JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	ghapid	total	AFR	AMR	EAS	EUR	SAS	genename	chr	start	end
ZNF804B_chr7_88754700_89343528	0/0	g0147	1	1	0	0	0	0	ZNF804B	chr7	88754700	89343528
ZNF804B_chr7_88754700_89343528	0/0	g0148	1	0	0	1	0	0	ZNF804B	chr7	88754700	89343528
ZNF804B_chr7_88754700_89343528	0/0	g0149	1	0	0	1	0	0	ZNF804B	chr7	88754700	89343528
ZNF804B_chr7_88754700_89343528	0/0	g0150	1	0	0	1	0	0	ZNF804B	chr7	88754700	89343528
ZNF804B_chr7_88754700_89343528	0/0	g0151	1	0	1	0	0	0	ZNF804B	chr7	88754700	89343528
ZNF804B_chr7_88754700_89343528	0/0	g0152	1	0	1	0	0	0	ZNF804B	chr7	88754700	89343528
ZNF804B_chr7_88754700_89343528	0/0	g0153	1	0	0	1	0	0	ZNF804B	chr7	88754700	89343528
ZNF804B_chr7_88754700_89343528	0/0	g0154	1	0	0	0	0	1	ZNF804B	chr7	88754700	89343528
ZNF804B_chr7_88754700_89343528	0/0	g0155	1	0	0	0	0	1	ZNF804B	chr7	88754700	89343528
ZNF804B_chr7_88754700_89343528	0/0	g0156	1	0	0	0	0	1	ZNF804B	chr7	88754700	89343528
ZNF804B_chr7_88754700_89343528	0/0	g0157	1	0	0	0	0	1	ZNF804B	chr7	88754700	89343528
ZNF804B_chr7_88754700_89343528	0/0	g0158	1	1	0	0	0	0	ZNF804B	chr7	88754700	89343528
ZNF804B_chr7_88754700_89343528	0/0	g0159	1	1	0	0	0	0	ZNF804B	chr7	88754700	89343528
ZNF804B_chr7_88754700_89343528	0/0	g0160	1	1	0	0	0	0	ZNF804B	chr7	88754700	89343528
ZNF804B_chr7_88754700_89343528	0/0	g0161	1	1	0	0	0	0	ZNF804B	chr7	88754700	89343528
ZNF804B_chr7_88754700_89343528	0/0	g0162	1	1	0	0	0	0	ZNF804B	chr7	88754700	89343528
ZNF804B_chr7_88754700_89343528	0/0	g0163	1	0	1	0	0	0	ZNF804B	chr7	88754700	89343528
ZNF804B_chr7_88754700_89343528	0/0	g0164	1	1	0	0	0	0	ZNF804B	chr7	88754700	89343528
ZNF804B_chr7_88754700_89343528	0/0	g0165	1	1	0	0	0	0	ZNF804B	chr7	88754700	89343528
ZNF804B_chr7_88754700_89343528	0/0	g0166	1	1	0	0	0	0	ZNF804B	chr7	88754700	89343528
ZNF805_chr19_57235632_57267728	1/0	g0001	33	1	6	19	1	5	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0002	25	1	8	9	2	5	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0003	15	0	5	7	0	3	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0004	14	0	0	10	0	4	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0005	6	6	0	0	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0006	6	5	1	0	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0007	5	0	0	5	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0008	5	0	0	5	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0009	5	2	2	0	0	1	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0010	4	4	0	0	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0011	4	0	1	3	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0012	4	0	0	4	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0013	4	0	0	4	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0014	4	4	0	0	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0015	4	0	2	0	1	1	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0016	4	1	1	0	0	2	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0017	4	0	0	4	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0018	4	0	0	4	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0019	3	3	0	0	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0020	3	0	0	3	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0021	3	0	0	2	1	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0022	3	0	1	2	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0023	3	3	0	0	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0024	3	0	3	0	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0025	2	2	0	0	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0026	2	0	0	2	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0027	2	0	0	2	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0028	2	0	0	2	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0029	2	0	0	2	0	0	ZNF805	chr19	57235632	57267728
ZNF805_chr19_57235632_57267728	0/0	g0030	2	0	0	2	0	0	ZNF805	chr19	57235632	57267728