Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	chapid	clen	total	AFR	AMR	EAS	EUR	SAS	cseq	genename	chr	start	end
ACO1_chr9_32379643_32459769	0/0	c0005	2670	6	6	0	0	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0006	2670	6	6	0	0	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0007	2670	5	5	0	0	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0008	2670	2	1	1	0	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0009	2670	2	2	0	0	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0010	2670	2	2	0	0	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0011	2670	2	2	0	0	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0012	2670	2	2	0	0	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0013	2670	1	0	0	0	0	1	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0014	2670	1	0	0	1	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0015	2670	1	0	0	1	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0016	2670	1	0	0	1	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0017	2670	1	1	0	0	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0018	2670	1	1	0	0	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0019	2670	1	1	0	0	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0020	2670	1	0	0	1	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0021	2670	1	0	0	1	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0022	2670	1	0	1	0	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0023	2670	1	1	0	0	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0024	2670	1	0	0	1	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0025	2670	1	1	0	0	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0026	2670	1	1	0	0	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0027	2670	1	1	0	0	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0028	2670	1	0	1	0	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	c0029	2670	1	0	0	1	0	0	copy fasta	ACO1	chr9	32379643	32459769
ACO2_chr22_41464117_41533974	0/0	c0001	2343	146	30	29	69	3	15	copy fasta	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	1/0	c0002	2343	90	39	12	28	3	7	copy fasta	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/1	c0003	2343	85	11	17	40	6	10	copy fasta	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	c0004	2343	4	4	0	0	0	0	copy fasta	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	c0005	2343	2	2	0	0	0	0	copy fasta	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	c0006	2343	2	2	0	0	0	0	copy fasta	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	c0007	2343	1	0	0	1	0	0	copy fasta	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	c0008	2343	1	1	0	0	0	0	copy fasta	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	c0009	2343	1	0	0	1	0	0	copy fasta	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	c0010	2343	1	1	0	0	0	0	copy fasta	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	c0011	2343	1	0	0	1	0	0	copy fasta	ACO2	chr22	41464117	41533974
ACOD1_chr13_76943511_76963638	1/1	c0001	1446	337	62	52	175	11	35	copy fasta	ACOD1	chr13	76943511	76963638
ACOD1_chr13_76943511_76963638	0/0	c0002	1446	60	7	21	27	1	4	copy fasta	ACOD1	chr13	76943511	76963638
ACOD1_chr13_76943511_76963638	0/0	c0003	1446	19	16	3	0	0	0	copy fasta	ACOD1	chr13	76943511	76963638
ACOD1_chr13_76943511_76963638	0/0	c0004	1446	7	0	5	0	2	0	copy fasta	ACOD1	chr13	76943511	76963638
ACOD1_chr13_76943511_76963638	0/0	c0005	1446	3	2	0	0	1	0	copy fasta	ACOD1	chr13	76943511	76963638
ACOD1_chr13_76943511_76963638	0/0	c0006	1446	2	2	0	0	0	0	copy fasta	ACOD1	chr13	76943511	76963638
ACOD1_chr13_76943511_76963638	0/0	c0007	1446	1	0	0	0	1	0	copy fasta	ACOD1	chr13	76943511	76963638
ACOD1_chr13_76943511_76963638	0/0	c0008	1446	1	0	1	0	0	0	copy fasta	ACOD1	chr13	76943511	76963638
ACOD1_chr13_76943511_76963638	0/0	c0009	1446	1	0	0	0	0	1	copy fasta	ACOD1	chr13	76943511	76963638
ACOD1_chr13_76943511_76963638	0/0	c0010	1446	1	1	0	0	0	0	copy fasta	ACOD1	chr13	76943511	76963638
ACOD1_chr13_76943511_76963638	0/0	c0011	1446	1	1	0	0	0	0	copy fasta	ACOD1	chr13	76943511	76963638
ACOD1_chr13_76943511_76963638	0/0	c0012	1446	1	1	0	0	0	0	copy fasta	ACOD1	chr13	76943511	76963638
ACOT11_chr1_54543228_54615329	1/1	c0001	1785	168	8	52	68	11	27	copy fasta	ACOT11	chr1	54543228	54615329
ACOT11_chr1_54543228_54615329	0/0	c0002	1785	57	29	9	8	0	11	copy fasta	ACOT11	chr1	54543228	54615329