JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WNT16_chr7_121324000_121346104	0/0	g0116	1	1	0	0	0	0	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0117	1	0	0	1	0	0	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0118	1	0	0	1	0	0	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0119	1	0	0	0	1	0	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0120	1	1	0	0	0	0	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0121	1	1	0	0	0	0	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0122	1	0	1	0	0	0	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0123	1	1	0	0	0	0	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0124	1	0	1	0	0	0	WNT16	chr7	121324000	121346104
WNT16_chr7_121324000_121346104	0/0	g0125	1	0	0	1	0	0	WNT16	chr7	121324000	121346104
WNT1_chr12_48973322_48987620	1/1	g0001	394	92	72	170	16	42	WNT1	chr12	48973322	48987620
WNT1_chr12_48973322_48987620	0/0	g0002	2	0	2	0	0	0	WNT1	chr12	48973322	48987620
WNT2B_chr1_112503965_112535165	0/0	g0001	51	1	11	39	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0002	39	1	9	13	6	10	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0003	18	5	5	4	1	3	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0004	17	0	7	7	2	1	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0005	16	0	0	16	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0006	11	0	0	11	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0007	10	0	10	0	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0008	9	0	1	8	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0009	7	0	0	7	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0010	6	5	1	0	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0011	6	0	1	5	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0012	6	6	0	0	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0013	5	0	0	5	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0014	5	5	0	0	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0015	5	0	0	5	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0016	4	4	0	0	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0017	4	1	2	1	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0018	4	0	0	4	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0019	4	4	0	0	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0020	4	0	0	4	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0021	3	3	0	0	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0022	3	0	3	0	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0023	3	0	0	3	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0024	3	1	0	0	1	1	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0025	3	0	0	0	2	1	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0026	3	0	0	3	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0027	3	0	2	0	1	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0028	3	1	1	0	0	1	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0029	3	0	0	3	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0030	2	2	0	0	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0031	2	0	0	0	0	2	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0032	2	0	1	1	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0033	2	2	0	0	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	1/0	g0034	2	1	0	0	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/1	g0035	2	0	1	0	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0036	2	2	0	0	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0037	2	0	0	2	0	0	WNT2B	chr1	112503965	112535165
WNT2B_chr1_112503965_112535165	0/0	g0038	2	0	0	2	0	0	WNT2B	chr1	112503965	112535165