Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

geneid	276
ensemblid	ENSG00000237763.10
hgncid	474
symbol	AMY1A
name	amylase alpha 1A
refseq_nuc	NM_004038.4
refseq_prot	NP_004029.2
ensembl_nuc	ENST00000370083.9
ensembl_prot	ENSP00000359100.4
mane_status	MANE Select
chr	chr1
start	103655760
end	103664554
strand	+
ver	v1.2
region	chr1:103655760-103664554
region5000	chr1:103650760-103669554
regionname0	AMY1A_chr1_103655760_103664554
regionname5000	AMY1A_chr1_103650760_103669554

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0000	0/0	0	1	0	0	0	0	1	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0001	0/0	511	217	40	31	105	5	36	86	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0002	0/0	511	2	0	0	2	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0003	0/0	511	1	0	0	1	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0004	0/0	511	1	0	0	1	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0005	0/0	511	1	0	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0006	0/0	511	1	1	0	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0007	0/0	511	1	0	0	1	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0008	0/0	511	1	0	0	1	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0009	0/0	351	1	0	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0010	0/0	511	1	1	0	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0011	0/0	511	1	0	0	1	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0012	0/0	511	1	0	0	0	0	1	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/0	1536	211	39	30	103	5	34	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
c0002	0/0	1536	2	0	0	2	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
c0003	0/0	1536	2	0	0	2	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
c0004	0/0	1536	2	0	0	0	0	2	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
c0005	0/0	1536	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
c0006	0/0	1536	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
c0007	0/0	513	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
c0008	0/0	1536	1	0	0	0	1	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
c0009	0/0	1536	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
c0010	0/0	1536	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
c0011	0/0	1536	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
c0012	0/0	1536	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
c0013	0/0	1536	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
c0014	0/0	1536	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
c0015	0/0	1536	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
c0016	0/0	1536	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
c0017	0/0	1536	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/0	250	226	41	31	111	6	37	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
t0002	0/0	250	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
t0003	0/0	250	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
t0004	0/0	250	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
t0005	0/0	216	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	19	1	5	6	3	4	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0002	0/0	16	0	0	11	0	5	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0003	0/0	15	1	1	4	0	9	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0004	0/0	12	1	3	8	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0005	0/0	9	0	3	1	1	4	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0006	0/0	9	0	0	9	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0007	0/0	8	1	1	6	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0008	0/0	7	1	0	5	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0009	0/0	7	1	1	4	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0010	0/0	6	0	0	6	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0011	0/0	5	5	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0012	0/0	4	0	0	4	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0013	0/0	4	0	2	2	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0014	0/0	4	0	0	4	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0015	0/0	4	0	1	0	0	3	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0016	0/0	3	3	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0017	0/0	3	0	1	0	0	2	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0018	0/0	3	0	0	3	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0019	0/0	3	3	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0020	0/0	2	2	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0021	0/0	2	0	1	0	1	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0022	0/0	2	2	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0023	0/0	2	0	0	2	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0024	0/0	2	0	0	2	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0025	0/0	2	2	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0026	0/0	2	0	2	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0027	0/0	2	0	0	1	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0028	0/0	2	2	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0029	0/0	2	0	1	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0030	0/0	2	0	1	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0031	0/0	2	0	0	2	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0032	0/0	2	0	2	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0033	0/0	2	0	0	2	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0034	0/0	2	0	0	2	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0035	0/0	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0036	0/0	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0037	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0038	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0039	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0040	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0041	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0042	0/0	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0043	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0044	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0045	0/0	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0046	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0047	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0048	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0049	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0050	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0051	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0052	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0053	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0054	0/0	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0055	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0056	0/0	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0057	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0058	0/0	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0059	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0060	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0061	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0062	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0063	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0064	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0065	0/0	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0066	0/0	1	0	0	0	1	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0067	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0068	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0069	0/0	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0070	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0071	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0072	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0073	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0074	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0075	0/0	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0076	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0077	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0078	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0079	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0080	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0081	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0082	0/0	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0083	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0084	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0085	0/0	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0086	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0087	0/0	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0088	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0089	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0090	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0091	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0092	0/0	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
g0093	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0000c0007	0/0	513	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0001c0001	0/0	1536	211	39	30	103	5	34	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0001c0003	0/0	1536	2	0	0	2	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0001c0004	0/0	1536	2	0	0	0	0	2	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0001c0010	0/0	1536	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0001c0013	0/0	1536	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0002c0002	0/0	1536	2	0	0	2	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0003c0017	0/0	1536	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0004c0016	0/0	1536	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0005c0008	0/0	1536	1	0	0	0	1	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0006c0012	0/0	1536	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0007c0009	0/0	1536	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0008c0011	0/0	1536	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0009c0015	0/0	1536	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0010c0014	0/0	1536	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0011c0006	0/0	1536	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0012c0005	0/0	1536	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0000c0007t0005	0/0	728	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0001c0001t0001	0/0	1785	208	38	29	102	5	34	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0001c0001t0002	0/0	1785	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0001c0001t0003	0/0	1785	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0001c0001t0004	0/0	1785	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0001c0003t0001	0/0	1785	2	0	0	2	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0001c0004t0001	0/0	1785	2	0	0	0	0	2	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0001c0010t0001	0/0	1785	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0001c0013t0001	0/0	1785	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0002c0002t0001	0/0	1785	2	0	0	2	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0003c0017t0001	0/0	1785	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0004c0016t0001	0/0	1785	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0005c0008t0001	0/0	1785	1	0	0	0	1	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0006c0012t0001	0/0	1785	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0007c0009t0001	0/0	1785	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0008c0011t0001	0/0	1785	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0009c0015t0001	0/0	1785	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0010c0014t0001	0/0	1785	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0011c0006t0001	0/0	1785	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554
a0012c0005t0001	0/0	1785	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	copy fasta	chr1	103650760	103669554

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0000c0007t0005g0075	0/0	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0001	0/0	17	1	5	5	2	4	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0002	0/0	16	0	0	11	0	5	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0003	0/0	15	1	1	4	0	9	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0004	0/0	10	1	3	6	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0005	0/0	7	0	3	1	1	2	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0006	0/0	9	0	0	9	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0007	0/0	8	1	1	6	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0008	0/0	7	1	0	5	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0009	0/0	6	1	0	4	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0010	0/0	4	0	0	4	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0011	0/0	4	4	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0012	0/0	3	0	0	3	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0013	0/0	4	0	2	2	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0014	0/0	4	0	0	4	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0015	0/0	4	0	1	0	0	3	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0016	0/0	3	3	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0017	0/0	3	0	1	0	0	2	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0018	0/0	3	0	0	3	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0019	0/0	2	2	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0020	0/0	2	2	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0021	0/0	2	0	1	0	1	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0022	0/0	2	2	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0023	0/0	2	0	0	2	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0024	0/0	2	0	0	2	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0025	0/0	2	2	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0026	0/0	2	0	2	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0027	0/0	2	0	0	1	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0028	0/0	2	2	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0029	0/0	2	0	1	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0030	0/0	2	0	1	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0031	0/0	2	0	0	2	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0032	0/0	2	0	2	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0033	0/0	2	0	0	2	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0034	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0035	0/0	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0036	0/0	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0037	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0038	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0040	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0041	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0042	0/0	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0044	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0046	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0047	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0048	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0049	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0050	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0051	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0052	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0053	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0054	0/0	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0056	0/0	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0057	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0058	0/0	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0059	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0060	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0061	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0062	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0063	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0064	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0066	0/0	1	0	0	0	1	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0067	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0068	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0071	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0072	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0073	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0074	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0076	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0078	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0079	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0080	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0081	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0082	0/0	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0083	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0084	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0085	0/0	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0086	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0087	0/0	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0088	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0089	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0090	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0091	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0092	0/0	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0001g0093	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0002g0045	0/0	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0003g0011	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0001t0004g0077	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0003t0001g0004	0/0	2	0	0	2	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0004t0001g0005	0/0	2	0	0	0	0	2	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0010t0001g0009	0/0	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0001c0013t0001g0019	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0002c0002t0001g0039	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0002c0002t0001g0055	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0003c0017t0001g0001	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0004c0016t0001g0010	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0005c0008t0001g0001	0/0	1	0	0	0	1	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0006c0012t0001g0043	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0007c0009t0001g0012	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0008c0011t0001g0010	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0009c0015t0001g0069	0/0	1	0	1	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0010c0014t0001g0070	0/0	1	1	0	0	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0011c0006t0001g0034	0/0	1	0	0	1	0	0	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
a0012c0005t0001g0065	0/0	1	0	0	0	0	1	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00140	hp1	a0005	c0008	t0001	g0001	EUR	GBR	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG00140	hp2	a0001	c0001	t0001	g0021	EUR	GBR	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG00408	hp1	a0001	c0001	t0001	g0013	EAS	CHS	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG00408	hp2	a0001	c0001	t0001	g0014	EAS	CHS	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG00544	hp1	a0001	c0001	t0001	g0003	EAS	CHS	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG00544	hp2	a0001	c0001	t0001	g0008	EAS	CHS	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG00558	hp1	a0001	c0001	t0001	g0014	EAS	CHS	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG00558	hp2	a0001	c0001	t0001	g0023	EAS	CHS	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG00597	hp1	a0001	c0001	t0001	g0050	EAS	CHS	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG00597	hp2	a0001	c0001	t0001	g0006	EAS	CHS	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG00609	hp1	a0001	c0001	t0001	g0012	EAS	CHS	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG00609	hp2	a0001	c0001	t0001	g0001	EAS	CHS	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG00642	hp1	a0001	c0010	t0001	g0009	AMR	PUR	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG00642	hp2	a0001	c0001	t0001	g0035	AMR	PUR	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG00735	hp1	a0001	c0001	t0001	g0007	AMR	PUR	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG00735	hp2	a0001	c0001	t0001	g0029	AMR	PUR	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG00738	hp1	a0001	c0001	t0001	g0042	AMR	PUR	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG00738	hp2	a0001	c0001	t0001	g0001	AMR	PUR	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01069	hp1	a0001	c0001	t0001	g0021	AMR	PUR	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01069	hp2	a0001	c0001	t0001	g0036	AMR	PUR	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01070	hp1	a0001	c0001	t0001	g0017	AMR	PUR	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01070	hp2	a0001	c0001	t0001	g0015	AMR	PUR	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01106	hp1	a0001	c0001	t0001	g0013	AMR	PUR	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01106	hp2	a0001	c0001	t0001	g0004	AMR	PUR	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01167	hp1	a0001	c0001	t0001	g0005	AMR	PUR	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01167	hp2	a0001	c0001	t0001	g0001	AMR	PUR	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01255	hp1	a0001	c0001	t0001	g0005	AMR	CLM	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01255	hp2	a0001	c0001	t0001	g0001	AMR	CLM	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01256	hp1	a0001	c0001	t0001	g0001	AMR	CLM	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01256	hp2	a0001	c0001	t0001	g0001	AMR	CLM	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01261	hp1	a0001	c0001	t0001	g0013	AMR	CLM	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01261	hp2	a0001	c0001	t0001	g0004	AMR	CLM	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01516	hp2	a0001	c0001	t0001	g0005	EUR	IBS	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01517	hp1	a0001	c0001	t0001	g0001	EUR	IBS	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01517	hp2	a0001	c0001	t0001	g0066	EUR	IBS	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01884	hp1	a0001	c0001	t0001	g0028	AFR	ACB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01884	hp2	a0001	c0001	t0001	g0016	AFR	ACB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01934	hp1	a0009	c0015	t0001	g0069	AMR	PEL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01934	hp2	a0001	c0001	t0002	g0045	AMR	PEL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01952	hp1	a0001	c0001	t0001	g0026	AMR	PEL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01952	hp2	a0001	c0001	t0001	g0032	AMR	PEL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01981	hp1	a0001	c0001	t0001	g0030	AMR	PEL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01981	hp2	a0001	c0001	t0001	g0005	AMR	PEL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01993	hp1	a0001	c0001	t0001	g0087	AMR	PEL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG01993	hp2	a0001	c0001	t0001	g0026	AMR	PEL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02055	hp1	a0001	c0001	t0001	g0016	AFR	ACB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02055	hp2	a0001	c0001	t0001	g0044	AFR	ACB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02074	hp1	a0001	c0001	t0001	g0034	EAS	KHV	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02074	hp2	a0001	c0001	t0001	g0009	EAS	KHV	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02080	hp1	a0001	c0001	t0001	g0002	EAS	KHV	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02080	hp2	a0001	c0001	t0001	g0014	EAS	KHV	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02083	hp1	a0001	c0001	t0001	g0089	EAS	KHV	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02083	hp2	a0001	c0001	t0001	g0060	EAS	KHV	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02135	hp1	a0001	c0001	t0001	g0006	EAS	KHV	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02135	hp2	a0001	c0001	t0001	g0076	EAS	KHV	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02148	hp1	a0001	c0001	t0001	g0058	AMR	PEL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02148	hp2	a0001	c0001	t0001	g0032	AMR	PEL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02258	hp1	a0001	c0001	t0001	g0019	AFR	ACB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02258	hp2	a0001	c0013	t0001	g0019	AFR	ACB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02280	hp1	a0001	c0001	t0001	g0073	AFR	ACB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02280	hp2	a0001	c0001	t0001	g0028	AFR	ACB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02300	hp1	a0001	c0001	t0001	g0004	AMR	PEL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02300	hp2	a0001	c0001	t0001	g0003	AMR	PEL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02451	hp1	a0001	c0001	t0001	g0020	AFR	ACB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02451	hp2	a0006	c0012	t0001	g0043	AFR	ACB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02523	hp1	a0001	c0001	t0001	g0063	EAS	KHV	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02523	hp2	a0002	c0002	t0001	g0055	EAS	KHV	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02572	hp1	a0001	c0001	t0001	g0059	AFR	GWD	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02572	hp2	a0001	c0001	t0001	g0016	AFR	GWD	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02602	hp1	a0012	c0005	t0001	g0065	SAS	PJL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02602	hp2	a0001	c0001	t0001	g0005	SAS	PJL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02622	hp1	a0001	c0001	t0001	g0011	AFR	GWD	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02622	hp2	a0001	c0001	t0001	g0046	AFR	GWD	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02630	hp1	a0001	c0001	t0001	g0041	AFR	GWD	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02630	hp2	a0001	c0001	t0001	g0011	AFR	GWD	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02717	hp1	a0001	c0001	t0001	g0001	AFR	GWD	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02717	hp2	a0001	c0001	t0003	g0011	AFR	GWD	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02735	hp1	a0001	c0001	t0001	g0003	SAS	PJL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02735	hp2	a0001	c0001	t0001	g0085	SAS	PJL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02738	hp1	a0001	c0001	t0001	g0054	SAS	PJL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02738	hp2	a0001	c0001	t0001	g0056	SAS	PJL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02818	hp1	a0001	c0001	t0001	g0011	AFR	GWD	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02818	hp2	a0001	c0001	t0001	g0051	AFR	GWD	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02965	hp1	a0001	c0001	t0001	g0025	AFR	ESN	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02965	hp2	a0010	c0014	t0001	g0070	AFR	ESN	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03017	hp1	a0001	c0001	t0001	g0082	SAS	PJL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03017	hp2	a0001	c0001	t0001	g0002	SAS	PJL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03139	hp1	a0001	c0001	t0001	g0011	AFR	ESN	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03139	hp2	a0001	c0001	t0001	g0049	AFR	ESN	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03209	hp1	a0001	c0001	t0001	g0078	AFR	MSL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03209	hp2	a0001	c0001	t0001	g0019	AFR	MSL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03239	hp1	a0001	c0001	t0001	g0003	SAS	PJL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03239	hp2	a0001	c0001	t0001	g0015	SAS	PJL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03486	hp1	a0001	c0001	t0001	g0047	AFR	MSL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03486	hp2	a0001	c0001	t0001	g0008	AFR	MSL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03491	hp1	a0001	c0004	t0001	g0005	SAS	PJL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03491	hp2	a0001	c0001	t0001	g0092	SAS	PJL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03492	hp1	a0000	c0007	t0005	g0075	SAS	PJL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03492	hp2	a0001	c0001	t0001	g0001	SAS	PJL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03516	hp1	a0001	c0001	t0001	g0003	AFR	ESN	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03516	hp2	a0001	c0001	t0001	g0052	AFR	ESN	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03654	hp1	a0001	c0001	t0001	g0003	SAS	PJL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03654	hp2	a0001	c0001	t0001	g0001	SAS	PJL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03688	hp1	a0001	c0001	t0001	g0017	SAS	STU	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03688	hp2	a0001	c0001	t0001	g0017	SAS	STU	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03704	hp1	a0001	c0001	t0001	g0002	SAS	PJL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03704	hp2	a0001	c0001	t0001	g0003	SAS	PJL	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03831	hp1	a0001	c0001	t0001	g0029	SAS	BEB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03831	hp2	a0001	c0001	t0001	g0015	SAS	BEB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03834	hp2	a0001	c0001	t0001	g0015	SAS	BEB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03927	hp1	a0001	c0001	t0001	g0001	SAS	BEB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03927	hp2	a0001	c0001	t0001	g0003	SAS	BEB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03942	hp1	a0001	c0001	t0001	g0003	SAS	BEB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG03942	hp2	a0001	c0001	t0001	g0003	SAS	BEB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG04115	hp1	a0001	c0001	t0001	g0027	SAS	STU	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG04115	hp2	a0001	c0001	t0001	g0009	SAS	STU	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG04184	hp1	a0001	c0001	t0001	g0002	SAS	BEB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG04184	hp2	a0001	c0001	t0001	g0002	SAS	BEB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG04199	hp1	a0001	c0001	t0001	g0003	SAS	STU	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG04199	hp2	a0001	c0001	t0001	g0002	SAS	STU	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG04228	hp1	a0001	c0001	t0001	g0005	SAS	STU	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG04228	hp2	a0001	c0001	t0001	g0008	SAS	STU	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18522	hp1	a0001	c0001	t0001	g0071	AFR	YRI	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18522	hp2	a0001	c0001	t0001	g0048	AFR	YRI	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18906	hp1	a0001	c0001	t0001	g0022	AFR	YRI	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18906	hp2	a0001	c0001	t0001	g0022	AFR	YRI	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18939	hp1	a0001	c0001	t0001	g0006	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18939	hp2	a0001	c0001	t0001	g0005	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18940	hp1	a0001	c0001	t0001	g0027	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18940	hp2	a0008	c0011	t0001	g0010	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18941	hp1	a0001	c0001	t0001	g0018	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18941	hp2	a0001	c0001	t0001	g0004	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18944	hp1	a0001	c0001	t0001	g0093	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18944	hp2	a0001	c0001	t0001	g0064	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18948	hp1	a0001	c0001	t0001	g0009	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18948	hp2	a0001	c0001	t0001	g0024	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18950	hp1	a0001	c0001	t0001	g0072	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18950	hp2	a0001	c0001	t0001	g0008	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18951	hp1	a0001	c0001	t0001	g0002	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18951	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18954	hp1	a0001	c0001	t0001	g0002	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18954	hp2	a0001	c0001	t0001	g0006	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18957	hp1	a0004	c0016	t0001	g0010	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18957	hp2	a0001	c0001	t0001	g0086	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18961	hp1	a0001	c0001	t0001	g0003	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18961	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18962	hp1	a0002	c0002	t0001	g0039	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18962	hp2	a0001	c0001	t0001	g0091	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18963	hp1	a0001	c0001	t0001	g0033	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18963	hp2	a0001	c0001	t0001	g0004	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18970	hp1	a0001	c0001	t0001	g0006	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18970	hp2	a0001	c0001	t0001	g0002	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18973	hp1	a0003	c0017	t0001	g0001	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18973	hp2	a0001	c0001	t0001	g0081	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18975	hp1	a0001	c0001	t0001	g0010	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18975	hp2	a0001	c0001	t0001	g0004	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18977	hp1	a0001	c0001	t0001	g0006	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18977	hp2	a0001	c0001	t0001	g0003	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18981	hp1	a0001	c0001	t0001	g0002	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18981	hp2	a0001	c0001	t0001	g0010	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18985	hp1	a0001	c0001	t0001	g0008	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18985	hp2	a0011	c0006	t0001	g0034	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18986	hp1	a0007	c0009	t0001	g0012	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18986	hp2	a0001	c0001	t0001	g0012	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18988	hp1	a0001	c0001	t0001	g0023	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18988	hp2	a0001	c0001	t0001	g0001	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18991	hp1	a0001	c0001	t0001	g0007	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18991	hp2	a0001	c0001	t0001	g0057	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18992	hp1	a0001	c0001	t0001	g0008	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA18992	hp2	a0001	c0001	t0001	g0088	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19000	hp1	a0001	c0001	t0001	g0079	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19000	hp2	a0001	c0001	t0001	g0004	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19002	hp1	a0001	c0001	t0001	g0018	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19002	hp2	a0001	c0001	t0004	g0077	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19003	hp1	a0001	c0001	t0001	g0031	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19003	hp2	a0001	c0001	t0001	g0030	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19004	hp1	a0001	c0001	t0001	g0002	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19004	hp2	a0001	c0001	t0001	g0009	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19006	hp1	a0001	c0001	t0001	g0014	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19006	hp2	a0001	c0001	t0001	g0006	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19009	hp1	a0001	c0001	t0001	g0013	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19009	hp2	a0001	c0001	t0001	g0007	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19011	hp1	a0001	c0001	t0001	g0002	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19011	hp2	a0001	c0003	t0001	g0004	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19058	hp1	a0001	c0001	t0001	g0037	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19058	hp2	a0001	c0001	t0001	g0007	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19059	hp1	a0001	c0001	t0001	g0061	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19059	hp2	a0001	c0001	t0001	g0031	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19060	hp1	a0001	c0001	t0001	g0010	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19060	hp2	a0001	c0001	t0001	g0006	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19063	hp1	a0001	c0001	t0001	g0053	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19063	hp2	a0001	c0001	t0001	g0008	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19064	hp1	a0001	c0001	t0001	g0001	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19064	hp2	a0001	c0001	t0001	g0004	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19065	hp1	a0001	c0001	t0001	g0007	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19065	hp2	a0001	c0001	t0001	g0004	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19068	hp1	a0001	c0001	t0001	g0009	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19068	hp2	a0001	c0001	t0001	g0012	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19070	hp1	a0001	c0001	t0001	g0002	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19070	hp2	a0001	c0001	t0001	g0024	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19072	hp1	a0001	c0001	t0001	g0090	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19072	hp2	a0001	c0003	t0001	g0004	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19077	hp1	a0001	c0001	t0001	g0002	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19077	hp2	a0001	c0001	t0001	g0007	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19078	hp1	a0001	c0001	t0001	g0084	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19078	hp2	a0001	c0001	t0001	g0033	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19080	hp1	a0001	c0001	t0001	g0006	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19080	hp2	a0001	c0001	t0001	g0038	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19084	hp1	a0001	c0001	t0001	g0010	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19084	hp2	a0001	c0001	t0001	g0003	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19085	hp1	a0001	c0001	t0001	g0007	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19085	hp2	a0001	c0001	t0001	g0068	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19086	hp1	a0001	c0001	t0001	g0002	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19086	hp2	a0001	c0001	t0001	g0067	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19089	hp1	a0001	c0001	t0001	g0062	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19089	hp2	a0001	c0001	t0001	g0083	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19091	hp1	a0001	c0001	t0001	g0018	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19091	hp2	a0001	c0001	t0001	g0002	EAS	JPT	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19240	hp1	a0001	c0001	t0001	g0020	AFR	YRI	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA19240	hp2	a0001	c0001	t0001	g0074	AFR	YRI	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA20905	hp1	a0001	c0004	t0001	g0005	SAS	GIH	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA20905	hp2	a0001	c0001	t0001	g0003	SAS	GIH	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02109	hp1	a0001	c0001	t0001	g0080	AFR	ACB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02109	hp2	a0001	c0001	t0001	g0025	AFR	ACB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02559	hp1	a0001	c0001	t0001	g0040	AFR	ACB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
HG02559	hp2	a0001	c0001	t0001	g0009	AFR	ACB	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA20300	hp1	a0001	c0001	t0001	g0007	AFR	USA	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554
NA20300	hp2	a0001	c0001	t0001	g0004	AFR	USA	AMY1A_chr1_103650760_103669554	AMY1A	chr1	103650760	103669554

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr1:103656350	T T	G G	1	a0012 a0012	1	HG02602.hp1 HG02602.hp1	missense_variant	MODERATE	c.20T>G c.20T>G	p.Leu7Arg p.Leu7Arg	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	2/11	235/1785	20/1536	7/511	chr1	103656350
chr1:103656868	G G	A A	1	a0011 a0011	1	NA18985.hp2 NA18985.hp2	missense_variant	MODERATE	c.193G>A c.193G>A	p.Ala65Thr p.Ala65Thr	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	3/11	408/1785	193/1536	65/511	chr1	103656868
chr1:103656893	G G	T T	1	a0003 a0003	1	NA18973.hp1 NA18973.hp1	missense_variant	MODERATE	c.218G>T c.218G>T	p.Trp73Leu p.Trp73Leu	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	3/11	433/1785	218/1536	73/511	chr1	103656893
chr1:103656920	A A	G G	1	a0004 a0004	1	NA18957.hp1 NA18957.hp1	missense_variant	MODERATE	c.245A>G c.245A>G	p.Tyr82Cys p.Tyr82Cys	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	3/11	460/1785	245/1536	82/511	chr1	103656920
chr1:103658184	TACACATT others(11363): Show TACACATTTGTCCACTTTTAAAAAGCTCCCAACCAATTGAAAAACTCATC GACTTTATTTCCTAAGTTCTCTATTTTCTATTAGAAAATATTTCCAAGAT ACATCTATAGTAGAATGTGAGCATCCCCAGTGTCCAATGCAAGGAAGTCA CCATAGAATATCTCTTGAGGAATCATGGAATAAATGAATAATCAAATGGA TTCTCAGGCGAAAAGTGAGGTTTTATTAATCAATCATAACATTCTTACCT CAACAGGTCAGAGATTGTCGTCTGTCTGGTCTTCTCGATCTTGCACTGGG GAAGGATTATGTGCGTTCTAAGATTGCCGAATATATGAACCATCTCATTG ACATTGGTGTTGCAGGGTTCAGAATTGATGCTTCCAAGCACATGTGGCCT GGAGACATAAAGGCAATTTTGGACAAACTGCATAATCTAAACAGTAACTG GTTCCCGGAAGGTAGTAAACCTTTCATTTACCAGGAGGTACGTCAATACA TATAGGCATATAAAATATCATCCTATTCATTAGAAAATTCACGGCAGATT CAATTAAAAATGCAATTTCTGTAGGATAAAGACTGAGTCATTTCCTTAAA ACAGTGTTCTTTAACCTCCTCTTCTTCACATACAGCATATCTAATTCTTT ATCACAACAGGTTTTATGGAGGTACACAGAATGTAGGATACTGATAATAG TTATGTCTTTATTTTCTTTGGAAAATGAAATGAGTTAATATTTATCAAAA AAAGTCAGTCAGATAGTAAATATCGTATTCCTGTGAGCTGTTATTATTAT CATTGATGTACAAGACTAAAAATTAGGTAAGTATTCTCACAGGACAACAG GTAACTTTGACATTATGTTTCTTTCAATATTGTAGTGTATACTTTATCAA AAAAAGAATATAAGAATATTACCGATGAAGATAATAAGAATAAGAAAACG ATTTTGAGCGTTTCATATAACAAATAGGACCAGGCGTGGTGGCTCTTGCA TGTAACTCAGCACTTTGGGAGGCTGAGGCAGGAGAATTCCTTGAGGCCTG GAGTTTGGGACCATCCTGGACGATATAGCAAGACCCTGTCTCTAAAGAAC AAAGCACAACAAGTCTAAAATAACTCAGAAATAGCTGAAAGCTAATTTTT ATATAATATAAACTTATCGGTTAAAATGCTTTAAAGTCCTTATGCAAAAT GTTTTTTTTTCCTAAATTTCTTCTAGGTAATTGATCTGGGTGGTGAGCCA ATTAAAAGCAGTGACTACTTTGGTAATGGCCGGGTGACAGAATTCAAGTA TGGTGCAAAACTCGGCACAGTTATTCGCAAGTGGAATGGAGAGAAGATGT CTTACTTAAAGTAAATAAATACAACTTTTCCCCTGAACTATTTCATAGAT CTGTTAGTCATACTACCCCAGTGCGAGTTATCTTCTGGAACATTCTTATT CAGACAACTATTAAGGAGTCAGTTGTTAATGATAAGTATTCTAGTGCCCT AAACTCTAATCAATCATCTTTTGTATTTAGAGTGTCTGTCACAAGACAGT ATGCCTAGGAACGCTAAACTTACCCTAGGAGTTTCTGTCTGCGTACAAGA TGAATATACTGGATTTGACTGATGTTTGCATATAATCTTTTAAAGCCAGG TTATTATTAAAATGATCCTATCATTTATAAAGTATGTACAAAGTGTCCAT GCTATTGTATTTACTTATACGAATTGGAAATGTAAAATGATTTATATTAT AACAATACAATATTAAAGCCTTATTTTAATCTAGTTTGACATTCTGTATA ATGTGATGTGGATATTGATCCTTCTGGAGTGCCTCTAAATGATAATGTGC TGAAACCTCTGAAAGGAAATTTTTTAATAACAAACATTTTATATTTGTAA TATGAATATAAGTATTCCATACATGTATATACAAATATGGACTATATATA TGTAGATTACACACGTGTGTTTGTTTATGAGGTGTGTGTGTATATATATG TGAGTGTGTGTTTGTGTGTGTGTGTGTATATATATATATCTTACAGAGTA ACCATCTAATTAGAGAAAGAATTTAATCTTCAGATGCCATGCCTTACAGA AAGAGATGCACAGTAGAGTTACTCTCAAACTATTGTGAAATGATACATCA ACGTATATCTTATGTTTCAAAAATAGGAACTGGGGAGAAGGTTGGGGTTT CATGCCTTCTGACAGAGCGCTTGTCTTTGTGGATAACCATGACAATCAAC GAGGACATGGCGCTGGAGGAGCCTCTATACTTACCTTCTGGGATGCTAGG TAAAAAACCAAGTTCTCTATTTTTTTAACACCTCTTTTAATGATGGTATG AATATTGTGATATTCTATGATAATATAATTATGTAACTTTCAGGCTGTAC AAAATGGCAGTTGGATTTATGCTTGCTCATCCTTATGGATTTACACGAGT AATGTCAAGCTACCGTTGGCCAAGATATTTTGAAAATGGAAAAGTAAGTT TTGGAGTTGTTCAAAATATCCTTTTCTCAAGAAAAAAGAGGCAATCTTCT CCTAATTTAATATGACAACTATTAAGTGTTTATTTATTCAACAAATATTT AATTATTGTAAACCTGATACAGGATTGTGATTTAGTAATGCAGGTTATAT TAAAGGAATAAACTTTATATTCTCCATTGAAAAAGAATAGCAAGCTTTTT CAGAGATATGACAAACATCCCCCTAGCCCGCAGGGAAAATAAAAATAAAA ATTAAAAAAACCACTTAAAAATAAGAGCTAGGCACAGGGATTAAAATATA TACTTCGTACCTTCCTCAGGTTTAATTGGAAGAATATAGATGCCAACCCT TGTAGAGAACTTAAAACATCATCTGCCCGTAGTGAGAACAATATAAATGT CTTTTAAATACTGTTAAAAAGTTATATGGAATAGAAACAAATGATCCAGT TCAGCTGAGTTAAATAGGGAAAGTATACTATAAGAGGAAGGAAATTGTAT GTACTAAAGGATAGAAATTTATAGAGAGTATTCCAAGAAAGGTAAGAATG AGAAAAATATTTGGGAGTATGGTAAAGACATCACTCTGCTGAGTAGTTTC AAAAAGGAACAGAGAAATAAGAGTGTAAAGATATTTGGAAAGCTAGTAGA AGGTTTTCTTTTAAACTAAAGGGTTGAGAAACAGCATCAGAGACTTCAGA ACTAAAGCAGAAATTCCTCCTTCCTATGAGTCACACAGATATCTAGCTAG CTTTTTTTAGATTCCTTTCAGTTTGAGAAGTCCGCTACTATGTATAACAA CTGATTCTATTGTTAAACAGCTTTAATATTTAGAAGGTGTACTTTTATAT TGAGACAACTTCTTATAATTTCTACTAATTGGTCTTATTTCTGTTGTTAG GAGTCAGAGAGTTCTTTTATTTTTTCTATTACTATAACATTCCCACTTTG ACAGGACTGCTGCATGCTATAAACTCTTAAGTTTTGTTCACTTTTCACCA TATGACGTGATTTTAAGGTGAACACTGATAAACTTCCTAGGGTTACTCTG TGTTTTTTAATGAAGATTTCTTAAAGTGCCAATCAGAAAAGCATAATACT AAAAATATGGTCAATTTATAAAAAAAAAATGTTCAGATGTAGTATTTTGT ACATTTATCTAAAAAGAAGCATGACGGCCTCCAATATTTATTTAGCATAT GTCATGTTCAAGGCATTTTCACATATATTACTTAATTTTTATAGCAAAAG AACTCATTATTCTCATTTTACAAATGAGGAAACTGAGACACAGAGAAATT ATTTATATTGATTAAATTTTCTCAGCTACTAGTAATAGAGCCTATGTTTT AATCCTGGTGTTTCTAGTACTAATGCCCTTCCCATTTCAATGCCATTGCA TGGCTTACAGTGATGTTAAGAAGCCCTTGCAGGCCAGGTGCAGTGGCTCA CACCTATAATCCCAGCACTGTGTGCGGCCAGCTGAGAAGGTCAGCTGACC TGAGGAGTTCAAGACCTATCTGGGCAAGCTAGCAAGACCTTGCCTCTACT GAAAATTAAAAAAAAAAAAAAATTAGCTGGGTGCGGTGGTGCACACCAAC AGTCTTAGCTACTTGGGAGGCTGAGATGGGAGGTTCGCTTGAGCCTCGGA GATCAAGGCTGCAGTGAGCTACGATCATGCCACTGTACTCCAGCCTGGGT GACAGAGCAAAGAAGTCTTTGCAGTGCCTTGGAATGAAAAGGAGAGGATA ACAATTTGCTACCTTTGTTTGAAATATGGCAAAAGAGAACCAGAGGATAG AGAGATGATGAAGACCCAGTAAAGGGCTATAAAAATCAATGAAGGCATTG GATTCTAGATAAAGTCACTGAATGCAGAGACACAAGTAACAGGATAGGTT GGGTTTGGTTTAAAGGAGAAGGAAGAGATAAATATATATATGCTAAAATT TGGCTTTTCCTCCTGTAATTAAGGATGTTAATGATTGGGTTGGGCCACCA AATGATAATGGAGTAACTAAAGAAGTTACTATTAATCCAGACACTACTTG TGGCAATGACTGGGTCTGTGAACATCGATGGCGCCAAATAAGGTGAGAAT ATGTATTTAGACATGTCCTCTAATAGTAAATTTCCGTAGCACTTTATTTA AAACAGTTGAAGTTTAAGAATATCAACGTTTTATATGGTATTGTGTTTTT AGGAACATGGTTAATTTCCGCAATGTAGTGGATGGCCAGCCTTTTACAAA CTGGTATGATAATGGGAGCAACCAAGTGGCTTTTGGGAGAGGAAACAGAG GATTCATTGTTTTCAACAATGATGACTGGTAAGTAAATATCAATTAAAAA TAATATTTTGTACCAGTATGTTCTTGGTTTATTCTTTTTTTTTTCTGTTC ATTGACATTTATCATATCTGAAAAATCATGTAGTCAGTGGAGCGAGAAGA CAATAGAGATCAAAATTGGGTAGAAGCAAAAGGATGATGGCTGTTACTCC TTCGTTCTCCTGTTTTCATAAGTGCTTTCTGTTGTAAGCAGAATCCTTTC TGTGCACCCTTGCAATATCTTATGCATATATAGAATGCACATTCATATGC TTACCTACACATGCCACAAAATACACAAAGTAATTAATAGAAGGATTGTG AAATCATTAAAAGAACGTTTCTTATAGTCCTGCTCTTTTAATCATGGAAA AATGCTGCCTCAGTACTAAAATATCTTTATTTCTCTTTTTCTCAATGACA GCTCTACCTAGTTTTTTGGTATACTTTCTTCACTTCTCTGTCTCCTTGTG ACAAATAACATTTTTAAAGCATATGGATAAATAATATGTATCTTGTGGTT AATGATTTGCTTCAGGAGACTTGAGTTTTAGTTCTGAAACTTCTCATTAT TGGCCTTTCATCTGTGATTTTTGTATCCTTTGGCTGTAGTATAAATGATT CCCGAAACTGTAGCTGAGAAGACCTCCTTGCAAACAGTTGAATTGTCTCT GTCCAAGGCCAACTGACACTCATACTTAGCTCACTCTAGTATAAATTATA CTTCACTTATGAAAAATAAATAAATACAAAAATATATAAGTCAAGTTGAT CTCTTTCCTGCCAAAAAAATGCGTGTCTATTTCCTTAGTTTCCTTCTTTT GTGGATGAAAATACCAAAAAAATCTTTTGTGAAAAAGCTTTATATTTCAA ACTATCACTTCCTCATACAAATGCTAGACTGTTTTTATGTACACCCTAAA TTCTTTTTGACCTCATGTAGAATAAAAGAAGGTTAAAAAAATAATACCCT TTAAATTTTTAAAGTAATTGGCATTAAGTTCAGTTGAGAAAAAATTTGAT TTTACCAAGGTAGCACTTTATCAAAATGTGACCGCTCCCGCCAATCTTCG GTGATATTCTTCAACTTTGATTTTTCGGTTATATTTTCACTACTGAAAAG GAAATTGGTAGGTTTTCTGTAAGGTTACTTTTGGTCCTAGAAAGCTGTTT ACACCTACTAGGGAGGCATATGGGTTTTCTTCTTAATGAGACTTCACTGC TTAGGGTTCTAAAACATAAAGTTATGCTGTTTATTTGTGTTAGTCTGTAT TCTTGATTTCATTGTTTTGAAGTTAAATCTGAAATTTTATTTTACAGGAC ATTTTCTTTAACTTTGCAAACTGGTCTTCCTGCTGGCACATACTGTGATG TCATTTCTGGAGATAAAATTAATGGCAACTGCACAGGCATTAAAATCTAC GTTTCTGATGATGGCAAAGCTCATTTTTCTATTAGTAACTCTGCTGAAGA TCCATTTATTGCAATTCATGCTGAATCTAAATTGTAAAATTTAAAATTAA ATGCAAATCCGCAAAGCAATAGCTAAGTGTGTTTCTTTTCTTACATATAC AGTAATAGTTACATATCATTAATTTTAAATAAAAGCTCTAATTAGTAAAA AGAGGTTTAAGACACTTGATAGTATGAAATACAATTCCAGGTTACACATA AGTTATTTATTTTGGCAAAAGGATGACTCAAAAATTTTAAAACTAGGCAA CAATCTTTACTCATTAAGAGGTAAGACTTAGCTTTCCAAACAGTTTGTCT CCTGTCTACTCTTTTCTCTCCTTGGCATTCTACCAACAAGGCAAACCAAA TATTTCATTATTCTTCTCTATTACATGAAAAATCTGTACAAGGGAAGGAA AGCCAAATTTTACCCTTACATAGGTTTCAAAAGAATCCTTTTTCCATAGG CAACATTTACATTTTTATGCCTTTTTATAATCTTTTACCACAAACACATT TAAGTGTTCCTACACACCTTGCATGTAAATTTATTTTTAGTTGTCTTATT TACATATTTTTATGGTCAATCTTAGCAATTTTTAACTTTAATGTAAACCT GGTAAGTTGTTTTAATTATGTACTAGATGCAGATAAAGTCTGACTTTTTC CATTCTAGTTAGGGCATGGTTAATTTCATATGTCCCCAGGCCTTACCAAG TTGTAAAGTAGGCAGCCTACAACCTTGAAATATTTAGCAAGCCTTTTATC TAATTTATGTGATTTAAACCTGCTATTTACATATTGATGATATTTGCATT TTCCAATTTGATCTTTAAAACAGTTTTTATTTCTTAGAGTTTAAAAACAC ATAAACTAAAAGGCATTACGGTTTTAACTTTCCTCTAAAATATTTGATTT AAGTGCTTATTTTTATTTAAGGCAATCAATTGGTCCTCGTTACAGACATC ACACACAACACATATATTGCTACACAGACAAACAGAAGAAGATCCAGTAG CTCTAAGATTTCTTCTCGTCCCATTTCCTAATTGCATTACTGGCTTCCCA GTAGAGCCCTTTAAGAACAGGGATAGCAAACCACGAAGTTTCTAGGGCCT AATCAACTTGTATAGCTGTAAGACAAAAACAGATTTTGAGCAGGATTGAT CAGCCTCTAGATTCTGGGATTCCATGAGGAAAACAGAGGTTTCTCCCAAA ATGGAATCCATCATGCATTTTCTGTTTTTCCCAAAACGTTTCAGGCCACC AGAAGTTATCTTGTGTGCATTAAGAGTGGAAAGACAGAGTGGAGAACAGT AATTCAGTCAATGGAAAAGTTCTTTTCAAGAAAAACACGATCCAAGAAGA CAAAAACATGCAGGTCTTTTAAATATACCTATAACTTGAATATCCACTTT TAATCAAGCTCAGCACCCTTTCAGAAAATCCTTTGACATCTTCTGTTTCC TGACTTTAGCTAAATCAAGCAGGTAATATTTCTGGCTTTTGAATTTTACC AAAGGTAACATCACAGGGGAAACTAAAAACTCTCCGTTAGGTTATAAGTT CACCGTTAGTATACAAGATATTTTATAAGTGGTGGTAAGCAGCTTTTACC AGATCTAGAACCTTTAAAGTCAGTTGAGAGAAAGGAAGATTTCAGAAAGG CAGTTAGAGTTTTTCATGGCGGAGCACGAGATGATTAAACGTCACACAGT TGTTAACTGGAAAGTATTCATCACCCAGGCTGGGATTGAACCTGGGTCAC CATTGTAAAAAGGCAACGGCTGAAAAGTGGTACTACCACATGGTTACAGG TTATGCTTAAGGACATAAAACAAGTCGGAGACATGCAGCAAAGTTTGTTA CTGACCAGTTTATGAGGGTGTCTTGAACAGTGAGCTCAAGGAGTCTCAGG CCTGGATTCCATTCCAAGGTACCCTCTGTCTGACTTTTTCTTCTATTTTC TCTCCTTTTCCTGAGCCTCCTCCTAGTACGTCTTATGAAAGACTGAGGTG GCTACTCTTAGAAGGTTTTCTAAGGTGCCTTCTAGTCCTATAGCCTGTTT CTGTAGCTTCCTTCAAATATCAGGAGCTGCTTGAGTAAACCTGTCTTTCA AGATGAGCTGTCCCTCAATTGAATTACGAGATAGGGAAGCATGTTTTGCC AAAGTCTCTCTCAGCCTTTATAAAAAGGCTGAGGGATTTTCATCTGGGTT TTGATCTATCATGGATAGCTTAGAGTAGTTAACAGGTTTGGCTCTGGTCC CCTGTAAGACTTCTACCGTATACATCTGAAAGTGTTTCTATTTTTCAATC ATCTATGGGCTTAGTAGAGTTCCAATTAGAGTTTTCAAGGGATACTGCCT CTTTTCCTACTGGGAATGGGGATTCTGCCTGTTTCTCACCCTCTTTCCCT TTTTGACTGGCTATAGGAAACATGCTGCTCATCTCTGATTTTTTCTGCTA CCTGTAGGGCTGCCTGTCTCTCAACAGCAGTTAGGGTTTCAGAGTAACAT AACATCCTTCTAGGAGAGTTTAAATACTTGGGTTATATCCTGGAAGGCCT CTATACATGAGAGAAGTTGGCACTTGCCCAGAGCGAACTTCAGGCTCTGA AGTCTAAAGAATAACTCAAGGGGAATGCAGGCTTGAAGATGGGGTGTTAC CCATGCATAAAAAGAGGGGAGTAGAAGGTGTCCCTTAGTCTCCTTTCAAC TTTTGAAGTGACCCAGGTTGAAGAGAAAGATTACAGGGGTGTCCCTCTTC TCTTTCCTCCCATCTCCTTTGGGTCCTGGCAACCATCATAGGTGCAGCCC ATGGATGCAAGCATGAATTGCACCCATGTATCTGGAGGTGCTAGTTGGCA GGGGTAGTCATGCTTACCAGCACAATGCCTCATCTCACTGCCCTTCTGGG TTCCTAGGCCTCCCAGGAGATTGTACAGTAGATAAAGTTGGGTGAGACAC TTTAACAGAGGGAGTGTTTTAACCCTATTCCTGCTTCCTCTAGCTATGGC CCTGGAAAAGCAGTGCATTCCCAGAAAATTTTACCCATTGCCTTTTAAAC ACAAAATCCCCTTTCTGATTAAATGCCAATGTTGTTGGAAGCAGAACAGG TGCCTCAAAAGAACATATGGATTTAATGGCTGTCCTCCTTCTGATGGGAA CAGCACTGAGGCTAGAATTTGTCTCTCAAGGGTGGCTTCCTCCCAACTGT TGAATGCGGAGTTTTTTTCCCTACAAATGGGGCATAGAGTCTGCTTGCTG ACAGAGGAACACAAAAGTGGAAGAAATCTGGGTATTAGAGGTTTTTGGCA AAGGGCCAACAAGACTCTATGCAGAAAAAAATCCTATCTCATGAGGTGGT GCTGTAGGTTTTGAAAATTTAGGTAAAATCTGTGACTCTAAATATTGATT AAAAATCTTAAATCAATATTTGAAAGTTCTTAAATATGGATTTGAGTTTC TTAAAGTAGTCAAACTTGTTAACTTCTGTCCCTAAGAGATCTAAATTCCT ATTTTAAATGAAATTCAATTAGCTACATGTCTACAAGAAAAGGCATATAT TACTCTTTTATTCAGATCACTCTCGTAAAAAAATTACCTGAGTAGCATCA TTGTAGTTCTCGATATCTCCACTTCCAGTTTTACATTTACCATCATTGAA ATCCCATCCAGAATATGGGACTGCTGGAAAGTCCCTACTTCCAGGGTTGA AGTAACTTCCACAGGTACTGCTTGTTCCTGCACTCACAGCGTTACCACAC ATATGATTAATTACAGCATCCACATAAATACGAACCTAGAAAACAAAGTT TCTACTTCAGTGTGACTTACAGAGAGGTAGAAATTTAAAGCATTATTGAT GCAAGTTTATAGTATGTTAATAAAACTCCAAAATATTTCATGATATCTTA TAATTATTTTCCTACAAGATCTAATTCCTATCTCTAGTGTTCTTACTTTC CCTACCTCACTATGTTGTAAAAGTTAAGAAGCTATGATTCATAACAGCAT TTTTACAGAAGAGCTGAGTCTTTTTGGGCAGTGCCTCTAAGGTAAAGGTG TAATCACAGCCTCAAGAAAGTATCCGTAAAAAGGAATCAAATAGAACAAA AGGAAGTTTTCCTACTTATATACAGCTGAAACTCATTTCATTAAAGGAAC AGAATAATTTTATGTGGGAAATATTTTCACCTTTGAGTGATGTTCTGACA GATGAAAGATTTGGGGGTACAAAAATAGAAGACTGTATTATGGCAAGGAT ACAAATTTTCTAAATTGGGATAAATACCCTACTTCCAAAAAACCAAAAGC CCAATAAAACTCAATGCCAGACAAGTATAAAATAATTATAAAAAAGATTA CAATAAAAAAAGTGAAACTGCATTGATATCCATGTAAGAATTTTTAAAGG CAGTTTTTATAATCATAAATAAAATATATTATAAAATTGCCTTAAAAAGA AATTATGTAATCATCTAGTTATGTTCTGCTGCACATCTTAAACCAGGTAA ACAAAAAATGCAAACACTATTCCATTGGAAAGAAAACAATTTATTATATC TGAGGAAAGTCATTACAATACATGTAATATATTTCCAATTTACTGATTTA AAGGCGTATGGATTTAATTTTTAAATACACTTTCAAAGCTGTTATGCACA GTTCCATAGTCCAGGTGGTCAATTTCTTCTTCTCAAAGTTGCAAAGCACT TGAAGGACATGGGAATCCAAAGAAACCTAAAAACATCATAAAAGCCCATT AAAAATAGTAAGTATAACACAGGTCATTAGTTTAAAAATAACTGAGAGCT GAACCATTTATATTTAGAAAATTAGTGAATCATGTCAGTTTAACAAAATT TATGTAAATGAACTGCTTATAAAGAAACTGATTTATAACATTTACAAAAT CATTTCAACTATGCCTATAGAAAAATAATTACATTTTCAATATCTATAGG TTTTGTACTTTTAAGGTGATAATAACCAAATTTTCAATTGTTTTCATAGA ACTAAGAATAGTATCAGATTTTTCAACAAAGAAACACAGAGGCGCCAACC CTTTATTTTCCTAGTTATTAA	T T	1	a0000 a0000	1	HG03492.hp1 HG03492.hp1	exon_loss_variant	HIGH	c.513+194_5034del c.513+194_5034del		AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	5/11				chr1	103658184
chr1:103658483	G G	C C	1	a0005 a0005	1	HG00140.hp1 HG00140.hp1	missense_variant	MODERATE	c.557G>C c.557G>C	p.Gly186Ala p.Gly186Ala	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	5/11	772/1785	557/1536	186/511	chr1	103658483
chr1:103658557	A A	C C	2	a0009 a0010 a0009 a0010	2	HG01934.hp1 HG02965.hp2 HG01934.hp1 HG02965.hp2	missense_variant	MODERATE	c.631A>C c.631A>C	p.Ile211Leu p.Ile211Leu	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	5/11	846/1785	631/1536	211/511	chr1	103658557
chr1:103660629	C C	T T	1	a0009 a0009	1	HG01934.hp1 HG01934.hp1	stop_gained	HIGH	c.1054C>T c.1054C>T	p.Arg352* p.Arg352*	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/11	1269/1785	1054/1536	352/511	chr1	103660629
chr1:103662765	C C	T T	1	a0006 a0006	1	HG02451.hp2 HG02451.hp2	missense_variant	MODERATE	c.1210C>T c.1210C>T	p.Arg404Cys p.Arg404Cys	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	9/11	1425/1785	1210/1536	404/511	chr1	103662765
chr1:103662771	A A	G G	2	a0004 a0008 a0004 a0008	2	NA18940.hp2 NA18957.hp1 NA18940.hp2 NA18957.hp1	missense_variant	MODERATE	c.1216A>G c.1216A>G	p.Ile406Val p.Ile406Val	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	9/11	1431/1785	1216/1536	406/511	chr1	103662771
chr1:103662928	T T	G G	1	a0010 a0010	1	HG02965.hp2 HG02965.hp2	missense_variant	MODERATE	c.1263T>G c.1263T>G	p.Phe421Leu p.Phe421Leu	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	10/11	1478/1785	1263/1536	421/511	chr1	103662928
chr1:103662974	G G	A A	1	a0007 a0007	1	NA18986.hp1 NA18986.hp1	missense_variant	MODERATE	c.1309G>A c.1309G>A	p.Gly437Arg p.Gly437Arg	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	10/11	1524/1785	1309/1536	437/511	chr1	103662974
chr1:103664434	G G	A A	1	a0002 a0002	2	HG02523.hp2 NA18962.hp1 HG02523.hp2 NA18962.hp1	missense_variant	MODERATE	c.1450G>A c.1450G>A	p.Val484Ile p.Val484Ile	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	11/11	1665/1785	1450/1536	484/511	chr1	103664434

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr1:103657838	T T	C C	1	a0000c0007 a0000c0007	1	HG03492.hp1 HG03492.hp1	synonymous_variant	LOW	c.360T>C c.360T>C	p.Asn120Asn p.Asn120Asn	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	4/11	575/1785	360/1536	120/511	chr1	103657838
chr1:103657931	T T	C C	1	a0000c0007 a0000c0007	1	HG03492.hp1 HG03492.hp1	synonymous_variant	LOW	c.453T>C c.453T>C	p.Phe151Phe p.Phe151Phe	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	4/11	668/1785	453/1536	151/511	chr1	103657931
chr1:103657976	T T	C C	1	a0000c0007 a0000c0007	1	HG03492.hp1 HG03492.hp1	synonymous_variant	LOW	c.498T>C c.498T>C	p.Tyr166Tyr p.Tyr166Tyr	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	4/11	713/1785	498/1536	166/511	chr1	103657976
chr1:103660444	C C	T T	1	a0001c0004 a0001c0004	2	HG03491.hp1 NA20905.hp1 HG03491.hp1 NA20905.hp1	synonymous_variant	LOW	c.963C>T c.963C>T	p.Gly321Gly p.Gly321Gly	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	7/11	1178/1785	963/1536	321/511	chr1	103660444
chr1:103662737	C C	T T	1	a0001c0003 a0001c0003	2	NA19011.hp2 NA19072.hp2 NA19011.hp2 NA19072.hp2	synonymous_variant	LOW	c.1182C>T c.1182C>T	p.Gly394Gly p.Gly394Gly	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	9/11	1397/1785	1182/1536	394/511	chr1	103662737
chr1:103662749	C C	T T	1	a0001c0013 a0001c0013	1	HG02258.hp2 HG02258.hp2	synonymous_variant	LOW	c.1194C>T c.1194C>T	p.Val398Val p.Val398Val	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	9/11	1409/1785	1194/1536	398/511	chr1	103662749
chr1:103664508	A A	G G	1	a0001c0010 a0001c0010	1	HG00642.hp1 HG00642.hp1	synonymous_variant	LOW	c.1524A>G c.1524A>G	p.Glu508Glu p.Glu508Glu	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	11/11	1739/1785	1524/1536	508/511	chr1	103664508

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr1:103655866	T T	C C	1	a0001c0001t0002 a0001c0001t0002	1	HG01934.hp2 HG01934.hp2	5_prime_UTR_variant	MODIFIER	c.-109T>C c.-109T>C	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	1/11	465	chr1	103655866
chr1:103655886	G G	A A	1	a0001c0001t0003 a0001c0001t0003	1	HG02717.hp2 HG02717.hp2	5_prime_UTR_variant	MODIFIER	c.-89G>A c.-89G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	1/11	445	chr1	103655886
chr1:103656294	T T	C C	1	a0001c0001t0004 a0001c0001t0004	1	NA19002.hp2 NA19002.hp2	5_prime_UTR_variant	MODIFIER	c.-37T>C c.-37T>C	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	2/11	37	chr1	103656294

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr1:103656089	C C	CA CA	47	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0008 others(44): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0071 a0001c0001t0002g0045 a0001c0003t0001g0004 a0002c0002t0001g0055 a0003c0017t0001g0001 a0004c0016t0001g0010 a0005c0008t0001g0001 a0006c0012t0001g0043 a0008c0011t0001g0010 a0009c0015t0001g0069 a0010c0014t0001g0070 a0012c0005t0001g0065	91	HG00140.hp1 HG00544.hp2 HG00558.hp2 others(88): Show HG00140.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00609.hp2 HG00735.hp2 HG00738.hp2 HG01106.hp2 HG01167.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01261.hp2 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01934.hp1 HG01934.hp2 HG01952.hp1 HG01981.hp1 HG01993.hp2 HG02055.hp2 HG02083.hp2 HG02109.hp2 HG02148.hp1 HG02280.hp2 HG02300.hp1 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02572.hp1 HG02602.hp1 HG02622.hp2 HG02717.hp1 HG02738.hp1 HG02738.hp2 HG02818.hp2 HG02965.hp1 HG02965.hp2 HG03139.hp2 HG03486.hp1 HG03486.hp2 HG03492.hp2 HG03516.hp2 HG03654.hp2 HG03831.hp1 HG03834.hp1 HG03927.hp1 HG04115.hp1 HG04228.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp2 NA18944.hp2 NA18948.hp2 NA18950.hp2 NA18951.hp2 NA18957.hp1 NA18961.hp2 NA18963.hp2 NA18973.hp1 NA18975.hp1 NA18975.hp2 NA18981.hp2 NA18985.hp1 NA18988.hp1 NA18988.hp2 NA18991.hp2 NA18992.hp1 NA19000.hp2 NA19003.hp2 NA19011.hp2 NA19059.hp1 NA19060.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp2 NA19070.hp2 NA19072.hp2 NA19084.hp1 NA19085.hp2 NA19086.hp2 NA19089.hp1 NA20300.hp2	intron_variant	MODIFIER	c.-47+177dupA c.-47+177dupA	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	1/10	INFO_REALIGN_3_PRIME	chr1	103656089
chr1:103656089	C C	CAA CAA	12	a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0020 others(9): Show a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0002c0002t0001g0039	18	HG00140.hp2 HG00642.hp2 HG00738.hp1 others(15): Show HG00140.hp2 HG00642.hp2 HG00738.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01884.hp2 HG02055.hp1 HG02451.hp1 HG02559.hp1 HG02572.hp2 HG02630.hp1 HG03688.hp1 HG03688.hp2 NA18962.hp1 NA19058.hp1 NA19080.hp2 NA19240.hp1	intron_variant	MODIFIER	c.-47+176_-47+177dup others(2): Show c.-47+176_-47+177dupAA	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	1/10	INFO_REALIGN_3_PRIME	chr1	103656089
chr1:103656090	A A	C C	2	a0001c0001t0001g0002 a0001c0001t0001g0015 a0001c0001t0001g0002 a0001c0001t0001g0015	20	HG01070.hp2 HG02080.hp1 HG03017.hp2 others(17): Show HG01070.hp2 HG02080.hp1 HG03017.hp2 HG03239.hp2 HG03704.hp1 HG03831.hp2 HG03834.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp2 NA18951.hp1 NA18954.hp1 NA18970.hp2 NA18981.hp1 NA19004.hp1 NA19011.hp1 NA19070.hp1 NA19077.hp1 NA19086.hp1 NA19091.hp2	intron_variant	MODIFIER	c.-47+162A>C c.-47+162A>C	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	1/10		chr1	103656090
chr1:103656202	T T	A A	1	a0001c0001t0001g0072 a0001c0001t0001g0072	1	NA18950.hp1 NA18950.hp1	intron_variant	MODIFIER	c.-46-83T>A c.-46-83T>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	1/10		chr1	103656202
chr1:103656536	G G	A A	1	a0006c0012t0001g0043 a0006c0012t0001g0043	1	HG02451.hp2 HG02451.hp2	intron_variant	MODIFIER	c.168+38G>A c.168+38G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	2/10		chr1	103656536
chr1:103657316	T T	C C	1	a0001c0001t0001g0044 a0001c0001t0001g0044	1	HG02055.hp2 HG02055.hp2	intron_variant	MODIFIER	c.315+326T>C c.315+326T>C	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	3/10		chr1	103657316
chr1:103657363	G G	T T	1	a0001c0001t0001g0071 a0001c0001t0001g0071	1	NA18522.hp1 NA18522.hp1	intron_variant	MODIFIER	c.315+373G>T c.315+373G>T	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	3/10		chr1	103657363
chr1:103657411	G G	C C	1	a0001c0001t0002g0045 a0001c0001t0002g0045	1	HG01934.hp2 HG01934.hp2	intron_variant	MODIFIER	c.316-383G>C c.316-383G>C	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	3/10		chr1	103657411
chr1:103657514	G G	T T	5	a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0042 others(2): Show a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0042 a0009c0015t0001g0069 a0010c0014t0001g0070	9	HG00738.hp1 HG01070.hp1 HG01884.hp2 others(6): Show HG00738.hp1 HG01070.hp1 HG01884.hp2 HG01934.hp1 HG02055.hp1 HG02572.hp2 HG02965.hp2 HG03688.hp1 HG03688.hp2	intron_variant	MODIFIER	c.316-280G>T c.316-280G>T	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	3/10		chr1	103657514
chr1:103657598	G G	A A	9	a0001c0001t0001g0003 a0001c0001t0001g0015 a0001c0001t0001g0016 others(6): Show a0001c0001t0001g0003 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0035 a0001c0001t0001g0042 a0001c0001t0001g0073 a0001c0001t0001g0074 a0009c0015t0001g0069	30	HG00544.hp1 HG00642.hp2 HG00738.hp1 others(27): Show HG00544.hp1 HG00642.hp2 HG00738.hp1 HG01070.hp1 HG01070.hp2 HG01884.hp2 HG01934.hp1 HG02055.hp1 HG02280.hp1 HG02300.hp2 HG02572.hp2 HG02735.hp1 HG03239.hp1 HG03239.hp2 HG03516.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04199.hp1 NA18961.hp1 NA18977.hp2 NA19084.hp2 NA19240.hp2 NA20905.hp2	intron_variant	MODIFIER	c.316-196G>A c.316-196G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	3/10		chr1	103657598
chr1:103657639	C C	G G	1	a0001c0001t0001g0093 a0001c0001t0001g0093	1	NA18944.hp1 NA18944.hp1	intron_variant	MODIFIER	c.316-155C>G c.316-155C>G	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	3/10		chr1	103657639
chr1:103657679	G G	A A	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.316-115G>A c.316-115G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	3/10		chr1	103657679
chr1:103657687	G G	A A	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.316-107G>A c.316-107G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	3/10		chr1	103657687
chr1:103657704	A A	G G	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.316-90A>G c.316-90A>G	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	3/10		chr1	103657704
chr1:103657713	G G	A A	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.316-81G>A c.316-81G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	3/10		chr1	103657713
chr1:103657716	C C	T T	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.316-78C>T c.316-78C>T	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	3/10		chr1	103657716
chr1:103657727	T T	G G	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.316-67T>G c.316-67T>G	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	3/10		chr1	103657727
chr1:103657728	A A	C C	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.316-66A>C c.316-66A>C	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	3/10		chr1	103657728
chr1:103657738	T T	G G	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.316-56T>G c.316-56T>G	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	3/10		chr1	103657738
chr1:103657751	G G	A A	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.316-43G>A c.316-43G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	3/10		chr1	103657751
chr1:103657774	T T	G G	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.316-20T>G c.316-20T>G	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	3/10		chr1	103657774
chr1:103658005	G G	A A	2	a0001c0001t0001g0076 a0001c0001t0004g0077 a0001c0001t0001g0076 a0001c0001t0004g0077	2	HG02135.hp2 NA19002.hp2 HG02135.hp2 NA19002.hp2	intron_variant	MODIFIER	c.513+14G>A c.513+14G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	4/10		chr1	103658005
chr1:103658022	G G	A A	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.513+31G>A c.513+31G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	4/10		chr1	103658022
chr1:103658027	G G	A A	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.513+36G>A c.513+36G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	4/10		chr1	103658027
chr1:103658041	G G	C C	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.513+50G>C c.513+50G>C	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	4/10		chr1	103658041
chr1:103658065	C C	T T	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.513+74C>T c.513+74C>T	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	4/10		chr1	103658065
chr1:103658069	G G	A A	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.513+78G>A c.513+78G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	4/10		chr1	103658069
chr1:103658072	G G	T T	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.513+81G>T c.513+81G>T	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	4/10		chr1	103658072
chr1:103658073	T T	A A	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.513+82T>A c.513+82T>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	4/10		chr1	103658073
chr1:103658079	T T	G G	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.513+88T>G c.513+88T>G	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	4/10		chr1	103658079
chr1:103658104	G G	A A	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.513+113G>A c.513+113G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	4/10		chr1	103658104
chr1:103658147	G G	A A	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.513+156G>A c.513+156G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	4/10		chr1	103658147
chr1:103658149	A A	G G	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.513+158A>G c.513+158A>G	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	4/10		chr1	103658149
chr1:103658153	C C	T T	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.513+162C>T c.513+162C>T	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	4/10		chr1	103658153
chr1:103658156	T T	C C	1	a0000c0007t0005g0075 a0000c0007t0005g0075	1	HG03492.hp1 HG03492.hp1	intron_variant	MODIFIER	c.513+165T>C c.513+165T>C	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	4/10		chr1	103658156
chr1:103658368	T T	C C	1	a0001c0001t0001g0078 a0001c0001t0001g0078	1	HG03209.hp1 HG03209.hp1	intron_variant	MODIFIER	c.514-72T>C c.514-72T>C	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	4/10		chr1	103658368
chr1:103658726	G G	A A	24	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0009 others(21): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0015 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0076 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0002g0045 a0001c0001t0003g0011 a0001c0010t0001g0009	66	HG00544.hp1 HG00558.hp2 HG00642.hp1 others(63): Show HG00544.hp1 HG00558.hp2 HG00642.hp1 HG00642.hp2 HG01069.hp2 HG01070.hp2 HG01934.hp2 HG02055.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02135.hp2 HG02280.hp1 HG02300.hp2 HG02559.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02717.hp2 HG02735.hp1 HG02818.hp1 HG03017.hp2 HG03139.hp1 HG03139.hp2 HG03239.hp1 HG03239.hp2 HG03486.hp1 HG03516.hp1 HG03654.hp1 HG03704.hp1 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18948.hp1 NA18951.hp1 NA18954.hp1 NA18961.hp1 NA18970.hp2 NA18973.hp2 NA18977.hp2 NA18981.hp1 NA18988.hp1 NA19000.hp1 NA19004.hp1 NA19004.hp2 NA19011.hp1 NA19068.hp1 NA19070.hp1 NA19077.hp1 NA19084.hp2 NA19086.hp1 NA19091.hp2 NA19240.hp2 NA20905.hp2	intron_variant	MODIFIER	c.744+56G>A c.744+56G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	5/10		chr1	103658726
chr1:103658874	C C	G G	1	a0001c0001t0001g0068 a0001c0001t0001g0068	1	NA19085.hp2 NA19085.hp2	intron_variant	MODIFIER	c.744+204C>G c.744+204C>G	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	5/10		chr1	103658874
chr1:103658929	CA CA	C C	4	a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0042 others(1): Show a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0042 a0009c0015t0001g0069	8	HG00738.hp1 HG01070.hp1 HG01884.hp2 others(5): Show HG00738.hp1 HG01070.hp1 HG01884.hp2 HG01934.hp1 HG02055.hp1 HG02572.hp2 HG03688.hp1 HG03688.hp2	intron_variant	MODIFIER	c.744+266delA c.744+266delA	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	5/10	INFO_REALIGN_3_PRIME	chr1	103658929
chr1:103658958	G G	A A	1	a0001c0001t0001g0046 a0001c0001t0001g0046	1	HG02622.hp2 HG02622.hp2	intron_variant	MODIFIER	c.744+288G>A c.744+288G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	5/10		chr1	103658958
chr1:103659271	G G	T T	1	a0001c0001t0001g0042 a0001c0001t0001g0042	1	HG00738.hp1 HG00738.hp1	intron_variant	MODIFIER	c.745-139G>T c.745-139G>T	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	5/10		chr1	103659271
chr1:103659367	A A	C C	1	a0001c0001t0001g0067 a0001c0001t0001g0067	1	NA19086.hp2 NA19086.hp2	intron_variant	MODIFIER	c.745-43A>C c.745-43A>C	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	5/10		chr1	103659367
chr1:103659384	G G	GT GT	9	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0030 others(6): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0030 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0092 a0003c0017t0001g0001 a0005c0008t0001g0001 a0012c0005t0001g0065	34	HG00140.hp1 HG00597.hp2 HG00609.hp2 others(31): Show HG00140.hp1 HG00597.hp2 HG00609.hp2 HG00738.hp2 HG01167.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01981.hp1 HG02135.hp1 HG02602.hp1 HG02717.hp1 HG03491.hp2 HG03492.hp2 HG03654.hp2 HG03834.hp1 HG03927.hp1 NA18939.hp1 NA18951.hp2 NA18954.hp2 NA18961.hp2 NA18970.hp1 NA18973.hp1 NA18977.hp1 NA18988.hp2 NA19003.hp2 NA19006.hp2 NA19060.hp2 NA19064.hp1 NA19080.hp1 NA19086.hp2	intron_variant	MODIFIER	c.745-17dupT c.745-17dupT	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	5/10	INFO_REALIGN_3_PRIME	chr1	103659384
chr1:103660048	G G	C C	1	a0001c0001t0001g0068 a0001c0001t0001g0068	1	NA19085.hp2 NA19085.hp2	intron_variant	MODIFIER	c.879-312G>C c.879-312G>C	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	6/10		chr1	103660048
chr1:103660248	G G	T T	1	a0001c0001t0001g0081 a0001c0001t0001g0081	1	NA18973.hp2 NA18973.hp2	intron_variant	MODIFIER	c.879-112G>T c.879-112G>T	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	6/10		chr1	103660248
chr1:103660284	A A	G G	1	a0001c0001t0001g0074 a0001c0001t0001g0074	1	NA19240.hp2 NA19240.hp2	intron_variant	MODIFIER	c.879-76A>G c.879-76A>G	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	6/10		chr1	103660284
chr1:103660298	A A	T T	1	a0001c0001t0001g0074 a0001c0001t0001g0074	1	NA19240.hp2 NA19240.hp2	intron_variant	MODIFIER	c.879-62A>T c.879-62A>T	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	6/10		chr1	103660298
chr1:103660299	G G	A A	1	a0001c0001t0001g0074 a0001c0001t0001g0074	1	NA19240.hp2 NA19240.hp2	intron_variant	MODIFIER	c.879-61G>A c.879-61G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	6/10		chr1	103660299
chr1:103660486	A A	G G	55	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0009 others(52): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0023 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0093 a0001c0001t0002g0045 a0001c0001t0003g0011 a0001c0010t0001g0009 a0001c0013t0001g0019 a0004c0016t0001g0010 a0008c0011t0001g0010 a0009c0015t0001g0069 a0010c0014t0001g0070 a0011c0006t0001g0034	112	HG00140.hp2 HG00408.hp2 HG00544.hp1 others(109): Show HG00140.hp2 HG00408.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp2 HG00738.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01884.hp1 HG01884.hp2 HG01934.hp1 HG01934.hp2 HG01993.hp1 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02148.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp1 HG02523.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp2 HG02735.hp1 HG02818.hp1 HG02965.hp2 HG03017.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03239.hp2 HG03486.hp1 HG03516.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 NA18522.hp1 NA18522.hp2 NA18940.hp2 NA18944.hp1 NA18944.hp2 NA18948.hp1 NA18951.hp1 NA18954.hp1 NA18957.hp1 NA18961.hp1 NA18962.hp2 NA18963.hp1 NA18970.hp2 NA18973.hp2 NA18975.hp1 NA18977.hp2 NA18981.hp1 NA18981.hp2 NA18985.hp2 NA18988.hp1 NA18992.hp2 NA19000.hp1 NA19004.hp1 NA19004.hp2 NA19006.hp1 NA19011.hp1 NA19059.hp1 NA19060.hp1 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19077.hp1 NA19078.hp2 NA19084.hp1 NA19084.hp2 NA19086.hp1 NA19089.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20905.hp2	splice_region_variant&intron_variant	LOW	c.1001+4A>G c.1001+4A>G	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	7/10		chr1	103660486
chr1:103660502	AT AT	A A	36	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0009 others(33): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0023 a0001c0001t0001g0028 a0001c0001t0001g0035 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0002g0045 a0001c0001t0003g0011 a0001c0010t0001g0009 a0001c0013t0001g0019 a0009c0015t0001g0069 a0010c0014t0001g0070	84	HG00544.hp1 HG00558.hp2 HG00642.hp1 others(81): Show HG00544.hp1 HG00558.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp1 HG01070.hp1 HG01070.hp2 HG01884.hp1 HG01884.hp2 HG01934.hp1 HG01934.hp2 HG01993.hp1 HG02055.hp1 HG02055.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02148.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp2 HG02735.hp1 HG02818.hp1 HG02965.hp2 HG03017.hp2 HG03139.hp1 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03239.hp2 HG03486.hp1 HG03516.hp1 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 NA18522.hp1 NA18522.hp2 NA18948.hp1 NA18951.hp1 NA18954.hp1 NA18961.hp1 NA18970.hp2 NA18973.hp2 NA18977.hp2 NA18981.hp1 NA18988.hp1 NA18992.hp2 NA19000.hp1 NA19004.hp1 NA19004.hp2 NA19011.hp1 NA19068.hp1 NA19070.hp1 NA19077.hp1 NA19084.hp2 NA19086.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20905.hp2	intron_variant	MODIFIER	c.1001+27delT c.1001+27delT	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	7/10	INFO_REALIGN_3_PRIME	chr1	103660502
chr1:103660807	A A	G G	57	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(54): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0023 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0002g0045 a0001c0001t0003g0011 a0001c0010t0001g0009 a0001c0013t0001g0019 a0003c0017t0001g0001 a0004c0016t0001g0010 a0005c0008t0001g0001 a0008c0011t0001g0010 a0009c0015t0001g0069 a0011c0006t0001g0034 a0012c0005t0001g0065	138	HG00140.hp1 HG00408.hp2 HG00544.hp1 others(135): Show HG00140.hp1 HG00408.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01167.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01934.hp1 HG01934.hp2 HG01981.hp1 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02109.hp1 HG02135.hp1 HG02148.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp1 HG02523.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02717.hp2 HG02735.hp1 HG02818.hp1 HG03017.hp2 HG03139.hp1 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03239.hp2 HG03491.hp2 HG03492.hp2 HG03516.hp1 HG03654.hp1 HG03654.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 NA18939.hp1 NA18940.hp2 NA18944.hp1 NA18944.hp2 NA18948.hp1 NA18951.hp1 NA18951.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp1 NA18961.hp1 NA18961.hp2 NA18962.hp2 NA18963.hp1 NA18970.hp1 NA18970.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18977.hp1 NA18977.hp2 NA18981.hp1 NA18981.hp2 NA18985.hp2 NA18988.hp1 NA18988.hp2 NA18991.hp2 NA18992.hp2 NA19000.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19006.hp1 NA19006.hp2 NA19011.hp1 NA19059.hp1 NA19060.hp1 NA19060.hp2 NA19064.hp1 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19077.hp1 NA19078.hp2 NA19080.hp1 NA19084.hp1 NA19084.hp2 NA19086.hp1 NA19086.hp2 NA19089.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20905.hp2	intron_variant	MODIFIER	c.1101+131A>G c.1101+131A>G	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10		chr1	103660807
chr1:103660831	T T	C C	1	a0001c0001t0001g0035 a0001c0001t0001g0035	1	HG00642.hp2 HG00642.hp2	intron_variant	MODIFIER	c.1101+155T>C c.1101+155T>C	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10		chr1	103660831
chr1:103660912	C C	T T	16	a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0026 others(13): Show a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0038 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0060 a0001c0001t0001g0068 a0001c0001t0001g0076 a0001c0001t0001g0086 a0001c0001t0001g0091 a0001c0001t0004g0077 a0001c0003t0001g0004 a0002c0002t0001g0039 a0002c0002t0001g0055	34	HG00544.hp2 HG01106.hp2 HG01261.hp2 others(31): Show HG00544.hp2 HG01106.hp2 HG01261.hp2 HG01952.hp1 HG01993.hp2 HG02083.hp2 HG02135.hp2 HG02300.hp1 HG02523.hp2 HG02738.hp1 HG02738.hp2 HG03486.hp2 HG04115.hp1 HG04228.hp2 NA18940.hp1 NA18941.hp2 NA18950.hp2 NA18957.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp2 NA18975.hp2 NA18985.hp1 NA18992.hp1 NA19000.hp2 NA19002.hp2 NA19011.hp2 NA19063.hp2 NA19064.hp2 NA19065.hp2 NA19072.hp2 NA19080.hp2 NA19085.hp2 NA20300.hp2	intron_variant	MODIFIER	c.1101+236C>T c.1101+236C>T	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10		chr1	103660912
chr1:103660944	C C	A A	1	a0001c0001t0001g0031 a0001c0001t0001g0031	2	NA19003.hp1 NA19059.hp2 NA19003.hp1 NA19059.hp2	intron_variant	MODIFIER	c.1101+268C>A c.1101+268C>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10		chr1	103660944
chr1:103661084	C C	T T	2	a0001c0001t0001g0018 a0001c0001t0001g0053 a0001c0001t0001g0018 a0001c0001t0001g0053	4	NA18941.hp1 NA19002.hp1 NA19063.hp1 others(1): Show NA18941.hp1 NA19002.hp1 NA19063.hp1 NA19091.hp1	intron_variant	MODIFIER	c.1101+408C>T c.1101+408C>T	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10		chr1	103661084
chr1:103661113	A A	T T	19	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0016 others(16): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0028 a0001c0001t0001g0035 a0001c0001t0001g0041 a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0080 a0001c0001t0001g0088 a0001c0001t0001g0092 a0003c0017t0001g0001 a0005c0008t0001g0001 a0009c0015t0001g0069 a0010c0014t0001g0070 a0012c0005t0001g0065	48	HG00140.hp1 HG00597.hp2 HG00609.hp2 others(45): Show HG00140.hp1 HG00597.hp2 HG00609.hp2 HG00642.hp2 HG00738.hp2 HG01070.hp1 HG01167.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01934.hp1 HG02055.hp1 HG02109.hp1 HG02135.hp1 HG02280.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02630.hp1 HG02717.hp1 HG02965.hp2 HG03491.hp2 HG03492.hp2 HG03654.hp2 HG03688.hp1 HG03688.hp2 HG03834.hp1 HG03927.hp1 NA18939.hp1 NA18951.hp2 NA18954.hp2 NA18961.hp2 NA18970.hp1 NA18973.hp1 NA18977.hp1 NA18988.hp2 NA18991.hp2 NA18992.hp2 NA19006.hp2 NA19060.hp2 NA19064.hp1 NA19080.hp1 NA19086.hp2	intron_variant	MODIFIER	c.1101+437A>T c.1101+437A>T	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10		chr1	103661113
chr1:103661161	C C	T T	2	a0001c0001t0001g0048 a0001c0001t0001g0071 a0001c0001t0001g0048 a0001c0001t0001g0071	2	NA18522.hp1 NA18522.hp2 NA18522.hp1 NA18522.hp2	intron_variant	MODIFIER	c.1101+485C>T c.1101+485C>T	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10		chr1	103661161
chr1:103661228	A A	G G	1	a0001c0001t0001g0056 a0001c0001t0001g0056	1	HG02738.hp2 HG02738.hp2	intron_variant	MODIFIER	c.1101+552A>G c.1101+552A>G	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10		chr1	103661228
chr1:103661437	TTTTTAGA others(4): Show TTTTTAGATTCC	T T	6	a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0042 others(3): Show a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0042 a0001c0001t0001g0080 a0009c0015t0001g0069 a0010c0014t0001g0070	10	HG00738.hp1 HG01070.hp1 HG01884.hp2 others(7): Show HG00738.hp1 HG01070.hp1 HG01884.hp2 HG01934.hp1 HG02055.hp1 HG02109.hp1 HG02572.hp2 HG02965.hp2 HG03688.hp1 HG03688.hp2	intron_variant	MODIFIER	c.1101+765_1101+775d others(13): Show c.1101+765_1101+775delTAGATTCCTTT	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10	INFO_REALIGN_3_PRIME	chr1	103661437
chr1:103661466	C C	T T	1	a0002c0002t0001g0055 a0002c0002t0001g0055	1	HG02523.hp2 HG02523.hp2	intron_variant	MODIFIER	c.1101+790C>T c.1101+790C>T	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10		chr1	103661466
chr1:103661649	G G	T T	3	a0001c0001t0001g0051 a0001c0001t0001g0052 a0006c0012t0001g0043 a0001c0001t0001g0051 a0001c0001t0001g0052 a0006c0012t0001g0043	3	HG02451.hp2 HG02818.hp2 HG03516.hp2 HG02451.hp2 HG02818.hp2 HG03516.hp2	intron_variant	MODIFIER	c.1101+973G>T c.1101+973G>T	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10		chr1	103661649
chr1:103661789	TATGGTCA others(10): Show TATGGTCAATTTATAAAA	T T	1	a0001c0001t0001g0061 a0001c0001t0001g0061	1	NA19059.hp1 NA19059.hp1	intron_variant	MODIFIER	c.1102-866_1102-850d others(19): Show c.1102-866_1102-850delTGGTCAATTTATAAAAA	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10	INFO_REALIGN_3_PRIME	chr1	103661789
chr1:103661802	TA TA	T T	59	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0006 others(56): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0038 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0071 a0001c0001t0001g0076 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0088 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0002g0045 a0001c0001t0003g0011 a0001c0001t0004g0077 a0001c0003t0001g0004 a0001c0013t0001g0019 a0002c0002t0001g0039 a0002c0002t0001g0055 a0003c0017t0001g0001 a0005c0008t0001g0001 a0006c0012t0001g0043 a0009c0015t0001g0069 a0010c0014t0001g0070 a0012c0005t0001g0065	115	HG00140.hp1 HG00544.hp2 HG00558.hp2 others(112): Show HG00140.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp2 HG00609.hp2 HG00642.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp1 HG01106.hp2 HG01167.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01261.hp2 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01934.hp1 HG01934.hp2 HG01952.hp1 HG01981.hp1 HG01993.hp2 HG02055.hp1 HG02055.hp2 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02717.hp2 HG02738.hp2 HG02818.hp1 HG02818.hp2 HG02965.hp1 HG02965.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp2 HG03492.hp2 HG03516.hp2 HG03654.hp2 HG03688.hp1 HG03688.hp2 HG03834.hp1 HG03927.hp1 HG04115.hp1 HG04228.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18940.hp1 NA18941.hp2 NA18944.hp2 NA18950.hp2 NA18951.hp2 NA18954.hp2 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp2 NA18970.hp1 NA18973.hp1 NA18975.hp2 NA18977.hp1 NA18985.hp1 NA18988.hp1 NA18988.hp2 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp2 NA19003.hp2 NA19006.hp2 NA19011.hp2 NA19060.hp2 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp2 NA19072.hp2 NA19080.hp1 NA19080.hp2 NA19085.hp2 NA19086.hp2 NA19240.hp1 NA20300.hp2	intron_variant	MODIFIER	c.1102-845delA c.1102-845delA	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10	INFO_REALIGN_3_PRIME	chr1	103661802
chr1:103661812	A A	T T	2	a0001c0001t0001g0020 a0001c0001t0001g0040 a0001c0001t0001g0020 a0001c0001t0001g0040	3	HG02451.hp1 HG02559.hp1 NA19240.hp1 HG02451.hp1 HG02559.hp1 NA19240.hp1	intron_variant	MODIFIER	c.1102-845A>T c.1102-845A>T	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10		chr1	103661812
chr1:103661841	T T	A A	1	a0001c0001t0001g0082 a0001c0001t0001g0082	1	HG03017.hp1 HG03017.hp1	intron_variant	MODIFIER	c.1102-816T>A c.1102-816T>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10		chr1	103661841
chr1:103661946	T T	C C	46	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(43): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0092 a0001c0001t0002g0045 a0001c0010t0001g0009 a0003c0017t0001g0001 a0005c0008t0001g0001 a0006c0012t0001g0043 a0009c0015t0001g0069 a0010c0014t0001g0070 a0012c0005t0001g0065	117	HG00140.hp1 HG00544.hp1 HG00558.hp2 others(114): Show HG00140.hp1 HG00544.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp2 HG00642.hp1 HG00642.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01167.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01934.hp1 HG01934.hp2 HG01981.hp1 HG02055.hp1 HG02055.hp2 HG02074.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02135.hp1 HG02148.hp1 HG02280.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02602.hp1 HG02622.hp2 HG02630.hp1 HG02717.hp1 HG02735.hp1 HG02818.hp2 HG02965.hp1 HG02965.hp2 HG03017.hp2 HG03139.hp2 HG03209.hp1 HG03239.hp1 HG03239.hp2 HG03486.hp1 HG03491.hp2 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG03654.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18948.hp1 NA18951.hp1 NA18951.hp2 NA18954.hp1 NA18954.hp2 NA18961.hp1 NA18961.hp2 NA18970.hp1 NA18970.hp2 NA18973.hp1 NA18973.hp2 NA18977.hp1 NA18977.hp2 NA18981.hp1 NA18988.hp1 NA18988.hp2 NA18991.hp2 NA19000.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19006.hp2 NA19011.hp1 NA19060.hp2 NA19064.hp1 NA19068.hp1 NA19070.hp1 NA19077.hp1 NA19080.hp1 NA19084.hp2 NA19086.hp1 NA19086.hp2 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20905.hp2	intron_variant	MODIFIER	c.1102-711T>C c.1102-711T>C	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10		chr1	103661946
chr1:103661988	A A	G G	10	a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0028 others(7): Show a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0028 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0078 a0006c0012t0001g0043	14	HG00738.hp1 HG01070.hp1 HG01884.hp1 others(11): Show HG00738.hp1 HG01070.hp1 HG01884.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp1 HG02630.hp1 HG02818.hp2 HG03209.hp1 HG03516.hp2 HG03688.hp1 HG03688.hp2 NA19240.hp1	intron_variant	MODIFIER	c.1102-669A>G c.1102-669A>G	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10		chr1	103661988
chr1:103662158	C C	T T	5	a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0035 others(2): Show a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0035 a0001c0001t0001g0080 a0001c0001t0002g0045	9	HG00642.hp2 HG01070.hp1 HG01884.hp2 others(6): Show HG00642.hp2 HG01070.hp1 HG01884.hp2 HG01934.hp2 HG02055.hp1 HG02109.hp1 HG02572.hp2 HG03688.hp1 HG03688.hp2	intron_variant	MODIFIER	c.1102-499C>T c.1102-499C>T	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10		chr1	103662158
chr1:103662161	C C	A A	8	a0001c0001t0001g0004 a0001c0001t0001g0033 a0001c0001t0001g0038 others(5): Show a0001c0001t0001g0004 a0001c0001t0001g0033 a0001c0001t0001g0038 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0068 a0001c0001t0001g0083 a0001c0003t0001g0004	19	HG01106.hp2 HG01261.hp2 HG02300.hp1 others(16): Show HG01106.hp2 HG01261.hp2 HG02300.hp1 NA18941.hp2 NA18963.hp1 NA18963.hp2 NA18975.hp2 NA19000.hp2 NA19011.hp2 NA19059.hp1 NA19064.hp2 NA19065.hp2 NA19072.hp2 NA19078.hp2 NA19080.hp2 NA19085.hp2 NA19089.hp1 NA19089.hp2 NA20300.hp2	intron_variant	MODIFIER	c.1102-496C>A c.1102-496C>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10		chr1	103662161
chr1:103662240	T T	TA TA	42	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0008 others(39): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0014 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0038 a0001c0001t0001g0050 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0064 a0001c0001t0001g0068 a0001c0001t0001g0076 a0001c0001t0001g0082 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0093 a0001c0001t0004g0077 a0001c0003t0001g0004 a0001c0004t0001g0005 a0001c0013t0001g0019 a0002c0002t0001g0039 a0002c0002t0001g0055 a0004c0016t0001g0010 a0008c0011t0001g0010 a0011c0006t0001g0034 a0012c0005t0001g0065	79	HG00408.hp2 HG00544.hp2 HG00558.hp1 others(76): Show HG00408.hp2 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00735.hp2 HG01106.hp2 HG01167.hp1 HG01255.hp1 HG01261.hp2 HG01516.hp2 HG01952.hp1 HG01952.hp2 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02074.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02135.hp2 HG02148.hp2 HG02258.hp1 HG02258.hp2 HG02300.hp1 HG02523.hp2 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02738.hp1 HG02738.hp2 HG03017.hp1 HG03209.hp2 HG03486.hp2 HG03491.hp1 HG03831.hp1 HG04115.hp1 HG04228.hp1 HG04228.hp2 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18944.hp1 NA18944.hp2 NA18950.hp2 NA18957.hp1 NA18957.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18975.hp1 NA18975.hp2 NA18981.hp2 NA18985.hp1 NA18985.hp2 NA18992.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19006.hp1 NA19011.hp2 NA19059.hp1 NA19060.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp2 NA19065.hp2 NA19072.hp1 NA19072.hp2 NA19078.hp2 NA19080.hp2 NA19084.hp1 NA19085.hp2 NA19089.hp1 NA19091.hp1 NA20300.hp2 NA20905.hp1	intron_variant	MODIFIER	c.1102-402dupA c.1102-402dupA	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10	INFO_REALIGN_3_PRIME	chr1	103662240
chr1:103662240	TA TA	T T	5	a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0073 others(2): Show a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0073 a0001c0001t0001g0092 a0010c0014t0001g0070	5	HG01069.hp2 HG02280.hp1 HG02965.hp2 others(2): Show HG01069.hp2 HG02280.hp1 HG02965.hp2 HG03491.hp2 NA19058.hp1	intron_variant	MODIFIER	c.1102-402delA c.1102-402delA	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10	INFO_REALIGN_3_PRIME	chr1	103662240
chr1:103662268	G G	A A	1	a0001c0001t0001g0041 a0001c0001t0001g0041	1	HG02630.hp1 HG02630.hp1	intron_variant	MODIFIER	c.1102-389G>A c.1102-389G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10		chr1	103662268
chr1:103662388	G G	A A	1	a0001c0001t0001g0051 a0001c0001t0001g0051	1	HG02818.hp2 HG02818.hp2	intron_variant	MODIFIER	c.1102-269G>A c.1102-269G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10		chr1	103662388
chr1:103662459	A A	G G	7	a0001c0001t0001g0022 a0001c0001t0001g0025 a0001c0001t0001g0046 others(4): Show a0001c0001t0001g0022 a0001c0001t0001g0025 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0071	9	HG02109.hp2 HG02622.hp2 HG02965.hp1 others(6): Show HG02109.hp2 HG02622.hp2 HG02965.hp1 HG03139.hp2 HG03486.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2	intron_variant	MODIFIER	c.1102-198A>G c.1102-198A>G	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	8/10		chr1	103662459
chr1:103662819	G G	A A	1	a0001c0001t0001g0026 a0001c0001t0001g0026	2	HG01952.hp1 HG01993.hp2 HG01952.hp1 HG01993.hp2	intron_variant	MODIFIER	c.1220+44G>A c.1220+44G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	9/10		chr1	103662819
chr1:103662858	A A	T T	2	a0001c0001t0001g0029 a0012c0005t0001g0065 a0001c0001t0001g0029 a0012c0005t0001g0065	3	HG00735.hp2 HG02602.hp1 HG03831.hp1 HG00735.hp2 HG02602.hp1 HG03831.hp1	intron_variant	MODIFIER	c.1221-28A>T c.1221-28A>T	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	9/10		chr1	103662858
chr1:103663029	A A	G G	1	a0001c0001t0001g0082 a0001c0001t0001g0082	1	HG03017.hp1 HG03017.hp1	intron_variant	MODIFIER	c.1346+18A>G c.1346+18A>G	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	10/10		chr1	103663029
chr1:103663067	CT CT	C C	16	a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0012 others(13): Show a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0012 a0001c0001t0001g0026 a0001c0001t0001g0038 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0060 a0001c0001t0001g0064 a0001c0001t0001g0068 a0001c0001t0001g0082 a0001c0001t0001g0091 a0001c0003t0001g0004 a0002c0002t0001g0039 a0002c0002t0001g0055 a0007c0009t0001g0012	35	HG00544.hp2 HG00609.hp1 HG01106.hp2 others(32): Show HG00544.hp2 HG00609.hp1 HG01106.hp2 HG01261.hp2 HG01952.hp1 HG01993.hp2 HG02083.hp2 HG02300.hp1 HG02523.hp2 HG02738.hp1 HG02738.hp2 HG03017.hp1 HG03486.hp2 HG04228.hp2 NA18941.hp2 NA18944.hp2 NA18950.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp2 NA18975.hp2 NA18985.hp1 NA18986.hp1 NA18986.hp2 NA18992.hp1 NA19000.hp2 NA19011.hp2 NA19063.hp2 NA19064.hp2 NA19065.hp2 NA19068.hp2 NA19072.hp2 NA19080.hp2 NA19085.hp2 NA20300.hp2	intron_variant	MODIFIER	c.1346+66delT c.1346+66delT	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	10/10	INFO_REALIGN_3_PRIME	chr1	103663067
chr1:103663172	G G	C C	1	a0001c0001t0004g0077 a0001c0001t0004g0077	1	NA19002.hp2 NA19002.hp2	intron_variant	MODIFIER	c.1346+161G>C c.1346+161G>C	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	10/10		chr1	103663172
chr1:103663206	T T	C C	1	a0001c0001t0001g0024 a0001c0001t0001g0024	2	NA18948.hp2 NA19070.hp2 NA18948.hp2 NA19070.hp2	intron_variant	MODIFIER	c.1346+195T>C c.1346+195T>C	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	10/10		chr1	103663206
chr1:103663206	T T	G G	87	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(84): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0038 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0002g0045 a0001c0001t0003g0011 a0001c0001t0004g0077 a0001c0003t0001g0004 a0001c0010t0001g0009 a0001c0013t0001g0019 a0002c0002t0001g0039 a0002c0002t0001g0055 a0003c0017t0001g0001 a0004c0016t0001g0010 a0005c0008t0001g0001 a0006c0012t0001g0043 a0007c0009t0001g0012 a0008c0011t0001g0010 a0009c0015t0001g0069 a0010c0014t0001g0070 a0011c0006t0001g0034 a0012c0005t0001g0065	191	HG00140.hp1 HG00408.hp1 HG00544.hp1 others(188): Show HG00140.hp1 HG00408.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01106.hp1 HG01106.hp2 HG01167.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01261.hp1 HG01261.hp2 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01934.hp1 HG01934.hp2 HG01952.hp1 HG01952.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02135.hp1 HG02148.hp1 HG02148.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02717.hp2 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02818.hp1 HG02818.hp2 HG02965.hp1 HG02965.hp2 HG03017.hp1 HG03017.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03239.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp2 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG03654.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04228.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18941.hp2 NA18944.hp1 NA18944.hp2 NA18948.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18970.hp1 NA18970.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18981.hp1 NA18981.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp2 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19006.hp2 NA19009.hp1 NA19011.hp1 NA19011.hp2 NA19059.hp1 NA19060.hp1 NA19060.hp2 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19072.hp1 NA19072.hp2 NA19077.hp1 NA19078.hp2 NA19080.hp1 NA19080.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19089.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp2 NA20905.hp2	intron_variant	MODIFIER	c.1346+195T>G c.1346+195T>G	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	10/10		chr1	103663206
chr1:103663250	A A	G G	1	a0001c0001t0001g0085 a0001c0001t0001g0085	1	HG02735.hp2 HG02735.hp2	intron_variant	MODIFIER	c.1346+239A>G c.1346+239A>G	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	10/10		chr1	103663250
chr1:103663378	T T	C C	1	a0001c0001t0001g0049 a0001c0001t0001g0049	1	HG03139.hp2 HG03139.hp2	intron_variant	MODIFIER	c.1346+367T>C c.1346+367T>C	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	10/10		chr1	103663378
chr1:103663806	G G	A A	1	a0001c0001t0001g0084 a0001c0001t0001g0084	1	NA19078.hp1 NA19078.hp1	intron_variant	MODIFIER	c.1347-525G>A c.1347-525G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	10/10		chr1	103663806
chr1:103663912	C C	T T	78	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(75): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0086 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0002g0045 a0001c0001t0003g0011 a0001c0001t0004g0077 a0001c0003t0001g0004 a0001c0010t0001g0009 a0001c0013t0001g0019 a0002c0002t0001g0039 a0002c0002t0001g0055 a0003c0017t0001g0001 a0004c0016t0001g0010 a0005c0008t0001g0001 a0006c0012t0001g0043 a0008c0011t0001g0010 a0009c0015t0001g0069 a0010c0014t0001g0070 a0011c0006t0001g0034 a0012c0005t0001g0065	175	HG00140.hp1 HG00544.hp1 HG00544.hp2 others(172): Show HG00140.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp2 HG00609.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01106.hp2 HG01167.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01261.hp2 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01934.hp1 HG01934.hp2 HG01952.hp1 HG01981.hp1 HG01993.hp2 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02135.hp1 HG02148.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp1 HG02717.hp2 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02818.hp1 HG02818.hp2 HG02965.hp1 HG02965.hp2 HG03017.hp1 HG03017.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03239.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp2 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG03654.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04228.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18941.hp2 NA18944.hp1 NA18944.hp2 NA18948.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp1 NA18957.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp2 NA18970.hp1 NA18970.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18981.hp1 NA18981.hp2 NA18985.hp1 NA18985.hp2 NA18988.hp1 NA18988.hp2 NA18991.hp2 NA18992.hp1 NA19000.hp1 NA19000.hp2 NA19002.hp2 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19006.hp2 NA19011.hp1 NA19011.hp2 NA19058.hp1 NA19060.hp1 NA19060.hp2 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp2 NA19068.hp1 NA19070.hp1 NA19072.hp2 NA19077.hp1 NA19080.hp1 NA19080.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp2 NA20905.hp2	intron_variant	MODIFIER	c.1347-419C>T c.1347-419C>T	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	10/10		chr1	103663912
chr1:103664050	T T	G G	1	a0001c0001t0001g0076 a0001c0001t0001g0076	1	HG02135.hp2 HG02135.hp2	intron_variant	MODIFIER	c.1347-281T>G c.1347-281T>G	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	10/10		chr1	103664050
chr1:103664298	T T	G G	1	a0001c0001t0001g0066 a0001c0001t0001g0066	1	HG01517.hp2 HG01517.hp2	intron_variant	MODIFIER	c.1347-33T>G c.1347-33T>G	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	10/10		chr1	103664298
chr1:103664300	T T	C C	1	a0001c0001t0001g0040 a0001c0001t0001g0040	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.1347-31T>C c.1347-31T>C	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	10/10		chr1	103664300
chr1:103664305	G G	A A	2	a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0083 a0001c0001t0001g0084	2	NA19078.hp1 NA19089.hp2 NA19078.hp1 NA19089.hp2	intron_variant	MODIFIER	c.1347-26G>A c.1347-26G>A	AMY1A	ENSG00000237763.10	transcript	ENST00000370083.9	protein_coding	10/10		chr1	103664305

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🧬 JoGo Online Haplotype Explorer AMY1A_chr1_103650760_103669554

JoGo Local Haplotype Explorer (on iGV) AMY1A_chr1_103650760_103669554

Translation Multiple Alignment View

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 13)

CCoding Level Haplotype Info (Total: 17)

TTranscript Level Haplotype Info (Total: 5)

GGenebody Level Haplotype Info (Total: 93)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 17)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 20)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 104)

Haplotype Details by Sample (Haploid Level) (Total: 230)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 13)

CCoding Level Variants (Synonymous Mutations) (Total: 7)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 3)

GGenebody Level Haplotype Variants (Intron) (Total: 89)

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Annotation (Repeats)

Annotation (SNP Array)