6): Show |
G | 1 | a0001c0001t0001g0084 | 1 | HG04204.hp1 | intron_variant | MODIFIER | c.2420+1834_2420+184 others(17): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53401719 | |||||||
| chrX:53402299 | T | C | 1 | a0001c0001t0001g0128 | 1 | NA20300.hp1 | intron_variant | MODIFIER | c.2420+1267A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402299 | |||||||
| chrX:53402500 | T | C | 1 | a0001c0001t0014g0050 | 1 | HG02080.hp2 | intron_variant | MODIFIER | c.2420+1066A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402500 | |||||||
| chrX:53402718 | G | A | 3 | a0001c0001t0001g0068 a0001c0001t0002g0159 a0001c0001t0002g0169 |
3 | HG02015.hp1 NA18951.hp2 NA18952.hp1 |
intron_variant | MODIFIER | c.2420+848C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402718 | |||||||
| chrX:53402868 | C | CAAAAAAA others(3): Show |
43 | a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0005 others(40): Show |
47 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(44): Show |
intron_variant | MODIFIER | c.2420+688_2420+697d others(12): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402868 | C | CAAAAAAA others(4): Show |
23 | a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0160 others(20): Show |
23 | HG00438.hp2 HG00544.hp1 HG00621.hp1 others(20): Show |
intron_variant | MODIFIER | c.2420+687_2420+697d others(13): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402868 | C | CAAAAAAA others(5): Show |
1 | a0001c0001t0002g0163 | 1 | HG01981.hp2 | intron_variant | MODIFIER | c.2420+686_2420+697d others(14): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402868 | C | CAAAAAAA others(6): Show |
3 | a0001c0001t0002g0164 a0001c0002t0008g0096 a0001c0002t0008g0097 |
3 | HG02486.hp1 HG02922.hp1 NA18940.hp1 |
intron_variant | MODIFIER | c.2420+685_2420+697d others(15): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402868 | C | CAAAAAAA others(9): Show |
1 | a0001c0001t0007g0011 | 1 | HG02559.hp1 | intron_variant | MODIFIER | c.2420+682_2420+697d others(18): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402868 | C | CAAAAAAA others(10): Show |
1 | a0001c0001t0007g0010 | 1 | HG03579.hp1 | intron_variant | MODIFIER | c.2420+681_2420+697d others(19): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402868 | C | CAAAAAAA others(12): Show |
2 | a0001c0001t0001g0108 a0001c0001t0001g0116 |
2 | HG03225.hp1 HG03540.hp1 |
intron_variant | MODIFIER | c.2420+697_2420+698i others(21): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402868 | C | CAAAAAAA others(13): Show |
5 | a0001c0001t0001g0033 a0001c0001t0001g0037 a0001c0001t0001g0113 others(2): Show |
5 | HG01167.hp1 HG01169.hp2 HG02040.hp1 others(2): Show |
intron_variant | MODIFIER | c.2420+697_2420+698i others(22): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402868 | C | CAAAAAAA others(14): Show |
31 | a0001c0001t0001g0001 a0001c0001t0001g0018 a0001c0001t0001g0023 others(28): Show |
32 | HG00597.hp2 HG00735.hp1 HG00738.hp1 others(29): Show |
intron_variant | MODIFIER | c.2420+697_2420+698i others(23): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402868 | C | CAAAAAAA others(15): Show |
39 | a0001c0001t0001g0017 a0001c0001t0001g0021 a0001c0001t0001g0022 others(36): Show |
39 | HG00438.hp1 HG01243.hp1 HG01358.hp1 others(36): Show |
intron_variant | MODIFIER | c.2420+697_2420+698i others(24): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402868 | C | CAAAAAAA others(16): Show |
20 | a0001c0001t0001g0019 a0001c0001t0001g0029 a0001c0001t0001g0030 others(17): Show |
21 | HG00544.hp2 HG00735.hp2 HG01192.hp1 others(18): Show |
intron_variant | MODIFIER | c.2420+697_2420+698i others(25): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402868 | C | CAAAAAAA others(17): Show |
10 | a0001c0001t0001g0024 a0001c0001t0001g0045 a0001c0001t0001g0051 others(7): Show |
10 | HG00673.hp1 HG02615.hp2 HG02647.hp1 others(7): Show |
intron_variant | MODIFIER | c.2420+697_2420+698i others(26): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402868 | C | CAAAAAAA others(18): Show |
2 | a0001c0001t0001g0139 a0001c0001t0001g0140 |
2 | HG00323.hp1 HG02055.hp1 |
intron_variant | MODIFIER | c.2420+697_2420+698i others(27): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402868 | C | CAAAAAAA others(19): Show |
1 | a0001c0001t0001g0046 | 1 | NA18974.hp1 | intron_variant | MODIFIER | c.2420+697_2420+698i others(28): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402868 | C | CAAAAAAA others(20): Show |
1 | a0001c0001t0001g0118 | 1 | HG03453.hp2 | intron_variant | MODIFIER | c.2420+697_2420+698i others(29): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402868 | C | CAAAAAAA others(21): Show |
2 | a0001c0001t0001g0112 a0001c0001t0001g0131 |
2 | HG01884.hp1 HG02451.hp1 |
intron_variant | MODIFIER | c.2420+697_2420+698i others(30): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402868 | C | CAAAAAAA others(24): Show |
1 | a0001c0001t0001g0091 | 1 | HG01346.hp2 | intron_variant | MODIFIER | c.2420+697_2420+698i others(33): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402868 | C | CAAAAAAA others(26): Show |
2 | a0001c0001t0001g0047 a0001c0001t0001g0092 |
2 | HG01106.hp1 HG02615.hp1 |
intron_variant | MODIFIER | c.2420+697_2420+698i others(35): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402868 | C | CAAAAAAA others(32): Show |
1 | a0001c0001t0001g0070 | 1 | HG03453.hp1 | intron_variant | MODIFIER | c.2420+697_2420+698i others(41): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402868 | C | CAAAAAAA others(53): Show |
1 | a0001c0001t0001g0020 | 1 | HG03098.hp1 | intron_variant | MODIFIER | c.2420+697_2420+698i others(62): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402868 | |||||||
| chrX:53402885 | A | AAAAAAAA others(16): Show |
1 | a0001c0001t0001g0036 | 1 | NA18944.hp1 | intron_variant | MODIFIER | c.2420+680_2420+681i others(25): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402885 | |||||||
| chrX:53402885 | A | AAAAAAAA others(15): Show |
2 | a0001c0001t0001g0016 a0001c0001t0001g0054 |
2 | NA18948.hp1 NA19091.hp1 |
intron_variant | MODIFIER | c.2420+680_2420+681i others(24): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402885 | |||||||
| chrX:53402885 | A | AAAAAAAA others(14): Show |
1 | a0001c0001t0001g0053 | 1 | NA18982.hp1 | intron_variant | MODIFIER | c.2420+680_2420+681i others(23): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53402885 | |||||||
| chrX:53403171 | CA | C | 167 | a0001c0001t0001g0001 a0001c0001t0001g0012 a0001c0001t0001g0014 others(164): Show |
173 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(170): Show |
intron_variant | MODIFIER | c.2420+394delT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53403171 | |||||||
| chrX:53403171 | CAA | C | 18 | a0001c0001t0001g0018 a0001c0001t0001g0052 a0001c0001t0001g0131 others(15): Show |
18 | HG00597.hp1 HG00609.hp1 HG01069.hp1 others(15): Show |
intron_variant | MODIFIER | c.2420+393_2420+394d others(4): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53403171 | |||||||
| chrX:53403442 | T | C | 1 | a0001c0001t0002g0194 | 1 | NA18985.hp1 | intron_variant | MODIFIER | c.2420+124A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 15/24 | chrX | 53403442 | |||||||
| chrX:53403898 | A | G | 17 | a0001c0001t0001g0017 a0001c0001t0001g0021 a0001c0001t0001g0027 others(14): Show |
17 | HG00438.hp1 HG02040.hp1 HG02080.hp2 others(14): Show |
splice_region_variant&intron_variant | LOW | c.2197-5T>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 13/24 | chrX | 53403898 | |||||||
| chrX:53404248 | A | G | 1 | a0001c0001t0001g0012 | 1 | HG01884.hp2 | intron_variant | MODIFIER | c.2197-355T>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 13/24 | chrX | 53404248 | |||||||
| chrX:53404314 | T | TC | 12 | a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0063 others(9): Show |
12 | HG00735.hp1 HG01106.hp1 HG01109.hp1 others(9): Show |
intron_variant | MODIFIER | c.2197-422dupG | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 13/24 | chrX | 53404314 | |||||||
| chrX:53404470 | T | C | 1 | a0001c0001t0002g0175 | 1 | HG02155.hp1 | intron_variant | MODIFIER | c.2196+542A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 13/24 | chrX | 53404470 | |||||||
| chrX:53404697 | C | T | 1 | a0001c0001t0001g0015 | 1 | NA18522.hp1 | intron_variant | MODIFIER | c.2196+315G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 13/24 | chrX | 53404697 | |||||||
| chrX:53404752 | G | A | 50 | a0001c0001t0001g0015 a0001c0001t0001g0023 a0001c0001t0001g0024 others(47): Show |
51 | HG00735.hp1 HG00738.hp1 HG01167.hp1 others(48): Show |
intron_variant | MODIFIER | c.2196+260C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 13/24 | chrX | 53404752 | |||||||
| chrX:53404809 | A | G | 204 | a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0015 others(201): Show |
210 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(207): Show |
intron_variant | MODIFIER | c.2196+203T>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 13/24 | chrX | 53404809 | |||||||
| chrX:53404884 | T | C | 1 | a0001c0001t0001g0103 | 1 | HG02572.hp1 | intron_variant | MODIFIER | c.2196+128A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 13/24 | chrX | 53404884 | |||||||
| chrX:53406036 | G | C | 3 | a0001c0001t0001g0112 a0001c0001t0001g0136 a0001c0001t0001g0139 |
3 | HG02055.hp1 HG02451.hp1 HG03516.hp2 |
intron_variant | MODIFIER | c.1546-80C>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 9/24 | chrX | 53406036 | |||||||
| chrX:53406310 | T | C | 1 | a0001c0001t0002g0203 | 1 | HG00544.hp1 | intron_variant | MODIFIER | c.1546-354A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 9/24 | chrX | 53406310 | |||||||
| chrX:53406445 | C | A | 68 | a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0005 others(65): Show |
72 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(69): Show |
intron_variant | MODIFIER | c.1546-489G>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 9/24 | chrX | 53406445 | |||||||
| chrX:53406730 | C | T | 1 | a0001c0001t0005g0009 | 1 | HG02809.hp1 | intron_variant | MODIFIER | c.1546-774G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 9/24 | chrX | 53406730 | |||||||
| chrX:53407645 | C | A | 5 | a0001c0001t0004g0002 a0001c0001t0004g0098 a0001c0001t0004g0099 others(2): Show |
6 | HG00735.hp1 HG01891.hp1 HG01934.hp1 others(3): Show |
intron_variant | MODIFIER | c.1545+1417G>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 9/24 | chrX | 53407645 | |||||||
| chrX:53407839 | A | G | 1 | a0001c0001t0001g0128 | 1 | NA20300.hp1 | intron_variant | MODIFIER | c.1545+1223T>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 9/24 | chrX | 53407839 | |||||||
| chrX:53407930 | A | G | 2 | a0001c0001t0007g0010 a0001c0001t0007g0011 |
2 | HG02559.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.1545+1132T>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 9/24 | chrX | 53407930 | |||||||
| chrX:53408136 | C | T | 1 | a0001c0001t0001g0112 | 1 | HG02451.hp1 | intron_variant | MODIFIER | c.1545+926G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 9/24 | chrX | 53408136 | |||||||
| chrX:53408495 | T | C | 1 | a0001c0001t0001g0026 | 1 | NA19030.hp1 | intron_variant | MODIFIER | c.1545+567A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 9/24 | chrX | 53408495 | |||||||
| chrX:53408702 | G | C | 1 | a0001c0001t0001g0026 | 1 | NA19030.hp1 | intron_variant | MODIFIER | c.1545+360C>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 9/24 | chrX | 53408702 | |||||||
| chrX:53408742 | C | T | 1 | a0001c0001t0002g0177 | 1 | NA20300.hp2 | intron_variant | MODIFIER | c.1545+320G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 9/24 | chrX | 53408742 | |||||||
| chrX:53408756 | T | C | 1 | a0001c0001t0001g0024 | 1 | HG03516.hp1 | intron_variant | MODIFIER | c.1545+306A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 9/24 | chrX | 53408756 | |||||||
| chrX:53408840 | TA | T | 186 | a0001c0001t0001g0001 a0001c0001t0001g0017 a0001c0001t0001g0018 others(183): Show |
192 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(189): Show |
intron_variant | MODIFIER | c.1545+221delT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 9/24 | chrX | 53408840 | |||||||
| chrX:53408840 | TAA | T | 15 | a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 others(12): Show |
15 | HG00738.hp1 HG02109.hp1 HG02965.hp1 others(12): Show |
intron_variant | MODIFIER | c.1545+220_1545+221d others(4): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 9/24 | chrX | 53408840 | |||||||
| chrX:53409873 | G | A | 2 | a0001c0001t0002g0184 a0001c0001t0002g0185 |
2 | HG00099.hp1 HG01515.hp1 |
intron_variant | MODIFIER | c.1255-370C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53409873 | |||||||
| chrX:53410097 | C | T | 6 | a0001c0001t0005g0007 a0001c0001t0005g0008 a0001c0001t0005g0009 others(3): Show |
6 | HG02145.hp1 HG02280.hp1 HG02559.hp1 others(3): Show |
intron_variant | MODIFIER | c.1255-594G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410097 | |||||||
| chrX:53410232 | C | T | 3 | a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 |
3 | NA18988.hp1 NA18990.hp1 NA19005.hp1 |
intron_variant | MODIFIER | c.1255-729G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410232 | |||||||
| chrX:53410630 | T | C | 1 | a0001c0001t0002g0176 | 1 | HG00280.hp1 | intron_variant | MODIFIER | c.1255-1127A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410630 | |||||||
| chrX:53410926 | C | CAAAAAAA others(3): Show |
1 | a0001c0001t0003g0122 | 1 | HG01255.hp1 | intron_variant | MODIFIER | c.1254+825_1254+834d others(12): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(6): Show |
3 | a0001c0001t0004g0002 a0001c0001t0004g0098 a0001c0001t0004g0099 |
4 | HG01934.hp1 HG02717.hp1 HG03209.hp1 others(1): Show |
intron_variant | MODIFIER | c.1254+822_1254+834d others(15): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(7): Show |
2 | a0001c0001t0004g0115 a0001c0001t0004g0129 |
2 | HG00735.hp1 HG01891.hp1 |
intron_variant | MODIFIER | c.1254+821_1254+834d others(16): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(8): Show |
4 | a0001c0001t0001g0113 a0001c0001t0001g0134 a0001c0001t0003g0100 others(1): Show |
4 | HG01167.hp1 HG01891.hp2 HG02809.hp1 others(1): Show |
intron_variant | MODIFIER | c.1254+820_1254+834d others(17): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(9): Show |
7 | a0001c0001t0001g0014 a0001c0001t0001g0119 a0001c0001t0001g0123 others(4): Show |
7 | HG01169.hp2 HG01243.hp1 HG01884.hp1 others(4): Show |
intron_variant | MODIFIER | c.1254+819_1254+834d others(18): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(11): Show |
44 | a0001c0001t0001g0030 a0001c0001t0001g0051 a0001c0001t0001g0052 others(41): Show |
45 | HG00140.hp1 HG00280.hp1 HG00323.hp1 others(42): Show |
intron_variant | MODIFIER | c.1254+817_1254+834d others(20): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(12): Show |
25 | a0001c0001t0001g0020 a0001c0001t0001g0032 a0001c0001t0001g0059 others(22): Show |
26 | HG00099.hp1 HG01515.hp1 HG01943.hp1 others(23): Show |
intron_variant | MODIFIER | c.1254+816_1254+834d others(21): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(13): Show |
12 | a0001c0001t0001g0065 a0001c0001t0001g0067 a0001c0001t0001g0068 others(9): Show |
12 | HG00597.hp1 HG01192.hp1 HG02015.hp1 others(9): Show |
intron_variant | MODIFIER | c.1254+834_1254+835i others(22): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(14): Show |
7 | a0001c0001t0001g0071 a0001c0001t0001g0116 a0001c0001t0001g0118 others(4): Show |
7 | HG00597.hp2 HG02257.hp1 HG03453.hp2 others(4): Show |
intron_variant | MODIFIER | c.1254+834_1254+835i others(23): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(15): Show |
4 | a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0117 others(1): Show |
4 | HG02258.hp1 HG02886.hp1 HG03516.hp1 others(1): Show |
intron_variant | MODIFIER | c.1254+834_1254+835i others(24): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(16): Show |
2 | a0001c0001t0001g0102 a0001c0001t0001g0103 |
2 | HG02451.hp2 HG02572.hp1 |
intron_variant | MODIFIER | c.1254+834_1254+835i others(25): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(17): Show |
1 | a0001c0001t0003g0114 | 1 | HG02922.hp2 | intron_variant | MODIFIER | c.1254+834_1254+835i others(26): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(18): Show |
1 | a0001c0001t0003g0125 | 1 | HG03130.hp1 | intron_variant | MODIFIER | c.1254+834_1254+835i others(27): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(19): Show |
2 | a0001c0001t0001g0104 a0001c0002t0008g0096 |
2 | HG02109.hp1 HG02922.hp1 |
intron_variant | MODIFIER | c.1254+834_1254+835i others(28): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(20): Show |
2 | a0001c0001t0001g0105 a0001c0002t0008g0097 |
2 | HG02486.hp1 NA19030.hp2 |
intron_variant | MODIFIER | c.1254+834_1254+835i others(29): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(22): Show |
1 | a0001c0001t0002g0189 | 1 | HG01109.hp1 | intron_variant | MODIFIER | c.1254+834_1254+835i others(31): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(28): Show |
1 | a0001c0001t0001g0095 | 1 | HG02280.hp2 | intron_variant | MODIFIER | c.1254+834_1254+835i others(37): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(29): Show |
2 | a0001c0001t0001g0106 a0001c0001t0001g0107 |
2 | HG02559.hp2 NA21309.hp2 |
intron_variant | MODIFIER | c.1254+834_1254+835i others(38): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(30): Show |
2 | a0001c0001t0001g0108 a0001c0001t0003g0126 |
2 | HG02965.hp1 HG03225.hp1 |
intron_variant | MODIFIER | c.1254+834_1254+835i others(39): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(32): Show |
3 | a0001c0001t0001g0094 a0001c0001t0001g0110 a0001c0001t0015g0109 |
3 | HG02622.hp1 HG02886.hp2 HG02895.hp1 |
intron_variant | MODIFIER | c.1254+834_1254+835i others(41): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(35): Show |
1 | a0001c0001t0001g0127 | 1 | HG02809.hp2 | intron_variant | MODIFIER | c.1254+834_1254+835i others(44): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53410926 | C | CAAAAAAA others(39): Show |
1 | a0001c0001t0001g0111 | 1 | HG03471.hp1 | intron_variant | MODIFIER | c.1254+834_1254+835i others(48): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53410926 | |||||||
| chrX:53411358 | G | A | 1 | a0001c0001t0001g0086 | 1 | HG03831.hp2 | intron_variant | MODIFIER | c.1254+403C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53411358 | |||||||
| chrX:53411705 | C | T | 3 | a0001c0001t0001g0032 a0001c0001t0002g0145 a0001c0001t0002g0154 |
3 | HG02622.hp2 NA20752.hp1 NA21309.hp1 |
intron_variant | MODIFIER | c.1254+56G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 7/24 | chrX | 53411705 | |||||||
| chrX:53412268 | G | A | 2 | a0001c0001t0001g0112 a0001c0001t0001g0139 |
2 | HG02055.hp1 HG02451.hp1 |
intron_variant | MODIFIER | c.855-15C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 5/24 | chrX | 53412268 | |||||||
| chrX:53412738 | T | C | 1 | a0001c0001t0001g0073 | 1 | HG02300.hp1 | intron_variant | MODIFIER | c.854+162A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 5/24 | chrX | 53412738 | |||||||
| chrX:53413445 | G | A | 10 | a0001c0001t0001g0113 a0001c0001t0001g0119 a0001c0001t0001g0123 others(7): Show |
10 | HG01167.hp1 HG01169.hp2 HG01255.hp1 others(7): Show |
intron_variant | MODIFIER | c.412-10C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 3/24 | chrX | 53413445 | |||||||
| chrX:53413880 | C | G | 4 | a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0002t0008g0096 others(1): Show |
4 | HG02486.hp1 HG02886.hp1 HG02922.hp1 others(1): Show |
intron_variant | MODIFIER | c.412-445G>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 3/24 | chrX | 53413880 | |||||||
| chrX:53413985 | G | A | 1 | a0001c0001t0002g0190 | 1 | HG00099.hp2 | intron_variant | MODIFIER | c.412-550C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 3/24 | chrX | 53413985 | |||||||
| chrX:53414062 | C | A | 1 | a0001c0001t0001g0074 | 1 | HG02080.hp1 | intron_variant | MODIFIER | c.412-627G>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 3/24 | chrX | 53414062 | |||||||
| chrX:53414075 | CA | C | 192 | a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0015 others(189): Show |
198 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(195): Show |
intron_variant | MODIFIER | c.412-641delT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 3/24 | chrX | 53414075 | |||||||
| chrX:53414687 | G | C | 5 | a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 others(2): Show |
5 | NA18612.hp1 NA18967.hp1 NA18971.hp1 others(2): Show |
intron_variant | MODIFIER | c.411+71C>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 3/24 | chrX | 53414687 | |||||||
| chrX:53414962 | T | C | 2 | a0001c0001t0001g0116 a0001c0001t0001g0117 |
2 | HG02886.hp1 HG03540.hp1 |
intron_variant | MODIFIER | c.298+19A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 2/24 | chrX | 53414962 | |||||||
| chrX:53415427 | C | G | 1 | a0001c0001t0001g0031 | 1 | NA20905.hp1 | intron_variant | MODIFIER | c.110-258G>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53415427 | |||||||
| chrX:53415621 | C | T | 3 | a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 |
3 | NA18988.hp1 NA18990.hp1 NA19005.hp1 |
intron_variant | MODIFIER | c.110-452G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53415621 | |||||||
| chrX:53415622 | GT | G | 2 | a0001c0001t0001g0080 a0001c0001t0001g0081 |
2 | HG00673.hp1 NA19000.hp1 |
intron_variant | MODIFIER | c.110-454delA | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53415622 | |||||||
| chrX:53415666 | C | CA | 12 | a0001c0001t0001g0086 a0001c0001t0001g0134 a0001c0001t0001g0135 others(9): Show |
12 | HG01891.hp1 HG01891.hp2 HG02071.hp1 others(9): Show |
intron_variant | MODIFIER | c.110-498dupT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53415666 | |||||||
| chrX:53415666 | CA | C | 6 | a0001c0001t0001g0027 a0001c0001t0001g0095 a0001c0001t0001g0119 others(3): Show |
6 | HG01169.hp2 HG02280.hp2 HG03490.hp1 others(3): Show |
intron_variant | MODIFIER | c.110-498delT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53415666 | |||||||
| chrX:53415831 | T | TA | 197 | a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0015 others(194): Show |
203 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(200): Show |
intron_variant | MODIFIER | c.110-663dupT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53415831 | |||||||
| chrX:53415843 | G | GA | 12 | a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0090 others(9): Show |
12 | HG01884.hp1 HG02055.hp1 HG02280.hp1 others(9): Show |
intron_variant | MODIFIER | c.110-675dupT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53415843 | |||||||
| chrX:53415985 | C | T | 3 | a0001c0001t0007g0010 a0001c0001t0007g0011 a0001c0003t0011g0141 |
3 | HG02280.hp1 HG02559.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.110-816G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53415985 | |||||||
| chrX:53416167 | G | A | 2 | a0001c0001t0001g0084 a0001c0001t0001g0086 |
2 | HG03831.hp2 HG04204.hp1 |
intron_variant | MODIFIER | c.110-998C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53416167 | |||||||
| chrX:53416310 | A | T | 1 | a0001c0001t0001g0025 | 1 | NA18953.hp1 | intron_variant | MODIFIER | c.110-1141T>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53416310 | |||||||
| chrX:53416315 | T | A | 1 | a0001c0001t0002g0144 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.110-1146A>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53416315 | |||||||
| chrX:53416670 | A | G | 2 | a0001c0001t0002g0149 a0001c0001t0002g0150 |
2 | HG02155.hp2 NA18942.hp1 |
intron_variant | MODIFIER | c.110-1501T>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53416670 | |||||||
| chrX:53416793 | G | A | 2 | a0001c0001t0010g0195 a0001c0001t0010g0196 |
2 | HG00642.hp1 HG01175.hp2 |
intron_variant | MODIFIER | c.110-1624C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53416793 | |||||||
| chrX:53417189 | C | T | 1 | a0001c0001t0001g0014 | 1 | HG03139.hp1 | intron_variant | MODIFIER | c.110-2020G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53417189 | |||||||
| chrX:53417300 | C | T | 50 | a0001c0001t0001g0015 a0001c0001t0001g0023 a0001c0001t0001g0024 others(47): Show |
51 | HG00735.hp1 HG00738.hp1 HG01167.hp1 others(48): Show |
intron_variant | MODIFIER | c.110-2131G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53417300 | |||||||
| chrX:53417551 | C | CA | 7 | a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0002g0197 others(4): Show |
7 | HG00140.hp1 HG02738.hp1 HG03831.hp1 others(4): Show |
intron_variant | MODIFIER | c.110-2383dupT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53417551 | |||||||
| chrX:53417551 | CA | C | 8 | a0001c0001t0001g0022 a0001c0001t0001g0119 a0001c0001t0001g0131 others(5): Show |
8 | HG01074.hp1 HG01169.hp2 HG01884.hp1 others(5): Show |
intron_variant | MODIFIER | c.110-2383delT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53417551 | |||||||
| chrX:53418165 | C | T | 6 | a0001c0001t0005g0007 a0001c0001t0005g0008 a0001c0001t0005g0009 others(3): Show |
6 | HG02145.hp1 HG02280.hp1 HG02559.hp1 others(3): Show |
intron_variant | MODIFIER | c.110-2996G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53418165 | |||||||
| chrX:53418174 | T | C | 1 | a0001c0001t0001g0021 | 1 | NA18951.hp1 | intron_variant | MODIFIER | c.110-3005A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53418174 | |||||||
| chrX:53419019 | C | T | 1 | a0001c0001t0002g0144 | 1 | NA19063.hp1 | intron_variant | MODIFIER | c.109+3473G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53419019 | |||||||
| chrX:53419040 | C | CA | 18 | a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0001g0090 others(15): Show |
18 | HG00438.hp1 HG01169.hp2 HG01255.hp1 others(15): Show |
intron_variant | MODIFIER | c.109+3451dupT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53419040 | |||||||
| chrX:53419040 | CA | C | 70 | a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 others(67): Show |
74 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(71): Show |
intron_variant | MODIFIER | c.109+3451delT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53419040 | |||||||
| chrX:53419083 | A | G | 1 | a0001c0001t0001g0094 | 1 | HG02886.hp2 | intron_variant | MODIFIER | c.109+3409T>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53419083 | |||||||
| chrX:53419123 | G | A | 1 | a0001c0001t0001g0091 | 1 | HG01346.hp2 | intron_variant | MODIFIER | c.109+3369C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53419123 | |||||||
| chrX:53419173 | C | G | 1 | a0001c0001t0001g0014 | 1 | HG03139.hp1 | intron_variant | MODIFIER | c.109+3319G>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53419173 | |||||||
| chrX:53419196 | A | G | 68 | a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0005 others(65): Show |
72 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(69): Show |
intron_variant | MODIFIER | c.109+3296T>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53419196 | |||||||
| chrX:53419295 | C | T | 3 | a0001c0001t0005g0007 a0001c0001t0005g0008 a0001c0001t0005g0009 |
3 | HG02145.hp1 HG02809.hp1 HG03041.hp2 |
intron_variant | MODIFIER | c.109+3197G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53419295 | |||||||
| chrX:53419536 | A | AG | 6 | a0001c0001t0005g0007 a0001c0001t0005g0008 a0001c0001t0005g0009 others(3): Show |
6 | HG02145.hp1 HG02280.hp1 HG02559.hp1 others(3): Show |
intron_variant | MODIFIER | c.109+2955_109+2956i others(3): Show |
SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53419536 | |||||||
| chrX:53419697 | G | A | 3 | a0001c0001t0007g0010 a0001c0001t0007g0011 a0001c0003t0011g0141 |
3 | HG02280.hp1 HG02559.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.109+2795C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53419697 | |||||||
| chrX:53419748 | C | T | 68 | a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0005 others(65): Show |
72 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(69): Show |
intron_variant | MODIFIER | c.109+2744G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53419748 | |||||||
| chrX:53419823 | C | CA | 12 | a0001c0001t0001g0092 a0001c0001t0001g0131 a0001c0001t0001g0133 others(9): Show |
12 | HG00323.hp1 HG01106.hp1 HG01243.hp1 others(9): Show |
intron_variant | MODIFIER | c.109+2668dupT | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53419823 | |||||||
| chrX:53419890 | C | A | 1 | a0001c0001t0001g0093 | 1 | NA18989.hp1 | intron_variant | MODIFIER | c.109+2602G>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53419890 | |||||||
| chrX:53420015 | C | T | 3 | a0001c0001t0005g0007 a0001c0001t0005g0008 a0001c0001t0005g0009 |
3 | HG02145.hp1 HG02809.hp1 HG03041.hp2 |
intron_variant | MODIFIER | c.109+2477G>A | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53420015 | |||||||
| chrX:53420056 | T | C | 204 | a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0015 others(201): Show |
210 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(207): Show |
intron_variant | MODIFIER | c.109+2436A>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53420056 | |||||||
| chrX:53420404 | G | C | 48 | a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0102 others(45): Show |
49 | HG00323.hp1 HG00735.hp1 HG01167.hp1 others(46): Show |
intron_variant | MODIFIER | c.109+2088C>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53420404 | |||||||
| chrX:53420507 | G | C | 2 | a0001c0001t0002g0206 a0001c0001t0002g0207 |
2 | NA18955.hp1 NA19082.hp1 |
intron_variant | MODIFIER | c.109+1985C>G | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53420507 | |||||||
| chrX:53421873 | A | G | 6 | a0001c0001t0005g0007 a0001c0001t0005g0008 a0001c0001t0005g0009 others(3): Show |
6 | HG02145.hp1 HG02280.hp1 HG02559.hp1 others(3): Show |
intron_variant | MODIFIER | c.109+619T>C | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53421873 | |||||||
| chrX:53421956 | G | A | 1 | a0001c0003t0011g0141 | 1 | HG02280.hp1 | intron_variant | MODIFIER | c.109+536C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53421956 | |||||||
| chrX:53422170 | G | A | 2 | a0001c0001t0001g0142 a0001c0001t0001g0143 |
2 | NA19075.hp1 NA20805.hp1 |
intron_variant | MODIFIER | c.109+322C>T | SMC1A | ENSG00000072501.19 | transcript | ENST00000322213.9 | protein_coding | 1/24 | chrX | 53422170 |