JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
WRN_chr8_31028810_31181138	0/0	g0248	1	1	0	0	0	0	WRN	chr8	31028810	31181138
WRN_chr8_31028810_31181138	0/0	g0249	1	1	0	0	0	0	WRN	chr8	31028810	31181138
WRN_chr8_31028810_31181138	0/0	g0250	1	1	0	0	0	0	WRN	chr8	31028810	31181138
WRN_chr8_31028810_31181138	0/0	g0251	1	1	0	0	0	0	WRN	chr8	31028810	31181138
WRN_chr8_31028810_31181138	0/0	g0252	1	1	0	0	0	0	WRN	chr8	31028810	31181138
WRN_chr8_31028810_31181138	0/0	g0253	1	1	0	0	0	0	WRN	chr8	31028810	31181138
WRN_chr8_31028810_31181138	0/0	g0254	1	0	0	0	0	1	WRN	chr8	31028810	31181138
WRN_chr8_31028810_31181138	0/0	g0255	1	1	0	0	0	0	WRN	chr8	31028810	31181138
WRN_chr8_31028810_31181138	0/0	g0256	1	1	0	0	0	0	WRN	chr8	31028810	31181138
WRN_chr8_31028810_31181138	0/0	g0257	1	1	0	0	0	0	WRN	chr8	31028810	31181138
WRN_chr8_31028810_31181138	0/0	g0258	1	0	1	0	0	0	WRN	chr8	31028810	31181138
WRN_chr8_31028810_31181138	0/0	g0259	1	1	0	0	0	0	WRN	chr8	31028810	31181138
WRN_chr8_31028810_31181138	0/0	g0260	1	1	0	0	0	0	WRN	chr8	31028810	31181138
WRN_chr8_31028810_31181138	0/0	g0261	1	0	0	1	0	0	WRN	chr8	31028810	31181138
WRN_chr8_31028810_31181138	0/0	g0262	1	1	0	0	0	0	WRN	chr8	31028810	31181138
WRN_chr8_31028810_31181138	0/0	g0263	1	1	0	0	0	0	WRN	chr8	31028810	31181138
WRN_chr8_31028810_31181138	0/0	g0264	1	0	0	0	0	1	WRN	chr8	31028810	31181138
WSB1_chr17_27289114_27320926	0/0	g0001	34	1	12	14	1	6	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/1	g0002	20	0	4	12	1	2	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0003	8	2	2	4	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0004	6	3	0	3	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0005	5	5	0	0	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0006	5	0	0	5	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0007	4	4	0	0	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0008	4	0	0	4	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0009	4	1	3	0	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0010	3	0	3	0	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0011	3	0	0	1	0	2	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0012	3	0	0	3	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0013	3	0	0	3	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0014	3	0	0	3	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0015	3	0	2	1	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0016	3	0	0	0	0	3	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0017	3	3	0	0	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0018	2	2	0	0	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0019	2	2	0	0	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0020	2	2	0	0	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0021	2	2	0	0	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0022	2	2	0	0	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0023	2	2	0	0	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0024	2	2	0	0	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0025	2	0	2	0	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0026	2	0	1	1	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0027	2	0	0	1	1	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0028	2	2	0	0	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0029	2	0	0	2	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0030	2	0	1	1	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0031	2	0	0	2	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0032	2	1	1	0	0	0	WSB1	chr17	27289114	27320926
WSB1_chr17_27289114_27320926	0/0	g0033	2	0	1	0	1	0	WSB1	chr17	27289114	27320926