JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ACO1_chr9_32379643_32459769	0/0	g0311	1	0	0	0	1	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0312	1	1	0	0	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0313	1	0	1	0	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0314	1	1	0	0	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0315	1	1	0	0	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0316	1	1	0	0	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0317	1	1	0	0	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0318	1	1	0	0	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0319	1	1	0	0	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0320	1	0	1	0	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0321	1	0	1	0	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0322	1	0	1	0	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0323	1	1	0	0	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0324	1	1	0	0	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0325	1	0	0	1	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0326	1	0	1	0	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0327	1	0	1	0	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0328	1	1	0	0	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0329	1	0	0	1	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0330	1	1	0	0	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0331	1	0	0	1	0	0	ACO1	chr9	32379643	32459769
ACO1_chr9_32379643_32459769	0/0	g0332	1	0	0	1	0	0	ACO1	chr9	32379643	32459769
ACO2_chr22_41464117_41533974	0/0	g0001	3	0	0	3	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0002	3	0	0	3	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0003	3	0	0	3	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0004	3	0	0	3	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0005	2	2	0	0	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/1	g0006	2	0	0	0	1	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0007	2	0	0	2	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0008	2	0	0	2	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0009	2	0	0	0	0	2	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0010	2	0	2	0	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0011	2	0	0	2	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0012	2	0	0	0	1	1	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0013	1	1	0	0	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0014	1	0	1	0	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0015	1	0	1	0	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0016	1	0	0	1	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0017	1	0	0	1	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0018	1	0	0	1	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0019	1	0	0	1	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0020	1	0	0	1	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0021	1	1	0	0	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0022	1	1	0	0	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0023	1	1	0	0	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0024	1	1	0	0	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0025	1	1	0	0	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0026	1	1	0	0	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0027	1	1	0	0	0	0	ACO2	chr22	41464117	41533974
ACO2_chr22_41464117_41533974	0/0	g0028	1	1	0	0	0	0	ACO2	chr22	41464117	41533974