Joint Open Genome and Omics Platform (JoGo)

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geneid	64925
ensemblid	ENSG00000177352.10
hgncid	25760
symbol	CCDC71
name	coiled-coil domain containing 71
refseq_nuc	NM_022903.4
refseq_prot	NP_075054.3
ensembl_nuc	ENST00000321895.7
ensembl_prot	ENSP00000319006.6
mane_status	MANE Select
chr	chr3
start	49162535
end	49166331
strand	-
ver	v1.2
region	chr3:49162535-49166331
region5000	chr3:49157535-49171331
regionname0	CCDC71_chr3_49162535_49166331
regionname5000	CCDC71_chr3_49157535_49171331

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	467	146	39	30	48	4	25	39	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
a0002	1/1	467	79	32	16	15	8	6	11	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
a0003	0/0	467	14	14	0	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
a0004	0/0	467	1	1	0	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
a0005	0/0	467	1	0	0	0	0	1	0	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
a0006	0/0	467	1	0	0	1	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/0	1404	146	39	30	48	4	25	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
c0002	1/1	1404	78	31	16	15	8	6	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
c0003	0/0	1404	14	14	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
c0004	0/0	1404	1	1	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
c0005	0/0	1404	1	1	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
c0006	0/0	1404	1	0	0	0	0	1	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
c0007	0/0	1404	1	0	0	1	0	0	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/0	388	171	42	33	56	9	30	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
t0002	0/1	388	69	42	13	8	3	2	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
t0003	0/0	388	1	1	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
t0004	0/0	388	1	1	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	142	39	29	45	4	25	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
g0002	0/1	53	27	13	7	3	2	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
g0003	1/0	22	2	3	7	5	4	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
g0004	0/0	6	6	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
g0005	0/0	3	3	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
g0006	0/0	2	2	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
g0007	0/0	2	2	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
g0008	0/0	2	0	0	2	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
g0009	0/0	1	0	1	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
g0010	0/0	1	1	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
g0011	0/0	1	0	0	0	0	1	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
g0012	0/0	1	0	0	1	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
g0013	0/0	1	1	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
g0014	0/0	1	0	0	1	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
g0015	0/0	1	0	0	1	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
g0016	0/0	1	1	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
g0017	0/0	1	1	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
g0018	0/0	1	1	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/0	1404	146	39	30	48	4	25	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
a0002c0002	1/1	1404	78	31	16	15	8	6	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
a0002c0004	0/0	1404	1	1	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
a0003c0003	0/0	1404	14	14	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
a0004c0005	0/0	1404	1	1	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
a0005c0006	0/0	1404	1	0	0	0	0	1	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
a0006c0007	0/0	1404	1	0	0	1	0	0	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	1791	146	39	30	48	4	25	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
a0002c0002t0001	1/0	1791	22	2	3	7	5	4	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
a0002c0002t0002	0/1	1791	55	28	13	8	3	2	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
a0002c0002t0004	0/0	1791	1	1	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
a0002c0004t0003	0/0	1791	1	1	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
a0003c0003t0002	0/0	1791	14	14	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
a0004c0005t0001	0/0	1791	1	1	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
a0005c0006t0001	0/0	1791	1	0	0	0	0	1	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331
a0006c0007t0001	0/0	1791	1	0	0	1	0	0	CCDC71_chr3_49157535_49171331	CCDC71	copy fasta	chr3	49157535	49171331

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	142	39	29	45	4	25	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
a0001c0001t0001g0008	0/0	2	0	0	2	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
a0001c0001t0001g0009	0/0	1	0	1	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
a0001c0001t0001g0015	0/0	1	0	0	1	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
a0002c0002t0001g0003	1/0	22	2	3	7	5	4	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
a0002c0002t0002g0002	0/1	53	27	13	7	3	2	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
a0002c0002t0002g0014	0/0	1	0	0	1	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
a0002c0002t0002g0018	0/0	1	1	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
a0002c0002t0004g0017	0/0	1	1	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
a0002c0004t0003g0016	0/0	1	1	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
a0003c0003t0002g0004	0/0	6	6	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
a0003c0003t0002g0005	0/0	3	3	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
a0003c0003t0002g0006	0/0	2	2	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
a0003c0003t0002g0007	0/0	2	2	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
a0003c0003t0002g0013	0/0	1	1	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
a0004c0005t0001g0010	0/0	1	1	0	0	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
a0005c0006t0001g0011	0/0	1	0	0	0	0	1	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
a0006c0007t0001g0012	0/0	1	0	0	1	0	0	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00140	hp1	a0002	c0002	t0001	g0003	EUR	GBR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG00140	hp2	a0001	c0001	t0001	g0001	EUR	GBR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG00544	hp1	a0002	c0002	t0001	g0003	EAS	CHS	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG00544	hp2	a0001	c0001	t0001	g0001	EAS	CHS	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG00609	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG00609	hp2	a0002	c0002	t0002	g0002	EAS	CHS	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG00639	hp1	a0002	c0002	t0002	g0002	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG00642	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG00733	hp1	a0002	c0002	t0001	g0003	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG00733	hp2	a0002	c0002	t0002	g0002	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG00735	hp2	a0002	c0002	t0002	g0002	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG00738	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG00741	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01070	hp1	a0002	c0002	t0002	g0002	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01070	hp2	a0002	c0002	t0002	g0002	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01071	hp2	a0002	c0002	t0002	g0002	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01074	hp1	a0002	c0002	t0002	g0002	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01074	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01099	hp1	a0002	c0002	t0002	g0002	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01099	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01109	hp1	a0002	c0002	t0002	g0002	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01109	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01175	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01175	hp2	a0002	c0002	t0002	g0002	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01192	hp1	a0002	c0002	t0002	g0002	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01192	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01243	hp1	a0002	c0002	t0002	g0002	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01243	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01255	hp1	a0002	c0002	t0001	g0003	AMR	CLM	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01255	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01515	hp1	a0002	c0002	t0002	g0002	EUR	IBS	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01515	hp2	a0001	c0001	t0001	g0001	EUR	IBS	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01516	hp2	a0002	c0002	t0001	g0003	EUR	IBS	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01517	hp1	a0002	c0002	t0002	g0002	EUR	IBS	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01517	hp2	a0002	c0002	t0001	g0003	EUR	IBS	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01884	hp1	a0002	c0002	t0002	g0002	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01884	hp2	a0003	c0003	t0002	g0013	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01891	hp1	a0004	c0005	t0001	g0010	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01891	hp2	a0001	c0001	t0001	g0001	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01943	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01975	hp1	a0001	c0001	t0001	g0009	AMR	PEL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01981	hp1	a0002	c0002	t0002	g0002	AMR	PEL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02015	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02027	hp2	a0002	c0002	t0002	g0002	EAS	KHV	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02040	hp2	a0006	c0007	t0001	g0012	EAS	KHV	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02055	hp2	a0001	c0001	t0001	g0001	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02135	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02145	hp1	a0003	c0003	t0002	g0004	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02145	hp2	a0001	c0001	t0001	g0001	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02257	hp1	a0002	c0002	t0001	g0003	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02257	hp2	a0003	c0003	t0002	g0004	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02258	hp1	a0003	c0003	t0002	g0005	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02258	hp2	a0001	c0001	t0001	g0001	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02280	hp1	a0002	c0002	t0002	g0002	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02280	hp2	a0001	c0001	t0001	g0001	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02300	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02300	hp2	a0002	c0002	t0001	g0003	AMR	PEL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02451	hp1	a0003	c0003	t0002	g0004	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02451	hp2	a0001	c0001	t0001	g0001	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02572	hp1	a0002	c0002	t0002	g0002	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02572	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02602	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02622	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02622	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02683	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02698	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02717	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02717	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02723	hp1	a0002	c0002	t0002	g0002	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02723	hp2	a0002	c0004	t0003	g0016	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02735	hp1	a0002	c0002	t0001	g0003	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02735	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02738	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02809	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02809	hp2	a0003	c0003	t0002	g0005	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02886	hp1	a0002	c0002	t0002	g0002	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02886	hp2	a0002	c0002	t0002	g0002	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02895	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02895	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02896	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02896	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02922	hp1	a0003	c0003	t0002	g0004	AFR	ESN	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02922	hp2	a0002	c0002	t0002	g0002	AFR	ESN	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02965	hp1	a0002	c0002	t0002	g0002	AFR	ESN	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02965	hp2	a0001	c0001	t0001	g0001	AFR	ESN	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02970	hp1	a0003	c0003	t0002	g0004	AFR	ESN	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02970	hp2	a0001	c0001	t0001	g0001	AFR	ESN	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02976	hp1	a0001	c0001	t0001	g0001	AFR	ESN	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02976	hp2	a0002	c0002	t0002	g0002	AFR	ESN	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03017	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03041	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03041	hp2	a0003	c0003	t0002	g0006	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03098	hp1	a0002	c0002	t0002	g0002	AFR	MSL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03098	hp2	a0001	c0001	t0001	g0001	AFR	MSL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03130	hp1	a0001	c0001	t0001	g0001	AFR	ESN	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03130	hp2	a0001	c0001	t0001	g0001	AFR	ESN	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03139	hp1	a0002	c0002	t0002	g0002	AFR	ESN	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03139	hp2	a0001	c0001	t0001	g0001	AFR	ESN	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03195	hp1	a0002	c0002	t0002	g0002	AFR	ESN	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03195	hp2	a0001	c0001	t0001	g0001	AFR	ESN	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03225	hp1	a0002	c0002	t0002	g0002	AFR	MSL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03225	hp2	a0003	c0003	t0002	g0004	AFR	MSL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03239	hp1	a0002	c0002	t0001	g0003	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03239	hp2	a0005	c0006	t0001	g0011	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03453	hp1	a0003	c0003	t0002	g0007	AFR	MSL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03453	hp2	a0003	c0003	t0002	g0006	AFR	MSL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03486	hp1	a0001	c0001	t0001	g0001	AFR	MSL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03486	hp2	a0001	c0001	t0001	g0001	AFR	MSL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03490	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03492	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03516	hp1	a0001	c0001	t0001	g0001	AFR	ESN	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03516	hp2	a0002	c0002	t0002	g0002	AFR	ESN	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03540	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03540	hp2	a0002	c0002	t0002	g0002	AFR	GWD	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03579	hp1	a0001	c0001	t0001	g0001	AFR	MSL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03579	hp2	a0002	c0002	t0002	g0002	AFR	MSL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03688	hp1	a0002	c0002	t0001	g0003	SAS	STU	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03688	hp2	a0001	c0001	t0001	g0001	SAS	STU	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03710	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03831	hp2	a0002	c0002	t0002	g0002	SAS	BEB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03834	hp1	a0002	c0002	t0001	g0003	SAS	BEB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03834	hp2	a0002	c0002	t0002	g0002	SAS	BEB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG04204	hp2	a0001	c0001	t0001	g0001	SAS	STU	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18522	hp1	a0001	c0001	t0001	g0001	AFR	YRI	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18522	hp2	a0002	c0002	t0002	g0018	AFR	YRI	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18747	hp2	a0002	c0002	t0002	g0002	EAS	CHB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18939	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18939	hp2	a0001	c0001	t0001	g0008	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18940	hp1	a0002	c0002	t0001	g0003	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18940	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18941	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18941	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18942	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18942	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18945	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18951	hp2	a0002	c0002	t0001	g0003	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18954	hp1	a0002	c0002	t0002	g0002	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18966	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18968	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18968	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18970	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18973	hp1	a0002	c0002	t0002	g0002	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18979	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18979	hp2	a0002	c0002	t0002	g0002	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18986	hp1	a0001	c0001	t0001	g0008	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18986	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18994	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18998	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA18998	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19001	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19001	hp2	a0001	c0001	t0001	g0015	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19012	hp1	a0002	c0002	t0002	g0002	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19030	hp1	a0002	c0002	t0002	g0002	AFR	LWK	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19030	hp2	a0002	c0002	t0004	g0017	AFR	LWK	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19043	hp1	a0003	c0003	t0002	g0005	AFR	LWK	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19043	hp2	a0002	c0002	t0002	g0002	AFR	LWK	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19065	hp2	a0002	c0002	t0001	g0003	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19070	hp1	a0002	c0002	t0001	g0003	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19070	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19074	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19079	hp2	a0002	c0002	t0001	g0003	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19080	hp1	a0002	c0002	t0002	g0014	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19080	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19085	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19086	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19086	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19090	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19090	hp2	a0002	c0002	t0001	g0003	EAS	JPT	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19240	hp1	a0001	c0001	t0001	g0001	AFR	YRI	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA19240	hp2	a0002	c0002	t0002	g0002	AFR	YRI	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA20129	hp1	a0001	c0001	t0001	g0001	AFR	ASW	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA20129	hp2	a0002	c0002	t0002	g0002	AFR	ASW	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA20752	hp1	a0002	c0002	t0002	g0002	EUR	TSI	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA20752	hp2	a0002	c0002	t0001	g0003	EUR	TSI	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA20805	hp1	a0002	c0002	t0001	g0003	EUR	TSI	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA20805	hp2	a0001	c0001	t0001	g0001	EUR	TSI	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG01123	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02109	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02109	hp2	a0002	c0002	t0001	g0003	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02486	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02486	hp2	a0002	c0002	t0002	g0002	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02559	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG02559	hp2	a0002	c0002	t0002	g0002	AFR	ACB	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03471	hp1	a0001	c0001	t0001	g0001	AFR	MSL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG03471	hp2	a0002	c0002	t0002	g0002	AFR	MSL	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG06807	hp1	a0002	c0002	t0002	g0002	AFR	USA	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
HG06807	hp2	a0003	c0003	t0002	g0007	AFR	USA	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA20300	hp1	a0002	c0002	t0002	g0002	AFR	USA	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA20300	hp2	a0001	c0001	t0001	g0001	AFR	USA	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA21309	hp1	a0002	c0002	t0002	g0002	AFR	LWK	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
NA21309	hp2	a0002	c0002	t0002	g0002	AFR	LWK	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
homoSapiens_chm13v2	hp1	a0002	c0002	t0002	g0002	REF	REF	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331
homoSapiens_grch38	hp1	a0002	c0002	t0001	g0003	REF	REF	CCDC71_chr3_49157535_49171331	CCDC71	chr3	49157535	49171331

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr3:49162980	C C	A A	1	a0005 a0005	1	HG03239.hp2 HG03239.hp2	missense_variant	MODERATE	c.1229G>T c.1229G>T	p.Arg410Leu p.Arg410Leu	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	2/2	1346/1791	1229/1404	410/467	chr3	49162980
chr3:49163040	C C	T T	1	a0004 a0004	1	HG01891.hp1 HG01891.hp1	missense_variant	MODERATE	c.1169G>A c.1169G>A	p.Arg390Lys p.Arg390Lys	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	2/2	1286/1791	1169/1404	390/467	chr3	49163040
chr3:49163187	T T	C C	1	a0006 a0006	1	HG02040.hp2 HG02040.hp2	missense_variant	MODERATE	c.1022A>G c.1022A>G	p.Lys341Arg p.Lys341Arg	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	2/2	1139/1791	1022/1404	341/467	chr3	49163187
chr3:49163194	A A	G G	5	a0001 a0003 a0004 others(2): Show a0001 a0003 a0004 a0005 a0006	163	HG00140.hp2 HG00544.hp2 HG00609.hp1 others(160): Show HG00140.hp2 HG00544.hp2 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01071.hp1 HG01074.hp2 HG01099.hp2 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01175.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp2 HG01346.hp1 HG01346.hp2 HG01515.hp2 HG01516.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03225.hp2 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG04204.hp1 HG04204.hp2 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18945.hp2 NA18951.hp1 NA18954.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18973.hp2 NA18979.hp1 NA18986.hp1 NA18986.hp2 NA18994.hp1 NA18994.hp2 NA18998.hp1 NA18998.hp2 NA19001.hp1 NA19001.hp2 NA19012.hp2 NA19043.hp1 NA19065.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19080.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19090.hp1 NA19240.hp1 NA20129.hp1 NA20300.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2	missense_variant	MODERATE	c.1015T>C c.1015T>C	p.Trp339Arg p.Trp339Arg	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	2/2	1132/1791	1015/1404	339/467	chr3	49163194
chr3:49163259	T T	A A	4	a0001 a0004 a0005 others(1): Show a0001 a0004 a0005 a0006	149	HG00140.hp2 HG00544.hp2 HG00609.hp1 others(146): Show HG00140.hp2 HG00544.hp2 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01071.hp1 HG01074.hp2 HG01099.hp2 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01175.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp2 HG01346.hp1 HG01346.hp2 HG01515.hp2 HG01516.hp1 HG01891.hp1 HG01891.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02258.hp2 HG02280.hp2 HG02300.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02965.hp2 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03239.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG04204.hp1 HG04204.hp2 NA18522.hp1 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18945.hp2 NA18951.hp1 NA18954.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18973.hp2 NA18979.hp1 NA18986.hp1 NA18986.hp2 NA18994.hp1 NA18994.hp2 NA18998.hp1 NA18998.hp2 NA19001.hp1 NA19001.hp2 NA19012.hp2 NA19065.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19080.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19090.hp1 NA19240.hp1 NA20129.hp1 NA20300.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2	missense_variant	MODERATE	c.950A>T c.950A>T	p.Gln317Leu p.Gln317Leu	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	2/2	1067/1791	950/1404	317/467	chr3	49163259

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chr3:49163213	C C	T T	1	a0002c0004 a0002c0004	1	HG02723.hp2 HG02723.hp2	synonymous_variant	LOW	c.996G>A c.996G>A	p.Lys332Lys p.Lys332Lys	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	2/2	1113/1791	996/1404	332/467			chr3	49163213

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr3:49162604	C C	T T	1	a0002c0002t0004 a0002c0002t0004	1	NA19030.hp2 NA19030.hp2	3_prime_UTR_variant	MODIFIER	c.201G>A c.201G>A	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	2/2	201	chr3	49162604
chr3:49162668	G G	T T	1	a0002c0004t0003 a0002c0004t0003	1	HG02723.hp2 HG02723.hp2	3_prime_UTR_variant	MODIFIER	c.137C>A c.137C>A	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	2/2	137	chr3	49162668
chr3:49162704	G G	T T	4	a0002c0002t0002 a0002c0002t0004 a0002c0004t0003 others(1): Show a0002c0002t0002 a0002c0002t0004 a0002c0004t0003 a0003c0003t0002	71	HG00609.hp2 HG00639.hp1 HG00733.hp2 others(68): Show HG00609.hp2 HG00639.hp1 HG00733.hp2 HG00735.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01099.hp1 HG01109.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01515.hp1 HG01517.hp1 HG01884.hp1 HG01884.hp2 HG01981.hp1 HG02027.hp2 HG02145.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02486.hp2 HG02559.hp2 HG02572.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp1 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp2 HG03831.hp2 HG03834.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18747.hp2 NA18954.hp1 NA18973.hp1 NA18979.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19080.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20752.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.101C>A c.101C>A	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	2/2	101	chr3	49162704

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr3:49164363	A A	C C	2	a0003c0003t0002g0006 a0003c0003t0002g0007 a0003c0003t0002g0006 a0003c0003t0002g0007	4	HG03041.hp2 HG03453.hp1 HG03453.hp2 others(1): Show HG03041.hp2 HG03453.hp1 HG03453.hp2 HG06807.hp2	intron_variant	MODIFIER	c.-52-103T>G c.-52-103T>G	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	1/1	chr3	49164363
chr3:49164457	T T	G G	1	a0003c0003t0002g0005 a0003c0003t0002g0005	3	HG02258.hp1 HG02809.hp2 NA19043.hp1 HG02258.hp1 HG02809.hp2 NA19043.hp1	intron_variant	MODIFIER	c.-52-197A>C c.-52-197A>C	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	1/1	chr3	49164457
chr3:49164793	G G	C C	1	a0002c0002t0002g0018 a0002c0002t0002g0018	1	NA18522.hp2 NA18522.hp2	intron_variant	MODIFIER	c.-52-533C>G c.-52-533C>G	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	1/1	chr3	49164793
chr3:49164886	G G	C C	1	a0003c0003t0002g0007 a0003c0003t0002g0007	2	HG03453.hp1 HG06807.hp2 HG03453.hp1 HG06807.hp2	intron_variant	MODIFIER	c.-52-626C>G c.-52-626C>G	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	1/1	chr3	49164886
chr3:49164907	T T	G G	1	a0003c0003t0002g0013 a0003c0003t0002g0013	1	HG01884.hp2 HG01884.hp2	intron_variant	MODIFIER	c.-52-647A>C c.-52-647A>C	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	1/1	chr3	49164907
chr3:49165349	C C	G G	12	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 others(9): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0015 a0003c0003t0002g0004 a0003c0003t0002g0005 a0003c0003t0002g0006 a0003c0003t0002g0007 a0003c0003t0002g0013 a0004c0005t0001g0010 a0005c0006t0001g0011 a0006c0007t0001g0012	163	HG00140.hp2 HG00544.hp2 HG00609.hp1 others(160): Show HG00140.hp2 HG00544.hp2 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01071.hp1 HG01074.hp2 HG01099.hp2 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01175.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp2 HG01346.hp1 HG01346.hp2 HG01515.hp2 HG01516.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03225.hp2 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG04204.hp1 HG04204.hp2 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18945.hp2 NA18951.hp1 NA18954.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18973.hp2 NA18979.hp1 NA18986.hp1 NA18986.hp2 NA18994.hp1 NA18994.hp2 NA18998.hp1 NA18998.hp2 NA19001.hp1 NA19001.hp2 NA19012.hp2 NA19043.hp1 NA19065.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19080.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19090.hp1 NA19240.hp1 NA20129.hp1 NA20300.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2	intron_variant	MODIFIER	c.-53+918G>C c.-53+918G>C	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	1/1	chr3	49165349
chr3:49165441	G G	A A	1	a0001c0001t0001g0008 a0001c0001t0001g0008	2	NA18939.hp2 NA18986.hp1 NA18939.hp2 NA18986.hp1	intron_variant	MODIFIER	c.-53+826C>T c.-53+826C>T	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	1/1	chr3	49165441
chr3:49165674	T T	A A	1	a0001c0001t0001g0008 a0001c0001t0001g0008	2	NA18939.hp2 NA18986.hp1 NA18939.hp2 NA18986.hp1	intron_variant	MODIFIER	c.-53+593A>T c.-53+593A>T	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	1/1	chr3	49165674
chr3:49165767	C C	T T	1	a0001c0001t0001g0009 a0001c0001t0001g0009	1	HG01975.hp1 HG01975.hp1	intron_variant	MODIFIER	c.-53+500G>A c.-53+500G>A	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	1/1	chr3	49165767
chr3:49165777	C C	A A	1	a0001c0001t0001g0015 a0001c0001t0001g0015	1	NA19001.hp2 NA19001.hp2	intron_variant	MODIFIER	c.-53+490G>T c.-53+490G>T	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	1/1	chr3	49165777
chr3:49166143	TG TG	T T	13	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 others(10): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0015 a0002c0002t0002g0014 a0003c0003t0002g0004 a0003c0003t0002g0005 a0003c0003t0002g0006 a0003c0003t0002g0007 a0003c0003t0002g0013 a0004c0005t0001g0010 a0005c0006t0001g0011 a0006c0007t0001g0012	164	HG00140.hp2 HG00544.hp2 HG00609.hp1 others(161): Show HG00140.hp2 HG00544.hp2 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01071.hp1 HG01074.hp2 HG01099.hp2 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01175.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp2 HG01346.hp1 HG01346.hp2 HG01515.hp2 HG01516.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01943.hp1 HG01943.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02622.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03225.hp2 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG04204.hp1 HG04204.hp2 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18945.hp2 NA18951.hp1 NA18954.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18973.hp2 NA18979.hp1 NA18986.hp1 NA18986.hp2 NA18994.hp1 NA18994.hp2 NA18998.hp1 NA18998.hp2 NA19001.hp1 NA19001.hp2 NA19012.hp2 NA19043.hp1 NA19065.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19090.hp1 NA19240.hp1 NA20129.hp1 NA20300.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2	intron_variant	MODIFIER	c.-53+123delC c.-53+123delC	CCDC71	ENSG00000177352.10	transcript	ENST00000321895.7	protein_coding	1/1	chr3	49166143

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🧬 JoGo Online Haplotype Explorer CCDC71_chr3_49157535_49171331

JoGo Local Haplotype Explorer (on iGV) CCDC71_chr3_49157535_49171331

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 6)

CCoding Level Haplotype Info (Total: 7)

TTranscript Level Haplotype Info (Total: 4)

GGenebody Level Haplotype Info (Total: 18)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 7)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 9)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 18)

Haplotype Details by Sample (Haploid Level) (Total: 242)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 5)

CCoding Level Variants (Synonymous Mutations) (Total: 1)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 3)

GGenebody Level Haplotype Variants (Intron) (Total: 11)

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Annotation (Repeats)

Annotation (SNP Array)