JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZBTB44_chr11_130221677_130319917	0/0	g0268	1	0	0	1	0	0	ZBTB44	chr11	130221677	130319917
ZBTB44_chr11_130221677_130319917	0/0	g0269	1	0	0	1	0	0	ZBTB44	chr11	130221677	130319917
ZBTB44_chr11_130221677_130319917	0/0	g0270	1	1	0	0	0	0	ZBTB44	chr11	130221677	130319917
ZBTB44_chr11_130221677_130319917	0/0	g0271	1	1	0	0	0	0	ZBTB44	chr11	130221677	130319917
ZBTB44_chr11_130221677_130319917	0/0	g0272	1	1	0	0	0	0	ZBTB44	chr11	130221677	130319917
ZBTB44_chr11_130221677_130319917	0/0	g0273	1	0	0	0	0	1	ZBTB44	chr11	130221677	130319917
ZBTB44_chr11_130221677_130319917	0/0	g0274	1	1	0	0	0	0	ZBTB44	chr11	130221677	130319917
ZBTB44_chr11_130221677_130319917	0/0	g0275	1	0	0	1	0	0	ZBTB44	chr11	130221677	130319917
ZBTB44_chr11_130221677_130319917	0/0	g0276	1	0	0	1	0	0	ZBTB44	chr11	130221677	130319917
ZBTB44_chr11_130221677_130319917	0/0	g0277	1	1	0	0	0	0	ZBTB44	chr11	130221677	130319917
ZBTB44_chr11_130221677_130319917	0/0	g0278	1	1	0	0	0	0	ZBTB44	chr11	130221677	130319917
ZBTB44_chr11_130221677_130319917	0/0	g0279	1	1	0	0	0	0	ZBTB44	chr11	130221677	130319917
ZBTB44_chr11_130221677_130319917	0/0	g0280	1	1	0	0	0	0	ZBTB44	chr11	130221677	130319917
ZBTB44_chr11_130221677_130319917	0/0	g0281	1	1	0	0	0	0	ZBTB44	chr11	130221677	130319917
ZBTB44_chr11_130221677_130319917	0/0	g0282	1	1	0	0	0	0	ZBTB44	chr11	130221677	130319917
ZBTB44_chr11_130221677_130319917	0/0	g0283	1	0	0	1	0	0	ZBTB44	chr11	130221677	130319917
ZBTB44_chr11_130221677_130319917	0/0	g0284	1	0	0	1	0	0	ZBTB44	chr11	130221677	130319917
ZBTB44_chr11_130221677_130319917	0/0	g0285	1	0	0	1	0	0	ZBTB44	chr11	130221677	130319917
ZBTB44_chr11_130221677_130319917	1/0	g0286	1	0	0	0	0	0	ZBTB44	chr11	130221677	130319917
ZBTB45_chr19_58508530_58524810	0/0	g0001	133	14	18	90	7	4	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0002	65	2	17	29	4	13	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0003	31	7	9	7	1	7	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0004	25	1	6	12	2	4	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0005	15	9	0	4	0	2	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0006	9	1	8	0	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0007	9	9	0	0	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0008	8	7	1	0	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/1	g0009	8	2	2	0	1	2	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0010	8	0	0	7	1	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0011	7	1	4	0	0	2	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0012	5	5	0	0	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0013	5	1	3	0	1	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0014	4	0	0	4	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0015	4	3	1	0	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0016	4	4	0	0	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0017	3	3	0	0	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0018	3	2	1	0	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0019	2	2	0	0	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0020	2	2	0	0	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0021	2	2	0	0	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0022	2	0	0	2	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0023	2	1	1	0	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0024	2	0	0	2	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0025	2	0	0	2	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0026	2	2	0	0	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0027	2	0	0	2	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0028	2	0	0	2	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0029	2	0	1	0	0	1	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0030	2	0	2	0	0	0	ZBTB45	chr19	58508530	58524810
ZBTB45_chr19_58508530_58524810	0/0	g0031	2	0	0	1	0	1	ZBTB45	chr19	58508530	58524810