JoGo: Joint Open Genome and Omics Platform

Search by Genic region

geneid	27301
ensemblid	ENSG00000169188.5
hgncid	17889
symbol	APEX2
name	apurinic/apyrimidinic endodeoxyribonuclease 2
refseq_nuc	NM_014481.4
refseq_prot	NP_055296.2
ensembl_nuc	ENST00000374987.4
ensembl_prot	ENSP00000364126.3
mane_status	MANE Select
chr	chrX
start	55000363
end	55009057
strand	+
ver	v1.2
region	chrX:55000363-55009057
region5000	chrX:54995363-55014057
regionname0	APEX2_chrX_55000363_55009057
regionname5000	APEX2_chrX_54995363_55014057

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	518	293	71	58	129	9	24	95	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0002	0/0	518	3	0	0	0	0	3	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0003	0/0	518	1	0	0	1	0	0	1	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0004	0/0	196	1	0	0	1	0	0	1	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0005	0/0	518	1	0	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0006	0/0	518	1	1	0	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0007	0/0	518	1	0	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0008	0/0	518	1	0	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0009	0/0	518	1	0	0	0	0	1	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/0	1557	255	63	51	108	9	23	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
c0002	0/0	1557	16	0	0	16	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
c0003	0/0	1557	13	5	2	5	0	1	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
c0004	0/0	1557	3	0	0	0	0	3	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
c0005	0/0	1557	2	2	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
c0006	0/0	1557	2	0	2	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
c0007	0/0	1557	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
c0008	0/1	1557	1	0	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
c0009	0/0	1557	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
c0010	0/0	1557	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
c0011	0/0	1557	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
c0012	0/0	1557	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
c0013	0/0	1557	1	0	0	0	0	1	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
c0014	0/0	1557	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
c0015	0/0	1558	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
c0016	0/0	1557	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
c0017	0/0	1557	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
c0018	0/0	1557	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	1683	152	25	34	71	5	15	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
t0002	0/0	1683	95	18	21	43	4	9	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
t0003	0/0	1684	20	19	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
t0004	0/0	1684	13	5	2	5	0	1	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
t0005	0/0	1684	9	0	0	8	0	1	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
t0006	0/0	1683	2	0	0	2	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
t0007	0/0	1683	2	0	0	0	0	2	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
t0008	0/0	1684	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
t0009	0/0	1684	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
t0010	0/0	1683	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
t0011	0/0	1684	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
t0012	0/0	1679	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
t0013	0/0	1682	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
t0014	0/0	1685	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
t0015	0/0	1683	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
t0016	0/0	1683	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
t0017	0/0	1683	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/1	248	41	53	121	9	22	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0002	0/0	6	6	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0003	0/0	5	5	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0004	0/0	5	0	0	5	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0005	0/0	5	5	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0006	0/0	4	3	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0007	0/0	2	2	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0008	0/0	2	2	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0009	0/0	2	0	0	2	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0010	0/0	2	2	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0011	0/0	2	0	1	0	0	1	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0012	0/0	2	2	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0013	0/0	2	0	1	0	0	1	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0014	0/0	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0015	0/0	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0016	0/0	1	0	0	0	0	1	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0017	0/0	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0018	0/0	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0019	0/0	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0020	0/0	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0021	0/0	1	0	0	0	0	1	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0022	0/0	1	0	0	0	0	1	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0023	0/0	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0024	0/0	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0025	0/0	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0026	0/0	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0027	0/0	1	0	0	0	0	1	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0028	0/0	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
g0029	0/0	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/0	1557	255	63	51	108	9	23	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0002	0/0	1557	16	0	0	16	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0003	0/0	1557	13	5	2	5	0	1	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0005	0/0	1557	2	2	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0006	0/0	1557	2	0	2	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0007	0/0	1557	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0008	0/1	1557	1	0	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0014	0/0	1557	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0017	0/0	1557	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0018	0/0	1557	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0002c0004	0/0	1557	3	0	0	0	0	3	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0003c0016	0/0	1557	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0004c0015	0/0	1558	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0005c0012	0/0	1557	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0006c0010	0/0	1557	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0007c0009	0/0	1557	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0008c0011	0/0	1557	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0009c0013	0/0	1557	1	0	0	0	0	1	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/0	3239	123	25	28	52	5	12	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0001t0002	0/0	3239	93	18	20	43	4	8	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0001t0003	0/0	3240	18	17	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0001t0005	0/0	3240	9	0	0	8	0	1	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0001t0006	0/0	3239	2	0	0	2	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0001t0007	0/0	3239	2	0	0	0	0	2	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0001t0010	0/0	3239	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0001t0011	0/0	3240	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0001t0012	0/0	3235	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0001t0013	0/0	3238	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0001t0014	0/0	3241	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0001t0015	0/0	3239	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0001t0016	0/0	3239	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0001t0017	0/0	3239	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0002t0001	0/0	3239	16	0	0	16	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0003t0004	0/0	3240	13	5	2	5	0	1	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0005t0008	0/0	3240	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0005t0009	0/0	3240	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0006t0001	0/0	3239	2	0	2	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0007t0001	0/0	3239	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0008t0001	0/1	3239	1	0	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0014t0002	0/0	3239	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0017t0001	0/0	3239	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0001c0018t0003	0/0	3240	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0002c0004t0001	0/0	3239	3	0	0	0	0	3	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0003c0016t0001	0/0	3239	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0004c0015t0001	0/0	3240	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0005c0012t0001	0/0	3239	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0006c0010t0003	0/0	3240	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0007c0009t0001	0/0	3239	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0008c0011t0001	0/0	3239	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057
a0009c0013t0002	0/0	3239	1	0	0	0	0	1	APEX2_chrX_54995363_55014057	APEX2	copy fasta	chrX	54995363	55014057

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/0	114	21	26	52	5	9	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0001g0012	0/0	2	2	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0001g0013	0/0	2	0	1	0	0	1	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0001g0014	0/0	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0001g0018	0/0	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0001g0022	0/0	1	0	0	0	0	1	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0001g0026	0/0	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0001g0027	0/0	1	0	0	0	0	1	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0002g0001	0/0	77	15	18	33	4	7	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0002g0002	0/0	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0002g0004	0/0	5	0	0	5	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0002g0009	0/0	2	0	0	2	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0002g0010	0/0	2	2	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0002g0011	0/0	2	0	1	0	0	1	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0002g0020	0/0	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0002g0024	0/0	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0002g0028	0/0	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0002g0029	0/0	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0003g0002	0/0	4	4	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0003g0003	0/0	4	4	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0003g0005	0/0	5	5	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0003g0006	0/0	3	2	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0003g0007	0/0	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0003g0015	0/0	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0005g0001	0/0	9	0	0	8	0	1	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0006g0001	0/0	2	0	0	2	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0007g0001	0/0	1	0	0	0	0	1	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0007g0016	0/0	1	0	0	0	0	1	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0010g0001	0/0	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0011g0001	0/0	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0012g0001	0/0	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0013g0001	0/0	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0014g0006	0/0	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0015g0003	0/0	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0016g0001	0/0	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0001t0017g0001	0/0	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0002t0001g0001	0/0	15	0	0	15	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0002t0001g0023	0/0	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0003t0004g0001	0/0	12	4	2	5	0	1	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0003t0004g0017	0/0	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0005t0008g0008	0/0	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0005t0009g0008	0/0	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0006t0001g0001	0/0	2	0	2	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0007t0001g0001	0/0	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0008t0001g0001	0/1	1	0	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0014t0002g0001	0/0	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0017t0001g0001	0/0	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0001c0018t0003g0002	0/0	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0002c0004t0001g0001	0/0	3	0	0	0	0	3	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0003c0016t0001g0001	0/0	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0004c0015t0001g0001	0/0	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0005c0012t0001g0019	0/0	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0006c0010t0003g0007	0/0	1	1	0	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0007c0009t0001g0001	0/0	1	0	0	1	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0008c0011t0001g0025	0/0	1	0	1	0	0	0	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
a0009c0013t0002g0021	0/0	1	0	0	0	0	1	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00140	hp1	a0001	c0001	t0002	g0001	EUR	GBR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00323	hp1	a0001	c0001	t0002	g0001	EUR	FIN	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00408	hp1	a0007	c0009	t0001	g0001	EAS	CHS	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00408	hp2	a0001	c0001	t0002	g0001	EAS	CHS	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00423	hp1	a0001	c0001	t0001	g0001	EAS	CHS	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00423	hp2	a0001	c0001	t0001	g0001	EAS	CHS	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00438	hp1	a0001	c0001	t0002	g0001	EAS	CHS	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00544	hp2	a0001	c0001	t0001	g0001	EAS	CHS	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00558	hp2	a0001	c0001	t0011	g0001	EAS	CHS	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00597	hp1	a0001	c0003	t0004	g0001	EAS	CHS	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00597	hp2	a0001	c0001	t0001	g0001	EAS	CHS	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00609	hp1	a0001	c0003	t0004	g0001	EAS	CHS	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00621	hp1	a0001	c0001	t0005	g0001	EAS	CHS	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00639	hp1	a0001	c0001	t0002	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00639	hp2	a0001	c0001	t0001	g0014	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00733	hp1	a0001	c0001	t0016	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00733	hp2	a0008	c0011	t0001	g0025	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00738	hp1	a0001	c0001	t0002	g0024	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00741	hp1	a0001	c0017	t0001	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01070	hp2	a0001	c0001	t0002	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01074	hp1	a0001	c0001	t0002	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01081	hp2	a0001	c0014	t0002	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01106	hp1	a0005	c0012	t0001	g0019	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01109	hp1	a0001	c0001	t0002	g0011	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01167	hp1	a0001	c0003	t0004	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01168	hp1	a0001	c0001	t0002	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01169	hp1	a0001	c0003	t0004	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01169	hp2	a0001	c0001	t0002	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01175	hp1	a0001	c0007	t0001	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01243	hp1	a0001	c0001	t0002	g0001	AMR	PUR	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01255	hp1	a0001	c0001	t0003	g0006	AMR	CLM	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01256	hp1	a0001	c0006	t0001	g0001	AMR	CLM	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01257	hp1	a0001	c0001	t0002	g0001	AMR	CLM	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01257	hp2	a0001	c0001	t0001	g0001	AMR	CLM	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01258	hp1	a0001	c0001	t0002	g0001	AMR	CLM	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01261	hp1	a0001	c0001	t0002	g0001	AMR	CLM	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01346	hp1	a0001	c0006	t0001	g0001	AMR	CLM	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01346	hp2	a0001	c0001	t0001	g0013	AMR	CLM	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01358	hp1	a0001	c0001	t0001	g0001	AMR	CLM	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01361	hp2	a0001	c0001	t0001	g0001	AMR	CLM	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01433	hp1	a0001	c0001	t0010	g0001	AMR	CLM	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01496	hp1	a0001	c0001	t0002	g0001	AMR	CLM	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01496	hp2	a0001	c0001	t0002	g0001	AMR	CLM	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01516	hp2	a0001	c0001	t0002	g0001	EUR	IBS	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01884	hp1	a0001	c0001	t0002	g0001	AFR	ACB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01884	hp2	a0001	c0001	t0001	g0001	AFR	ACB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01934	hp1	a0001	c0001	t0002	g0001	AMR	PEL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01952	hp1	a0001	c0001	t0001	g0001	AMR	PEL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01975	hp1	a0001	c0001	t0002	g0001	AMR	PEL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01981	hp1	a0001	c0001	t0002	g0001	AMR	PEL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01993	hp1	a0001	c0001	t0002	g0001	AMR	PEL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02015	hp1	a0001	c0001	t0002	g0001	EAS	KHV	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02040	hp1	a0001	c0003	t0004	g0001	EAS	KHV	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02055	hp1	a0001	c0003	t0004	g0001	AFR	ACB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02056	hp1	a0001	c0001	t0001	g0001	EAS	KHV	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02074	hp1	a0001	c0001	t0002	g0001	EAS	KHV	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02080	hp1	a0001	c0001	t0001	g0001	EAS	KHV	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02080	hp2	a0001	c0001	t0002	g0001	EAS	KHV	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02129	hp1	a0001	c0001	t0002	g0001	EAS	KHV	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02145	hp1	a0001	c0001	t0003	g0002	AFR	ACB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02148	hp1	a0001	c0001	t0002	g0001	AMR	PEL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02148	hp2	a0001	c0001	t0001	g0001	AMR	PEL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02155	hp1	a0001	c0001	t0002	g0001	EAS	CDX	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02155	hp2	a0001	c0003	t0004	g0001	EAS	CDX	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02165	hp2	a0001	c0001	t0002	g0001	EAS	CDX	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02257	hp1	a0001	c0001	t0001	g0018	AFR	ACB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02257	hp2	a0001	c0005	t0008	g0008	AFR	ACB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02258	hp1	a0001	c0001	t0002	g0001	AFR	ACB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02280	hp1	a0001	c0001	t0002	g0001	AFR	ACB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02280	hp2	a0001	c0001	t0001	g0001	AFR	ACB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02293	hp1	a0001	c0001	t0002	g0001	AMR	PEL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02293	hp2	a0001	c0001	t0001	g0001	AMR	PEL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02523	hp2	a0001	c0001	t0001	g0001	EAS	KHV	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02572	hp1	a0001	c0001	t0002	g0002	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02602	hp1	a0002	c0004	t0001	g0001	SAS	PJL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02615	hp1	a0001	c0001	t0001	g0001	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02615	hp2	a0001	c0003	t0004	g0001	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02622	hp1	a0001	c0001	t0001	g0001	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02622	hp2	a0001	c0001	t0003	g0015	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02630	hp1	a0001	c0001	t0001	g0001	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02630	hp2	a0001	c0001	t0003	g0002	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02647	hp1	a0006	c0010	t0003	g0007	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02683	hp2	a0001	c0001	t0002	g0001	SAS	PJL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02698	hp1	a0001	c0001	t0002	g0001	SAS	PJL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02717	hp1	a0001	c0001	t0002	g0001	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02723	hp1	a0001	c0001	t0001	g0001	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02723	hp2	a0001	c0001	t0003	g0003	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02735	hp1	a0002	c0004	t0001	g0001	SAS	PJL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02738	hp1	a0001	c0001	t0005	g0001	SAS	PJL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02809	hp1	a0001	c0001	t0013	g0001	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02809	hp2	a0001	c0018	t0003	g0002	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02818	hp1	a0001	c0001	t0002	g0001	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02818	hp2	a0001	c0001	t0002	g0010	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02886	hp1	a0001	c0001	t0002	g0001	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02886	hp2	a0001	c0001	t0001	g0001	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02895	hp1	a0001	c0001	t0003	g0003	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02897	hp1	a0001	c0001	t0001	g0001	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02897	hp2	a0001	c0001	t0015	g0003	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02922	hp1	a0001	c0001	t0002	g0001	AFR	ESN	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02922	hp2	a0001	c0001	t0003	g0006	AFR	ESN	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02965	hp1	a0001	c0001	t0001	g0001	AFR	ESN	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02970	hp1	a0001	c0005	t0009	g0008	AFR	ESN	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02970	hp2	a0001	c0001	t0003	g0006	AFR	ESN	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02976	hp1	a0001	c0001	t0001	g0001	AFR	ESN	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02976	hp2	a0001	c0001	t0003	g0002	AFR	ESN	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03041	hp1	a0001	c0001	t0001	g0001	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03041	hp2	a0001	c0001	t0001	g0001	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03098	hp1	a0001	c0001	t0002	g0001	AFR	MSL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03130	hp1	a0001	c0001	t0001	g0001	AFR	ESN	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03139	hp1	a0001	c0001	t0001	g0001	AFR	ESN	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03195	hp1	a0001	c0001	t0003	g0005	AFR	ESN	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03195	hp2	a0001	c0001	t0001	g0001	AFR	ESN	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03209	hp1	a0001	c0001	t0002	g0010	AFR	MSL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03225	hp1	a0001	c0001	t0002	g0001	AFR	MSL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03453	hp1	a0001	c0001	t0003	g0002	AFR	MSL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03453	hp2	a0001	c0001	t0003	g0007	AFR	MSL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03486	hp1	a0001	c0003	t0004	g0001	AFR	MSL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03486	hp2	a0001	c0001	t0003	g0005	AFR	MSL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03490	hp1	a0001	c0001	t0001	g0027	SAS	PJL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03491	hp1	a0001	c0001	t0002	g0001	SAS	PJL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03492	hp1	a0001	c0001	t0002	g0001	SAS	PJL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03516	hp1	a0001	c0001	t0003	g0005	AFR	ESN	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03516	hp2	a0001	c0001	t0014	g0006	AFR	ESN	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03540	hp1	a0001	c0001	t0001	g0001	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03540	hp2	a0001	c0003	t0004	g0017	AFR	GWD	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03579	hp1	a0001	c0001	t0002	g0001	AFR	MSL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03654	hp1	a0001	c0001	t0001	g0001	SAS	PJL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03688	hp1	a0002	c0004	t0001	g0001	SAS	STU	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03704	hp1	a0001	c0001	t0002	g0001	SAS	PJL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03704	hp2	a0001	c0003	t0004	g0001	SAS	PJL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03710	hp1	a0001	c0001	t0007	g0001	SAS	PJL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03834	hp2	a0001	c0001	t0001	g0013	SAS	BEB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03927	hp1	a0001	c0001	t0001	g0001	SAS	BEB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03942	hp1	a0001	c0001	t0007	g0016	SAS	BEB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG04184	hp1	a0001	c0001	t0002	g0001	SAS	BEB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG04184	hp2	a0001	c0001	t0001	g0022	SAS	BEB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG04204	hp1	a0001	c0001	t0002	g0001	SAS	STU	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG04228	hp1	a0009	c0013	t0002	g0021	SAS	STU	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18522	hp1	a0001	c0001	t0001	g0001	AFR	YRI	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18612	hp1	a0001	c0001	t0002	g0001	EAS	CHB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18747	hp1	a0001	c0001	t0002	g0001	EAS	CHB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18940	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18941	hp1	a0001	c0001	t0002	g0004	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18941	hp2	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18943	hp1	a0001	c0001	t0002	g0020	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18944	hp1	a0001	c0003	t0004	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18945	hp1	a0001	c0001	t0005	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18946	hp1	a0001	c0002	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18946	hp2	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18948	hp1	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18949	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18949	hp2	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18950	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18950	hp2	a0001	c0001	t0005	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18952	hp1	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18953	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18954	hp1	a0001	c0002	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18957	hp1	a0001	c0001	t0005	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18957	hp2	a0001	c0002	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18960	hp1	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18961	hp1	a0001	c0001	t0017	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18962	hp1	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18964	hp1	a0001	c0002	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18964	hp2	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18965	hp1	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18966	hp1	a0001	c0001	t0006	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18967	hp1	a0003	c0016	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18969	hp2	a0001	c0002	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18970	hp1	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18971	hp1	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18972	hp1	a0001	c0001	t0002	g0004	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18972	hp2	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18973	hp1	a0001	c0002	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18977	hp1	a0001	c0001	t0002	g0004	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18980	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18980	hp2	a0001	c0002	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18981	hp1	a0001	c0002	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18981	hp2	a0001	c0001	t0002	g0004	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18985	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18988	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18989	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18990	hp1	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18993	hp1	a0001	c0002	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18993	hp2	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18995	hp1	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18999	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18999	hp2	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19003	hp2	a0001	c0002	t0001	g0023	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19004	hp1	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19006	hp1	a0001	c0001	t0012	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19007	hp1	a0001	c0001	t0005	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19009	hp1	a0001	c0001	t0005	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19011	hp1	a0001	c0001	t0005	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19011	hp2	a0001	c0001	t0002	g0009	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19030	hp1	a0001	c0003	t0004	g0001	AFR	LWK	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19030	hp2	a0001	c0001	t0003	g0003	AFR	LWK	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19043	hp1	a0001	c0001	t0001	g0001	AFR	LWK	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19055	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19056	hp1	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19057	hp1	a0001	c0002	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19057	hp2	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19058	hp1	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19060	hp1	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19062	hp1	a0001	c0002	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19063	hp1	a0001	c0001	t0005	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19064	hp1	a0001	c0002	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19064	hp2	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19067	hp1	a0001	c0001	t0002	g0028	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19068	hp1	a0001	c0002	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19070	hp1	a0001	c0002	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19072	hp1	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19075	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19076	hp1	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19077	hp1	a0001	c0001	t0002	g0029	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19077	hp2	a0004	c0015	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19079	hp1	a0001	c0001	t0002	g0004	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19082	hp1	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19083	hp1	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19084	hp1	a0001	c0002	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19084	hp2	a0001	c0001	t0006	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19086	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19087	hp1	a0001	c0001	t0002	g0009	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19087	hp2	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19089	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19091	hp1	a0001	c0001	t0002	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19240	hp1	a0001	c0001	t0001	g0012	AFR	YRI	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA19240	hp2	a0001	c0001	t0001	g0001	AFR	YRI	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA20129	hp1	a0001	c0001	t0003	g0005	AFR	ASW	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA20129	hp2	a0001	c0001	t0003	g0003	AFR	ASW	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA20805	hp1	a0001	c0001	t0002	g0001	EUR	TSI	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA20905	hp1	a0001	c0001	t0002	g0011	SAS	GIH	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG01123	hp2	a0001	c0001	t0002	g0001	AMR	CLM	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02109	hp1	a0001	c0001	t0002	g0001	AFR	ACB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02109	hp2	a0001	c0001	t0002	g0001	AFR	ACB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02486	hp1	a0001	c0001	t0002	g0001	AFR	ACB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02559	hp1	a0001	c0001	t0002	g0001	AFR	ACB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG02559	hp2	a0001	c0001	t0003	g0005	AFR	ACB	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG03471	hp1	a0001	c0001	t0001	g0012	AFR	MSL	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG06807	hp1	a0001	c0001	t0002	g0001	AFR	USA	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
HG06807	hp2	a0001	c0001	t0001	g0001	AFR	USA	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA18955	hp1	a0001	c0001	t0001	g0001	EAS	JPT	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA21309	hp1	a0001	c0001	t0001	g0026	AFR	LWK	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
NA21309	hp2	a0001	c0001	t0001	g0001	AFR	LWK	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
homoSapiens_chm13v2	hp1	a0001	c0008	t0001	g0001	REF	REF	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	APEX2_chrX_54995363_55014057	APEX2	chrX	54995363	55014057

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	status	chr	pos
chrX:55002430	C C	T T	1	a0003 a0003	1	NA18967.hp1 NA18967.hp1	missense_variant&splice_region_variant	MODERATE	c.421C>T c.421C>T	p.Arg141Cys p.Arg141Cys	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	3/6	481/3239	421/1557	141/518		chrX	55002430
chrX:55003813	T T	TG TG	1	a0004 a0004	1	NA19077.hp2 NA19077.hp2	frameshift_variant	HIGH	c.587dupG c.587dupG	p.Asp197fs p.Asp197fs	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	5/6	648/3239	588/1557	196/518	INFO_REALIGN_3_PRIME	chrX	55003813
chrX:55006683	C C	T T	1	a0009 a0009	1	HG04228.hp1 HG04228.hp1	missense_variant	MODERATE	c.805C>T c.805C>T	p.His269Tyr p.His269Tyr	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	865/3239	805/1557	269/518		chrX	55006683
chrX:55006857	C C	T T	1	a0005 a0005	1	HG01106.hp1 HG01106.hp1	missense_variant	MODERATE	c.979C>T c.979C>T	p.Arg327Cys p.Arg327Cys	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	1039/3239	979/1557	327/518		chrX	55006857
chrX:55006900	G G	A A	1	a0002 a0002	3	HG02602.hp1 HG02735.hp1 HG03688.hp1 HG02602.hp1 HG02735.hp1 HG03688.hp1	missense_variant	MODERATE	c.1022G>A c.1022G>A	p.Arg341His p.Arg341His	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	1082/3239	1022/1557	341/518		chrX	55006900
chrX:55007188	A A	T T	1	a0008 a0008	1	HG00733.hp2 HG00733.hp2	missense_variant	MODERATE	c.1310A>T c.1310A>T	p.Lys437Met p.Lys437Met	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	1370/3239	1310/1557	437/518		chrX	55007188
chrX:55007349	C C	T T	1	a0006 a0006	1	HG02647.hp1 HG02647.hp1	missense_variant	MODERATE	c.1471C>T c.1471C>T	p.Arg491Cys p.Arg491Cys	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	1531/3239	1471/1557	491/518		chrX	55007349
chrX:55007426	G G	T T	1	a0007 a0007	1	HG00408.hp1 HG00408.hp1	missense_variant	MODERATE	c.1548G>T c.1548G>T	p.Arg516Ser p.Arg516Ser	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	1608/3239	1548/1557	516/518		chrX	55007426

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chrX:55000515	C C	G G	1	a0001c0018 a0001c0018	1	HG02809.hp2 HG02809.hp2	synonymous_variant	LOW	c.93C>G c.93C>G	p.Ala31Ala p.Ala31Ala	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	1/6	153/3239	93/1557	31/518	chrX	55000515
chrX:55001565	C C	T T	1	a0001c0017 a0001c0017	1	HG00741.hp1 HG00741.hp1	synonymous_variant	LOW	c.177C>T c.177C>T	p.Pro59Pro p.Pro59Pro	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	2/6	237/3239	177/1557	59/518	chrX	55001565
chrX:55002258	C C	T T	1	a0001c0006 a0001c0006	2	HG01256.hp1 HG01346.hp1 HG01256.hp1 HG01346.hp1	synonymous_variant	LOW	c.249C>T c.249C>T	p.Ala83Ala p.Ala83Ala	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	3/6	309/3239	249/1557	83/518	chrX	55002258
chrX:55002417	A A	G G	3	a0001c0002 a0003c0016 a0004c0015 a0001c0002 a0003c0016 a0004c0015	18	NA18946.hp1 NA18954.hp1 NA18957.hp2 others(15): Show NA18946.hp1 NA18954.hp1 NA18957.hp2 NA18964.hp1 NA18967.hp1 NA18969.hp2 NA18973.hp1 NA18980.hp2 NA18981.hp1 NA18993.hp1 NA19003.hp2 NA19057.hp1 NA19062.hp1 NA19064.hp1 NA19068.hp1 NA19070.hp1 NA19077.hp2 NA19084.hp1	synonymous_variant	LOW	c.408A>G c.408A>G	p.Thr136Thr p.Thr136Thr	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	3/6	468/3239	408/1557	136/518	chrX	55002417
chrX:55006559	C C	T T	1	a0001c0014 a0001c0014	1	HG01081.hp2 HG01081.hp2	synonymous_variant	LOW	c.681C>T c.681C>T	p.Ser227Ser p.Ser227Ser	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	741/3239	681/1557	227/518	chrX	55006559
chrX:55006805	A A	G G	1	a0001c0005 a0001c0005	2	HG02257.hp2 HG02970.hp1 HG02257.hp2 HG02970.hp1	synonymous_variant	LOW	c.927A>G c.927A>G	p.Ala309Ala p.Ala309Ala	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	987/3239	927/1557	309/518	chrX	55006805
chrX:55006874	T T	C C	1	a0001c0003 a0001c0003	13	HG00597.hp1 HG00609.hp1 HG01167.hp1 others(10): Show HG00597.hp1 HG00609.hp1 HG01167.hp1 HG01169.hp1 HG02040.hp1 HG02055.hp1 HG02155.hp2 HG02615.hp2 HG03486.hp1 HG03540.hp2 HG03704.hp2 NA18944.hp1 NA19030.hp1	synonymous_variant	LOW	c.996T>C c.996T>C	p.Phe332Phe p.Phe332Phe	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	1056/3239	996/1557	332/518	chrX	55006874
chrX:55006916	C C	A A	1	a0001c0007 a0001c0007	1	HG01175.hp1 HG01175.hp1	synonymous_variant	LOW	c.1038C>A c.1038C>A	p.Leu346Leu p.Leu346Leu	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	1098/3239	1038/1557	346/518	chrX	55006916
chrX:55007156	T T	C C	1	a0001c0008 a0001c0008	1	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	synonymous_variant	LOW	c.1278T>C c.1278T>C	p.Thr426Thr p.Thr426Thr	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	1338/3239	1278/1557	426/518	chrX	55007156

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chrX:55000413	G G	T T	1	a0001c0001t0017 a0001c0001t0017	1	NA18961.hp1 NA18961.hp1	5_prime_UTR_variant	MODIFIER	c.-10G>T c.-10G>T	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	1/6	10		chrX	55000413
chrX:55000417	T T	G G	2	a0001c0005t0008 a0001c0005t0009 a0001c0005t0008 a0001c0005t0009	2	HG02257.hp2 HG02970.hp1 HG02257.hp2 HG02970.hp1	5_prime_UTR_variant	MODIFIER	c.-6T>G c.-6T>G	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	1/6	6		chrX	55000417
chrX:55007542	C C	T T	1	a0001c0001t0016 a0001c0001t0016	1	HG00733.hp1 HG00733.hp1	3_prime_UTR_variant	MODIFIER	c.107C>T c.107C>T	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	107		chrX	55007542
chrX:55007673	C C	T T	1	a0001c0001t0007 a0001c0001t0007	2	HG03710.hp1 HG03942.hp1 HG03710.hp1 HG03942.hp1	3_prime_UTR_variant	MODIFIER	c.238C>T c.238C>T	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	238		chrX	55007673
chrX:55007894	A A	AG AG	1	a0001c0001t0005 a0001c0001t0005	9	HG00621.hp1 HG02738.hp1 NA18945.hp1 others(6): Show HG00621.hp1 HG02738.hp1 NA18945.hp1 NA18950.hp2 NA18957.hp1 NA19007.hp1 NA19009.hp1 NA19011.hp1 NA19063.hp1	3_prime_UTR_variant	MODIFIER	c.465dupG c.465dupG	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	466	INFO_REALIGN_3_PRIME	chrX	55007894
chrX:55007986	G G	T T	7	a0001c0001t0003 a0001c0001t0014 a0001c0001t0015 others(4): Show a0001c0001t0003 a0001c0001t0014 a0001c0001t0015 a0001c0005t0008 a0001c0005t0009 a0001c0018t0003 a0006c0010t0003	24	HG01255.hp1 HG02145.hp1 HG02257.hp2 others(21): Show HG01255.hp1 HG02145.hp1 HG02257.hp2 HG02559.hp2 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02723.hp2 HG02809.hp2 HG02895.hp1 HG02897.hp2 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03195.hp1 HG03453.hp1 HG03453.hp2 HG03486.hp2 HG03516.hp1 HG03516.hp2 NA19030.hp2 NA20129.hp1 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.551G>T c.551G>T	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	551		chrX	55007986
chrX:55008043	G G	A A	1	a0001c0001t0006 a0001c0001t0006	2	NA18966.hp1 NA19084.hp2 NA18966.hp1 NA19084.hp2	3_prime_UTR_variant	MODIFIER	c.608G>A c.608G>A	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	608		chrX	55008043
chrX:55008367	G G	A A	1	a0001c0001t0010 a0001c0001t0010	1	HG01433.hp1 HG01433.hp1	3_prime_UTR_variant	MODIFIER	c.932G>A c.932G>A	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	932		chrX	55008367
chrX:55008528	G G	GC GC	8	a0001c0001t0003 a0001c0001t0014 a0001c0001t0015 others(5): Show a0001c0001t0003 a0001c0001t0014 a0001c0001t0015 a0001c0003t0004 a0001c0005t0008 a0001c0005t0009 a0001c0018t0003 a0006c0010t0003	37	HG00597.hp1 HG00609.hp1 HG01167.hp1 others(34): Show HG00597.hp1 HG00609.hp1 HG01167.hp1 HG01169.hp1 HG01255.hp1 HG02040.hp1 HG02055.hp1 HG02145.hp1 HG02155.hp2 HG02257.hp2 HG02559.hp2 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02723.hp2 HG02809.hp2 HG02895.hp1 HG02897.hp2 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03195.hp1 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03704.hp2 NA18944.hp1 NA19030.hp1 NA19030.hp2 NA20129.hp1 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.1094dupC c.1094dupC	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	1095	INFO_REALIGN_3_PRIME	chrX	55008528
chrX:55008571	C C	CA CA	1	a0001c0001t0011 a0001c0001t0011	1	HG00558.hp2 HG00558.hp2	3_prime_UTR_variant	MODIFIER	c.1149dupA c.1149dupA	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	1150	INFO_REALIGN_3_PRIME	chrX	55008571
chrX:55008571	CA CA	C C	2	a0001c0001t0013 a0001c0001t0015 a0001c0001t0013 a0001c0001t0015	2	HG02809.hp1 HG02897.hp2 HG02809.hp1 HG02897.hp2	3_prime_UTR_variant	MODIFIER	c.1149delA c.1149delA	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	1149	INFO_REALIGN_3_PRIME	chrX	55008571
chrX:55008585	GAAAA GAAAA	G G	1	a0001c0001t0012 a0001c0001t0012	1	NA19006.hp1 NA19006.hp1	3_prime_UTR_variant	MODIFIER	c.1151_1154delAAAA c.1151_1154delAAAA	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	1151		chrX	55008585
chrX:55008724	G G	GA GA	1	a0001c0001t0014 a0001c0001t0014	1	HG03516.hp2 HG03516.hp2	3_prime_UTR_variant	MODIFIER	c.1291dupA c.1291dupA	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	1292	INFO_REALIGN_3_PRIME	chrX	55008724
chrX:55008736	G G	A A	1	a0001c0005t0008 a0001c0005t0008	1	HG02257.hp2 HG02257.hp2	3_prime_UTR_variant	MODIFIER	c.1301G>A c.1301G>A	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	1301		chrX	55008736
chrX:55008790	C C	T T	1	a0001c0001t0014 a0001c0001t0014	1	HG03516.hp2 HG03516.hp2	3_prime_UTR_variant	MODIFIER	c.1355C>T c.1355C>T	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	1355		chrX	55008790
chrX:55008850	C C	T T	17	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(14): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0003t0004 a0001c0005t0008 a0001c0005t0009 a0001c0014t0002 a0001c0018t0003 a0006c0010t0003 a0009c0013t0002	148	HG00140.hp1 HG00323.hp1 HG00408.hp2 others(145): Show HG00140.hp1 HG00323.hp1 HG00408.hp2 HG00438.hp1 HG00558.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00738.hp1 HG01070.hp2 HG01074.hp1 HG01081.hp2 HG01109.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01255.hp1 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01496.hp1 HG01496.hp2 HG01516.hp2 HG01884.hp1 HG01934.hp1 HG01975.hp1 HG01981.hp1 HG01993.hp1 HG02015.hp1 HG02040.hp1 HG02055.hp1 HG02074.hp1 HG02080.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02145.hp1 HG02148.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02293.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02723.hp2 HG02738.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03098.hp1 HG03195.hp1 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03491.hp1 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03942.hp1 HG04184.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 NA18612.hp1 NA18747.hp1 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18946.hp2 NA18948.hp1 NA18950.hp2 NA18952.hp1 NA18957.hp1 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18965.hp1 NA18966.hp1 NA18970.hp1 NA18971.hp1 NA18972.hp1 NA18977.hp1 NA18981.hp2 NA18990.hp1 NA18993.hp2 NA18995.hp1 NA18999.hp2 NA19004.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19063.hp1 NA19064.hp2 NA19067.hp1 NA19072.hp1 NA19076.hp1 NA19077.hp1 NA19079.hp1 NA19082.hp1 NA19083.hp1 NA19084.hp2 NA19087.hp1 NA19091.hp1 NA20129.hp1 NA20129.hp2 NA20805.hp1 NA20905.hp1	3_prime_UTR_variant	MODIFIER	c.1415C>T c.1415C>T	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	6/6	1415		chrX	55008850

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chrX:55000953	T T	G G	1	a0001c0001t0001g0014 a0001c0001t0001g0014	1	HG00639.hp2 HG00639.hp2	intron_variant	MODIFIER	c.157+374T>G c.157+374T>G	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	1/5		chrX	55000953
chrX:55000959	C C	T T	1	a0001c0001t0002g0029 a0001c0001t0002g0029	1	NA19077.hp1 NA19077.hp1	intron_variant	MODIFIER	c.157+380C>T c.157+380C>T	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	1/5		chrX	55000959
chrX:55001357	A A	G G	1	a0001c0001t0003g0005 a0001c0001t0003g0005	5	HG02559.hp2 HG03195.hp1 HG03486.hp2 others(2): Show HG02559.hp2 HG03195.hp1 HG03486.hp2 HG03516.hp1 NA20129.hp1	intron_variant	MODIFIER	c.158-189A>G c.158-189A>G	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	1/5		chrX	55001357
chrX:55001389	T T	G G	2	a0001c0001t0003g0007 a0006c0010t0003g0007 a0001c0001t0003g0007 a0006c0010t0003g0007	2	HG02647.hp1 HG03453.hp2 HG02647.hp1 HG03453.hp2	intron_variant	MODIFIER	c.158-157T>G c.158-157T>G	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	1/5		chrX	55001389
chrX:55001531	AT AT	A A	11	a0001c0001t0002g0002 a0001c0001t0003g0002 a0001c0001t0003g0003 others(8): Show a0001c0001t0002g0002 a0001c0001t0003g0002 a0001c0001t0003g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0015 a0001c0001t0014g0006 a0001c0001t0015g0003 a0001c0005t0008g0008 a0001c0005t0009g0008 a0001c0018t0003g0002	23	HG01255.hp1 HG02145.hp1 HG02257.hp2 others(20): Show HG01255.hp1 HG02145.hp1 HG02257.hp2 HG02559.hp2 HG02572.hp1 HG02622.hp2 HG02630.hp2 HG02723.hp2 HG02809.hp2 HG02895.hp1 HG02897.hp2 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03195.hp1 HG03453.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 NA19030.hp2 NA20129.hp1 NA20129.hp2	splice_region_variant&intron_variant	LOW	c.158-5delT c.158-5delT	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	1/5	INFO_REALIGN_3_PRIME	chrX	55001531
chrX:55001769	T T	TGAAATAT others(28): Show TGAAATATAATTTTTATGGATAGAATTATCCTACTG	8	a0001c0001t0002g0002 a0001c0001t0003g0002 a0001c0001t0003g0003 others(5): Show a0001c0001t0002g0002 a0001c0001t0003g0002 a0001c0001t0003g0003 a0001c0001t0003g0005 a0001c0001t0015g0003 a0001c0005t0008g0008 a0001c0005t0009g0008 a0001c0018t0003g0002	18	HG02145.hp1 HG02257.hp2 HG02559.hp2 others(15): Show HG02145.hp1 HG02257.hp2 HG02559.hp2 HG02572.hp1 HG02630.hp2 HG02723.hp2 HG02809.hp2 HG02895.hp1 HG02897.hp2 HG02970.hp1 HG02976.hp2 HG03195.hp1 HG03453.hp1 HG03486.hp2 HG03516.hp1 NA19030.hp2 NA20129.hp1 NA20129.hp2	intron_variant	MODIFIER	c.241+143_241+177dup others(35): Show c.241+143_241+177dupAATATAATTTTTATGGATAGAATTATCCTA CTGGA	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	2/5	INFO_REALIGN_3_PRIME	chrX	55001769
chrX:55001778	A A	T T	1	a0001c0001t0002g0028 a0001c0001t0002g0028	1	NA19067.hp1 NA19067.hp1	intron_variant	MODIFIER	c.241+149A>T c.241+149A>T	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	2/5		chrX	55001778
chrX:55002050	G G	A A	2	a0001c0005t0008g0008 a0001c0005t0009g0008 a0001c0005t0008g0008 a0001c0005t0009g0008	2	HG02257.hp2 HG02970.hp1 HG02257.hp2 HG02970.hp1	intron_variant	MODIFIER	c.242-201G>A c.242-201G>A	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	2/5		chrX	55002050
chrX:55002135	A A	T T	1	a0001c0001t0003g0005 a0001c0001t0003g0005	5	HG02559.hp2 HG03195.hp1 HG03486.hp2 others(2): Show HG02559.hp2 HG03195.hp1 HG03486.hp2 HG03516.hp1 NA20129.hp1	intron_variant	MODIFIER	c.242-116A>T c.242-116A>T	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	2/5		chrX	55002135
chrX:55002518	A A	G G	1	a0001c0001t0001g0013 a0001c0001t0001g0013	2	HG01346.hp2 HG03834.hp2 HG01346.hp2 HG03834.hp2	intron_variant	MODIFIER	c.422+87A>G c.422+87A>G	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	3/5		chrX	55002518
chrX:55002528	G G	A A	1	a0001c0001t0002g0004 a0001c0001t0002g0004	5	NA18941.hp1 NA18972.hp1 NA18977.hp1 others(2): Show NA18941.hp1 NA18972.hp1 NA18977.hp1 NA18981.hp2 NA19079.hp1	intron_variant	MODIFIER	c.422+97G>A c.422+97G>A	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	3/5		chrX	55002528
chrX:55002674	G G	A A	2	a0001c0001t0003g0007 a0006c0010t0003g0007 a0001c0001t0003g0007 a0006c0010t0003g0007	2	HG02647.hp1 HG03453.hp2 HG02647.hp1 HG03453.hp2	intron_variant	MODIFIER	c.422+243G>A c.422+243G>A	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	3/5		chrX	55002674
chrX:55002738	G G	GTCTT GTCTT	8	a0001c0001t0002g0002 a0001c0001t0003g0002 a0001c0001t0003g0003 others(5): Show a0001c0001t0002g0002 a0001c0001t0003g0002 a0001c0001t0003g0003 a0001c0001t0003g0005 a0001c0001t0015g0003 a0001c0005t0008g0008 a0001c0005t0009g0008 a0001c0018t0003g0002	18	HG02145.hp1 HG02257.hp2 HG02559.hp2 others(15): Show HG02145.hp1 HG02257.hp2 HG02559.hp2 HG02572.hp1 HG02630.hp2 HG02723.hp2 HG02809.hp2 HG02895.hp1 HG02897.hp2 HG02970.hp1 HG02976.hp2 HG03195.hp1 HG03453.hp1 HG03486.hp2 HG03516.hp1 NA19030.hp2 NA20129.hp1 NA20129.hp2	intron_variant	MODIFIER	c.423-223_423-222ins others(4): Show c.423-223_423-222insCTTT	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	3/5	INFO_REALIGN_3_PRIME	chrX	55002738
chrX:55003153	G G	A A	1	a0001c0001t0007g0016 a0001c0001t0007g0016	1	HG03942.hp1 HG03942.hp1	intron_variant	MODIFIER	c.569+45G>A c.569+45G>A	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	4/5		chrX	55003153
chrX:55003395	T T	C C	1	a0001c0003t0004g0017 a0001c0003t0004g0017	1	HG03540.hp2 HG03540.hp2	intron_variant	MODIFIER	c.569+287T>C c.569+287T>C	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	4/5		chrX	55003395
chrX:55003499	A A	G G	1	a0001c0001t0001g0027 a0001c0001t0001g0027	1	HG03490.hp1 HG03490.hp1	intron_variant	MODIFIER	c.570-300A>G c.570-300A>G	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	4/5		chrX	55003499
chrX:55003783	A A	G G	1	a0001c0001t0001g0026 a0001c0001t0001g0026	1	NA21309.hp1 NA21309.hp1	intron_variant	MODIFIER	c.570-16A>G c.570-16A>G	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	4/5		chrX	55003783
chrX:55003982	G G	T T	1	a0008c0011t0001g0025 a0008c0011t0001g0025	1	HG00733.hp2 HG00733.hp2	intron_variant	MODIFIER	c.639+114G>T c.639+114G>T	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	5/5		chrX	55003982
chrX:55004028	A A	G G	1	a0001c0001t0001g0012 a0001c0001t0001g0012	2	HG03471.hp1 NA19240.hp1 HG03471.hp1 NA19240.hp1	intron_variant	MODIFIER	c.639+160A>G c.639+160A>G	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	5/5		chrX	55004028
chrX:55004040	G G	A A	1	a0001c0001t0001g0018 a0001c0001t0001g0018	1	HG02257.hp1 HG02257.hp1	intron_variant	MODIFIER	c.639+172G>A c.639+172G>A	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	5/5		chrX	55004040
chrX:55004086	A A	G G	1	a0001c0001t0002g0024 a0001c0001t0002g0024	1	HG00738.hp1 HG00738.hp1	intron_variant	MODIFIER	c.639+218A>G c.639+218A>G	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	5/5		chrX	55004086
chrX:55004114	G G	A A	1	a0005c0012t0001g0019 a0005c0012t0001g0019	1	HG01106.hp1 HG01106.hp1	intron_variant	MODIFIER	c.639+246G>A c.639+246G>A	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	5/5		chrX	55004114
chrX:55004209	C C	T T	2	a0001c0001t0003g0006 a0001c0001t0014g0006 a0001c0001t0003g0006 a0001c0001t0014g0006	4	HG01255.hp1 HG02922.hp2 HG02970.hp2 others(1): Show HG01255.hp1 HG02922.hp2 HG02970.hp2 HG03516.hp2	intron_variant	MODIFIER	c.639+341C>T c.639+341C>T	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	5/5		chrX	55004209
chrX:55004396	C C	T T	1	a0001c0001t0003g0005 a0001c0001t0003g0005	5	HG02559.hp2 HG03195.hp1 HG03486.hp2 others(2): Show HG02559.hp2 HG03195.hp1 HG03486.hp2 HG03516.hp1 NA20129.hp1	intron_variant	MODIFIER	c.639+528C>T c.639+528C>T	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	5/5		chrX	55004396
chrX:55004444	G G	A A	3	a0001c0001t0002g0002 a0001c0001t0003g0002 a0001c0018t0003g0002 a0001c0001t0002g0002 a0001c0001t0003g0002 a0001c0018t0003g0002	6	HG02145.hp1 HG02572.hp1 HG02630.hp2 others(3): Show HG02145.hp1 HG02572.hp1 HG02630.hp2 HG02809.hp2 HG02976.hp2 HG03453.hp1	intron_variant	MODIFIER	c.639+576G>A c.639+576G>A	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	5/5		chrX	55004444
chrX:55004445	G G	C C	1	a0001c0001t0002g0020 a0001c0001t0002g0020	1	NA18943.hp1 NA18943.hp1	intron_variant	MODIFIER	c.639+577G>C c.639+577G>C	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	5/5		chrX	55004445
chrX:55004626	C C	G G	1	a0001c0002t0001g0023 a0001c0002t0001g0023	1	NA19003.hp2 NA19003.hp2	intron_variant	MODIFIER	c.639+758C>G c.639+758C>G	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	5/5		chrX	55004626
chrX:55004686	T T	C C	1	a0001c0001t0002g0009 a0001c0001t0002g0009	2	NA19011.hp2 NA19087.hp1 NA19011.hp2 NA19087.hp1	intron_variant	MODIFIER	c.639+818T>C c.639+818T>C	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	5/5		chrX	55004686
chrX:55004769	C C	G G	1	a0001c0001t0001g0022 a0001c0001t0001g0022	1	HG04184.hp2 HG04184.hp2	intron_variant	MODIFIER	c.639+901C>G c.639+901C>G	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	5/5		chrX	55004769
chrX:55004776	C C	A A	1	a0001c0001t0002g0010 a0001c0001t0002g0010	2	HG02818.hp2 HG03209.hp1 HG02818.hp2 HG03209.hp1	intron_variant	MODIFIER	c.639+908C>A c.639+908C>A	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	5/5		chrX	55004776
chrX:55004927	C C	T T	1	a0009c0013t0002g0021 a0009c0013t0002g0021	1	HG04228.hp1 HG04228.hp1	intron_variant	MODIFIER	c.639+1059C>T c.639+1059C>T	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	5/5		chrX	55004927
chrX:55004953	A A	G G	1	a0001c0001t0003g0005 a0001c0001t0003g0005	5	HG02559.hp2 HG03195.hp1 HG03486.hp2 others(2): Show HG02559.hp2 HG03195.hp1 HG03486.hp2 HG03516.hp1 NA20129.hp1	intron_variant	MODIFIER	c.639+1085A>G c.639+1085A>G	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	5/5		chrX	55004953
chrX:55005249	T T	C C	2	a0001c0005t0008g0008 a0001c0005t0009g0008 a0001c0005t0008g0008 a0001c0005t0009g0008	2	HG02257.hp2 HG02970.hp1 HG02257.hp2 HG02970.hp1	intron_variant	MODIFIER	c.640-1269T>C c.640-1269T>C	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	5/5		chrX	55005249
chrX:55005986	T T	G G	1	a0001c0001t0002g0011 a0001c0001t0002g0011	2	HG01109.hp1 NA20905.hp1 HG01109.hp1 NA20905.hp1	intron_variant	MODIFIER	c.640-532T>G c.640-532T>G	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	5/5		chrX	55005986
chrX:55006027	G G	A A	2	a0001c0005t0008g0008 a0001c0005t0009g0008 a0001c0005t0008g0008 a0001c0005t0009g0008	2	HG02257.hp2 HG02970.hp1 HG02257.hp2 HG02970.hp1	intron_variant	MODIFIER	c.640-491G>A c.640-491G>A	APEX2	ENSG00000169188.5	transcript	ENST00000374987.4	protein_coding	5/5		chrX	55006027

Search by Genic region

Search

🧬 JoGo Online Haplotype Explorer APEX2_chrX_54995363_55014057

JoGo Local Haplotype Explorer (on iGV) APEX2_chrX_54995363_55014057

Translation Multiple Alignment View

ACTG-Haplotype Mutation Positions 3D Viewer

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 9)

CCoding Level Haplotype Info (Total: 18)

TTranscript Level Haplotype Info (Total: 17)

GGenebody Level Haplotype Info (Total: 29)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 18)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 32)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 56)

Haplotype Details by Sample (Haploid Level) (Total: 303)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 8)

CCoding Level Variants (Synonymous Mutations) (Total: 9)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 16)

GGenebody Level Haplotype Variants (Intron) (Total: 35)

External Link

Annotation (Repeats)

Annotation (SNP Array)