JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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Choose a field to sort by.

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
ENAH_chr1_225481829_225658123	0/0	t0065	11392	1	0	0	1	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0066	11391	1	0	1	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0067	11390	1	1	0	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0068	11391	1	0	0	0	1	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0069	11391	1	0	0	1	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0070	11393	1	0	1	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0071	11391	1	1	0	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0072	11392	1	1	0	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0073	11390	1	0	0	1	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0074	11391	1	0	1	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0075	11388	1	1	0	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0076	11391	1	0	1	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0077	11391	1	1	0	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0078	11385	1	1	0	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0079	11387	1	1	0	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0080	11387	1	1	0	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0081	11391	1	0	0	1	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0082	11392	1	0	1	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0083	11391	1	0	0	0	0	1	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0084	11389	1	0	0	1	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	1/0	t0085	11380	1	0	0	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0086	11384	1	0	0	0	0	1	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0087	11385	1	1	0	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0088	11388	1	1	0	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0089	11388	1	1	0	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0090	11390	1	0	0	1	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0091	11390	1	0	0	1	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0092	11389	1	0	0	0	0	1	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0093	11389	1	0	0	0	0	1	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0094	11390	1	0	1	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0095	11390	1	0	0	1	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0096	11390	1	0	0	1	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0097	11391	1	0	0	1	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0098	11389	1	0	1	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0099	11386	1	1	0	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0100	11386	1	0	0	1	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0101	11382	1	0	0	1	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0102	11392	1	1	0	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0103	11389	1	0	1	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0104	11386	1	1	0	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0105	11384	1	1	0	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0106	11387	1	1	0	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0107	11384	1	0	1	0	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0108	11384	1	0	0	1	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0109	11384	1	0	0	0	0	1	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0110	11386	1	0	0	1	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0111	11386	1	0	0	1	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0112	11390	1	0	0	1	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0113	11390	1	0	0	1	0	0	copy fasta	ENAH	chr1	225481829	225658123
ENAH_chr1_225481829_225658123	0/0	t0114	11385	1	1	0	0	0	0	copy fasta	ENAH	chr1	225481829	225658123