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geneid	377630
ensemblid	ENSG00000223443.3
hgncid	34434
symbol	USP17L2
name	ubiquitin specific peptidase 17 like family member 2
refseq_nuc	NM_201402.3
refseq_prot	NP_958804.2
ensembl_nuc	ENST00000333796.4
ensembl_prot	ENSP00000333329.3
mane_status	MANE Select
chr	chr8
start	12136435
end	12138849
strand	-
ver	v1.2
region	chr8:12136435-12138849
region5000	chr8:12131435-12143849
regionname0	USP17L2_chr8_12136435_12138849
regionname5000	USP17L2_chr8_12131435_12143849

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0000	0/0	0	17	12	0	2	0	3	1	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0001	0/0	530	55	4	19	25	3	4	21	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0002	0/0	530	55	0	7	43	1	4	31	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0003	1/0	530	22	6	5	6	0	4	5	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0004	0/0	530	8	0	1	7	0	0	7	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0005	0/0	530	6	6	0	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0006	0/0	530	5	3	1	0	0	1	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0007	0/0	530	4	4	0	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0008	0/0	530	3	0	0	3	0	0	2	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0009	0/0	530	3	0	1	0	0	2	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0010	0/0	530	3	3	0	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0011	0/0	530	2	2	0	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0012	0/0	530	2	0	0	2	0	0	2	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0013	0/0	530	1	0	0	1	0	0	1	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0014	0/0	530	1	1	0	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0015	0/0	530	1	0	0	1	0	0	1	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0016	0/0	530	1	0	0	1	0	0	1	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0017	0/0	530	1	0	0	1	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0018	0/0	530	1	1	0	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0019	0/0	530	1	0	0	1	0	0	1	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0020	0/0	530	1	0	0	1	0	0	1	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0021	0/0	530	1	0	0	1	0	0	1	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0022	0/0	530	1	0	0	1	0	0	1	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0000	0/0	0	17	12	0	2	0	3	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0001	0/0	1593	55	0	7	43	1	4	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0002	0/0	1593	41	4	11	21	1	4	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0003	1/0	1593	21	5	5	6	0	4	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0004	0/0	1593	8	0	1	7	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0005	0/0	1593	6	0	5	0	1	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0006	0/0	1593	6	6	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0007	0/0	1593	5	3	1	0	0	1	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0008	0/0	1593	3	0	0	3	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0009	0/0	1593	3	0	1	0	0	2	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0010	0/0	1593	3	3	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0011	0/0	1593	3	3	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0012	0/0	1593	3	0	2	0	1	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0013	0/0	1593	3	0	0	3	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0014	0/0	1593	2	0	0	2	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0015	0/0	1593	2	2	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0016	0/0	1593	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0017	0/0	1593	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0018	0/0	1593	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0019	0/0	1593	1	1	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0020	0/0	1593	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0021	0/0	1593	1	0	1	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0022	0/0	1593	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0023	0/0	1593	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0024	0/0	1593	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0025	0/0	1593	1	1	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0026	0/0	1593	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0027	0/0	1593	1	1	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0028	0/0	1593	1	1	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
c0029	0/0	1593	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0000	0/0	0	17	12	0	2	0	3	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
t0001	0/0	823	70	10	18	35	2	5	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
t0002	0/0	823	62	3	7	48	1	3	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
t0003	0/0	823	24	9	5	6	0	4	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
t0004	0/0	823	6	5	1	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
t0005	0/0	823	4	3	0	0	0	1	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
t0006	0/0	823	2	0	2	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
t0007	1/0	823	1	0	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
t0008	0/0	823	1	0	0	0	0	1	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
t0009	0/0	823	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
t0010	0/0	823	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
t0011	0/0	823	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
t0012	0/0	823	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
t0013	0/0	823	1	0	0	0	1	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
t0014	0/0	823	1	0	1	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
t0015	0/0	823	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
t0016	0/0	823	1	0	0	0	0	1	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0000	1/0	195	42	34	96	4	18	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0000c0000	0/0	0	17	12	0	2	0	3	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0001c0002	0/0	1593	41	4	11	21	1	4	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0001c0005	0/0	1593	6	0	5	0	1	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0001c0012	0/0	1593	3	0	2	0	1	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0001c0013	0/0	1593	3	0	0	3	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0001c0021	0/0	1593	1	0	1	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0001c0022	0/0	1593	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0002c0001	0/0	1593	55	0	7	43	1	4	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0003c0003	1/0	1593	21	5	5	6	0	4	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0003c0025	0/0	1593	1	1	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0004c0004	0/0	1593	8	0	1	7	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0005c0006	0/0	1593	6	6	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0006c0007	0/0	1593	5	3	1	0	0	1	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0007c0011	0/0	1593	3	3	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0007c0028	0/0	1593	1	1	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0008c0008	0/0	1593	3	0	0	3	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0009c0009	0/0	1593	3	0	1	0	0	2	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0010c0010	0/0	1593	3	3	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0011c0015	0/0	1593	2	2	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0012c0014	0/0	1593	2	0	0	2	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0013c0029	0/0	1593	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0014c0027	0/0	1593	1	1	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0015c0024	0/0	1593	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0016c0023	0/0	1593	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0017c0026	0/0	1593	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0018c0019	0/0	1593	1	1	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0019c0018	0/0	1593	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0020c0017	0/0	1593	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0021c0016	0/0	1593	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0022c0020	0/0	1593	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0000c0000t0000	0/0	0	17	12	0	2	0	3	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0001c0002t0001	0/0	2415	39	4	11	20	1	3	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0001c0002t0008	0/0	2415	1	0	0	0	0	1	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0001c0002t0010	0/0	2415	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0001c0005t0001	0/0	2415	4	0	3	0	1	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0001c0005t0006	0/0	2415	2	0	2	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0001c0012t0001	0/0	2415	2	0	2	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0001c0012t0013	0/0	2415	1	0	0	0	1	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0001c0013t0001	0/0	2415	2	0	0	2	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0001c0013t0011	0/0	2415	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0001c0021t0001	0/0	2415	1	0	1	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0001c0022t0012	0/0	2415	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0002c0001t0002	0/0	2415	52	0	7	41	1	3	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0002c0001t0009	0/0	2415	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0002c0001t0015	0/0	2415	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0002c0001t0016	0/0	2415	1	0	0	0	0	1	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0003c0003t0003	0/0	2415	20	5	5	6	0	4	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0003c0003t0007	1/0	2415	1	0	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0003c0025t0004	0/0	2415	1	1	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0004c0004t0001	0/0	2415	7	0	0	7	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0004c0004t0014	0/0	2415	1	0	1	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0005c0006t0001	0/0	2415	6	6	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0006c0007t0004	0/0	2415	1	0	1	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0006c0007t0005	0/0	2415	4	3	0	0	0	1	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0007c0011t0004	0/0	2415	3	3	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0007c0028t0004	0/0	2415	1	1	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0008c0008t0001	0/0	2415	3	0	0	3	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0009c0009t0001	0/0	2415	3	0	1	0	0	2	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0010c0010t0003	0/0	2415	3	3	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0011c0015t0002	0/0	2415	2	2	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0012c0014t0002	0/0	2415	2	0	0	2	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0013c0029t0002	0/0	2415	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0014c0027t0003	0/0	2415	1	1	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0015c0024t0001	0/0	2415	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0016c0023t0001	0/0	2415	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0017c0026t0001	0/0	2415	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0018c0019t0002	0/0	2415	1	1	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0019c0018t0002	0/0	2415	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0020c0017t0002	0/0	2415	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0021c0016t0002	0/0	2415	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849
a0022c0020t0002	0/0	2415	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	copy fasta	chr8	12131435	12143849

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0000c0000t0000g0000	0/0	17	12	0	2	0	3	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0001c0002t0001g0000	0/0	39	4	11	20	1	3	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0001c0002t0008g0000	0/0	1	0	0	0	0	1	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0001c0002t0010g0000	0/0	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0001c0005t0001g0000	0/0	4	0	3	0	1	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0001c0005t0006g0000	0/0	2	0	2	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0001c0012t0001g0000	0/0	2	0	2	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0001c0012t0013g0000	0/0	1	0	0	0	1	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0001c0013t0001g0000	0/0	2	0	0	2	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0001c0013t0011g0000	0/0	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0001c0021t0001g0000	0/0	1	0	1	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0001c0022t0012g0000	0/0	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0002c0001t0002g0000	0/0	52	0	7	41	1	3	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0002c0001t0009g0000	0/0	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0002c0001t0015g0000	0/0	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0002c0001t0016g0000	0/0	1	0	0	0	0	1	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0003c0003t0003g0000	0/0	20	5	5	6	0	4	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0003c0003t0007g0000	1/0	1	0	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0003c0025t0004g0000	0/0	1	1	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0004c0004t0001g0000	0/0	7	0	0	7	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0004c0004t0014g0000	0/0	1	0	1	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0005c0006t0001g0000	0/0	6	6	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0006c0007t0004g0000	0/0	1	0	1	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0006c0007t0005g0000	0/0	4	3	0	0	0	1	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0007c0011t0004g0000	0/0	3	3	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0007c0028t0004g0000	0/0	1	1	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0008c0008t0001g0000	0/0	3	0	0	3	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0009c0009t0001g0000	0/0	3	0	1	0	0	2	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0010c0010t0003g0000	0/0	3	3	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0011c0015t0002g0000	0/0	2	2	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0012c0014t0002g0000	0/0	2	0	0	2	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0013c0029t0002g0000	0/0	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0014c0027t0003g0000	0/0	1	1	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0015c0024t0001g0000	0/0	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0016c0023t0001g0000	0/0	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0017c0026t0001g0000	0/0	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0018c0019t0002g0000	0/0	1	1	0	0	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0019c0018t0002g0000	0/0	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0020c0017t0002g0000	0/0	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0021c0016t0002g0000	0/0	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0022c0020t0002g0000	0/0	1	0	0	1	0	0	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00140	hp1	a0002	c0001	t0002	g0000	EUR	GBR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00140	hp2	a0001	c0012	t0013	g0000	EUR	GBR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00408	hp1	a0002	c0001	t0002	g0000	EAS	CHS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00408	hp2	a0003	c0003	t0003	g0000	EAS	CHS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00438	hp1	a0002	c0001	t0002	g0000	EAS	CHS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00438	hp2	a0001	c0002	t0001	g0000	EAS	CHS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00558	hp1	a0002	c0001	t0002	g0000	EAS	CHS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00558	hp2	a0001	c0002	t0001	g0000	EAS	CHS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00597	hp1	a0002	c0001	t0002	g0000	EAS	CHS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00597	hp2	a0002	c0001	t0002	g0000	EAS	CHS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00733	hp1	a0006	c0007	t0004	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00733	hp2	a0001	c0005	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01071	hp1	a0002	c0001	t0002	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01071	hp2	a0001	c0002	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01167	hp1	a0003	c0003	t0003	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01167	hp2	a0001	c0002	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01168	hp1	a0001	c0005	t0006	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01168	hp2	a0001	c0002	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01169	hp1	a0001	c0002	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01169	hp2	a0001	c0005	t0006	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01175	hp1	a0003	c0003	t0003	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01175	hp2	a0001	c0005	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01243	hp1	a0001	c0012	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01243	hp2	a0003	c0003	t0003	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01258	hp1	a0001	c0005	t0001	g0000	AMR	CLM	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01258	hp2	a0001	c0021	t0001	g0000	AMR	CLM	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01516	hp1	a0001	c0002	t0001	g0000	EUR	IBS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01516	hp2	a0001	c0005	t0001	g0000	EUR	IBS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01943	hp1	a0002	c0001	t0002	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01943	hp2	a0001	c0002	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01975	hp1	a0002	c0001	t0002	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01975	hp2	a0004	c0004	t0014	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01978	hp1	a0003	c0003	t0003	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01978	hp2	a0001	c0002	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01981	hp1	a0001	c0002	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01981	hp2	a0001	c0012	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01993	hp1	a0003	c0003	t0003	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01993	hp2	a0001	c0002	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02015	hp1	a0002	c0001	t0002	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02015	hp2	a0001	c0002	t0001	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02080	hp1	a0002	c0001	t0002	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02080	hp2	a0001	c0002	t0001	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02129	hp1	a0017	c0026	t0001	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02129	hp2	a0002	c0001	t0002	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02135	hp1	a0002	c0001	t0015	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02135	hp2	a0002	c0001	t0002	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02145	hp1	a0005	c0006	t0001	g0000	AFR	ACB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02145	hp2	a0000	c0000	t0000	g0000	AFR	ACB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02258	hp1	a0005	c0006	t0001	g0000	AFR	ACB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02258	hp2	a0003	c0003	t0003	g0000	AFR	ACB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02273	hp1	a0002	c0001	t0002	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02273	hp2	a0001	c0002	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02293	hp1	a0002	c0001	t0002	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02293	hp2	a0001	c0002	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02300	hp1	a0002	c0001	t0002	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02300	hp2	a0001	c0002	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02523	hp1	a0002	c0001	t0002	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02523	hp2	a0008	c0008	t0001	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02615	hp1	a0005	c0006	t0001	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02615	hp2	a0001	c0002	t0001	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02647	hp1	a0011	c0015	t0002	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02647	hp2	a0010	c0010	t0003	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02717	hp1	a0010	c0010	t0003	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02717	hp2	a0000	c0000	t0000	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02735	hp1	a0002	c0001	t0016	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02735	hp2	a0006	c0007	t0005	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02809	hp1	a0003	c0025	t0004	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02809	hp2	a0001	c0002	t0001	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02886	hp1	a0003	c0003	t0003	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02886	hp2	a0005	c0006	t0001	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02897	hp1	a0007	c0011	t0004	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02897	hp2	a0005	c0006	t0001	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02922	hp1	a0018	c0019	t0002	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02922	hp2	a0000	c0000	t0000	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02965	hp1	a0000	c0000	t0000	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02965	hp2	a0007	c0011	t0004	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02970	hp1	a0000	c0000	t0000	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02970	hp2	a0003	c0003	t0003	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03017	hp1	a0002	c0001	t0002	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03017	hp2	a0009	c0009	t0001	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03041	hp1	a0006	c0007	t0005	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03041	hp2	a0000	c0000	t0000	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03130	hp1	a0007	c0011	t0004	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03130	hp2	a0000	c0000	t0000	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03139	hp1	a0000	c0000	t0000	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03139	hp2	a0001	c0002	t0001	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03209	hp1	a0000	c0000	t0000	g0000	AFR	MSL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03209	hp2	a0006	c0007	t0005	g0000	AFR	MSL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03225	hp1	a0010	c0010	t0003	g0000	AFR	MSL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03225	hp2	a0003	c0003	t0003	g0000	AFR	MSL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03453	hp1	a0007	c0028	t0004	g0000	AFR	MSL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03453	hp2	a0000	c0000	t0000	g0000	AFR	MSL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03492	hp1	a0000	c0000	t0000	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03492	hp2	a0001	c0002	t0001	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03540	hp1	a0000	c0000	t0000	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03540	hp2	a0011	c0015	t0002	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03688	hp1	a0000	c0000	t0000	g0000	SAS	STU	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03688	hp2	a0001	c0002	t0008	g0000	SAS	STU	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03704	hp1	a0003	c0003	t0003	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03704	hp2	a0009	c0009	t0001	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03710	hp1	a0003	c0003	t0003	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03710	hp2	a0001	c0002	t0001	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03831	hp1	a0002	c0001	t0002	g0000	SAS	BEB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03831	hp2	a0001	c0002	t0001	g0000	SAS	BEB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG04115	hp1	a0003	c0003	t0003	g0000	SAS	STU	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG04115	hp2	a0002	c0001	t0002	g0000	SAS	STU	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG04199	hp1	a0003	c0003	t0003	g0000	SAS	STU	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG04199	hp2	a0000	c0000	t0000	g0000	SAS	STU	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18747	hp1	a0002	c0001	t0002	g0000	EAS	CHB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18747	hp2	a0000	c0000	t0000	g0000	EAS	CHB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18939	hp1	a0021	c0016	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18939	hp2	a0015	c0024	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18940	hp1	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18940	hp2	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18943	hp1	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18943	hp2	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18945	hp1	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18945	hp2	a0004	c0004	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18949	hp1	a0001	c0002	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18949	hp2	a0022	c0020	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18950	hp1	a0003	c0003	t0003	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18950	hp2	a0008	c0008	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18951	hp1	a0001	c0002	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18951	hp2	a0001	c0002	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18960	hp1	a0004	c0004	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18960	hp2	a0003	c0003	t0003	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18961	hp1	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18961	hp2	a0001	c0022	t0012	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18963	hp1	a0001	c0002	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18963	hp2	a0001	c0002	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18964	hp1	a0004	c0004	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18964	hp2	a0020	c0017	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18966	hp1	a0001	c0002	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18966	hp2	a0000	c0000	t0000	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18968	hp1	a0008	c0008	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18968	hp2	a0001	c0002	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18969	hp1	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18969	hp2	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18970	hp1	a0013	c0029	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18970	hp2	a0003	c0003	t0003	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18977	hp1	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18977	hp2	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18986	hp1	a0001	c0002	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18986	hp2	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18988	hp1	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18988	hp2	a0001	c0002	t0010	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18992	hp1	a0019	c0018	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18992	hp2	a0001	c0002	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18995	hp1	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18995	hp2	a0001	c0002	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18997	hp1	a0004	c0004	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18997	hp2	a0002	c0001	t0009	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18998	hp1	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18998	hp2	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19000	hp1	a0001	c0002	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19000	hp2	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19004	hp1	a0012	c0014	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19004	hp2	a0001	c0013	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19006	hp1	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19006	hp2	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19007	hp1	a0003	c0003	t0003	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19007	hp2	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19009	hp1	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19009	hp2	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19010	hp1	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19010	hp2	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19012	hp1	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19012	hp2	a0004	c0004	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19030	hp1	a0005	c0006	t0001	g0000	AFR	LWK	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19030	hp2	a0003	c0003	t0003	g0000	AFR	LWK	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19059	hp1	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19059	hp2	a0001	c0002	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19064	hp1	a0004	c0004	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19064	hp2	a0003	c0003	t0003	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19066	hp1	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19066	hp2	a0004	c0004	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19072	hp1	a0012	c0014	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19072	hp2	a0001	c0013	t0011	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19079	hp1	a0001	c0013	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19079	hp2	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19082	hp1	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19082	hp2	a0001	c0002	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19083	hp1	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19083	hp2	a0001	c0002	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19084	hp1	a0001	c0002	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19084	hp2	a0016	c0023	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19087	hp1	a0002	c0001	t0002	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19087	hp2	a0001	c0002	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01123	hp1	a0009	c0009	t0001	g0000	AMR	CLM	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01123	hp2	a0002	c0001	t0002	g0000	AMR	CLM	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02109	hp1	a0000	c0000	t0000	g0000	AFR	ACB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02109	hp2	a0014	c0027	t0003	g0000	AFR	ACB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA20300	hp1	a0006	c0007	t0005	g0000	AFR	USA	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA20300	hp2	a0001	c0002	t0001	g0000	AFR	USA	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
homoSapiens_grch38	hp1	a0003	c0003	t0007	g0000	REF	REF	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr8:12137195	G G	T T	1	a0020 a0020	1	NA18964.hp2 NA18964.hp2	missense_variant	MODERATE	c.1566C>A c.1566C>A	p.Ser522Arg p.Ser522Arg	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1655/2415	1566/1593	522/530	chr8	12137195
chr8:12137211	C C	T T	1	a0016 a0016	1	NA19084.hp2 NA19084.hp2	missense_variant	MODERATE	c.1550G>A c.1550G>A	p.Gly517Glu p.Gly517Glu	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1639/2415	1550/1593	517/530	chr8	12137211
chr8:12137400	T T	A A	1	a0019 a0019	1	NA18992.hp1 NA18992.hp1	missense_variant	MODERATE	c.1361A>T c.1361A>T	p.Lys454Ile p.Lys454Ile	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1450/2415	1361/1593	454/530	chr8	12137400
chr8:12137448	T T	C C	8	a0001 a0004 a0005 others(5): Show a0001 a0004 a0005 a0008 a0009 a0015 a0016 a0017	78	HG00140.hp2 HG00438.hp2 HG00558.hp2 others(75): Show HG00140.hp2 HG00438.hp2 HG00558.hp2 HG00733.hp2 HG01071.hp2 HG01123.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01243.hp1 HG01258.hp1 HG01258.hp2 HG01516.hp1 HG01516.hp2 HG01943.hp2 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp2 HG02080.hp2 HG02129.hp1 HG02145.hp1 HG02258.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp2 HG02523.hp2 HG02615.hp1 HG02615.hp2 HG02809.hp2 HG02886.hp2 HG02897.hp2 HG03017.hp2 HG03139.hp2 HG03492.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG03831.hp2 NA18939.hp2 NA18945.hp2 NA18949.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18960.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18986.hp1 NA18988.hp2 NA18992.hp2 NA18995.hp2 NA18997.hp1 NA19000.hp1 NA19004.hp2 NA19012.hp2 NA19030.hp1 NA19059.hp2 NA19064.hp1 NA19066.hp2 NA19072.hp2 NA19079.hp1 NA19082.hp2 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp2 NA20300.hp2	missense_variant	MODERATE	c.1313A>G c.1313A>G	p.Lys438Arg p.Lys438Arg	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1402/2415	1313/1593	438/530	chr8	12137448
chr8:12137494	G G	A A	1	a0015 a0015	1	NA18939.hp2 NA18939.hp2	missense_variant	MODERATE	c.1267C>T c.1267C>T	p.Arg423Cys p.Arg423Cys	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1356/2415	1267/1593	423/530	chr8	12137494
chr8:12137525	G G	T T	1	a0021 a0021	1	NA18939.hp1 NA18939.hp1	missense_variant	MODERATE	c.1236C>A c.1236C>A	p.His412Gln p.His412Gln	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1325/2415	1236/1593	412/530	chr8	12137525
chr8:12137553	G G	A A	8	a0002 a0011 a0012 others(5): Show a0002 a0011 a0012 a0013 a0019 a0020 a0021 a0022	64	HG00140.hp1 HG00408.hp1 HG00438.hp1 others(61): Show HG00140.hp1 HG00408.hp1 HG00438.hp1 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG01071.hp1 HG01123.hp2 HG01943.hp1 HG01975.hp1 HG02015.hp1 HG02080.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02273.hp1 HG02293.hp1 HG02300.hp1 HG02523.hp1 HG02647.hp1 HG02735.hp1 HG03017.hp1 HG03540.hp2 HG03831.hp1 HG04115.hp2 NA18747.hp1 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18949.hp2 NA18961.hp1 NA18964.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18977.hp1 NA18977.hp2 NA18986.hp2 NA18988.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19004.hp1 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19059.hp1 NA19066.hp1 NA19072.hp1 NA19079.hp2 NA19082.hp1 NA19083.hp1 NA19087.hp1	missense_variant	MODERATE	c.1208C>T c.1208C>T	p.Ala403Val p.Ala403Val	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1297/2415	1208/1593	403/530	chr8	12137553
chr8:12137577	C C	T T	1	a0012 a0012	2	NA19004.hp1 NA19072.hp1 NA19004.hp1 NA19072.hp1	missense_variant	MODERATE	c.1184G>A c.1184G>A	p.Gly395Asp p.Gly395Asp	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1273/2415	1184/1593	395/530	chr8	12137577
chr8:12137578	C C	T T	1	a0005 a0005	6	HG02145.hp1 HG02258.hp1 HG02615.hp1 others(3): Show HG02145.hp1 HG02258.hp1 HG02615.hp1 HG02886.hp2 HG02897.hp2 NA19030.hp1	missense_variant	MODERATE	c.1183G>A c.1183G>A	p.Gly395Ser p.Gly395Ser	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1272/2415	1183/1593	395/530	chr8	12137578
chr8:12137613	T T	C C	1	a0017 a0017	1	HG02129.hp1 HG02129.hp1	missense_variant	MODERATE	c.1148A>G c.1148A>G	p.Glu383Gly p.Glu383Gly	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1237/2415	1148/1593	383/530	chr8	12137613
chr8:12137739	G G	A A	1	a0009 a0009	3	HG01123.hp1 HG03017.hp2 HG03704.hp2 HG01123.hp1 HG03017.hp2 HG03704.hp2	missense_variant	MODERATE	c.1022C>T c.1022C>T	p.Ala341Val p.Ala341Val	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1111/2415	1022/1593	341/530	chr8	12137739
chr8:12137767	C C	T T	1	a0007 a0007	4	HG02897.hp1 HG02965.hp2 HG03130.hp1 others(1): Show HG02897.hp1 HG02965.hp2 HG03130.hp1 HG03453.hp1	missense_variant	MODERATE	c.994G>A c.994G>A	p.Asp332Asn p.Asp332Asn	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1083/2415	994/1593	332/530	chr8	12137767
chr8:12137966	C C	G G	2	a0010 a0014 a0010 a0014	4	HG02109.hp2 HG02647.hp2 HG02717.hp1 others(1): Show HG02109.hp2 HG02647.hp2 HG02717.hp1 HG03225.hp1	missense_variant	MODERATE	c.795G>C c.795G>C	p.Lys265Asn p.Lys265Asn	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	884/2415	795/1593	265/530	chr8	12137966
chr8:12138031	C C	T T	7	a0002 a0012 a0013 others(4): Show a0002 a0012 a0013 a0019 a0020 a0021 a0022	62	HG00140.hp1 HG00408.hp1 HG00438.hp1 others(59): Show HG00140.hp1 HG00408.hp1 HG00438.hp1 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG01071.hp1 HG01123.hp2 HG01943.hp1 HG01975.hp1 HG02015.hp1 HG02080.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02273.hp1 HG02293.hp1 HG02300.hp1 HG02523.hp1 HG02735.hp1 HG03017.hp1 HG03831.hp1 HG04115.hp2 NA18747.hp1 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18949.hp2 NA18961.hp1 NA18964.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18977.hp1 NA18977.hp2 NA18986.hp2 NA18988.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19004.hp1 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19059.hp1 NA19066.hp1 NA19072.hp1 NA19079.hp2 NA19082.hp1 NA19083.hp1 NA19087.hp1	missense_variant	MODERATE	c.730G>A c.730G>A	p.Glu244Lys p.Glu244Lys	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	819/2415	730/1593	244/530	chr8	12138031
chr8:12138121	A A	G G	1	a0007 a0007	4	HG02897.hp1 HG02965.hp2 HG03130.hp1 others(1): Show HG02897.hp1 HG02965.hp2 HG03130.hp1 HG03453.hp1	missense_variant	MODERATE	c.640T>C c.640T>C	p.Ser214Pro p.Ser214Pro	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	729/2415	640/1593	214/530	chr8	12138121
chr8:12138233	G G	C C	1	a0008 a0008	3	HG02523.hp2 NA18950.hp2 NA18968.hp1 HG02523.hp2 NA18950.hp2 NA18968.hp1	missense_variant	MODERATE	c.528C>G c.528C>G	p.Cys176Trp p.Cys176Trp	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	617/2415	528/1593	176/530	chr8	12138233
chr8:12138276	T T	A A	1	a0006 a0006	5	HG00733.hp1 HG02735.hp2 HG03041.hp1 others(2): Show HG00733.hp1 HG02735.hp2 HG03041.hp1 HG03209.hp2 NA20300.hp1	missense_variant	MODERATE	c.485A>T c.485A>T	p.His162Leu p.His162Leu	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	574/2415	485/1593	162/530	chr8	12138276
chr8:12138430	G G	A A	1	a0017 a0017	1	HG02129.hp1 HG02129.hp1	missense_variant	MODERATE	c.331C>T c.331C>T	p.Arg111Trp p.Arg111Trp	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	420/2415	331/1593	111/530	chr8	12138430
chr8:12138517	G G	A A	1	a0014 a0014	1	HG02109.hp2 HG02109.hp2	missense_variant	MODERATE	c.244C>T c.244C>T	p.Leu82Phe p.Leu82Phe	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	333/2415	244/1593	82/530	chr8	12138517
chr8:12138565	T T	C C	1	a0007 a0007	4	HG02897.hp1 HG02965.hp2 HG03130.hp1 others(1): Show HG02897.hp1 HG02965.hp2 HG03130.hp1 HG03453.hp1	missense_variant	MODERATE	c.196A>G c.196A>G	p.Lys66Glu p.Lys66Glu	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	285/2415	196/1593	66/530	chr8	12138565
chr8:12138577	G G	A A	9	a0002 a0011 a0012 others(6): Show a0002 a0011 a0012 a0013 a0018 a0019 a0020 a0021 a0022	65	HG00140.hp1 HG00408.hp1 HG00438.hp1 others(62): Show HG00140.hp1 HG00408.hp1 HG00438.hp1 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG01071.hp1 HG01123.hp2 HG01943.hp1 HG01975.hp1 HG02015.hp1 HG02080.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02273.hp1 HG02293.hp1 HG02300.hp1 HG02523.hp1 HG02647.hp1 HG02735.hp1 HG02922.hp1 HG03017.hp1 HG03540.hp2 HG03831.hp1 HG04115.hp2 NA18747.hp1 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18949.hp2 NA18961.hp1 NA18964.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18977.hp1 NA18977.hp2 NA18986.hp2 NA18988.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19004.hp1 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19059.hp1 NA19066.hp1 NA19072.hp1 NA19079.hp2 NA19082.hp1 NA19083.hp1 NA19087.hp1	missense_variant	MODERATE	c.184C>T c.184C>T	p.Leu62Phe p.Leu62Phe	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	273/2415	184/1593	62/530	chr8	12138577
chr8:12138578	C C	G G	2	a0004 a0008 a0004 a0008	11	HG01975.hp2 HG02523.hp2 NA18945.hp2 others(8): Show HG01975.hp2 HG02523.hp2 NA18945.hp2 NA18950.hp2 NA18960.hp1 NA18964.hp1 NA18968.hp1 NA18997.hp1 NA19012.hp2 NA19064.hp1 NA19066.hp2	missense_variant	MODERATE	c.183G>C c.183G>C	p.Gln61His p.Gln61His	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	272/2415	183/1593	61/530	chr8	12138578
chr8:12138603	T T	C C	1	a0022 a0022	1	NA18949.hp2 NA18949.hp2	missense_variant	MODERATE	c.158A>G c.158A>G	p.Asp53Gly p.Asp53Gly	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	247/2415	158/1593	53/530	chr8	12138603
chr8:12138641	C C	G G	8	a0002 a0011 a0012 others(5): Show a0002 a0011 a0012 a0018 a0019 a0020 a0021 a0022	64	HG00140.hp1 HG00408.hp1 HG00438.hp1 others(61): Show HG00140.hp1 HG00408.hp1 HG00438.hp1 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG01071.hp1 HG01123.hp2 HG01943.hp1 HG01975.hp1 HG02015.hp1 HG02080.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02273.hp1 HG02293.hp1 HG02300.hp1 HG02523.hp1 HG02647.hp1 HG02735.hp1 HG02922.hp1 HG03017.hp1 HG03540.hp2 HG03831.hp1 HG04115.hp2 NA18747.hp1 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18949.hp2 NA18961.hp1 NA18964.hp2 NA18969.hp1 NA18969.hp2 NA18977.hp1 NA18977.hp2 NA18986.hp2 NA18988.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19004.hp1 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19059.hp1 NA19066.hp1 NA19072.hp1 NA19079.hp2 NA19082.hp1 NA19083.hp1 NA19087.hp1	missense_variant	MODERATE	c.120G>C c.120G>C	p.Lys40Asn p.Lys40Asn	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	209/2415	120/1593	40/530	chr8	12138641

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr8:12137354	C C	T T	1	a0001c0022 a0001c0022	1	NA18961.hp2 NA18961.hp2	synonymous_variant	LOW	c.1407G>A c.1407G>A	p.Ser469Ser p.Ser469Ser	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1496/2415	1407/1593	469/530	chr8	12137354
chr8:12137507	G G	A A	1	a0007c0011 a0007c0011	3	HG02897.hp1 HG02965.hp2 HG03130.hp1 HG02897.hp1 HG02965.hp2 HG03130.hp1	synonymous_variant	LOW	c.1254C>T c.1254C>T	p.Pro418Pro p.Pro418Pro	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1343/2415	1254/1593	418/530	chr8	12137507
chr8:12137765	G G	A A	24	a0001c0002 a0001c0005 a0001c0012 others(21): Show a0001c0002 a0001c0005 a0001c0012 a0001c0013 a0001c0021 a0001c0022 a0002c0001 a0003c0025 a0004c0004 a0005c0006 a0006c0007 a0008c0008 a0009c0009 a0011c0015 a0012c0014 a0013c0029 a0015c0024 a0016c0023 a0017c0026 a0018c0019 a0019c0018 a0020c0017 a0021c0016 a0022c0020	149	HG00140.hp1 HG00140.hp2 HG00408.hp1 others(146): Show HG00140.hp1 HG00140.hp2 HG00408.hp1 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00733.hp1 HG00733.hp2 HG01071.hp1 HG01071.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01243.hp1 HG01258.hp1 HG01258.hp2 HG01516.hp1 HG01516.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02080.hp1 HG02080.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02615.hp1 HG02615.hp2 HG02647.hp1 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02897.hp2 HG02922.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03139.hp2 HG03209.hp2 HG03492.hp2 HG03540.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG04115.hp2 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18945.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18977.hp1 NA18977.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18992.hp1 NA18992.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19004.hp1 NA19004.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19059.hp1 NA19059.hp2 NA19064.hp1 NA19066.hp1 NA19066.hp2 NA19072.hp1 NA19072.hp2 NA19079.hp1 NA19079.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA19087.hp2 NA20300.hp1 NA20300.hp2	synonymous_variant	LOW	c.996C>T c.996C>T	p.Asp332Asp p.Asp332Asp	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1085/2415	996/1593	332/530	chr8	12137765
chr8:12137975	C C	T T	12	a0001c0002 a0001c0005 a0001c0012 others(9): Show a0001c0002 a0001c0005 a0001c0012 a0001c0013 a0001c0021 a0001c0022 a0004c0004 a0008c0008 a0009c0009 a0015c0024 a0016c0023 a0017c0026	72	HG00140.hp2 HG00438.hp2 HG00558.hp2 others(69): Show HG00140.hp2 HG00438.hp2 HG00558.hp2 HG00733.hp2 HG01071.hp2 HG01123.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01243.hp1 HG01258.hp1 HG01258.hp2 HG01516.hp1 HG01516.hp2 HG01943.hp2 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp2 HG02080.hp2 HG02129.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp2 HG02523.hp2 HG02615.hp2 HG02809.hp2 HG03017.hp2 HG03139.hp2 HG03492.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG03831.hp2 NA18939.hp2 NA18945.hp2 NA18949.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18960.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18986.hp1 NA18988.hp2 NA18992.hp2 NA18995.hp2 NA18997.hp1 NA19000.hp1 NA19004.hp2 NA19012.hp2 NA19059.hp2 NA19064.hp1 NA19066.hp2 NA19072.hp2 NA19079.hp1 NA19082.hp2 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp2 NA20300.hp2	synonymous_variant	LOW	c.786G>A c.786G>A	p.Pro262Pro p.Pro262Pro	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	875/2415	786/1593	262/530	chr8	12137975
chr8:12137999	G G	A A	2	a0007c0011 a0007c0028 a0007c0011 a0007c0028	4	HG02897.hp1 HG02965.hp2 HG03130.hp1 others(1): Show HG02897.hp1 HG02965.hp2 HG03130.hp1 HG03453.hp1	synonymous_variant	LOW	c.762C>T c.762C>T	p.Cys254Cys p.Cys254Cys	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	851/2415	762/1593	254/530	chr8	12137999
chr8:12138314	C C	T T	1	a0001c0005 a0001c0005	6	HG00733.hp2 HG01168.hp1 HG01169.hp2 others(3): Show HG00733.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01258.hp1 HG01516.hp2	synonymous_variant	LOW	c.447G>A c.447G>A	p.Leu149Leu p.Leu149Leu	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	536/2415	447/1593	149/530	chr8	12138314
chr8:12138560	C C	T T	1	a0001c0021 a0001c0021	1	HG01258.hp2 HG01258.hp2	synonymous_variant	LOW	c.201G>A c.201G>A	p.Lys67Lys p.Lys67Lys	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	290/2415	201/1593	67/530	chr8	12138560
chr8:12138743	G G	A A	1	a0001c0012 a0001c0012	3	HG00140.hp2 HG01243.hp1 HG01981.hp2 HG00140.hp2 HG01243.hp1 HG01981.hp2	synonymous_variant	LOW	c.18C>T c.18C>T	p.Leu6Leu p.Leu6Leu	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	107/2415	18/1593	6/530	chr8	12138743
chr8:12138752	G G	A A	1	a0001c0013 a0001c0013	3	NA19004.hp2 NA19072.hp2 NA19079.hp1 NA19004.hp2 NA19072.hp2 NA19079.hp1	synonymous_variant	LOW	c.9C>T c.9C>T	p.Asp3Asp p.Asp3Asp	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	98/2415	9/1593	3/530	chr8	12138752

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr8:12136462	C C	T T	1	a0001c0012t0013 a0001c0012t0013	1	HG00140.hp2 HG00140.hp2	3_prime_UTR_variant	MODIFIER	c.706G>A c.706G>A	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	706	chr8	12136462
chr8:12136523	T T	G G	19	a0001c0002t0001 a0001c0002t0008 a0001c0002t0010 others(16): Show a0001c0002t0001 a0001c0002t0008 a0001c0002t0010 a0001c0005t0001 a0001c0005t0006 a0001c0012t0001 a0001c0012t0013 a0001c0013t0001 a0001c0013t0011 a0001c0021t0001 a0001c0022t0012 a0004c0004t0001 a0004c0004t0014 a0005c0006t0001 a0008c0008t0001 a0009c0009t0001 a0015c0024t0001 a0016c0023t0001 a0017c0026t0001	78	HG00140.hp2 HG00438.hp2 HG00558.hp2 others(75): Show HG00140.hp2 HG00438.hp2 HG00558.hp2 HG00733.hp2 HG01071.hp2 HG01123.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01243.hp1 HG01258.hp1 HG01258.hp2 HG01516.hp1 HG01516.hp2 HG01943.hp2 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp2 HG02080.hp2 HG02129.hp1 HG02145.hp1 HG02258.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp2 HG02523.hp2 HG02615.hp1 HG02615.hp2 HG02809.hp2 HG02886.hp2 HG02897.hp2 HG03017.hp2 HG03139.hp2 HG03492.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG03831.hp2 NA18939.hp2 NA18945.hp2 NA18949.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18960.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18986.hp1 NA18988.hp2 NA18992.hp2 NA18995.hp2 NA18997.hp1 NA19000.hp1 NA19004.hp2 NA19012.hp2 NA19030.hp1 NA19059.hp2 NA19064.hp1 NA19066.hp2 NA19072.hp2 NA19079.hp1 NA19082.hp2 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp2 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.645A>C c.645A>C	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	645	chr8	12136523
chr8:12136529	A A	C C	1	a0001c0022t0012 a0001c0022t0012	1	NA18961.hp2 NA18961.hp2	3_prime_UTR_variant	MODIFIER	c.639T>G c.639T>G	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	639	chr8	12136529
chr8:12136530	T T	C C	36	a0001c0002t0001 a0001c0002t0008 a0001c0002t0010 others(33): Show a0001c0002t0001 a0001c0002t0008 a0001c0002t0010 a0001c0005t0001 a0001c0005t0006 a0001c0012t0001 a0001c0012t0013 a0001c0013t0001 a0001c0013t0011 a0001c0021t0001 a0001c0022t0012 a0002c0001t0002 a0002c0001t0009 a0002c0001t0015 a0002c0001t0016 a0003c0025t0004 a0004c0004t0001 a0004c0004t0014 a0005c0006t0001 a0006c0007t0004 a0006c0007t0005 a0007c0011t0004 a0007c0028t0004 a0008c0008t0001 a0009c0009t0001 a0011c0015t0002 a0012c0014t0002 a0013c0029t0002 a0015c0024t0001 a0016c0023t0001 a0017c0026t0001 a0018c0019t0002 a0019c0018t0002 a0020c0017t0002 a0021c0016t0002 a0022c0020t0002	153	HG00140.hp1 HG00140.hp2 HG00408.hp1 others(150): Show HG00140.hp1 HG00140.hp2 HG00408.hp1 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00733.hp1 HG00733.hp2 HG01071.hp1 HG01071.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01243.hp1 HG01258.hp1 HG01258.hp2 HG01516.hp1 HG01516.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02080.hp1 HG02080.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02615.hp1 HG02615.hp2 HG02647.hp1 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03130.hp1 HG03139.hp2 HG03209.hp2 HG03453.hp1 HG03492.hp2 HG03540.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG04115.hp2 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18945.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18977.hp1 NA18977.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18992.hp1 NA18992.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19004.hp1 NA19004.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19059.hp1 NA19059.hp2 NA19064.hp1 NA19066.hp1 NA19066.hp2 NA19072.hp1 NA19072.hp2 NA19079.hp1 NA19079.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA19087.hp2 NA20300.hp1 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.638A>G c.638A>G	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	638	chr8	12136530
chr8:12136532	G G	A A	1	a0004c0004t0014 a0004c0004t0014	1	HG01975.hp2 HG01975.hp2	3_prime_UTR_variant	MODIFIER	c.636C>T c.636C>T	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	636	chr8	12136532
chr8:12136720	C C	A A	1	a0001c0005t0006 a0001c0005t0006	2	HG01168.hp1 HG01169.hp2 HG01168.hp1 HG01169.hp2	3_prime_UTR_variant	MODIFIER	c.448G>T c.448G>T	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	448	chr8	12136720
chr8:12136754	C C	G G	1	a0001c0013t0011 a0001c0013t0011	1	NA19072.hp2 NA19072.hp2	3_prime_UTR_variant	MODIFIER	c.414G>C c.414G>C	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	414	chr8	12136754
chr8:12136762	G G	T T	12	a0002c0001t0002 a0002c0001t0009 a0002c0001t0015 others(9): Show a0002c0001t0002 a0002c0001t0009 a0002c0001t0015 a0002c0001t0016 a0011c0015t0002 a0012c0014t0002 a0013c0029t0002 a0018c0019t0002 a0019c0018t0002 a0020c0017t0002 a0021c0016t0002 a0022c0020t0002	65	HG00140.hp1 HG00408.hp1 HG00438.hp1 others(62): Show HG00140.hp1 HG00408.hp1 HG00438.hp1 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG01071.hp1 HG01123.hp2 HG01943.hp1 HG01975.hp1 HG02015.hp1 HG02080.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02273.hp1 HG02293.hp1 HG02300.hp1 HG02523.hp1 HG02647.hp1 HG02735.hp1 HG02922.hp1 HG03017.hp1 HG03540.hp2 HG03831.hp1 HG04115.hp2 NA18747.hp1 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18949.hp2 NA18961.hp1 NA18964.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18977.hp1 NA18977.hp2 NA18986.hp2 NA18988.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19004.hp1 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19059.hp1 NA19066.hp1 NA19072.hp1 NA19079.hp2 NA19082.hp1 NA19083.hp1 NA19087.hp1	3_prime_UTR_variant	MODIFIER	c.406C>A c.406C>A	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	406	chr8	12136762
chr8:12136912	T T	G G	1	a0002c0001t0015 a0002c0001t0015	1	HG02135.hp1 HG02135.hp1	3_prime_UTR_variant	MODIFIER	c.256A>C c.256A>C	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	256	chr8	12136912
chr8:12136926	C C	T T	19	a0001c0002t0001 a0001c0002t0008 a0001c0002t0010 others(16): Show a0001c0002t0001 a0001c0002t0008 a0001c0002t0010 a0001c0005t0001 a0001c0005t0006 a0001c0012t0001 a0001c0012t0013 a0001c0013t0001 a0001c0013t0011 a0001c0021t0001 a0001c0022t0012 a0004c0004t0001 a0004c0004t0014 a0005c0006t0001 a0008c0008t0001 a0009c0009t0001 a0015c0024t0001 a0016c0023t0001 a0017c0026t0001	78	HG00140.hp2 HG00438.hp2 HG00558.hp2 others(75): Show HG00140.hp2 HG00438.hp2 HG00558.hp2 HG00733.hp2 HG01071.hp2 HG01123.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01243.hp1 HG01258.hp1 HG01258.hp2 HG01516.hp1 HG01516.hp2 HG01943.hp2 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp2 HG02080.hp2 HG02129.hp1 HG02145.hp1 HG02258.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp2 HG02523.hp2 HG02615.hp1 HG02615.hp2 HG02809.hp2 HG02886.hp2 HG02897.hp2 HG03017.hp2 HG03139.hp2 HG03492.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG03831.hp2 NA18939.hp2 NA18945.hp2 NA18949.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18960.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18986.hp1 NA18988.hp2 NA18992.hp2 NA18995.hp2 NA18997.hp1 NA19000.hp1 NA19004.hp2 NA19012.hp2 NA19030.hp1 NA19059.hp2 NA19064.hp1 NA19066.hp2 NA19072.hp2 NA19079.hp1 NA19082.hp2 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp2 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.242G>A c.242G>A	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	242	chr8	12136926
chr8:12137071	G G	C C	1	a0002c0001t0016 a0002c0001t0016	1	HG02735.hp1 HG02735.hp1	3_prime_UTR_variant	MODIFIER	c.97C>G c.97C>G	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	97	chr8	12137071
chr8:12137090	C C	T T	1	a0001c0002t0010 a0001c0002t0010	1	NA18988.hp2 NA18988.hp2	3_prime_UTR_variant	MODIFIER	c.78G>A c.78G>A	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	78	chr8	12137090
chr8:12137167	A A	G G	1	a0002c0001t0009 a0002c0001t0009	1	NA18997.hp2 NA18997.hp2	3_prime_UTR_variant	MODIFIER	c.1T>C c.1T>C	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1	chr8	12137167
chr8:12138761	G G	A A	1	a0006c0007t0005 a0006c0007t0005	4	HG02735.hp2 HG03041.hp1 HG03209.hp2 others(1): Show HG02735.hp2 HG03041.hp1 HG03209.hp2 NA20300.hp1	5_prime_UTR_variant	MODIFIER	c.-1C>T c.-1C>T	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1	chr8	12138761
chr8:12138801	T T	C C	38	a0001c0002t0001 a0001c0002t0010 a0001c0005t0001 others(35): Show a0001c0002t0001 a0001c0002t0010 a0001c0005t0001 a0001c0005t0006 a0001c0012t0001 a0001c0012t0013 a0001c0013t0001 a0001c0013t0011 a0001c0021t0001 a0001c0022t0012 a0002c0001t0002 a0002c0001t0009 a0002c0001t0015 a0002c0001t0016 a0003c0003t0003 a0003c0025t0004 a0004c0004t0001 a0004c0004t0014 a0005c0006t0001 a0006c0007t0004 a0006c0007t0005 a0007c0011t0004 a0007c0028t0004 a0008c0008t0001 a0009c0009t0001 a0010c0010t0003 a0011c0015t0002 a0012c0014t0002 a0013c0029t0002 a0014c0027t0003 a0015c0024t0001 a0016c0023t0001 a0017c0026t0001 a0018c0019t0002 a0019c0018t0002 a0020c0017t0002 a0021c0016t0002 a0022c0020t0002	176	HG00140.hp1 HG00140.hp2 HG00408.hp1 others(173): Show HG00140.hp1 HG00140.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00733.hp1 HG00733.hp2 HG01071.hp1 HG01071.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01243.hp2 HG01258.hp1 HG01258.hp2 HG01516.hp1 HG01516.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02080.hp1 HG02080.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02615.hp1 HG02615.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp2 HG02970.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03130.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03492.hp2 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp1 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18945.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18977.hp1 NA18977.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18992.hp1 NA18992.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19004.hp1 NA19004.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19059.hp1 NA19059.hp2 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19072.hp1 NA19072.hp2 NA19079.hp1 NA19079.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA19087.hp2 NA20300.hp1 NA20300.hp2	5_prime_UTR_variant	MODIFIER	c.-41A>G c.-41A>G	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	41	chr8	12138801
chr8:12138801	T T	G G	1	a0001c0002t0008 a0001c0002t0008	1	HG03688.hp2 HG03688.hp2	5_prime_UTR_variant	MODIFIER	c.-41A>C c.-41A>C	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	41	chr8	12138801

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	genebody_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

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Translation Multiple Alignment View

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 23)

CCoding Level Haplotype Info (Total: 30)

TTranscript Level Haplotype Info (Total: 17)

GGenebody Level Haplotype Info (Total: 1)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 30)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 41)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 41)

Haplotype Details by Sample (Haploid Level) (Total: 195)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 24)

CCoding Level Variants (Synonymous Mutations) (Total: 9)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 16)

GGenebody Level Haplotype Variants (Intron) (Total: 0)

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Annotation (Repeats)

Annotation (SNP Array)