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Item	Value
geneid	377630
ensemblid	ENSG00000223443.3
hgncid	34434
symbol	USP17L2
name	ubiquitin specific peptidase 17 like family member 2
refseq_nuc	NM_201402.3
refseq_prot	NP_958804.2
ensembl_nuc	ENST00000333796.4
ensembl_prot	ENSP00000333329.3
mane_status	MANE Select
chr	chr8
start	12136435
end	12138849
strand	-
ver	v1.2
region	chr8:12136435-12138849
region5000	chr8:12131435-12143849
regionname0	USP17L2_chr8_12136435_12138849
regionname5000	USP17L2_chr8_12131435_12143849

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/0	530	179	30	34	94	4	16	75	USP17L2_chr8_12131435_12143849	USP17L2	MEDDS others(525): Show MEDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSEARVD LCDDLAPVARQLAPRKKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTY TPPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALA AGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGC WRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGEN AYHCGLCLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPEC LDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMD DAKVTACSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTD RRATQGELKRDHPCLQAPELDERLVERATQESTLDHWKFPQEQNKTKPEF NVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESV NTGTLASLQGRTRRSKGKNKHSKRALLVCQ	chr8	12131435	12143849
a0002	0/0	0	16	12	0	2	0	2	1	USP17L2_chr8_12131435_12143849	USP17L2		chr8	12131435	12143849

achapid	grch38/ chm13v2	alen	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	aseq	cseq	chr	start	end
a0001c0001	1/0		1590	179	30	34	94	4	16	USP17L2_chr8_12131435_12143849	USP17L2		ATGGA others(1585): Show ATGGAGGACGACTCACTCTACTTGGGAGGTGAGTGGCAGTTCAACCACTT TTCAAAACTCACATCTTCTCGGCCAGATGCAGCTTTTGCTGAAATCCAGC GGACTTCTCTCCCTGAGAAGTCACCACTCTCATCTGAGGCCCGTGTCGAC CTCTGTGATGATTTGGCTCCTGTGGCAAGACAGCTTGCTCCCAGGAAGAA GCTTCCTCTGAGTAGCAGGAGACCTGCTGCGGTGGGGGCTGGGCTCCAGA ATATGGGAAATACCTGCTACGAGAACGCTTCCCTGCAGTGCCTGACATAC ACACCGCCCCTTGCCAACTACATGCTGTCCCGGGAGCACTCTCAAACATG TCAGCGTCCCAAGTGCTGCATGCTCTGTACTATGCAAGCTCACATCACAT GGGCCCTCCACAGTCCTGGTCATGTCATCCAGCCCTCACAGGCATTGGCT GCTGGCTTCCATAGAGGCAAGCAGGAAGATGCCCATGAATTTCTCATGTT CACTGTGGATGCCATGAAAAAGGCATGCCTTCCCGGCCACAAGCAGGTAG ATCATCACTCTAAGGACACCACCCTCATCCACCAAATATTTGGAGGCTGC TGGAGATCTCAAATCAAGTGTCTCCACTGCCACGGGATTTCAGACACTTT TGACCCTTACCTGGACATCGCCCTGGATATCCAGGCAGCTCAGAGTGTCA AGCAAGCTTTGGAACAGTTGGTGAAGCCCGAAGAACTCAATGGAGAGAAT GCCTATCATTGCGGTCTTTGTCTCCAGAGGGCGCCGGCCTCCAAGACGTT AACTTTACACACTTCTGCCAAGGTCCTCATCCTTGTCTTGAAGAGATTCT CCGATGTCACAGGCAACAAACTTGCCAAGAATGTGCAATATCCTGAGTGC CTTGACATGCAGCCATACATGTCTCAGCAGAACACAGGACCTCTTGTCTA TGTCCTCTATGCTGTGCTGGTCCACGCTGGGTGGAGTTGTCACGACGGAC ATTACTTCTCTTATGTCAAAGCTCAAGAAGGCCAGTGGTATAAAATGGAT GATGCCAAGGTCACTGCCTGTAGCATCACTTCTGTCCTGAGTCAACAGGC CTATGTCCTCTTTTACATCCAGAAGAGTGAATGGGAAAGACACAGTGAGA GTGTGTCAAGAGGCAGGGAACCAAGAGCCCTCGGCGCTGAAGACACAGAC AGGCGAGCAACGCAAGGAGAGCTCAAGAGAGACCACCCCTGCCTCCAGGC ACCCGAGTTGGACGAGCGCTTGGTGGAAAGAGCCACTCAGGAAAGCACCT TAGACCACTGGAAATTCCCCCAAGAGCAAAACAAAACGAAGCCTGAGTTC AACGTCAGAAAAGTCGAAGGTACCCTGCCTCCCAACGTACTTGTGATTCA TCAATCGAAATACAAGTGTGGGATGAAAAACCATCATCCTGAACAGCAAA GCTCCCTGCTAAACCTCTCTTCGACGACCCGGACAGATCAGGAGTCCGTG AACACTGGCACCCTCGCTTCTCTGCAAGGGAGGACCAGGAGATCCAAAGG GAAGAACAAACACAGCAAGAGGGCTCTGCTTGTGTGCCAG	chr8	12131435	12143849
a0002c0000	0/0		0	16	12	0	2	0	2	USP17L2_chr8_12131435_12143849	USP17L2			chr8	12131435	12143849

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/0	2415	179	30	34	94	4	16	USP17L2_chr8_12131435_12143849	USP17L2	GTCAT others(2410): Show GTCATTTGAAGACTCTCTTGGAAGAGATAGCGTCTTGCTGCAACCTGCAG TCCCAGCAGAAAAACCTTGTGATCCTTGTTGCGGGCGACATGGAGGACGA CTCACTCTACTTGGGAGGTGAGTGGCAGTTCAACCACTTTTCAAAACTCA CATCTTCTCGGCCAGATGCAGCTTTTGCTGAAATCCAGCGGACTTCTCTC CCTGAGAAGTCACCACTCTCATCTGAGGCCCGTGTCGACCTCTGTGATGA TTTGGCTCCTGTGGCAAGACAGCTTGCTCCCAGGAAGAAGCTTCCTCTGA GTAGCAGGAGACCTGCTGCGGTGGGGGCTGGGCTCCAGAATATGGGAAAT ACCTGCTACGAGAACGCTTCCCTGCAGTGCCTGACATACACACCGCCCCT TGCCAACTACATGCTGTCCCGGGAGCACTCTCAAACATGTCAGCGTCCCA AGTGCTGCATGCTCTGTACTATGCAAGCTCACATCACATGGGCCCTCCAC AGTCCTGGTCATGTCATCCAGCCCTCACAGGCATTGGCTGCTGGCTTCCA TAGAGGCAAGCAGGAAGATGCCCATGAATTTCTCATGTTCACTGTGGATG CCATGAAAAAGGCATGCCTTCCCGGCCACAAGCAGGTAGATCATCACTCT AAGGACACCACCCTCATCCACCAAATATTTGGAGGCTGCTGGAGATCTCA AATCAAGTGTCTCCACTGCCACGGGATTTCAGACACTTTTGACCCTTACC TGGACATCGCCCTGGATATCCAGGCAGCTCAGAGTGTCAAGCAAGCTTTG GAACAGTTGGTGAAGCCCGAAGAACTCAATGGAGAGAATGCCTATCATTG CGGTCTTTGTCTCCAGAGGGCGCCGGCCTCCAAGACGTTAACTTTACACA CTTCTGCCAAGGTCCTCATCCTTGTCTTGAAGAGATTCTCCGATGTCACA GGCAACAAACTTGCCAAGAATGTGCAATATCCTGAGTGCCTTGACATGCA GCCATACATGTCTCAGCAGAACACAGGACCTCTTGTCTATGTCCTCTATG CTGTGCTGGTCCACGCTGGGTGGAGTTGTCACGACGGACATTACTTCTCT TATGTCAAAGCTCAAGAAGGCCAGTGGTATAAAATGGATGATGCCAAGGT CACTGCCTGTAGCATCACTTCTGTCCTGAGTCAACAGGCCTATGTCCTCT TTTACATCCAGAAGAGTGAATGGGAAAGACACAGTGAGAGTGTGTCAAGA GGCAGGGAACCAAGAGCCCTCGGCGCTGAAGACACAGACAGGCGAGCAAC GCAAGGAGAGCTCAAGAGAGACCACCCCTGCCTCCAGGCACCCGAGTTGG ACGAGCGCTTGGTGGAAAGAGCCACTCAGGAAAGCACCTTAGACCACTGG AAATTCCCCCAAGAGCAAAACAAAACGAAGCCTGAGTTCAACGTCAGAAA AGTCGAAGGTACCCTGCCTCCCAACGTACTTGTGATTCATCAATCGAAAT ACAAGTGTGGGATGAAAAACCATCATCCTGAACAGCAAAGCTCCCTGCTA AACCTCTCTTCGACGACCCGGACAGATCAGGAGTCCGTGAACACTGGCAC CCTCGCTTCTCTGCAAGGGAGGACCAGGAGATCCAAAGGGAAGAACAAAC ACAGCAAGAGGGCTCTGCTTGTGTGCCAGTGATCTCAGTGGAAGTGCCGA CCCACACGTAGGGGTGAACGCACACACACACACGCACAAATACACCCACA AGCGCGCACGCAAACACACACACACACACAAACACGAACACCGTCAATCC TACATAAAGTAATGAGGAGTCCAAGTTTCTGTCTCTACAACAGGGACAAC TGGATAGTGATGGCTGCATCTCAGGATGAGCCCACACATGGGAAACATCA AGTTTTGGGGTCGTGAGTCTTCCGAACCTCTGGAGAGACTGTCTGTGTGT TTGTGTTCATGGTAGATGACATTCACTGTGTATTTCTGAATATGACCTAC TGACGTGTAGGTTTGAGTGTGAGGTTATTGCAGGGGACTCGGTTTCCTAT TTTCTCTTGGGGTGTGTTTCATTCGTCAGTTGTTGGGCGGCACGAGAAGG TGAAATTTTGCTCATGTGGCACATCCATGGATCATTCTCGCCACCTTGAA TAGTGGAAACTGGAATGCATTTAGAAGATAGGAACGGTGCTCTTCTTTCT TACCCTGGCTCACCGTTTTTACATTGGTTTCTGAATGGACCTCAGGCGCC CTGGGACTTGTGCTCTTGCTGGAACCCACATAACGCCGGAAACAGACAGA CCGACTTGCCTGTTTCACGATGTCCAATTCCAATGAGTCGAAATGGAAAA TTTTCCCACTGGCATGTCAGTCATTTGGAAATAAGTCGTATTGATAATAA AGGAAATCAAACACA	chr8	12131435	12143849
a0002c0000t0000	0/0	0	16	12	0	2	0	2	USP17L2_chr8_12131435_12143849	USP17L2		chr8	12131435	12143849

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0000	1/0	179	30	34	94	4	16	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
a0002c0000t0000g0000	0/0	16	12	0	2	0	2	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00140	hp1	a0001	c0001	t0001	g0000	EUR	GBR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00140	hp2	a0001	c0001	t0001	g0000	EUR	GBR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00408	hp1	a0001	c0001	t0001	g0000	EAS	CHS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00408	hp2	a0001	c0001	t0001	g0000	EAS	CHS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00438	hp1	a0001	c0001	t0001	g0000	EAS	CHS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00438	hp2	a0001	c0001	t0001	g0000	EAS	CHS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00558	hp1	a0001	c0001	t0001	g0000	EAS	CHS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00558	hp2	a0001	c0001	t0001	g0000	EAS	CHS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00597	hp1	a0001	c0001	t0001	g0000	EAS	CHS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00597	hp2	a0001	c0001	t0001	g0000	EAS	CHS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00733	hp1	a0001	c0001	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG00733	hp2	a0001	c0001	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01071	hp1	a0001	c0001	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01071	hp2	a0001	c0001	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01167	hp1	a0001	c0001	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01167	hp2	a0001	c0001	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01168	hp1	a0001	c0001	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01168	hp2	a0001	c0001	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01169	hp1	a0001	c0001	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01169	hp2	a0001	c0001	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01175	hp1	a0001	c0001	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01175	hp2	a0001	c0001	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01243	hp1	a0001	c0001	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01243	hp2	a0001	c0001	t0001	g0000	AMR	PUR	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01258	hp1	a0001	c0001	t0001	g0000	AMR	CLM	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01258	hp2	a0001	c0001	t0001	g0000	AMR	CLM	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01516	hp1	a0001	c0001	t0001	g0000	EUR	IBS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01516	hp2	a0001	c0001	t0001	g0000	EUR	IBS	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01943	hp1	a0001	c0001	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01943	hp2	a0001	c0001	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01975	hp1	a0001	c0001	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01975	hp2	a0001	c0001	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01978	hp1	a0001	c0001	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01978	hp2	a0001	c0001	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01981	hp1	a0001	c0001	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01981	hp2	a0001	c0001	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01993	hp1	a0001	c0001	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01993	hp2	a0001	c0001	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02015	hp1	a0001	c0001	t0001	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02015	hp2	a0001	c0001	t0001	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02080	hp1	a0001	c0001	t0001	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02080	hp2	a0001	c0001	t0001	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02129	hp1	a0001	c0001	t0001	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02129	hp2	a0001	c0001	t0001	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02135	hp1	a0001	c0001	t0001	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02135	hp2	a0001	c0001	t0001	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02145	hp1	a0001	c0001	t0001	g0000	AFR	ACB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02145	hp2	a0002	c0000	t0000	g0000	AFR	ACB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02258	hp1	a0001	c0001	t0001	g0000	AFR	ACB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02258	hp2	a0001	c0001	t0001	g0000	AFR	ACB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02273	hp1	a0001	c0001	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02273	hp2	a0001	c0001	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02293	hp1	a0001	c0001	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02293	hp2	a0001	c0001	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02300	hp1	a0001	c0001	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02300	hp2	a0001	c0001	t0001	g0000	AMR	PEL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02523	hp1	a0001	c0001	t0001	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02523	hp2	a0001	c0001	t0001	g0000	EAS	KHV	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02615	hp1	a0001	c0001	t0001	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02615	hp2	a0001	c0001	t0001	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02647	hp1	a0001	c0001	t0001	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02647	hp2	a0001	c0001	t0001	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02717	hp1	a0001	c0001	t0001	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02717	hp2	a0002	c0000	t0000	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02735	hp1	a0001	c0001	t0001	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02735	hp2	a0001	c0001	t0001	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02809	hp1	a0001	c0001	t0001	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02809	hp2	a0001	c0001	t0001	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02886	hp1	a0001	c0001	t0001	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02886	hp2	a0001	c0001	t0001	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02897	hp1	a0001	c0001	t0001	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02897	hp2	a0001	c0001	t0001	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02922	hp1	a0001	c0001	t0001	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02922	hp2	a0002	c0000	t0000	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02965	hp1	a0002	c0000	t0000	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02965	hp2	a0001	c0001	t0001	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02970	hp1	a0002	c0000	t0000	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02970	hp2	a0001	c0001	t0001	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03017	hp1	a0001	c0001	t0001	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03017	hp2	a0001	c0001	t0001	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03041	hp1	a0001	c0001	t0001	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03041	hp2	a0002	c0000	t0000	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03130	hp1	a0001	c0001	t0001	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03130	hp2	a0002	c0000	t0000	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03139	hp1	a0002	c0000	t0000	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03139	hp2	a0001	c0001	t0001	g0000	AFR	ESN	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03209	hp1	a0002	c0000	t0000	g0000	AFR	MSL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03209	hp2	a0001	c0001	t0001	g0000	AFR	MSL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03225	hp1	a0001	c0001	t0001	g0000	AFR	MSL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03225	hp2	a0001	c0001	t0001	g0000	AFR	MSL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03453	hp1	a0001	c0001	t0001	g0000	AFR	MSL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03453	hp2	a0002	c0000	t0000	g0000	AFR	MSL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03492	hp1	a0002	c0000	t0000	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03492	hp2	a0001	c0001	t0001	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03540	hp1	a0002	c0000	t0000	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03540	hp2	a0001	c0001	t0001	g0000	AFR	GWD	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03688	hp1	a0002	c0000	t0000	g0000	SAS	STU	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03688	hp2	a0001	c0001	t0001	g0000	SAS	STU	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03704	hp1	a0001	c0001	t0001	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03704	hp2	a0001	c0001	t0001	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03710	hp1	a0001	c0001	t0001	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03710	hp2	a0001	c0001	t0001	g0000	SAS	PJL	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03831	hp1	a0001	c0001	t0001	g0000	SAS	BEB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG03831	hp2	a0001	c0001	t0001	g0000	SAS	BEB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG04115	hp1	a0001	c0001	t0001	g0000	SAS	STU	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG04115	hp2	a0001	c0001	t0001	g0000	SAS	STU	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG04199	hp1	a0001	c0001	t0001	g0000	SAS	STU	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG04199	hp2	a0001	c0001	t0001	g0000	SAS	STU	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18747	hp1	a0001	c0001	t0001	g0000	EAS	CHB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18747	hp2	a0002	c0000	t0000	g0000	EAS	CHB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18939	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18939	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18940	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18940	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18943	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18943	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18945	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18945	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18949	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18949	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18950	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18950	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18951	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18951	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18960	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18960	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18961	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18961	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18963	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18963	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18964	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18964	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18966	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18966	hp2	a0002	c0000	t0000	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18968	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18968	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18969	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18969	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18970	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18970	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18977	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18977	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18986	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18986	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18988	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18988	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18992	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18992	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18995	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18995	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18997	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18997	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18998	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA18998	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19000	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19000	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19004	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19004	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19006	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19006	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19007	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19007	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19009	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19009	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19010	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19010	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19012	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19012	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19030	hp1	a0001	c0001	t0001	g0000	AFR	LWK	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19030	hp2	a0001	c0001	t0001	g0000	AFR	LWK	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19059	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19059	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19064	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19064	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19066	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19066	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19072	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19072	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19079	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19079	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19082	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19082	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19083	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19083	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19084	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19084	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19087	hp1	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA19087	hp2	a0001	c0001	t0001	g0000	EAS	JPT	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01123	hp1	a0001	c0001	t0001	g0000	AMR	CLM	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG01123	hp2	a0001	c0001	t0001	g0000	AMR	CLM	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02109	hp1	a0002	c0000	t0000	g0000	AFR	ACB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
HG02109	hp2	a0001	c0001	t0001	g0000	AFR	ACB	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA20300	hp1	a0001	c0001	t0001	g0000	AFR	USA	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
NA20300	hp2	a0001	c0001	t0001	g0000	AFR	USA	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849
homoSapiens	grch38p0	a0001	c0001	t0001	g0000	REF	REF	USP17L2_chr8_12131435_12143849	USP17L2	chr8	12131435	12143849

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr8:12137195	G G	T T	1	a0001 a0001	1	NA18964.hp2 NA18964.hp2	missense_variant	MODERATE	c.1566C>A c.1566C>A	p.Ser522Arg p.Ser522Arg	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1655/2415	1566/1593	522/530	chr8	12137195
chr8:12137211	C C	T T	1	a0001 a0001	1	NA19084.hp2 NA19084.hp2	missense_variant	MODERATE	c.1550G>A c.1550G>A	p.Gly517Glu p.Gly517Glu	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1639/2415	1550/1593	517/530	chr8	12137211
chr8:12137400	T T	A A	1	a0001 a0001	1	NA18992.hp1 NA18992.hp1	missense_variant	MODERATE	c.1361A>T c.1361A>T	p.Lys454Ile p.Lys454Ile	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1450/2415	1361/1593	454/530	chr8	12137400
chr8:12137448	T T	C C	1	a0001 a0001	78	HG00140.hp2 HG00438.hp2 HG00558.hp2 others(75): Show HG00140.hp2 HG00438.hp2 HG00558.hp2 HG00733.hp2 HG01071.hp2 HG01123.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01243.hp1 HG01258.hp1 HG01258.hp2 HG01516.hp1 HG01516.hp2 HG01943.hp2 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp2 HG02080.hp2 HG02129.hp1 HG02145.hp1 HG02258.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp2 HG02523.hp2 HG02615.hp1 HG02615.hp2 HG02809.hp2 HG02886.hp2 HG02897.hp2 HG03017.hp2 HG03139.hp2 HG03492.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG03831.hp2 NA18939.hp2 NA18945.hp2 NA18949.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18960.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18986.hp1 NA18988.hp2 NA18992.hp2 NA18995.hp2 NA18997.hp1 NA19000.hp1 NA19004.hp2 NA19012.hp2 NA19030.hp1 NA19059.hp2 NA19064.hp1 NA19066.hp2 NA19072.hp2 NA19079.hp1 NA19082.hp2 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp2 NA20300.hp2	missense_variant	MODERATE	c.1313A>G c.1313A>G	p.Lys438Arg p.Lys438Arg	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1402/2415	1313/1593	438/530	chr8	12137448
chr8:12137494	G G	A A	1	a0001 a0001	1	NA18939.hp2 NA18939.hp2	missense_variant	MODERATE	c.1267C>T c.1267C>T	p.Arg423Cys p.Arg423Cys	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1356/2415	1267/1593	423/530	chr8	12137494
chr8:12137525	G G	T T	1	a0001 a0001	1	NA18939.hp1 NA18939.hp1	missense_variant	MODERATE	c.1236C>A c.1236C>A	p.His412Gln p.His412Gln	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1325/2415	1236/1593	412/530	chr8	12137525
chr8:12137553	G G	A A	1	a0001 a0001	64	HG00140.hp1 HG00408.hp1 HG00438.hp1 others(61): Show HG00140.hp1 HG00408.hp1 HG00438.hp1 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG01071.hp1 HG01123.hp2 HG01943.hp1 HG01975.hp1 HG02015.hp1 HG02080.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02273.hp1 HG02293.hp1 HG02300.hp1 HG02523.hp1 HG02647.hp1 HG02735.hp1 HG03017.hp1 HG03540.hp2 HG03831.hp1 HG04115.hp2 NA18747.hp1 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18949.hp2 NA18961.hp1 NA18964.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18977.hp1 NA18977.hp2 NA18986.hp2 NA18988.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19004.hp1 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19059.hp1 NA19066.hp1 NA19072.hp1 NA19079.hp2 NA19082.hp1 NA19083.hp1 NA19087.hp1	missense_variant	MODERATE	c.1208C>T c.1208C>T	p.Ala403Val p.Ala403Val	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1297/2415	1208/1593	403/530	chr8	12137553
chr8:12137577	C C	T T	1	a0001 a0001	2	NA19004.hp1 NA19072.hp1 NA19004.hp1 NA19072.hp1	missense_variant	MODERATE	c.1184G>A c.1184G>A	p.Gly395Asp p.Gly395Asp	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1273/2415	1184/1593	395/530	chr8	12137577
chr8:12137578	C C	T T	1	a0001 a0001	6	HG02145.hp1 HG02258.hp1 HG02615.hp1 others(3): Show HG02145.hp1 HG02258.hp1 HG02615.hp1 HG02886.hp2 HG02897.hp2 NA19030.hp1	missense_variant	MODERATE	c.1183G>A c.1183G>A	p.Gly395Ser p.Gly395Ser	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1272/2415	1183/1593	395/530	chr8	12137578
chr8:12137613	T T	C C	1	a0001 a0001	1	HG02129.hp1 HG02129.hp1	missense_variant	MODERATE	c.1148A>G c.1148A>G	p.Glu383Gly p.Glu383Gly	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1237/2415	1148/1593	383/530	chr8	12137613
chr8:12137739	G G	A A	1	a0001 a0001	3	HG01123.hp1 HG03017.hp2 HG03704.hp2 HG01123.hp1 HG03017.hp2 HG03704.hp2	missense_variant	MODERATE	c.1022C>T c.1022C>T	p.Ala341Val p.Ala341Val	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1111/2415	1022/1593	341/530	chr8	12137739
chr8:12137767	C C	T T	1	a0001 a0001	4	HG02897.hp1 HG02965.hp2 HG03130.hp1 others(1): Show HG02897.hp1 HG02965.hp2 HG03130.hp1 HG03453.hp1	missense_variant	MODERATE	c.994G>A c.994G>A	p.Asp332Asn p.Asp332Asn	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1083/2415	994/1593	332/530	chr8	12137767
chr8:12137966	C C	G G	1	a0001 a0001	4	HG02109.hp2 HG02647.hp2 HG02717.hp1 others(1): Show HG02109.hp2 HG02647.hp2 HG02717.hp1 HG03225.hp1	missense_variant	MODERATE	c.795G>C c.795G>C	p.Lys265Asn p.Lys265Asn	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	884/2415	795/1593	265/530	chr8	12137966
chr8:12138031	C C	T T	1	a0001 a0001	62	HG00140.hp1 HG00408.hp1 HG00438.hp1 others(59): Show HG00140.hp1 HG00408.hp1 HG00438.hp1 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG01071.hp1 HG01123.hp2 HG01943.hp1 HG01975.hp1 HG02015.hp1 HG02080.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02273.hp1 HG02293.hp1 HG02300.hp1 HG02523.hp1 HG02735.hp1 HG03017.hp1 HG03831.hp1 HG04115.hp2 NA18747.hp1 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18949.hp2 NA18961.hp1 NA18964.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18977.hp1 NA18977.hp2 NA18986.hp2 NA18988.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19004.hp1 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19059.hp1 NA19066.hp1 NA19072.hp1 NA19079.hp2 NA19082.hp1 NA19083.hp1 NA19087.hp1	missense_variant	MODERATE	c.730G>A c.730G>A	p.Glu244Lys p.Glu244Lys	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	819/2415	730/1593	244/530	chr8	12138031
chr8:12138121	A A	G G	1	a0001 a0001	4	HG02897.hp1 HG02965.hp2 HG03130.hp1 others(1): Show HG02897.hp1 HG02965.hp2 HG03130.hp1 HG03453.hp1	missense_variant	MODERATE	c.640T>C c.640T>C	p.Ser214Pro p.Ser214Pro	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	729/2415	640/1593	214/530	chr8	12138121
chr8:12138233	G G	C C	1	a0001 a0001	3	HG02523.hp2 NA18950.hp2 NA18968.hp1 HG02523.hp2 NA18950.hp2 NA18968.hp1	missense_variant	MODERATE	c.528C>G c.528C>G	p.Cys176Trp p.Cys176Trp	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	617/2415	528/1593	176/530	chr8	12138233
chr8:12138276	T T	A A	1	a0001 a0001	5	HG00733.hp1 HG02735.hp2 HG03041.hp1 others(2): Show HG00733.hp1 HG02735.hp2 HG03041.hp1 HG03209.hp2 NA20300.hp1	missense_variant	MODERATE	c.485A>T c.485A>T	p.His162Leu p.His162Leu	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	574/2415	485/1593	162/530	chr8	12138276
chr8:12138430	G G	A A	1	a0001 a0001	1	HG02129.hp1 HG02129.hp1	missense_variant	MODERATE	c.331C>T c.331C>T	p.Arg111Trp p.Arg111Trp	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	420/2415	331/1593	111/530	chr8	12138430
chr8:12138517	G G	A A	1	a0001 a0001	1	HG02109.hp2 HG02109.hp2	missense_variant	MODERATE	c.244C>T c.244C>T	p.Leu82Phe p.Leu82Phe	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	333/2415	244/1593	82/530	chr8	12138517
chr8:12138565	T T	C C	1	a0001 a0001	4	HG02897.hp1 HG02965.hp2 HG03130.hp1 others(1): Show HG02897.hp1 HG02965.hp2 HG03130.hp1 HG03453.hp1	missense_variant	MODERATE	c.196A>G c.196A>G	p.Lys66Glu p.Lys66Glu	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	285/2415	196/1593	66/530	chr8	12138565
chr8:12138577	G G	A A	1	a0001 a0001	65	HG00140.hp1 HG00408.hp1 HG00438.hp1 others(62): Show HG00140.hp1 HG00408.hp1 HG00438.hp1 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG01071.hp1 HG01123.hp2 HG01943.hp1 HG01975.hp1 HG02015.hp1 HG02080.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02273.hp1 HG02293.hp1 HG02300.hp1 HG02523.hp1 HG02647.hp1 HG02735.hp1 HG02922.hp1 HG03017.hp1 HG03540.hp2 HG03831.hp1 HG04115.hp2 NA18747.hp1 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18949.hp2 NA18961.hp1 NA18964.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18977.hp1 NA18977.hp2 NA18986.hp2 NA18988.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19004.hp1 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19059.hp1 NA19066.hp1 NA19072.hp1 NA19079.hp2 NA19082.hp1 NA19083.hp1 NA19087.hp1	missense_variant	MODERATE	c.184C>T c.184C>T	p.Leu62Phe p.Leu62Phe	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	273/2415	184/1593	62/530	chr8	12138577
chr8:12138578	C C	G G	1	a0001 a0001	11	HG01975.hp2 HG02523.hp2 NA18945.hp2 others(8): Show HG01975.hp2 HG02523.hp2 NA18945.hp2 NA18950.hp2 NA18960.hp1 NA18964.hp1 NA18968.hp1 NA18997.hp1 NA19012.hp2 NA19064.hp1 NA19066.hp2	missense_variant	MODERATE	c.183G>C c.183G>C	p.Gln61His p.Gln61His	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	272/2415	183/1593	61/530	chr8	12138578
chr8:12138603	T T	C C	1	a0001 a0001	1	NA18949.hp2 NA18949.hp2	missense_variant	MODERATE	c.158A>G c.158A>G	p.Asp53Gly p.Asp53Gly	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	247/2415	158/1593	53/530	chr8	12138603
chr8:12138641	C C	G G	1	a0001 a0001	64	HG00140.hp1 HG00408.hp1 HG00438.hp1 others(61): Show HG00140.hp1 HG00408.hp1 HG00438.hp1 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG01071.hp1 HG01123.hp2 HG01943.hp1 HG01975.hp1 HG02015.hp1 HG02080.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02273.hp1 HG02293.hp1 HG02300.hp1 HG02523.hp1 HG02647.hp1 HG02735.hp1 HG02922.hp1 HG03017.hp1 HG03540.hp2 HG03831.hp1 HG04115.hp2 NA18747.hp1 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18949.hp2 NA18961.hp1 NA18964.hp2 NA18969.hp1 NA18969.hp2 NA18977.hp1 NA18977.hp2 NA18986.hp2 NA18988.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19004.hp1 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19059.hp1 NA19066.hp1 NA19072.hp1 NA19079.hp2 NA19082.hp1 NA19083.hp1 NA19087.hp1	missense_variant	MODERATE	c.120G>C c.120G>C	p.Lys40Asn p.Lys40Asn	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	209/2415	120/1593	40/530	chr8	12138641

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr8:12137354	C C	T T	1	a0001c0001 a0001c0001	1	NA18961.hp2 NA18961.hp2	synonymous_variant	LOW	c.1407G>A c.1407G>A	p.Ser469Ser p.Ser469Ser	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1496/2415	1407/1593	469/530	chr8	12137354
chr8:12137507	G G	A A	1	a0001c0001 a0001c0001	3	HG02897.hp1 HG02965.hp2 HG03130.hp1 HG02897.hp1 HG02965.hp2 HG03130.hp1	synonymous_variant	LOW	c.1254C>T c.1254C>T	p.Pro418Pro p.Pro418Pro	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1343/2415	1254/1593	418/530	chr8	12137507
chr8:12137765	G G	A A	1	a0001c0001 a0001c0001	149	HG00140.hp1 HG00140.hp2 HG00408.hp1 others(146): Show HG00140.hp1 HG00140.hp2 HG00408.hp1 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00733.hp1 HG00733.hp2 HG01071.hp1 HG01071.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01243.hp1 HG01258.hp1 HG01258.hp2 HG01516.hp1 HG01516.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02080.hp1 HG02080.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02615.hp1 HG02615.hp2 HG02647.hp1 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02897.hp2 HG02922.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03139.hp2 HG03209.hp2 HG03492.hp2 HG03540.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG04115.hp2 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18945.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18977.hp1 NA18977.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18992.hp1 NA18992.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19004.hp1 NA19004.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19059.hp1 NA19059.hp2 NA19064.hp1 NA19066.hp1 NA19066.hp2 NA19072.hp1 NA19072.hp2 NA19079.hp1 NA19079.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA19087.hp2 NA20300.hp1 NA20300.hp2	synonymous_variant	LOW	c.996C>T c.996C>T	p.Asp332Asp p.Asp332Asp	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1085/2415	996/1593	332/530	chr8	12137765
chr8:12137975	C C	T T	1	a0001c0001 a0001c0001	72	HG00140.hp2 HG00438.hp2 HG00558.hp2 others(69): Show HG00140.hp2 HG00438.hp2 HG00558.hp2 HG00733.hp2 HG01071.hp2 HG01123.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01243.hp1 HG01258.hp1 HG01258.hp2 HG01516.hp1 HG01516.hp2 HG01943.hp2 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp2 HG02080.hp2 HG02129.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp2 HG02523.hp2 HG02615.hp2 HG02809.hp2 HG03017.hp2 HG03139.hp2 HG03492.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG03831.hp2 NA18939.hp2 NA18945.hp2 NA18949.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18960.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18986.hp1 NA18988.hp2 NA18992.hp2 NA18995.hp2 NA18997.hp1 NA19000.hp1 NA19004.hp2 NA19012.hp2 NA19059.hp2 NA19064.hp1 NA19066.hp2 NA19072.hp2 NA19079.hp1 NA19082.hp2 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp2 NA20300.hp2	synonymous_variant	LOW	c.786G>A c.786G>A	p.Pro262Pro p.Pro262Pro	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	875/2415	786/1593	262/530	chr8	12137975
chr8:12137999	G G	A A	1	a0001c0001 a0001c0001	4	HG02897.hp1 HG02965.hp2 HG03130.hp1 others(1): Show HG02897.hp1 HG02965.hp2 HG03130.hp1 HG03453.hp1	synonymous_variant	LOW	c.762C>T c.762C>T	p.Cys254Cys p.Cys254Cys	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	851/2415	762/1593	254/530	chr8	12137999
chr8:12138314	C C	T T	1	a0001c0001 a0001c0001	6	HG00733.hp2 HG01168.hp1 HG01169.hp2 others(3): Show HG00733.hp2 HG01168.hp1 HG01169.hp2 HG01175.hp2 HG01258.hp1 HG01516.hp2	synonymous_variant	LOW	c.447G>A c.447G>A	p.Leu149Leu p.Leu149Leu	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	536/2415	447/1593	149/530	chr8	12138314
chr8:12138560	C C	T T	1	a0001c0001 a0001c0001	1	HG01258.hp2 HG01258.hp2	synonymous_variant	LOW	c.201G>A c.201G>A	p.Lys67Lys p.Lys67Lys	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	290/2415	201/1593	67/530	chr8	12138560
chr8:12138743	G G	A A	1	a0001c0001 a0001c0001	3	HG00140.hp2 HG01243.hp1 HG01981.hp2 HG00140.hp2 HG01243.hp1 HG01981.hp2	synonymous_variant	LOW	c.18C>T c.18C>T	p.Leu6Leu p.Leu6Leu	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	107/2415	18/1593	6/530	chr8	12138743
chr8:12138752	G G	A A	1	a0001c0001 a0001c0001	3	NA19004.hp2 NA19072.hp2 NA19079.hp1 NA19004.hp2 NA19072.hp2 NA19079.hp1	synonymous_variant	LOW	c.9C>T c.9C>T	p.Asp3Asp p.Asp3Asp	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	98/2415	9/1593	3/530	chr8	12138752

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr8:12136462	C C	T T	1	a0001c0001t0001 a0001c0001t0001	1	HG00140.hp2 HG00140.hp2	3_prime_UTR_variant	MODIFIER	c.706G>A c.706G>A	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	706	chr8	12136462
chr8:12136523	T T	G G	1	a0001c0001t0001 a0001c0001t0001	78	HG00140.hp2 HG00438.hp2 HG00558.hp2 others(75): Show HG00140.hp2 HG00438.hp2 HG00558.hp2 HG00733.hp2 HG01071.hp2 HG01123.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01243.hp1 HG01258.hp1 HG01258.hp2 HG01516.hp1 HG01516.hp2 HG01943.hp2 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp2 HG02080.hp2 HG02129.hp1 HG02145.hp1 HG02258.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp2 HG02523.hp2 HG02615.hp1 HG02615.hp2 HG02809.hp2 HG02886.hp2 HG02897.hp2 HG03017.hp2 HG03139.hp2 HG03492.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG03831.hp2 NA18939.hp2 NA18945.hp2 NA18949.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18960.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18986.hp1 NA18988.hp2 NA18992.hp2 NA18995.hp2 NA18997.hp1 NA19000.hp1 NA19004.hp2 NA19012.hp2 NA19030.hp1 NA19059.hp2 NA19064.hp1 NA19066.hp2 NA19072.hp2 NA19079.hp1 NA19082.hp2 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp2 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.645A>C c.645A>C	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	645	chr8	12136523
chr8:12136529	A A	C C	1	a0001c0001t0001 a0001c0001t0001	1	NA18961.hp2 NA18961.hp2	3_prime_UTR_variant	MODIFIER	c.639T>G c.639T>G	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	639	chr8	12136529
chr8:12136530	T T	C C	1	a0001c0001t0001 a0001c0001t0001	153	HG00140.hp1 HG00140.hp2 HG00408.hp1 others(150): Show HG00140.hp1 HG00140.hp2 HG00408.hp1 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00733.hp1 HG00733.hp2 HG01071.hp1 HG01071.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01243.hp1 HG01258.hp1 HG01258.hp2 HG01516.hp1 HG01516.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02080.hp1 HG02080.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02615.hp1 HG02615.hp2 HG02647.hp1 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03130.hp1 HG03139.hp2 HG03209.hp2 HG03453.hp1 HG03492.hp2 HG03540.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG04115.hp2 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18945.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18977.hp1 NA18977.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18992.hp1 NA18992.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19004.hp1 NA19004.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19059.hp1 NA19059.hp2 NA19064.hp1 NA19066.hp1 NA19066.hp2 NA19072.hp1 NA19072.hp2 NA19079.hp1 NA19079.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA19087.hp2 NA20300.hp1 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.638A>G c.638A>G	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	638	chr8	12136530
chr8:12136532	G G	A A	1	a0001c0001t0001 a0001c0001t0001	1	HG01975.hp2 HG01975.hp2	3_prime_UTR_variant	MODIFIER	c.636C>T c.636C>T	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	636	chr8	12136532
chr8:12136720	C C	A A	1	a0001c0001t0001 a0001c0001t0001	2	HG01168.hp1 HG01169.hp2 HG01168.hp1 HG01169.hp2	3_prime_UTR_variant	MODIFIER	c.448G>T c.448G>T	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	448	chr8	12136720
chr8:12136754	C C	G G	1	a0001c0001t0001 a0001c0001t0001	1	NA19072.hp2 NA19072.hp2	3_prime_UTR_variant	MODIFIER	c.414G>C c.414G>C	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	414	chr8	12136754
chr8:12136762	G G	T T	1	a0001c0001t0001 a0001c0001t0001	65	HG00140.hp1 HG00408.hp1 HG00438.hp1 others(62): Show HG00140.hp1 HG00408.hp1 HG00438.hp1 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG01071.hp1 HG01123.hp2 HG01943.hp1 HG01975.hp1 HG02015.hp1 HG02080.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02273.hp1 HG02293.hp1 HG02300.hp1 HG02523.hp1 HG02647.hp1 HG02735.hp1 HG02922.hp1 HG03017.hp1 HG03540.hp2 HG03831.hp1 HG04115.hp2 NA18747.hp1 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18949.hp2 NA18961.hp1 NA18964.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18977.hp1 NA18977.hp2 NA18986.hp2 NA18988.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp2 NA19004.hp1 NA19006.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19059.hp1 NA19066.hp1 NA19072.hp1 NA19079.hp2 NA19082.hp1 NA19083.hp1 NA19087.hp1	3_prime_UTR_variant	MODIFIER	c.406C>A c.406C>A	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	406	chr8	12136762
chr8:12136912	T T	G G	1	a0001c0001t0001 a0001c0001t0001	1	HG02135.hp1 HG02135.hp1	3_prime_UTR_variant	MODIFIER	c.256A>C c.256A>C	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	256	chr8	12136912
chr8:12136926	C C	T T	1	a0001c0001t0001 a0001c0001t0001	78	HG00140.hp2 HG00438.hp2 HG00558.hp2 others(75): Show HG00140.hp2 HG00438.hp2 HG00558.hp2 HG00733.hp2 HG01071.hp2 HG01123.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01243.hp1 HG01258.hp1 HG01258.hp2 HG01516.hp1 HG01516.hp2 HG01943.hp2 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp2 HG02080.hp2 HG02129.hp1 HG02145.hp1 HG02258.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp2 HG02523.hp2 HG02615.hp1 HG02615.hp2 HG02809.hp2 HG02886.hp2 HG02897.hp2 HG03017.hp2 HG03139.hp2 HG03492.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp2 HG03831.hp2 NA18939.hp2 NA18945.hp2 NA18949.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18960.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18986.hp1 NA18988.hp2 NA18992.hp2 NA18995.hp2 NA18997.hp1 NA19000.hp1 NA19004.hp2 NA19012.hp2 NA19030.hp1 NA19059.hp2 NA19064.hp1 NA19066.hp2 NA19072.hp2 NA19079.hp1 NA19082.hp2 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp2 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.242G>A c.242G>A	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	242	chr8	12136926
chr8:12137071	G G	C C	1	a0001c0001t0001 a0001c0001t0001	1	HG02735.hp1 HG02735.hp1	3_prime_UTR_variant	MODIFIER	c.97C>G c.97C>G	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	97	chr8	12137071
chr8:12137090	C C	T T	1	a0001c0001t0001 a0001c0001t0001	1	NA18988.hp2 NA18988.hp2	3_prime_UTR_variant	MODIFIER	c.78G>A c.78G>A	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	78	chr8	12137090
chr8:12137167	A A	G G	1	a0001c0001t0001 a0001c0001t0001	1	NA18997.hp2 NA18997.hp2	3_prime_UTR_variant	MODIFIER	c.1T>C c.1T>C	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1	chr8	12137167
chr8:12138761	G G	A A	1	a0001c0001t0001 a0001c0001t0001	4	HG02735.hp2 HG03041.hp1 HG03209.hp2 others(1): Show HG02735.hp2 HG03041.hp1 HG03209.hp2 NA20300.hp1	5_prime_UTR_variant	MODIFIER	c.-1C>T c.-1C>T	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	1	chr8	12138761
chr8:12138801	T T	C C	1	a0001c0001t0001 a0001c0001t0001	176	HG00140.hp1 HG00140.hp2 HG00408.hp1 others(173): Show HG00140.hp1 HG00140.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00733.hp1 HG00733.hp2 HG01071.hp1 HG01071.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01243.hp2 HG01258.hp1 HG01258.hp2 HG01516.hp1 HG01516.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02080.hp1 HG02080.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02523.hp1 HG02523.hp2 HG02615.hp1 HG02615.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp2 HG02970.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03130.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03492.hp2 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp1 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18945.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18977.hp1 NA18977.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18992.hp1 NA18992.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19004.hp1 NA19004.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19059.hp1 NA19059.hp2 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19072.hp1 NA19072.hp2 NA19079.hp1 NA19079.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA19087.hp2 NA20300.hp1 NA20300.hp2	5_prime_UTR_variant	MODIFIER	c.-41A>G c.-41A>G	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	41	chr8	12138801
chr8:12138801	T T	G G	1	a0001c0001t0001 a0001c0001t0001	1	HG03688.hp2 HG03688.hp2	5_prime_UTR_variant	MODIFIER	c.-41A>C c.-41A>C	USP17L2	ENSG00000223443.3	transcript	ENST00000333796.4	protein_coding	1/1	41	chr8	12138801

view	chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	genebody_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

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USP17L2_chr8_12131435_12143849 Genic Haplotype Structure on iGV

Translation Multiple Alignment View

Gene Summary (with MANE)

Amino acid(protein) Level Haplotype Info (Total: 2)

Coding Level Haplotype Info (Total: 2)

Transcript Level Haplotype Info (Total: 2)

Genebody Level Haplotype Info (Total: 2)

Haplotype Details by Sample (Haploid Level) (Total: 195)

Amino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 24)

Coding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 9)

Transcript Level Haplotype Variants (Exon) (Total: 16)

Genebody Level Haplotype Variants (Intron) (Total: 0)

Annotation (Repeats)

Annotation (SNP Array)