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geneid	959
ensemblid	ENSG00000102245.9
hgncid	11935
symbol	CD40LG
name	CD40 ligand
refseq_nuc	NM_000074.3
refseq_prot	NP_000065.1
ensembl_nuc	ENST00000370629.7
ensembl_prot	ENSP00000359663.2
mane_status	MANE Select
chr	chrX
start	136648158
end	136660390
strand	+
ver	v1.2
region	chrX:136648158-136660390
region5000	chrX:136643158-136665390
regionname0	CD40LG_chrX_136648158_136660390
regionname5000	CD40LG_chrX_136643158_136665390

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	261	283	76	53	111	12	29	83	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0002	0/0	261	2	0	0	1	0	1	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0003	0/0	261	1	0	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0004	0/0	126	1	0	0	1	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	786	215	61	29	93	12	18	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
c0002	0/0	786	63	12	24	16	0	11	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
c0003	0/0	786	2	0	0	1	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
c0004	0/0	786	2	0	0	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
c0005	0/0	786	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
c0006	0/0	786	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
c0007	0/0	786	1	0	0	0	1	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
c0008	0/0	785	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/0	1068	33	0	10	17	2	4	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0002	1/0	1067	22	0	5	13	2	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0003	0/0	1066	14	1	1	12	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0004	0/0	1069	13	1	0	8	1	3	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0005	0/0	1059	11	2	2	6	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0006	0/0	1067	10	2	4	4	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0007	0/0	1065	10	4	2	3	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0008	0/0	1066	9	0	1	5	1	2	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0009	0/0	1068	9	0	3	5	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0010	0/0	1058	8	1	2	5	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0011	0/0	1075	7	7	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0012	0/0	1069	6	0	0	5	1	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0013	0/0	1071	6	2	2	0	1	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0014	0/0	1070	5	0	1	2	1	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0015	0/0	1076	5	5	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0016	0/0	1073	5	4	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0017	0/0	1062	4	3	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0018	0/0	1072	3	0	0	2	1	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0019	0/0	1070	3	1	0	0	1	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0020	0/0	1064	3	0	1	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0021	0/0	1060	3	0	0	2	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0022	0/0	1069	3	0	1	1	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0023	0/0	1061	3	0	2	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0024	0/0	1064	3	2	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0025	0/0	1060	3	0	1	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0026	0/0	1059	3	1	2	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0027	0/0	1074	3	3	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0028	0/0	1074	2	0	0	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0029	0/0	1067	2	0	1	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0030	0/0	1061	2	0	0	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0031	0/0	1072	2	0	0	0	0	2	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0032	0/0	1075	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0033	0/0	1063	2	0	2	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0034	0/0	1043	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0035	0/0	1068	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0036	0/0	1066	2	0	0	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0037	0/0	1042	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0038	0/0	1041	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0039	0/0	1039	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0040	0/0	1060	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0041	0/0	1058	2	0	2	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0042	0/0	1057	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0043	0/0	1062	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0044	0/0	1067	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0045	0/0	1066	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0046	0/0	1061	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0047	0/0	1059	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0048	0/0	1070	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0049	0/0	1058	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0050	0/0	1059	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0051	0/0	1065	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0052	0/0	1072	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0053	0/0	1072	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0054	0/0	1075	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0055	0/0	1071	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0056	0/0	1074	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0057	0/0	1064	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0058	0/0	1060	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0059	0/0	1071	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0060	0/0	1065	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0061	0/1	1051	1	0	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0062	0/0	1047	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0063	0/0	1062	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0064	0/0	1054	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0065	0/0	1079	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0066	0/0	1077	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0067	0/0	1073	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0068	0/0	1053	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0069	0/0	1041	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0070	0/0	1065	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0071	0/0	1078	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0072	0/0	1072	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0073	0/0	1070	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0074	0/0	1056	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0075	0/0	1044	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0076	0/0	1066	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0077	0/0	1063	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0078	0/0	1066	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0079	0/0	1077	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0080	0/0	1061	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0081	0/0	1059	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0082	0/0	1067	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0083	0/0	1073	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0084	0/0	1078	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0085	0/0	1072	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0086	0/0	1069	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0087	0/0	1079	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0088	0/0	1077	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0089	0/0	1074	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0090	0/0	1072	1	0	0	0	1	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0091	0/0	1069	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
t0092	0/0	1067	1	0	0	0	1	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/1	125	12	22	64	9	16	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0002	0/0	23	8	7	6	0	2	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0003	0/0	21	21	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0004	0/0	12	0	0	12	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0005	0/0	11	0	2	8	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0006	0/0	10	0	9	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0007	0/0	5	0	2	0	3	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0008	0/0	5	5	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0009	0/0	4	0	0	4	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0010	0/0	4	2	1	0	1	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0011	0/0	3	0	0	0	0	3	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0012	0/0	3	0	0	3	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0013	0/0	3	3	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0014	0/0	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0015	0/0	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0016	0/0	2	0	0	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0017	0/0	2	0	2	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0018	0/0	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0019	0/0	2	0	0	1	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0020	0/0	2	1	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0021	0/0	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0022	0/0	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0023	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0024	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0025	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0026	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0027	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0028	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0029	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0030	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0031	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0032	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0033	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0034	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0035	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0036	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0037	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0038	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0039	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0040	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0041	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0042	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0043	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0044	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0045	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0046	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0047	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0048	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0049	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0050	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0051	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0052	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0053	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0054	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0055	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0056	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0057	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0058	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0059	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0060	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0061	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
g0062	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	786	215	61	29	93	12	18	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002	0/0	786	63	12	24	16	0	11	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0004	0/0	786	2	0	0	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0005	0/0	786	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0006	0/0	786	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0002c0003	0/0	786	2	0	0	1	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0003c0007	0/0	786	1	0	0	0	1	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0004c0008	0/0	785	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	1853	30	0	10	16	2	2	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0002	1/0	1852	17	0	0	13	2	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0003	0/0	1851	13	1	0	12	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0004	0/0	1854	11	1	0	8	1	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0005	0/0	1844	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0006	0/0	1852	6	1	1	4	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0007	0/0	1850	9	3	2	3	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0008	0/0	1851	7	0	1	3	1	2	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0009	0/0	1853	8	0	2	5	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0010	0/0	1843	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0011	0/0	1860	7	7	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0012	0/0	1854	6	0	0	5	1	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0013	0/0	1856	4	1	1	0	1	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0014	0/0	1855	5	0	1	2	1	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0015	0/0	1861	5	5	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0016	0/0	1858	5	4	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0017	0/0	1847	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0018	0/0	1857	2	0	0	1	1	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0019	0/0	1855	2	1	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0020	0/0	1849	3	0	1	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0022	0/0	1854	2	0	0	1	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0024	0/0	1849	3	2	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0026	0/0	1844	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0027	0/0	1859	3	3	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0028	0/0	1859	2	0	0	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0029	0/0	1852	2	0	1	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0030	0/0	1846	2	0	0	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0031	0/0	1857	2	0	0	0	0	2	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0032	0/0	1860	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0033	0/0	1848	2	0	2	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0034	0/0	1828	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0035	0/0	1853	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0036	0/0	1851	2	0	0	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0037	0/0	1827	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0038	0/0	1826	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0039	0/0	1824	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0042	0/0	1842	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0043	0/0	1847	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0044	0/0	1852	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0045	0/0	1851	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0046	0/0	1846	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0047	0/0	1844	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0051	0/0	1850	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0052	0/0	1857	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0053	0/0	1857	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0054	0/0	1860	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0055	0/0	1856	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0056	0/0	1859	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0058	0/0	1845	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0059	0/0	1856	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0060	0/0	1850	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0061	0/1	1836	1	0	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0062	0/0	1832	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0065	0/0	1864	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0066	0/0	1862	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0067	0/0	1858	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0070	0/0	1850	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0071	0/0	1863	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0072	0/0	1857	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0073	0/0	1855	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0076	0/0	1851	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0077	0/0	1848	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0079	0/0	1862	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0082	0/0	1852	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0083	0/0	1858	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0084	0/0	1863	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0085	0/0	1857	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0086	0/0	1854	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0087	0/0	1864	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0088	0/0	1862	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0089	0/0	1859	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0090	0/0	1857	1	0	0	0	1	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0091	0/0	1854	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0001t0092	0/0	1852	1	0	0	0	1	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0001	0/0	1853	3	0	0	1	0	2	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0002	0/0	1852	5	0	5	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0003	0/0	1851	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0004	0/0	1854	2	0	0	0	0	2	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0005	0/0	1844	10	1	2	6	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0006	0/0	1852	4	1	3	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0007	0/0	1850	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0009	0/0	1853	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0010	0/0	1843	7	1	2	4	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0013	0/0	1856	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0017	0/0	1847	3	2	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0021	0/0	1845	3	0	0	2	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0022	0/0	1854	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0023	0/0	1846	3	0	2	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0025	0/0	1845	3	0	1	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0026	0/0	1844	2	1	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0040	0/0	1845	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0041	0/0	1843	2	0	2	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0048	0/0	1855	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0049	0/0	1843	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0050	0/0	1844	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0057	0/0	1849	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0063	0/0	1847	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0069	0/0	1826	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0074	0/0	1841	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0075	0/0	1829	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0002t0078	0/0	1851	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0004t0008	0/0	1851	2	0	0	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0005t0064	0/0	1839	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0005t0068	0/0	1838	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0001c0006t0013	0/0	1856	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0002c0003t0080	0/0	1846	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0002c0003t0081	0/0	1844	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0003c0007t0019	0/0	1855	1	0	0	0	1	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390
a0004c0008t0018	0/0	1856	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	copy fasta	chrX	136643158	136665390

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	23	0	8	12	1	2	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0001g0007	0/0	3	0	2	0	1	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0001g0012	0/0	2	0	0	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0001g0030	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0001g0044	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0002g0001	1/0	15	0	0	11	2	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0002g0039	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0002g0057	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0003g0001	0/0	7	1	0	6	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0003g0004	0/0	4	0	0	4	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0003g0026	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0003g0041	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0004g0001	0/0	11	1	0	8	1	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0005g0021	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0006g0001	0/0	3	0	1	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0006g0004	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0006g0021	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0006g0056	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0007g0001	0/0	7	3	2	1	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0007g0004	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0007g0042	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0008g0001	0/0	5	0	1	2	1	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0008g0032	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0008g0055	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0009g0001	0/0	3	0	2	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0009g0004	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0009g0009	0/0	3	0	0	3	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0009g0033	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0010g0002	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0011g0003	0/0	7	7	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0012g0001	0/0	3	0	0	3	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0012g0004	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0012g0007	0/0	1	0	0	0	1	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0012g0009	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0013g0001	0/0	2	0	0	0	1	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0013g0008	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0013g0052	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0014g0001	0/0	4	0	1	2	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0014g0007	0/0	1	0	0	0	1	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0015g0003	0/0	4	4	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0015g0059	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0016g0003	0/0	3	3	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0016g0010	0/0	2	1	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0017g0047	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0018g0001	0/0	2	0	0	1	1	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0019g0001	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0019g0049	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0020g0001	0/0	2	0	1	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0020g0004	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0022g0001	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0022g0004	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0024g0001	0/0	2	1	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0024g0060	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0026g0002	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0027g0003	0/0	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0027g0010	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0028g0001	0/0	2	0	0	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0029g0001	0/0	2	0	1	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0030g0001	0/0	2	0	0	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0031g0001	0/0	2	0	0	0	0	2	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0032g0008	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0032g0014	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0033g0001	0/0	2	0	2	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0034g0013	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0034g0062	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0035g0001	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0035g0008	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0036g0004	0/0	2	0	0	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0037g0013	0/0	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0038g0022	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0038g0023	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0039g0022	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0039g0048	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0042g0018	0/0	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0043g0001	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0044g0001	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0045g0001	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0046g0020	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0047g0020	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0051g0001	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0052g0046	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0053g0001	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0054g0001	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0055g0001	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0056g0001	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0058g0001	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0059g0001	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0060g0001	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0061g0001	0/1	1	0	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0062g0001	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0065g0001	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0066g0012	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0067g0008	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0070g0001	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0071g0029	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0072g0014	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0073g0008	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0076g0001	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0077g0001	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0079g0028	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0082g0001	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0083g0003	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0084g0003	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0085g0061	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0086g0043	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0087g0034	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0088g0003	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0089g0003	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0090g0010	0/0	1	0	0	0	1	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0091g0003	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0001t0092g0001	0/0	1	0	0	0	1	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0001g0001	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0001g0011	0/0	2	0	0	0	0	2	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0002g0006	0/0	5	0	5	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0003g0053	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0004g0011	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0004g0024	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0005g0002	0/0	4	0	1	3	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0005g0005	0/0	4	0	1	3	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0005g0027	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0005g0045	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0006g0006	0/0	3	0	3	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0006g0031	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0007g0002	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0009g0006	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0010g0002	0/0	2	1	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0010g0005	0/0	3	0	1	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0010g0016	0/0	2	0	0	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0013g0054	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0017g0002	0/0	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0017g0035	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0021g0002	0/0	2	0	0	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0021g0058	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0022g0002	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0023g0002	0/0	2	0	2	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0023g0005	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0025g0005	0/0	2	0	0	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0025g0036	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0026g0002	0/0	2	1	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0040g0002	0/0	2	2	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0041g0017	0/0	2	0	2	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0048g0006	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0049g0005	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0050g0040	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0057g0025	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0063g0002	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0069g0038	0/0	1	0	1	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0074g0037	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0075g0002	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0002t0078g0002	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0004t0008g0001	0/0	2	0	0	2	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0005t0064g0015	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0005t0068g0015	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0001c0006t0013g0050	0/0	1	1	0	0	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0002c0003t0080g0019	0/0	1	0	0	0	0	1	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0002c0003t0081g0019	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0003c0007t0019g0001	0/0	1	0	0	0	1	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
a0004c0008t0018g0051	0/0	1	0	0	1	0	0	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0018	g0001	EUR	GBR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00099	hp2	a0001	c0001	t0012	g0007	EUR	GBR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00140	hp1	a0003	c0007	t0019	g0001	EUR	GBR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00280	hp1	a0001	c0001	t0002	g0001	EUR	FIN	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00323	hp1	a0001	c0001	t0092	g0001	EUR	FIN	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00323	hp2	a0001	c0001	t0013	g0001	EUR	FIN	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00408	hp1	a0001	c0001	t0009	g0009	EAS	CHS	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00408	hp2	a0001	c0001	t0003	g0041	EAS	CHS	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00423	hp1	a0001	c0001	t0012	g0009	EAS	CHS	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00423	hp2	a0001	c0002	t0049	g0005	EAS	CHS	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00438	hp1	a0001	c0002	t0010	g0016	EAS	CHS	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00438	hp2	a0001	c0001	t0018	g0001	EAS	CHS	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00609	hp1	a0001	c0001	t0006	g0001	EAS	CHS	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00621	hp1	a0001	c0001	t0009	g0033	EAS	CHS	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00639	hp1	a0001	c0001	t0033	g0001	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00639	hp2	a0001	c0001	t0033	g0001	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00673	hp1	a0001	c0004	t0008	g0001	EAS	CHS	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00733	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00733	hp2	a0001	c0002	t0002	g0006	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00735	hp1	a0001	c0001	t0020	g0001	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00735	hp2	a0001	c0002	t0026	g0002	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00738	hp1	a0001	c0001	t0014	g0001	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00741	hp1	a0001	c0002	t0005	g0005	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01069	hp1	a0001	c0002	t0006	g0006	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01071	hp1	a0001	c0002	t0006	g0006	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01074	hp1	a0001	c0001	t0007	g0001	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01081	hp1	a0001	c0002	t0013	g0054	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01081	hp2	a0001	c0001	t0013	g0052	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01099	hp1	a0001	c0001	t0001	g0007	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01109	hp1	a0001	c0001	t0071	g0029	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01167	hp1	a0001	c0002	t0041	g0017	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01168	hp1	a0001	c0002	t0025	g0036	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01168	hp2	a0001	c0001	t0029	g0001	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01169	hp1	a0001	c0002	t0041	g0017	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01169	hp2	a0001	c0001	t0008	g0001	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01175	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01192	hp1	a0001	c0001	t0009	g0001	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01243	hp1	a0001	c0002	t0069	g0038	AMR	PUR	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01255	hp1	a0001	c0002	t0017	g0035	AMR	CLM	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01256	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01257	hp1	a0001	c0002	t0002	g0006	AMR	CLM	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01257	hp2	a0001	c0002	t0023	g0002	AMR	CLM	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01258	hp1	a0001	c0002	t0023	g0002	AMR	CLM	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01261	hp1	a0001	c0002	t0022	g0002	AMR	CLM	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01346	hp1	a0001	c0002	t0002	g0006	AMR	CLM	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01346	hp2	a0001	c0001	t0001	g0007	AMR	CLM	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01358	hp1	a0001	c0001	t0045	g0001	AMR	CLM	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01433	hp1	a0001	c0002	t0003	g0053	AMR	CLM	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01496	hp1	a0001	c0001	t0046	g0020	AMR	CLM	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01496	hp2	a0001	c0001	t0056	g0001	AMR	CLM	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01516	hp1	a0001	c0001	t0002	g0001	EUR	IBS	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01516	hp2	a0001	c0001	t0001	g0007	EUR	IBS	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01517	hp1	a0001	c0001	t0004	g0001	EUR	IBS	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01517	hp2	a0001	c0001	t0014	g0007	EUR	IBS	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01884	hp1	a0001	c0001	t0027	g0010	AFR	ACB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01884	hp2	a0001	c0001	t0024	g0060	AFR	ACB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01891	hp1	a0001	c0006	t0013	g0050	AFR	ACB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01891	hp2	a0001	c0002	t0040	g0002	AFR	ACB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01928	hp1	a0001	c0002	t0002	g0006	AMR	PEL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01934	hp1	a0001	c0001	t0006	g0001	AMR	PEL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01943	hp1	a0001	c0002	t0006	g0006	AMR	PEL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01952	hp1	a0001	c0002	t0010	g0005	AMR	PEL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01981	hp1	a0001	c0002	t0005	g0002	AMR	PEL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01981	hp2	a0001	c0001	t0059	g0001	AMR	PEL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01993	hp1	a0001	c0002	t0009	g0006	AMR	PEL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01993	hp2	a0001	c0001	t0009	g0001	AMR	PEL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02004	hp1	a0001	c0001	t0026	g0002	AMR	PEL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02004	hp2	a0001	c0002	t0002	g0006	AMR	PEL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02027	hp1	a0001	c0001	t0012	g0004	EAS	KHV	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02040	hp1	a0001	c0001	t0020	g0001	EAS	KHV	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02055	hp1	a0001	c0001	t0083	g0003	AFR	ACB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02056	hp1	a0001	c0001	t0003	g0001	EAS	KHV	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02071	hp1	a0001	c0001	t0028	g0001	EAS	KHV	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02080	hp1	a0001	c0001	t0004	g0001	EAS	KHV	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02080	hp2	a0002	c0003	t0081	g0019	EAS	KHV	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02083	hp1	a0001	c0001	t0053	g0001	EAS	KHV	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02129	hp1	a0001	c0001	t0014	g0001	EAS	KHV	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02135	hp1	a0001	c0001	t0004	g0001	EAS	KHV	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02145	hp1	a0001	c0002	t0005	g0045	AFR	ACB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02155	hp1	a0001	c0001	t0001	g0001	EAS	CDX	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02155	hp2	a0001	c0001	t0001	g0001	EAS	CDX	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02165	hp1	a0001	c0001	t0014	g0001	EAS	CDX	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02165	hp2	a0001	c0001	t0001	g0044	EAS	CDX	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02257	hp1	a0001	c0001	t0011	g0003	AFR	ACB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02257	hp2	a0001	c0001	t0013	g0008	AFR	ACB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02258	hp1	a0001	c0001	t0076	g0001	AFR	ACB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02280	hp1	a0001	c0001	t0037	g0013	AFR	ACB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02280	hp2	a0001	c0001	t0019	g0001	AFR	ACB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02300	hp1	a0001	c0002	t0010	g0002	AMR	PEL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02451	hp1	a0001	c0001	t0079	g0028	AFR	ACB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02451	hp2	a0001	c0001	t0035	g0008	AFR	ACB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02523	hp1	a0001	c0001	t0006	g0001	EAS	KHV	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02523	hp2	a0001	c0001	t0010	g0002	EAS	KHV	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02572	hp1	a0001	c0001	t0017	g0047	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02602	hp1	a0001	c0002	t0023	g0005	SAS	PJL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02615	hp1	a0001	c0002	t0078	g0002	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02615	hp2	a0001	c0001	t0034	g0013	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02630	hp1	a0001	c0001	t0011	g0003	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02630	hp2	a0001	c0001	t0038	g0022	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02647	hp1	a0001	c0001	t0015	g0003	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02698	hp1	a0001	c0001	t0007	g0001	SAS	PJL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02717	hp1	a0001	c0001	t0077	g0001	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02735	hp1	a0001	c0001	t0004	g0001	SAS	PJL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02738	hp1	a0001	c0001	t0014	g0001	SAS	PJL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02809	hp1	a0001	c0001	t0015	g0003	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02809	hp2	a0001	c0001	t0067	g0008	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02818	hp1	a0001	c0001	t0039	g0022	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02818	hp2	a0001	c0001	t0037	g0013	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02886	hp1	a0001	c0001	t0011	g0003	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02886	hp2	a0001	c0001	t0039	g0048	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02895	hp1	a0001	c0001	t0088	g0003	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02896	hp1	a0001	c0002	t0050	g0040	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02896	hp2	a0001	c0001	t0072	g0014	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02897	hp1	a0001	c0001	t0032	g0014	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02897	hp2	a0001	c0001	t0084	g0003	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02965	hp1	a0001	c0001	t0006	g0021	AFR	ESN	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02970	hp1	a0001	c0002	t0017	g0002	AFR	ESN	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02970	hp2	a0001	c0001	t0035	g0001	AFR	ESN	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02976	hp1	a0001	c0002	t0017	g0002	AFR	ESN	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02976	hp2	a0001	c0001	t0011	g0003	AFR	ESN	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03017	hp1	a0001	c0001	t0002	g0001	SAS	PJL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03041	hp1	a0001	c0001	t0005	g0021	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03041	hp2	a0001	c0001	t0044	g0001	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03098	hp1	a0001	c0001	t0091	g0003	AFR	MSL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03130	hp1	a0001	c0001	t0038	g0023	AFR	ESN	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03139	hp1	a0001	c0001	t0085	g0061	AFR	ESN	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03195	hp1	a0001	c0001	t0007	g0001	AFR	ESN	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03195	hp2	a0001	c0001	t0016	g0003	AFR	ESN	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03209	hp1	a0001	c0002	t0074	g0037	AFR	MSL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03225	hp1	a0001	c0001	t0016	g0003	AFR	MSL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03239	hp1	a0001	c0001	t0031	g0001	SAS	PJL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03239	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03453	hp1	a0001	c0001	t0089	g0003	AFR	MSL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03453	hp2	a0001	c0001	t0060	g0001	AFR	MSL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03486	hp1	a0001	c0002	t0006	g0031	AFR	MSL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03486	hp2	a0001	c0002	t0007	g0002	AFR	MSL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03490	hp1	a0001	c0002	t0075	g0002	SAS	PJL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03491	hp1	a0001	c0001	t0008	g0001	SAS	PJL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03491	hp2	a0001	c0002	t0001	g0011	SAS	PJL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03492	hp1	a0001	c0002	t0001	g0011	SAS	PJL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03516	hp1	a0001	c0001	t0011	g0003	AFR	ESN	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03516	hp2	a0001	c0002	t0040	g0002	AFR	ESN	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03540	hp1	a0001	c0001	t0015	g0003	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03540	hp2	a0001	c0005	t0068	g0015	AFR	GWD	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03579	hp1	a0001	c0001	t0007	g0001	AFR	MSL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03654	hp1	a0001	c0001	t0013	g0001	SAS	PJL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03688	hp1	a0001	c0001	t0008	g0055	SAS	STU	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03704	hp1	a0001	c0001	t0070	g0001	SAS	PJL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03710	hp1	a0001	c0002	t0004	g0011	SAS	PJL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03831	hp1	a0001	c0002	t0005	g0027	SAS	BEB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03831	hp2	a0001	c0002	t0063	g0002	SAS	BEB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03834	hp1	a0001	c0001	t0022	g0001	SAS	BEB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03834	hp2	a0001	c0002	t0004	g0024	SAS	BEB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03927	hp1	a0001	c0001	t0054	g0001	SAS	BEB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03927	hp2	a0001	c0001	t0055	g0001	SAS	BEB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03942	hp1	a0001	c0001	t0031	g0001	SAS	BEB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG04115	hp1	a0001	c0002	t0057	g0025	SAS	STU	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG04184	hp1	a0001	c0001	t0051	g0001	SAS	BEB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG04184	hp2	a0001	c0001	t0019	g0049	SAS	BEB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG04199	hp1	a0001	c0002	t0021	g0058	SAS	STU	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG04204	hp1	a0001	c0002	t0048	g0006	SAS	STU	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG04228	hp1	a0002	c0003	t0080	g0019	SAS	STU	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18522	hp1	a0001	c0001	t0042	g0018	AFR	YRI	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18612	hp1	a0001	c0001	t0004	g0001	EAS	CHB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18747	hp1	a0001	c0001	t0002	g0001	EAS	CHB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18906	hp1	a0001	c0001	t0047	g0020	AFR	YRI	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18906	hp2	a0001	c0001	t0016	g0003	AFR	YRI	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18940	hp1	a0001	c0002	t0005	g0002	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18942	hp1	a0001	c0002	t0010	g0005	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18942	hp2	a0001	c0001	t0006	g0056	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18943	hp1	a0001	c0001	t0004	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18944	hp1	a0001	c0002	t0005	g0002	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18945	hp1	a0001	c0001	t0002	g0039	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18946	hp1	a0001	c0001	t0002	g0057	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18946	hp2	a0001	c0001	t0009	g0009	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18947	hp1	a0001	c0001	t0009	g0004	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18947	hp2	a0001	c0001	t0004	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18948	hp1	a0001	c0001	t0003	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18949	hp1	a0001	c0002	t0021	g0002	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18949	hp2	a0001	c0001	t0003	g0004	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18950	hp1	a0001	c0002	t0025	g0005	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18950	hp2	a0001	c0001	t0008	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18951	hp1	a0001	c0001	t0030	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18951	hp2	a0001	c0001	t0030	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18952	hp1	a0001	c0001	t0003	g0004	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18953	hp1	a0001	c0001	t0012	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18954	hp1	a0001	c0002	t0005	g0005	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18954	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18959	hp1	a0001	c0002	t0021	g0002	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18960	hp1	a0001	c0002	t0010	g0005	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18961	hp1	a0001	c0002	t0005	g0005	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18962	hp1	a0001	c0001	t0001	g0030	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18963	hp1	a0001	c0001	t0065	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18963	hp2	a0001	c0001	t0066	g0012	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18965	hp1	a0001	c0001	t0062	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18967	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18968	hp1	a0001	c0001	t0007	g0004	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18968	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18970	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18971	hp1	a0001	c0001	t0087	g0034	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18974	hp1	a0001	c0001	t0003	g0026	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18975	hp1	a0001	c0001	t0003	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18975	hp2	a0001	c0001	t0006	g0004	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18977	hp1	a0001	c0002	t0001	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18980	hp1	a0001	c0001	t0082	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18980	hp2	a0001	c0001	t0003	g0004	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18982	hp1	a0001	c0001	t0024	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18988	hp1	a0004	c0008	t0018	g0051	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18989	hp1	a0001	c0001	t0004	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18990	hp1	a0001	c0001	t0028	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18994	hp1	a0001	c0001	t0003	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18995	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19000	hp1	a0001	c0001	t0004	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19004	hp1	a0001	c0001	t0009	g0009	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19005	hp1	a0001	c0001	t0004	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19006	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19007	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19012	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19030	hp1	a0001	c0001	t0042	g0018	AFR	LWK	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19030	hp2	a0001	c0001	t0015	g0059	AFR	LWK	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19043	hp1	a0001	c0005	t0064	g0015	AFR	LWK	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19055	hp1	a0001	c0001	t0043	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19056	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19057	hp1	a0001	c0001	t0036	g0004	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19057	hp2	a0001	c0001	t0007	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19058	hp1	a0001	c0001	t0007	g0042	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19060	hp1	a0001	c0001	t0012	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19062	hp1	a0001	c0001	t0008	g0032	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19063	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19066	hp1	a0001	c0002	t0005	g0005	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19067	hp1	a0001	c0001	t0022	g0004	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19068	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19070	hp1	a0001	c0001	t0012	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19072	hp1	a0001	c0001	t0003	g0004	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19074	hp1	a0001	c0001	t0001	g0012	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19074	hp2	a0001	c0001	t0002	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19075	hp1	a0001	c0001	t0003	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19076	hp1	a0001	c0001	t0052	g0046	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19077	hp1	a0001	c0002	t0010	g0016	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19077	hp2	a0001	c0001	t0020	g0004	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19079	hp1	a0001	c0001	t0001	g0012	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19082	hp1	a0001	c0001	t0029	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19083	hp1	a0001	c0002	t0005	g0002	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19085	hp1	a0001	c0001	t0058	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19086	hp1	a0001	c0001	t0008	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19087	hp1	a0001	c0001	t0002	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19087	hp2	a0001	c0002	t0025	g0005	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19088	hp1	a0001	c0001	t0036	g0004	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19091	hp1	a0001	c0004	t0008	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19240	hp1	a0001	c0001	t0015	g0003	AFR	YRI	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA19240	hp2	a0001	c0001	t0086	g0043	AFR	YRI	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA20129	hp1	a0001	c0001	t0011	g0003	AFR	ASW	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA20129	hp2	a0001	c0001	t0073	g0008	AFR	ASW	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA20752	hp1	a0001	c0001	t0008	g0001	EUR	TSI	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA20805	hp1	a0001	c0001	t0090	g0010	EUR	TSI	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA20905	hp1	a0001	c0001	t0009	g0001	SAS	GIH	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01123	hp1	a0001	c0001	t0007	g0001	AMR	CLM	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG01123	hp2	a0001	c0001	t0016	g0010	AMR	CLM	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02109	hp1	a0001	c0001	t0027	g0003	AFR	ACB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02109	hp2	a0001	c0001	t0007	g0001	AFR	ACB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02486	hp1	a0001	c0001	t0024	g0001	AFR	ACB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02559	hp1	a0001	c0002	t0010	g0002	AFR	ACB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG02559	hp2	a0001	c0001	t0004	g0001	AFR	ACB	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG03471	hp1	a0001	c0001	t0027	g0003	AFR	MSL	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG06807	hp1	a0001	c0001	t0032	g0008	AFR	USA	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
HG06807	hp2	a0001	c0001	t0011	g0003	AFR	USA	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA18955	hp1	a0001	c0001	t0003	g0001	EAS	JPT	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA20300	hp1	a0001	c0001	t0034	g0062	AFR	USA	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA20300	hp2	a0001	c0002	t0026	g0002	AFR	USA	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA21309	hp1	a0001	c0001	t0003	g0001	AFR	LWK	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
NA21309	hp2	a0001	c0001	t0016	g0010	AFR	LWK	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
homoSapiens_chm13v2	hp1	a0001	c0001	t0061	g0001	REF	REF	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390
homoSapiens_grch38	hp1	a0001	c0001	t0002	g0001	REF	REF	CD40LG_chrX_136643158_136665390	CD40LG	chrX	136643158	136665390

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	status	chr	pos
chrX:136654402	GA GA	G G	1	a0004 a0004	1	NA18988.hp1 NA18988.hp1	frameshift_variant	HIGH	c.321delA c.321delA	p.Glu108fs p.Glu108fs	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	3/5	412/1852	321/786	107/261	INFO_REALIGN_3_PRIME	chrX	136654402
chrX:136659171	G G	A A	1	a0002 a0002	2	HG02080.hp2 HG04228.hp1 HG02080.hp2 HG04228.hp1	missense_variant	MODERATE	c.542G>A c.542G>A	p.Arg181Gln p.Arg181Gln	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	633/1852	542/786	181/261		chrX	136659171
chrX:136659284	G G	A A	1	a0003 a0003	1	HG00140.hp1 HG00140.hp1	missense_variant	MODERATE	c.655G>A c.655G>A	p.Gly219Arg p.Gly219Arg	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	746/1852	655/786	219/261		chrX	136659284

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chrX:136648362	G G	A A	1	a0001c0006 a0001c0006	1	HG01891.hp1 HG01891.hp1	synonymous_variant	LOW	c.114G>A c.114G>A	p.Gly38Gly p.Gly38Gly	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	1/5	205/1852	114/786	38/261	chrX	136648362
chrX:136648396	T T	C C	2	a0001c0002 a0002c0003 a0001c0002 a0002c0003	65	HG00423.hp2 HG00438.hp1 HG00733.hp2 others(62): Show HG00423.hp2 HG00438.hp1 HG00733.hp2 HG00735.hp2 HG00741.hp1 HG01069.hp1 HG01071.hp1 HG01081.hp1 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp1 HG01255.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01346.hp1 HG01433.hp1 HG01891.hp2 HG01928.hp1 HG01943.hp1 HG01952.hp1 HG01981.hp1 HG01993.hp1 HG02004.hp2 HG02080.hp2 HG02145.hp1 HG02300.hp1 HG02559.hp1 HG02602.hp1 HG02615.hp1 HG02896.hp1 HG02970.hp1 HG02976.hp1 HG03209.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp2 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp2 HG04115.hp1 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18940.hp1 NA18942.hp1 NA18944.hp1 NA18949.hp1 NA18950.hp1 NA18954.hp1 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18977.hp1 NA19066.hp1 NA19077.hp1 NA19083.hp1 NA19087.hp2 NA20300.hp2	synonymous_variant	LOW	c.148T>C c.148T>C	p.Leu50Leu p.Leu50Leu	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	1/5	239/1852	148/786	50/261	chrX	136648396
chrX:136659313	A A	G G	1	a0001c0005 a0001c0005	2	HG03540.hp2 NA19043.hp1 HG03540.hp2 NA19043.hp1	synonymous_variant	LOW	c.684A>G c.684A>G	p.Val228Val p.Val228Val	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	775/1852	684/786	228/261	chrX	136659313
chrX:136659337	G G	A A	1	a0001c0004 a0001c0004	2	HG00673.hp1 NA19091.hp1 HG00673.hp1 NA19091.hp1	synonymous_variant	LOW	c.708G>A c.708G>A	p.Ser236Ser p.Ser236Ser	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	799/1852	708/786	236/261	chrX	136659337

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chrX:136659457	G G	GT GT	1	a0001c0001t0092 a0001c0001t0092	1	HG00323.hp1 HG00323.hp1	3_prime_UTR_variant	MODIFIER	c.43dupT c.43dupT	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	44	INFO_REALIGN_3_PRIME	chrX	136659457
chrX:136659538	CTATT CTATT	C C	1	a0001c0001t0043 a0001c0001t0043	1	NA19055.hp1 NA19055.hp1	3_prime_UTR_variant	MODIFIER	c.128_131delTATT c.128_131delTATT	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	128	INFO_REALIGN_3_PRIME	chrX	136659538
chrX:136659897	G G	A A	1	a0001c0001t0044 a0001c0001t0044	1	HG03041.hp2 HG03041.hp2	3_prime_UTR_variant	MODIFIER	c.482G>A c.482G>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	482		chrX	136659897
chrX:136659920	A A	AC AC	10	a0001c0001t0001 a0001c0001t0008 a0001c0001t0014 others(7): Show a0001c0001t0001 a0001c0001t0008 a0001c0001t0014 a0001c0001t0018 a0001c0001t0056 a0001c0001t0058 a0001c0002t0001 a0001c0002t0057 a0001c0004t0008 a0004c0008t0018	53	HG00099.hp1 HG00438.hp2 HG00642.hp1 others(50): Show HG00099.hp1 HG00438.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp1 HG00738.hp1 HG00741.hp2 HG01071.hp2 HG01099.hp1 HG01106.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01256.hp1 HG01346.hp2 HG01496.hp2 HG01515.hp1 HG01516.hp2 HG01517.hp2 HG02015.hp1 HG02074.hp1 HG02129.hp1 HG02132.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02738.hp1 HG03239.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03688.hp1 HG03704.hp2 HG04115.hp1 NA18950.hp2 NA18962.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp2 NA18977.hp1 NA18984.hp1 NA18986.hp1 NA18988.hp1 NA19006.hp1 NA19009.hp1 NA19062.hp1 NA19074.hp1 NA19079.hp1 NA19085.hp1 NA19086.hp1 NA19091.hp1 NA20752.hp1	3_prime_UTR_variant	MODIFIER	c.521dupC c.521dupC	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	522	INFO_REALIGN_3_PRIME	chrX	136659920
chrX:136659920	A A	ACC ACC	5	a0001c0001t0004 a0001c0001t0029 a0001c0001t0054 others(2): Show a0001c0001t0004 a0001c0001t0029 a0001c0001t0054 a0001c0001t0055 a0001c0002t0004	17	HG01168.hp2 HG01517.hp1 HG02080.hp1 others(14): Show HG01168.hp2 HG01517.hp1 HG02080.hp1 HG02135.hp1 HG02559.hp2 HG02735.hp1 HG03710.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 NA18612.hp1 NA18943.hp1 NA18947.hp2 NA18989.hp1 NA19000.hp1 NA19005.hp1 NA19082.hp1	3_prime_UTR_variant	MODIFIER	c.520_521dupCC c.520_521dupCC	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	522	INFO_REALIGN_3_PRIME	chrX	136659920
chrX:136659920	A A	ACCC ACCC	2	a0001c0001t0028 a0001c0001t0053 a0001c0001t0028 a0001c0001t0053	3	HG02071.hp1 HG02083.hp1 NA18990.hp1 HG02071.hp1 HG02083.hp1 NA18990.hp1	3_prime_UTR_variant	MODIFIER	c.519_521dupCCC c.519_521dupCCC	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	522	INFO_REALIGN_3_PRIME	chrX	136659920
chrX:136659920	A A	ACCCCC ACCCCC	1	a0001c0001t0052 a0001c0001t0052	1	NA19076.hp1 NA19076.hp1	3_prime_UTR_variant	MODIFIER	c.517_521dupCCCCC c.517_521dupCCCCC	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	522	INFO_REALIGN_3_PRIME	chrX	136659920
chrX:136659920	AC AC	A A	18	a0001c0001t0003 a0001c0001t0009 a0001c0001t0015 others(15): Show a0001c0001t0003 a0001c0001t0009 a0001c0001t0015 a0001c0001t0019 a0001c0001t0020 a0001c0001t0027 a0001c0001t0031 a0001c0001t0043 a0001c0001t0045 a0001c0001t0084 a0001c0001t0085 a0001c0001t0092 a0001c0002t0003 a0001c0002t0009 a0001c0002t0021 a0001c0002t0063 a0001c0005t0064 a0003c0007t0019	49	HG00140.hp1 HG00323.hp1 HG00408.hp1 others(46): Show HG00140.hp1 HG00323.hp1 HG00408.hp1 HG00408.hp2 HG00621.hp1 HG00735.hp1 HG01192.hp1 HG01358.hp1 HG01433.hp1 HG01884.hp1 HG01993.hp1 HG01993.hp2 HG02040.hp1 HG02056.hp1 HG02109.hp1 HG02280.hp2 HG02647.hp1 HG02809.hp1 HG02897.hp2 HG03139.hp1 HG03239.hp1 HG03471.hp1 HG03540.hp1 HG03831.hp2 HG03942.hp1 HG04184.hp2 HG04199.hp1 NA18946.hp2 NA18947.hp1 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18952.hp1 NA18955.hp1 NA18959.hp1 NA18974.hp1 NA18975.hp1 NA18980.hp2 NA18994.hp1 NA19004.hp1 NA19030.hp2 NA19043.hp1 NA19055.hp1 NA19072.hp1 NA19075.hp1 NA19077.hp2 NA19240.hp1 NA20905.hp1 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.521delC c.521delC	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	521	INFO_REALIGN_3_PRIME	chrX	136659920
chrX:136659920	ACC ACC	A A	33	a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 others(30): Show a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0011 a0001c0001t0013 a0001c0001t0016 a0001c0001t0022 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034 a0001c0001t0042 a0001c0001t0065 a0001c0001t0066 a0001c0001t0067 a0001c0001t0070 a0001c0001t0079 a0001c0001t0086 a0001c0001t0087 a0001c0001t0088 a0001c0001t0089 a0001c0001t0091 a0001c0002t0005 a0001c0002t0006 a0001c0002t0007 a0001c0002t0013 a0001c0002t0022 a0001c0002t0023 a0001c0002t0050 a0001c0002t0069 a0001c0005t0068 a0001c0006t0013 a0002c0003t0080 a0002c0003t0081	78	HG00323.hp2 HG00609.hp1 HG00639.hp1 others(75): Show HG00323.hp2 HG00609.hp1 HG00639.hp1 HG00639.hp2 HG00741.hp1 HG01069.hp1 HG01071.hp1 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01123.hp1 HG01123.hp2 HG01243.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01891.hp1 HG01934.hp1 HG01943.hp1 HG01981.hp1 HG02080.hp2 HG02109.hp2 HG02145.hp1 HG02257.hp1 HG02257.hp2 HG02451.hp1 HG02523.hp1 HG02602.hp1 HG02615.hp2 HG02630.hp1 HG02698.hp1 HG02809.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG02965.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03704.hp1 HG03831.hp1 HG03834.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp2 NA18940.hp1 NA18942.hp2 NA18944.hp1 NA18954.hp1 NA18961.hp1 NA18963.hp1 NA18963.hp2 NA18968.hp1 NA18971.hp1 NA18975.hp2 NA19030.hp1 NA19057.hp2 NA19058.hp1 NA19066.hp1 NA19067.hp1 NA19083.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.520_521delCC c.520_521delCC	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	520	INFO_REALIGN_3_PRIME	chrX	136659920
chrX:136659920	ACCC ACCC	A A	20	a0001c0001t0010 a0001c0001t0017 a0001c0001t0024 others(17): Show a0001c0001t0010 a0001c0001t0017 a0001c0001t0024 a0001c0001t0035 a0001c0001t0036 a0001c0001t0037 a0001c0001t0071 a0001c0001t0072 a0001c0001t0073 a0001c0001t0076 a0001c0001t0090 a0001c0002t0010 a0001c0002t0017 a0001c0002t0025 a0001c0002t0040 a0001c0002t0041 a0001c0002t0049 a0001c0002t0074 a0001c0002t0075 a0001c0002t0078	37	HG00423.hp2 HG00438.hp1 HG01109.hp1 others(34): Show HG00423.hp2 HG00438.hp1 HG01109.hp1 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01255.hp1 HG01884.hp2 HG01891.hp2 HG01952.hp1 HG02258.hp1 HG02280.hp1 HG02300.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02615.hp1 HG02818.hp2 HG02896.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03209.hp1 HG03490.hp1 HG03516.hp2 NA18942.hp1 NA18950.hp1 NA18960.hp1 NA18982.hp1 NA19057.hp1 NA19077.hp1 NA19087.hp2 NA19088.hp1 NA20129.hp2 NA20805.hp1	3_prime_UTR_variant	MODIFIER	c.519_521delCCC c.519_521delCCC	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	519	INFO_REALIGN_3_PRIME	chrX	136659920
chrX:136659920	ACCCC ACCCC	A A	7	a0001c0001t0026 a0001c0001t0038 a0001c0001t0039 others(4): Show a0001c0001t0026 a0001c0001t0038 a0001c0001t0039 a0001c0001t0046 a0001c0001t0047 a0001c0001t0077 a0001c0002t0026	10	HG00735.hp2 HG01496.hp1 HG02004.hp1 others(7): Show HG00735.hp2 HG01496.hp1 HG02004.hp1 HG02630.hp2 HG02717.hp1 HG02818.hp1 HG02886.hp2 HG03130.hp1 NA18906.hp1 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.518_521delCCCC c.518_521delCCCC	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	518	INFO_REALIGN_3_PRIME	chrX	136659920
chrX:136659923	C C	G G	1	a0001c0001t0083 a0001c0001t0083	1	HG02055.hp1 HG02055.hp1	3_prime_UTR_variant	MODIFIER	c.508C>G c.508C>G	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	508		chrX	136659923
chrX:136659924	C C	A A	1	a0001c0001t0045 a0001c0001t0045	1	HG01358.hp1 HG01358.hp1	3_prime_UTR_variant	MODIFIER	c.509C>A c.509C>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	509		chrX	136659924
chrX:136659924	C C	CA CA	1	a0001c0002t0048 a0001c0002t0048	1	HG04204.hp1 HG04204.hp1	3_prime_UTR_variant	MODIFIER	c.509_510insA c.509_510insA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	510		chrX	136659924
chrX:136659924	C C	G G	4	a0001c0001t0015 a0001c0001t0027 a0001c0001t0084 others(1): Show a0001c0001t0015 a0001c0001t0027 a0001c0001t0084 a0001c0001t0085	10	HG01884.hp1 HG02109.hp1 HG02647.hp1 others(7): Show HG01884.hp1 HG02109.hp1 HG02647.hp1 HG02809.hp1 HG02897.hp2 HG03139.hp1 HG03471.hp1 HG03540.hp1 NA19030.hp2 NA19240.hp1	3_prime_UTR_variant	MODIFIER	c.509C>G c.509C>G	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	509		chrX	136659924
chrX:136659925	C C	G G	7	a0001c0001t0011 a0001c0001t0016 a0001c0001t0086 others(4): Show a0001c0001t0011 a0001c0001t0016 a0001c0001t0086 a0001c0001t0087 a0001c0001t0088 a0001c0001t0089 a0001c0001t0091	17	HG01123.hp2 HG02257.hp1 HG02630.hp1 others(14): Show HG01123.hp2 HG02257.hp1 HG02630.hp1 HG02886.hp1 HG02895.hp1 HG02976.hp2 HG03098.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp1 HG03516.hp1 HG06807.hp2 NA18906.hp2 NA18971.hp1 NA19240.hp2 NA20129.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.510C>G c.510C>G	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	510		chrX	136659925
chrX:136659925	C C	T T	1	a0001c0001t0082 a0001c0001t0082	1	NA18980.hp1 NA18980.hp1	3_prime_UTR_variant	MODIFIER	c.510C>T c.510C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	510		chrX	136659925
chrX:136659926	C C	G G	1	a0001c0001t0090 a0001c0001t0090	1	NA20805.hp1 NA20805.hp1	3_prime_UTR_variant	MODIFIER	c.511C>G c.511C>G	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	511		chrX	136659926
chrX:136659927	C C	A A	2	a0001c0001t0046 a0001c0001t0047 a0001c0001t0046 a0001c0001t0047	2	HG01496.hp1 NA18906.hp1 HG01496.hp1 NA18906.hp1	3_prime_UTR_variant	MODIFIER	c.512C>A c.512C>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	512		chrX	136659927
chrX:136659929	C C	A A	1	a0001c0002t0049 a0001c0002t0049	1	HG00423.hp2 HG00423.hp2	3_prime_UTR_variant	MODIFIER	c.514C>A c.514C>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	514		chrX	136659929
chrX:136659930	C C	T T	3	a0001c0001t0042 a0002c0003t0080 a0002c0003t0081 a0001c0001t0042 a0002c0003t0080 a0002c0003t0081	4	HG02080.hp2 HG04228.hp1 NA18522.hp1 others(1): Show HG02080.hp2 HG04228.hp1 NA18522.hp1 NA19030.hp1	3_prime_UTR_variant	MODIFIER	c.515C>T c.515C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	515		chrX	136659930
chrX:136659931	C C	A A	1	a0001c0002t0050 a0001c0002t0050	1	HG02896.hp1 HG02896.hp1	3_prime_UTR_variant	MODIFIER	c.516C>A c.516C>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	516		chrX	136659931
chrX:136659931	C C	G G	2	a0001c0001t0091 a0001c0002t0041 a0001c0001t0091 a0001c0002t0041	3	HG01167.hp1 HG01169.hp1 HG03098.hp1 HG01167.hp1 HG01169.hp1 HG03098.hp1	3_prime_UTR_variant	MODIFIER	c.516C>G c.516C>G	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	516		chrX	136659931
chrX:136659931	C C	T T	1	a0001c0001t0043 a0001c0001t0043	1	NA19055.hp1 NA19055.hp1	3_prime_UTR_variant	MODIFIER	c.516C>T c.516C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	516		chrX	136659931
chrX:136659932	C C	G G	1	a0001c0002t0040 a0001c0002t0040	2	HG01891.hp2 HG03516.hp2 HG01891.hp2 HG03516.hp2	3_prime_UTR_variant	MODIFIER	c.517C>G c.517C>G	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	517		chrX	136659932
chrX:136659932	C C	T T	2	a0001c0001t0044 a0001c0001t0079 a0001c0001t0044 a0001c0001t0079	2	HG02451.hp1 HG03041.hp2 HG02451.hp1 HG03041.hp2	3_prime_UTR_variant	MODIFIER	c.517C>T c.517C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	517		chrX	136659932
chrX:136659934	C C	A A	1	a0001c0001t0051 a0001c0001t0051	1	HG04184.hp1 HG04184.hp1	3_prime_UTR_variant	MODIFIER	c.519C>A c.519C>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	519		chrX	136659934
chrX:136659934	C C	G G	1	a0001c0002t0078 a0001c0002t0078	1	HG02615.hp1 HG02615.hp1	3_prime_UTR_variant	MODIFIER	c.519C>G c.519C>G	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	519		chrX	136659934
chrX:136659948	G G	A A	13	a0001c0001t0011 a0001c0001t0015 a0001c0001t0016 others(10): Show a0001c0001t0011 a0001c0001t0015 a0001c0001t0016 a0001c0001t0027 a0001c0001t0083 a0001c0001t0084 a0001c0001t0085 a0001c0001t0086 a0001c0001t0087 a0001c0001t0088 a0001c0001t0089 a0001c0001t0090 a0001c0001t0091	29	HG01123.hp2 HG01884.hp1 HG02055.hp1 others(26): Show HG01123.hp2 HG01884.hp1 HG02055.hp1 HG02109.hp1 HG02257.hp1 HG02630.hp1 HG02647.hp1 HG02809.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02976.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03516.hp1 HG03540.hp1 HG06807.hp2 NA18906.hp2 NA18971.hp1 NA19030.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20805.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.533G>A c.533G>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	533		chrX	136659948
chrX:136659985	ATC ATC	A A	1	a0001c0001t0076 a0001c0001t0076	1	HG02258.hp1 HG02258.hp1	3_prime_UTR_variant	MODIFIER	c.578_579delCT c.578_579delCT	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	578	INFO_REALIGN_3_PRIME	chrX	136659985
chrX:136660078	C C	T T	12	a0001c0001t0011 a0001c0001t0015 a0001c0001t0016 others(9): Show a0001c0001t0011 a0001c0001t0015 a0001c0001t0016 a0001c0001t0027 a0001c0001t0083 a0001c0001t0084 a0001c0001t0085 a0001c0001t0087 a0001c0001t0088 a0001c0001t0089 a0001c0001t0090 a0001c0001t0091	28	HG01123.hp2 HG01884.hp1 HG02055.hp1 others(25): Show HG01123.hp2 HG01884.hp1 HG02055.hp1 HG02109.hp1 HG02257.hp1 HG02630.hp1 HG02647.hp1 HG02809.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02976.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03516.hp1 HG03540.hp1 HG06807.hp2 NA18906.hp2 NA18971.hp1 NA19030.hp2 NA19240.hp1 NA20129.hp1 NA20805.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.663C>T c.663C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	663		chrX	136660078
chrX:136660099	C C	T T	1	a0001c0001t0070 a0001c0001t0070	1	HG03704.hp1 HG03704.hp1	3_prime_UTR_variant	MODIFIER	c.684C>T c.684C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	684		chrX	136660099
chrX:136660104	T T	TAACACAC others(7): Show TAACACACACACATA	1	a0001c0001t0087 a0001c0001t0087	1	NA18971.hp1 NA18971.hp1	3_prime_UTR_variant	MODIFIER	c.701_702insTAAACA others(8): Show c.701_702insTAAACACACACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	702	INFO_REALIGN_3_PRIME	chrX	136660104
chrX:136660105	A A	AAC AAC	11	a0001c0001t0006 a0001c0001t0009 a0001c0001t0012 others(8): Show a0001c0001t0006 a0001c0001t0009 a0001c0001t0012 a0001c0001t0014 a0001c0001t0036 a0001c0001t0053 a0001c0001t0055 a0001c0002t0006 a0001c0002t0009 a0001c0002t0048 a0001c0002t0078	36	HG00099.hp2 HG00408.hp1 HG00423.hp1 others(33): Show HG00099.hp2 HG00408.hp1 HG00423.hp1 HG00609.hp1 HG00621.hp1 HG00738.hp1 HG01069.hp1 HG01071.hp1 HG01192.hp1 HG01517.hp2 HG01934.hp1 HG01943.hp1 HG01993.hp1 HG01993.hp2 HG02027.hp1 HG02083.hp1 HG02129.hp1 HG02165.hp1 HG02523.hp1 HG02615.hp1 HG02738.hp1 HG02965.hp1 HG03486.hp1 HG03927.hp2 HG04204.hp1 NA18942.hp2 NA18946.hp2 NA18947.hp1 NA18953.hp1 NA18975.hp2 NA19004.hp1 NA19057.hp1 NA19060.hp1 NA19070.hp1 NA19088.hp1 NA20905.hp1	3_prime_UTR_variant	MODIFIER	c.742_743dupCA c.742_743dupCA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	744	INFO_REALIGN_3_PRIME	chrX	136660105
chrX:136660105	A A	AACAC AACAC	10	a0001c0001t0018 a0001c0001t0019 a0001c0001t0022 others(7): Show a0001c0001t0018 a0001c0001t0019 a0001c0001t0022 a0001c0001t0028 a0001c0001t0035 a0001c0001t0059 a0001c0001t0076 a0001c0002t0022 a0003c0007t0019 a0004c0008t0018	15	HG00099.hp1 HG00140.hp1 HG00438.hp2 others(12): Show HG00099.hp1 HG00140.hp1 HG00438.hp2 HG01261.hp1 HG01981.hp2 HG02071.hp1 HG02258.hp1 HG02280.hp2 HG02451.hp2 HG02970.hp2 HG03834.hp1 HG04184.hp2 NA18988.hp1 NA18990.hp1 NA19067.hp1	3_prime_UTR_variant	MODIFIER	c.740_743dupCACA c.740_743dupCACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	744	INFO_REALIGN_3_PRIME	chrX	136660105
chrX:136660105	A A	AACACAC AACACAC	7	a0001c0001t0013 a0001c0001t0031 a0001c0001t0054 others(4): Show a0001c0001t0013 a0001c0001t0031 a0001c0001t0054 a0001c0001t0056 a0001c0001t0073 a0001c0002t0013 a0001c0006t0013	11	HG00323.hp2 HG01081.hp1 HG01081.hp2 others(8): Show HG00323.hp2 HG01081.hp1 HG01081.hp2 HG01496.hp2 HG01891.hp1 HG02257.hp2 HG03239.hp1 HG03654.hp1 HG03927.hp1 HG03942.hp1 NA20129.hp2	3_prime_UTR_variant	MODIFIER	c.738_743dupCACACA c.738_743dupCACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	744	INFO_REALIGN_3_PRIME	chrX	136660105
chrX:136660105	A A	AACACACA others(1): Show AACACACAC	2	a0001c0001t0067 a0001c0001t0072 a0001c0001t0067 a0001c0001t0072	2	HG02809.hp2 HG02896.hp2 HG02809.hp2 HG02896.hp2	3_prime_UTR_variant	MODIFIER	c.736_743dupCACACA others(2): Show c.736_743dupCACACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	744	INFO_REALIGN_3_PRIME	chrX	136660105
chrX:136660105	A A	AACACACA others(3): Show AACACACACAC	1	a0001c0001t0032 a0001c0001t0032	2	HG02897.hp1 HG06807.hp1 HG02897.hp1 HG06807.hp1	3_prime_UTR_variant	MODIFIER	c.734_743dupCACACA others(4): Show c.734_743dupCACACACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	744	INFO_REALIGN_3_PRIME	chrX	136660105
chrX:136660105	A A	AACACACA others(5): Show AACACACACACAC	1	a0001c0001t0066 a0001c0001t0066	1	NA18963.hp2 NA18963.hp2	3_prime_UTR_variant	MODIFIER	c.732_743dupCACACA others(6): Show c.732_743dupCACACACACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	744	INFO_REALIGN_3_PRIME	chrX	136660105
chrX:136660105	A A	AACACACA others(7): Show AACACACACACACAC	2	a0001c0001t0065 a0001c0001t0071 a0001c0001t0065 a0001c0001t0071	2	HG01109.hp1 NA18963.hp1 HG01109.hp1 NA18963.hp1	3_prime_UTR_variant	MODIFIER	c.730_743dupCACACA others(8): Show c.730_743dupCACACACACACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	744	INFO_REALIGN_3_PRIME	chrX	136660105
chrX:136660105	AAC AAC	A A	10	a0001c0001t0008 a0001c0001t0017 a0001c0001t0020 others(7): Show a0001c0001t0008 a0001c0001t0017 a0001c0001t0020 a0001c0001t0029 a0001c0001t0033 a0001c0001t0046 a0001c0001t0051 a0001c0001t0060 a0001c0002t0017 a0001c0004t0008	23	HG00639.hp1 HG00639.hp2 HG00673.hp1 others(20): Show HG00639.hp1 HG00639.hp2 HG00673.hp1 HG00735.hp1 HG01168.hp2 HG01169.hp2 HG01255.hp1 HG01496.hp1 HG02040.hp1 HG02572.hp1 HG02970.hp1 HG02976.hp1 HG03453.hp2 HG03491.hp1 HG03688.hp1 HG04184.hp1 NA18950.hp2 NA19062.hp1 NA19077.hp2 NA19082.hp1 NA19086.hp1 NA19091.hp1 NA20752.hp1	3_prime_UTR_variant	MODIFIER	c.742_743delCA c.742_743delCA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	742	INFO_REALIGN_3_PRIME	chrX	136660105
chrX:136660105	AACAC AACAC	A A	9	a0001c0001t0026 a0001c0001t0047 a0001c0002t0023 others(6): Show a0001c0001t0026 a0001c0001t0047 a0001c0002t0023 a0001c0002t0025 a0001c0002t0026 a0001c0002t0040 a0001c0002t0057 a0001c0002t0063 a0002c0003t0080	15	HG00735.hp2 HG01168.hp1 HG01257.hp2 others(12): Show HG00735.hp2 HG01168.hp1 HG01257.hp2 HG01258.hp1 HG01891.hp2 HG02004.hp1 HG02602.hp1 HG03516.hp2 HG03831.hp2 HG04115.hp1 HG04228.hp1 NA18906.hp1 NA18950.hp1 NA19087.hp2 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.740_743delCACA c.740_743delCACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	740	INFO_REALIGN_3_PRIME	chrX	136660105
chrX:136660105	AACACAC AACACAC	A A	10	a0001c0001t0005 a0001c0001t0010 a0001c0001t0030 others(7): Show a0001c0001t0005 a0001c0001t0010 a0001c0001t0030 a0001c0002t0005 a0001c0002t0010 a0001c0002t0021 a0001c0002t0041 a0001c0002t0049 a0001c0002t0050 a0002c0003t0081	29	HG00423.hp2 HG00438.hp1 HG00741.hp1 others(26): Show HG00423.hp2 HG00438.hp1 HG00741.hp1 HG01167.hp1 HG01169.hp1 HG01952.hp1 HG01981.hp1 HG02080.hp2 HG02145.hp1 HG02300.hp1 HG02523.hp2 HG02559.hp1 HG02896.hp1 HG03041.hp1 HG03831.hp1 HG04199.hp1 NA18940.hp1 NA18942.hp1 NA18944.hp1 NA18949.hp1 NA18951.hp1 NA18951.hp2 NA18954.hp1 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA19066.hp1 NA19077.hp1 NA19083.hp1	3_prime_UTR_variant	MODIFIER	c.738_743delCACACA c.738_743delCACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	738	INFO_REALIGN_3_PRIME	chrX	136660105
chrX:136660105	AACACACA others(1): Show AACACACAC	A A	3	a0001c0001t0042 a0001c0001t0058 a0001c0002t0074 a0001c0001t0042 a0001c0001t0058 a0001c0002t0074	4	HG03209.hp1 NA18522.hp1 NA19030.hp1 others(1): Show HG03209.hp1 NA18522.hp1 NA19030.hp1 NA19085.hp1	3_prime_UTR_variant	MODIFIER	c.736_743delCACACA others(2): Show c.736_743delCACACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	736	INFO_REALIGN_3_PRIME	chrX	136660105
chrX:136660105	AACACACA others(5): Show AACACACACACAC	A A	2	a0001c0005t0064 a0001c0005t0068 a0001c0005t0064 a0001c0005t0068	2	HG03540.hp2 NA19043.hp1 HG03540.hp2 NA19043.hp1	3_prime_UTR_variant	MODIFIER	c.732_743delCACACA others(6): Show c.732_743delCACACACACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	732	INFO_REALIGN_3_PRIME	chrX	136660105
chrX:136660105	AACACACA others(9): Show AACACACACACACACAC	A A	1	a0001c0001t0061 a0001c0001t0061	1	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.728_743delCACACA others(10): Show c.728_743delCACACACACACACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	728	INFO_REALIGN_3_PRIME	chrX	136660105
chrX:136660105	AACACACA others(13): Show AACACACACACACACACACAC	A A	2	a0001c0001t0062 a0001c0002t0075 a0001c0001t0062 a0001c0002t0075	2	HG03490.hp1 NA18965.hp1 HG03490.hp1 NA18965.hp1	3_prime_UTR_variant	MODIFIER	c.724_743delCACACA others(14): Show c.724_743delCACACACACACACACACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	724	INFO_REALIGN_3_PRIME	chrX	136660105
chrX:136660105	AACACACA others(15): Show AACACACACACACACACACACAC	A A	3	a0001c0001t0034 a0001c0001t0037 a0001c0001t0038 a0001c0001t0034 a0001c0001t0037 a0001c0001t0038	6	HG02280.hp1 HG02615.hp2 HG02630.hp2 others(3): Show HG02280.hp1 HG02615.hp2 HG02630.hp2 HG02818.hp2 HG03130.hp1 NA20300.hp1	3_prime_UTR_variant	MODIFIER	c.722_743delCACACA others(16): Show c.722_743delCACACACACACACACACACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	722	INFO_REALIGN_3_PRIME	chrX	136660105
chrX:136660105	AACACACA others(17): Show AACACACACACACACACACACACAC	A A	2	a0001c0001t0039 a0001c0002t0069 a0001c0001t0039 a0001c0002t0069	3	HG01243.hp1 HG02818.hp1 HG02886.hp2 HG01243.hp1 HG02818.hp1 HG02886.hp2	3_prime_UTR_variant	MODIFIER	c.720_743delCACACA others(18): Show c.720_743delCACACACACACACACACACACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	720	INFO_REALIGN_3_PRIME	chrX	136660105
chrX:136660107	C C	CACACACA others(5): Show CACACACACATAA	3	a0001c0001t0079 a0001c0001t0084 a0001c0001t0088 a0001c0001t0079 a0001c0001t0084 a0001c0001t0088	3	HG02451.hp1 HG02895.hp1 HG02897.hp2 HG02451.hp1 HG02895.hp1 HG02897.hp2	3_prime_UTR_variant	MODIFIER	c.701_702insTAAACA others(6): Show c.701_702insTAAACACACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	702	INFO_REALIGN_3_PRIME	chrX	136660107
chrX:136660109	C C	CACACACA others(2): Show CACACACATA	1	a0001c0001t0089 a0001c0001t0089	1	HG03453.hp1 HG03453.hp1	3_prime_UTR_variant	MODIFIER	c.701_702insTAACAC others(3): Show c.701_702insTAACACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	702	INFO_REALIGN_3_PRIME	chrX	136660109
chrX:136660109	C C	CACACACA others(3): Show CACACACATAA	2	a0001c0001t0011 a0001c0001t0015 a0001c0001t0011 a0001c0001t0015	12	HG02257.hp1 HG02630.hp1 HG02647.hp1 others(9): Show HG02257.hp1 HG02630.hp1 HG02647.hp1 HG02809.hp1 HG02886.hp1 HG02976.hp2 HG03516.hp1 HG03540.hp1 HG06807.hp2 NA19030.hp2 NA19240.hp1 NA20129.hp1	3_prime_UTR_variant	MODIFIER	c.701_702insTAAACA others(4): Show c.701_702insTAAACACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	702	INFO_REALIGN_3_PRIME	chrX	136660109
chrX:136660111	C C	CACACATA others(1): Show CACACATAA	3	a0001c0001t0016 a0001c0001t0027 a0001c0001t0090 a0001c0001t0016 a0001c0001t0027 a0001c0001t0090	9	HG01123.hp2 HG01884.hp1 HG02109.hp1 others(6): Show HG01123.hp2 HG01884.hp1 HG02109.hp1 HG03195.hp2 HG03225.hp1 HG03471.hp1 NA18906.hp2 NA20805.hp1 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.701_702insTAAACA others(2): Show c.701_702insTAAACACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	702	INFO_REALIGN_3_PRIME	chrX	136660111
chrX:136660113	C C	CACATAA CACATAA	2	a0001c0001t0083 a0001c0001t0085 a0001c0001t0083 a0001c0001t0085	2	HG02055.hp1 HG03139.hp1 HG02055.hp1 HG03139.hp1	3_prime_UTR_variant	MODIFIER	c.701_702insTAAACA c.701_702insTAAACA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	702	INFO_REALIGN_3_PRIME	chrX	136660113
chrX:136660115	C C	CATAA CATAA	2	a0001c0001t0086 a0001c0001t0091 a0001c0001t0086 a0001c0001t0091	2	HG03098.hp1 NA19240.hp2 HG03098.hp1 NA19240.hp2	3_prime_UTR_variant	MODIFIER	c.701_702insTAAA c.701_702insTAAA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	5/5	702	INFO_REALIGN_3_PRIME	chrX	136660115

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chrX:136648701	T T	C C	1	a0001c0001t0038g0023 a0001c0001t0038g0023	1	HG03130.hp1 HG03130.hp1	intron_variant	MODIFIER	c.156+297T>C c.156+297T>C	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	1/4		chrX	136648701
chrX:136648761	C C	T T	1	a0001c0001t0034g0062 a0001c0001t0034g0062	1	NA20300.hp1 NA20300.hp1	intron_variant	MODIFIER	c.156+357C>T c.156+357C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	1/4		chrX	136648761
chrX:136648826	G G	A A	3	a0001c0002t0001g0011 a0001c0002t0004g0011 a0001c0002t0004g0024 a0001c0002t0001g0011 a0001c0002t0004g0011 a0001c0002t0004g0024	4	HG03491.hp2 HG03492.hp1 HG03710.hp1 others(1): Show HG03491.hp2 HG03492.hp1 HG03710.hp1 HG03834.hp2	intron_variant	MODIFIER	c.156+422G>A c.156+422G>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	1/4		chrX	136648826
chrX:136649129	T T	C C	2	a0001c0001t0001g0012 a0001c0001t0066g0012 a0001c0001t0001g0012 a0001c0001t0066g0012	3	NA18963.hp2 NA19074.hp1 NA19079.hp1 NA18963.hp2 NA19074.hp1 NA19079.hp1	intron_variant	MODIFIER	c.156+725T>C c.156+725T>C	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	1/4		chrX	136649129
chrX:136649245	G G	A A	1	a0001c0002t0057g0025 a0001c0002t0057g0025	1	HG04115.hp1 HG04115.hp1	intron_variant	MODIFIER	c.156+841G>A c.156+841G>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	1/4		chrX	136649245
chrX:136649429	AG AG	A A	1	a0001c0001t0003g0026 a0001c0001t0003g0026	1	NA18974.hp1 NA18974.hp1	intron_variant	MODIFIER	c.157-832delG c.157-832delG	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	1/4	INFO_REALIGN_3_PRIME	chrX	136649429
chrX:136649548	C C	T T	19	a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0011g0003 others(16): Show a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0011g0003 a0001c0001t0015g0003 a0001c0001t0015g0059 a0001c0001t0016g0003 a0001c0001t0016g0010 a0001c0001t0024g0060 a0001c0001t0027g0003 a0001c0001t0027g0010 a0001c0001t0038g0022 a0001c0001t0039g0022 a0001c0001t0083g0003 a0001c0001t0084g0003 a0001c0001t0085g0061 a0001c0001t0088g0003 a0001c0001t0089g0003 a0001c0001t0090g0010 a0001c0001t0091g0003	32	HG01123.hp2 HG01884.hp1 HG01884.hp2 others(29): Show HG01123.hp2 HG01884.hp1 HG01884.hp2 HG02055.hp1 HG02109.hp1 HG02257.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02809.hp1 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02965.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03516.hp1 HG03540.hp1 HG06807.hp2 NA18906.hp2 NA19030.hp2 NA19240.hp1 NA20129.hp1 NA20805.hp1 NA21309.hp2	intron_variant	MODIFIER	c.157-718C>T c.157-718C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	1/4		chrX	136649548
chrX:136649550	G G	A A	19	a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0011g0003 others(16): Show a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0011g0003 a0001c0001t0015g0003 a0001c0001t0015g0059 a0001c0001t0016g0003 a0001c0001t0016g0010 a0001c0001t0024g0060 a0001c0001t0027g0003 a0001c0001t0027g0010 a0001c0001t0038g0022 a0001c0001t0039g0022 a0001c0001t0083g0003 a0001c0001t0084g0003 a0001c0001t0085g0061 a0001c0001t0088g0003 a0001c0001t0089g0003 a0001c0001t0090g0010 a0001c0001t0091g0003	32	HG01123.hp2 HG01884.hp1 HG01884.hp2 others(29): Show HG01123.hp2 HG01884.hp1 HG01884.hp2 HG02055.hp1 HG02109.hp1 HG02257.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02809.hp1 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02965.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03516.hp1 HG03540.hp1 HG06807.hp2 NA18906.hp2 NA19030.hp2 NA19240.hp1 NA20129.hp1 NA20805.hp1 NA21309.hp2	intron_variant	MODIFIER	c.157-716G>A c.157-716G>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	1/4		chrX	136649550
chrX:136649794	G G	A A	1	a0001c0002t0005g0027 a0001c0002t0005g0027	1	HG03831.hp1 HG03831.hp1	intron_variant	MODIFIER	c.157-472G>A c.157-472G>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	1/4		chrX	136649794
chrX:136649989	G G	A A	3	a0001c0001t0001g0007 a0001c0001t0012g0007 a0001c0001t0014g0007 a0001c0001t0001g0007 a0001c0001t0012g0007 a0001c0001t0014g0007	5	HG00099.hp2 HG01099.hp1 HG01346.hp2 others(2): Show HG00099.hp2 HG01099.hp1 HG01346.hp2 HG01516.hp2 HG01517.hp2	intron_variant	MODIFIER	c.157-277G>A c.157-277G>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	1/4		chrX	136649989
chrX:136650477	T T	C C	11	a0001c0001t0013g0008 a0001c0001t0032g0008 a0001c0001t0032g0014 others(8): Show a0001c0001t0013g0008 a0001c0001t0032g0008 a0001c0001t0032g0014 a0001c0001t0035g0008 a0001c0001t0067g0008 a0001c0001t0071g0029 a0001c0001t0072g0014 a0001c0001t0073g0008 a0001c0001t0079g0028 a0001c0005t0064g0015 a0001c0005t0068g0015	11	HG01109.hp1 HG02257.hp2 HG02451.hp1 others(8): Show HG01109.hp1 HG02257.hp2 HG02451.hp1 HG02451.hp2 HG02809.hp2 HG02896.hp2 HG02897.hp1 HG03540.hp2 HG06807.hp1 NA19043.hp1 NA20129.hp2	intron_variant	MODIFIER	c.288+80T>C c.288+80T>C	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136650477
chrX:136650510	G G	GAC GAC	19	a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0011g0003 others(16): Show a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0011g0003 a0001c0001t0015g0003 a0001c0001t0015g0059 a0001c0001t0016g0003 a0001c0001t0016g0010 a0001c0001t0024g0060 a0001c0001t0027g0003 a0001c0001t0027g0010 a0001c0001t0038g0022 a0001c0001t0039g0022 a0001c0001t0083g0003 a0001c0001t0084g0003 a0001c0001t0085g0061 a0001c0001t0088g0003 a0001c0001t0089g0003 a0001c0001t0090g0010 a0001c0001t0091g0003	32	HG01123.hp2 HG01884.hp1 HG01884.hp2 others(29): Show HG01123.hp2 HG01884.hp1 HG01884.hp2 HG02055.hp1 HG02109.hp1 HG02257.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02809.hp1 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02965.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03516.hp1 HG03540.hp1 HG06807.hp2 NA18906.hp2 NA19030.hp2 NA19240.hp1 NA20129.hp1 NA20805.hp1 NA21309.hp2	intron_variant	MODIFIER	c.288+125_288+126dup others(2): Show c.288+125_288+126dupCA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	136650510
chrX:136650546	C C	T T	1	a0001c0002t0021g0058 a0001c0002t0021g0058	1	HG04199.hp1 HG04199.hp1	intron_variant	MODIFIER	c.288+149C>T c.288+149C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136650546
chrX:136650573	T T	TA TA	19	a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0011g0003 others(16): Show a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0011g0003 a0001c0001t0015g0003 a0001c0001t0015g0059 a0001c0001t0016g0003 a0001c0001t0016g0010 a0001c0001t0024g0060 a0001c0001t0027g0003 a0001c0001t0027g0010 a0001c0001t0038g0022 a0001c0001t0039g0022 a0001c0001t0083g0003 a0001c0001t0084g0003 a0001c0001t0085g0061 a0001c0001t0088g0003 a0001c0001t0089g0003 a0001c0001t0090g0010 a0001c0001t0091g0003	32	HG01123.hp2 HG01884.hp1 HG01884.hp2 others(29): Show HG01123.hp2 HG01884.hp1 HG01884.hp2 HG02055.hp1 HG02109.hp1 HG02257.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02809.hp1 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02965.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03516.hp1 HG03540.hp1 HG06807.hp2 NA18906.hp2 NA19030.hp2 NA19240.hp1 NA20129.hp1 NA20805.hp1 NA21309.hp2	intron_variant	MODIFIER	c.288+188dupA c.288+188dupA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	136650573
chrX:136650573	TA TA	T T	5	a0001c0001t0002g0057 a0001c0001t0006g0056 a0001c0001t0009g0009 others(2): Show a0001c0001t0002g0057 a0001c0001t0006g0056 a0001c0001t0009g0009 a0001c0001t0012g0009 a0001c0001t0071g0029	7	HG00408.hp1 HG00423.hp1 HG01109.hp1 others(4): Show HG00408.hp1 HG00423.hp1 HG01109.hp1 NA18942.hp2 NA18946.hp1 NA18946.hp2 NA19004.hp1	intron_variant	MODIFIER	c.288+188delA c.288+188delA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	136650573
chrX:136650740	G G	A A	1	a0001c0001t0015g0059 a0001c0001t0015g0059	1	NA19030.hp2 NA19030.hp2	intron_variant	MODIFIER	c.288+343G>A c.288+343G>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136650740
chrX:136650849	C C	T T	2	a0001c0001t0046g0020 a0001c0001t0047g0020 a0001c0001t0046g0020 a0001c0001t0047g0020	2	HG01496.hp1 NA18906.hp1 HG01496.hp1 NA18906.hp1	intron_variant	MODIFIER	c.288+452C>T c.288+452C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136650849
chrX:136650998	C C	T T	1	a0001c0001t0071g0029 a0001c0001t0071g0029	1	HG01109.hp1 HG01109.hp1	intron_variant	MODIFIER	c.288+601C>T c.288+601C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136650998
chrX:136651083	C C	T T	19	a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0011g0003 others(16): Show a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0011g0003 a0001c0001t0015g0003 a0001c0001t0015g0059 a0001c0001t0016g0003 a0001c0001t0016g0010 a0001c0001t0024g0060 a0001c0001t0027g0003 a0001c0001t0027g0010 a0001c0001t0038g0022 a0001c0001t0039g0022 a0001c0001t0083g0003 a0001c0001t0084g0003 a0001c0001t0085g0061 a0001c0001t0088g0003 a0001c0001t0089g0003 a0001c0001t0090g0010 a0001c0001t0091g0003	32	HG01123.hp2 HG01884.hp1 HG01884.hp2 others(29): Show HG01123.hp2 HG01884.hp1 HG01884.hp2 HG02055.hp1 HG02109.hp1 HG02257.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02809.hp1 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02965.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03516.hp1 HG03540.hp1 HG06807.hp2 NA18906.hp2 NA19030.hp2 NA19240.hp1 NA20129.hp1 NA20805.hp1 NA21309.hp2	intron_variant	MODIFIER	c.288+686C>T c.288+686C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136651083
chrX:136651147	C C	T T	1	a0001c0001t0008g0055 a0001c0001t0008g0055	1	HG03688.hp1 HG03688.hp1	intron_variant	MODIFIER	c.288+750C>T c.288+750C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136651147
chrX:136651254	C C	T T	12	a0001c0002t0001g0011 a0001c0002t0002g0006 a0001c0002t0003g0053 others(9): Show a0001c0002t0001g0011 a0001c0002t0002g0006 a0001c0002t0003g0053 a0001c0002t0004g0011 a0001c0002t0004g0024 a0001c0002t0006g0006 a0001c0002t0009g0006 a0001c0002t0013g0054 a0001c0002t0048g0006 a0001c0002t0057g0025 a0002c0003t0080g0019 a0002c0003t0081g0019	19	HG00733.hp2 HG01069.hp1 HG01071.hp1 others(16): Show HG00733.hp2 HG01069.hp1 HG01071.hp1 HG01081.hp1 HG01257.hp1 HG01346.hp1 HG01433.hp1 HG01928.hp1 HG01943.hp1 HG01993.hp1 HG02004.hp2 HG02080.hp2 HG03491.hp2 HG03492.hp1 HG03710.hp1 HG03834.hp2 HG04115.hp1 HG04204.hp1 HG04228.hp1	intron_variant	MODIFIER	c.288+857C>T c.288+857C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136651254
chrX:136651638	C C	T T	1	a0001c0001t0085g0061 a0001c0001t0085g0061	1	HG03139.hp1 HG03139.hp1	intron_variant	MODIFIER	c.288+1241C>T c.288+1241C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136651638
chrX:136651738	C C	T T	1	a0001c0001t0015g0059 a0001c0001t0015g0059	1	NA19030.hp2 NA19030.hp2	intron_variant	MODIFIER	c.288+1341C>T c.288+1341C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136651738
chrX:136651890	A A	C C	1	a0001c0001t0013g0052 a0001c0001t0013g0052	1	HG01081.hp2 HG01081.hp2	intron_variant	MODIFIER	c.288+1493A>C c.288+1493A>C	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136651890
chrX:136651898	G G	A A	1	a0001c0001t0001g0030 a0001c0001t0001g0030	1	NA18962.hp1 NA18962.hp1	intron_variant	MODIFIER	c.288+1501G>A c.288+1501G>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136651898
chrX:136651914	TC TC	T T	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.288+1522delC c.288+1522delC	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	136651914
chrX:136651919	C C	T T	1	a0001c0001t0071g0029 a0001c0001t0071g0029	1	HG01109.hp1 HG01109.hp1	intron_variant	MODIFIER	c.288+1522C>T c.288+1522C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136651919
chrX:136651922	G G	C C	1	a0001c0002t0006g0031 a0001c0002t0006g0031	1	HG03486.hp1 HG03486.hp1	intron_variant	MODIFIER	c.288+1525G>C c.288+1525G>C	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136651922
chrX:136652135	GC GC	G G	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.288+1742delC c.288+1742delC	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	136652135
chrX:136652202	C C	A A	8	a0001c0001t0013g0008 a0001c0001t0032g0008 a0001c0001t0032g0014 others(5): Show a0001c0001t0013g0008 a0001c0001t0032g0008 a0001c0001t0032g0014 a0001c0001t0035g0008 a0001c0001t0067g0008 a0001c0001t0072g0014 a0001c0001t0073g0008 a0001c0001t0079g0028	8	HG02257.hp2 HG02451.hp1 HG02451.hp2 others(5): Show HG02257.hp2 HG02451.hp1 HG02451.hp2 HG02809.hp2 HG02896.hp2 HG02897.hp1 HG06807.hp1 NA20129.hp2	intron_variant	MODIFIER	c.288+1805C>A c.288+1805C>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136652202
chrX:136652280	A A	C C	5	a0001c0001t0034g0013 a0001c0001t0034g0062 a0001c0001t0037g0013 others(2): Show a0001c0001t0034g0013 a0001c0001t0034g0062 a0001c0001t0037g0013 a0001c0001t0038g0023 a0001c0006t0013g0050	6	HG01891.hp1 HG02280.hp1 HG02615.hp2 others(3): Show HG01891.hp1 HG02280.hp1 HG02615.hp2 HG02818.hp2 HG03130.hp1 NA20300.hp1	intron_variant	MODIFIER	c.288+1883A>C c.288+1883A>C	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136652280
chrX:136652309	C C	CCCT CCCT	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.288+1914_288+1915i others(5): Show c.288+1914_288+1915insTCC	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	136652309
chrX:136652310	C C	CCCCAAAT others(2): Show CCCCAAATTT	1	a0001c0001t0006g0056 a0001c0001t0006g0056	1	NA18942.hp2 NA18942.hp2	intron_variant	MODIFIER	c.288+1915_288+1923d others(11): Show c.288+1915_288+1923dupCCAAATTTC	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	136652310
chrX:136652328	A A	AC AC	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.288+1931_288+1932i others(3): Show c.288+1931_288+1932insC	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136652328
chrX:136652333	A A	G G	19	a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0011g0003 others(16): Show a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0011g0003 a0001c0001t0015g0003 a0001c0001t0015g0059 a0001c0001t0016g0003 a0001c0001t0016g0010 a0001c0001t0024g0060 a0001c0001t0027g0003 a0001c0001t0027g0010 a0001c0001t0038g0022 a0001c0001t0039g0022 a0001c0001t0083g0003 a0001c0001t0084g0003 a0001c0001t0085g0061 a0001c0001t0088g0003 a0001c0001t0089g0003 a0001c0001t0090g0010 a0001c0001t0091g0003	32	HG01123.hp2 HG01884.hp1 HG01884.hp2 others(29): Show HG01123.hp2 HG01884.hp1 HG01884.hp2 HG02055.hp1 HG02109.hp1 HG02257.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02809.hp1 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02965.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03516.hp1 HG03540.hp1 HG06807.hp2 NA18906.hp2 NA19030.hp2 NA19240.hp1 NA20129.hp1 NA20805.hp1 NA21309.hp2	intron_variant	MODIFIER	c.288+1936A>G c.288+1936A>G	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136652333
chrX:136652401	CT CT	C C	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.289-1970delT c.289-1970delT	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	136652401
chrX:136652429	CG CG	C C	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.289-1941delG c.289-1941delG	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	136652429
chrX:136652483	GA GA	G G	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.289-1888delA c.289-1888delA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	136652483
chrX:136652950	G G	GA GA	1	a0001c0001t0008g0032 a0001c0001t0008g0032	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.289-1413dupA c.289-1413dupA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	136652950
chrX:136652953	A A	T T	1	a0001c0001t0019g0049 a0001c0001t0019g0049	1	HG04184.hp2 HG04184.hp2	intron_variant	MODIFIER	c.289-1420A>T c.289-1420A>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136652953
chrX:136653202	G G	A A	1	a0001c0006t0013g0050 a0001c0006t0013g0050	1	HG01891.hp1 HG01891.hp1	intron_variant	MODIFIER	c.289-1171G>A c.289-1171G>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136653202
chrX:136653260	G G	A A	1	a0001c0002t0057g0025 a0001c0002t0057g0025	1	HG04115.hp1 HG04115.hp1	intron_variant	MODIFIER	c.289-1113G>A c.289-1113G>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136653260
chrX:136653287	G G	GC GC	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.289-1083dupC c.289-1083dupC	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	136653287
chrX:136653374	A A	AG AG	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.289-996dupG c.289-996dupG	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	136653374
chrX:136653403	TG TG	T T	1	a0001c0001t0008g0032 a0001c0001t0008g0032	1	NA19062.hp1 NA19062.hp1	intron_variant	MODIFIER	c.289-967delG c.289-967delG	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	136653403
chrX:136653451	T T	C C	1	a0001c0001t0009g0033 a0001c0001t0009g0033	1	HG00621.hp1 HG00621.hp1	intron_variant	MODIFIER	c.289-922T>C c.289-922T>C	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136653451
chrX:136653699	GT GT	G G	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.289-671delT c.289-671delT	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	136653699
chrX:136653781	C C	T T	2	a0001c0001t0046g0020 a0001c0001t0047g0020 a0001c0001t0046g0020 a0001c0001t0047g0020	2	HG01496.hp1 NA18906.hp1 HG01496.hp1 NA18906.hp1	intron_variant	MODIFIER	c.289-592C>T c.289-592C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136653781
chrX:136653948	CA CA	C C	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.289-422delA c.289-422delA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	136653948
chrX:136653972	C C	G G	1	a0001c0001t0039g0048 a0001c0001t0039g0048	1	HG02886.hp2 HG02886.hp2	intron_variant	MODIFIER	c.289-401C>G c.289-401C>G	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136653972
chrX:136654003	C C	G G	1	a0001c0001t0017g0047 a0001c0001t0017g0047	1	HG02572.hp1 HG02572.hp1	intron_variant	MODIFIER	c.289-370C>G c.289-370C>G	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136654003
chrX:136654046	T T	C C	12	a0001c0002t0001g0011 a0001c0002t0002g0006 a0001c0002t0003g0053 others(9): Show a0001c0002t0001g0011 a0001c0002t0002g0006 a0001c0002t0003g0053 a0001c0002t0004g0011 a0001c0002t0004g0024 a0001c0002t0006g0006 a0001c0002t0009g0006 a0001c0002t0013g0054 a0001c0002t0048g0006 a0001c0002t0057g0025 a0002c0003t0080g0019 a0002c0003t0081g0019	19	HG00733.hp2 HG01069.hp1 HG01071.hp1 others(16): Show HG00733.hp2 HG01069.hp1 HG01071.hp1 HG01081.hp1 HG01257.hp1 HG01346.hp1 HG01433.hp1 HG01928.hp1 HG01943.hp1 HG01993.hp1 HG02004.hp2 HG02080.hp2 HG03491.hp2 HG03492.hp1 HG03710.hp1 HG03834.hp2 HG04115.hp1 HG04204.hp1 HG04228.hp1	intron_variant	MODIFIER	c.289-327T>C c.289-327T>C	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136654046
chrX:136654249	C C	CA CA	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.289-124_289-123ins others(1): Show c.289-124_289-123insA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136654249
chrX:136654252	TA TA	T T	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.289-120delA c.289-120delA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136654252
chrX:136654288	T T	TG TG	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.289-84dupG c.289-84dupG	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4	INFO_REALIGN_3_PRIME	chrX	136654288
chrX:136654302	C C	T T	1	a0001c0001t0052g0046 a0001c0001t0052g0046	1	NA19076.hp1 NA19076.hp1	intron_variant	MODIFIER	c.289-71C>T c.289-71C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	2/4		chrX	136654302
chrX:136654464	C C	CT CT	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.346+35dupT c.346+35dupT	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	136654464
chrX:136654486	A A	AG AG	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.346+58dupG c.346+58dupG	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	136654486
chrX:136654523	AG AG	A A	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.346+96delG c.346+96delG	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	136654523
chrX:136654601	A A	AG AG	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.346+172dupG c.346+172dupG	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	136654601
chrX:136654634	TG TG	T T	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.346+205delG c.346+205delG	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	3/4		chrX	136654634
chrX:136654746	G G	GA GA	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.346+319dupA c.346+319dupA	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	136654746
chrX:136654767	G G	A A	1	a0001c0001t0052g0046 a0001c0001t0052g0046	1	NA19076.hp1 NA19076.hp1	intron_variant	MODIFIER	c.346+337G>A c.346+337G>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	3/4		chrX	136654767
chrX:136654793	G G	GT GT	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.346+368dupT c.346+368dupT	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	136654793
chrX:136655058	G G	A A	33	a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0010g0002 others(30): Show a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0010g0002 a0001c0001t0015g0059 a0001c0001t0016g0010 a0001c0001t0026g0002 a0001c0001t0027g0010 a0001c0001t0087g0034 a0001c0001t0090g0010 a0001c0002t0005g0002 a0001c0002t0005g0005 a0001c0002t0005g0027 a0001c0002t0006g0031 a0001c0002t0007g0002 a0001c0002t0010g0002 a0001c0002t0010g0005 a0001c0002t0010g0016 a0001c0002t0017g0002 a0001c0002t0017g0035 a0001c0002t0021g0002 a0001c0002t0021g0058 a0001c0002t0022g0002 a0001c0002t0023g0002 a0001c0002t0023g0005 a0001c0002t0025g0005 a0001c0002t0025g0036 a0001c0002t0026g0002 a0001c0002t0040g0002 a0001c0002t0041g0017 a0001c0002t0049g0005 a0001c0002t0063g0002 a0001c0002t0075g0002 a0001c0002t0078g0002	51	HG00423.hp2 HG00438.hp1 HG00735.hp2 others(48): Show HG00423.hp2 HG00438.hp1 HG00735.hp2 HG00741.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01255.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01884.hp1 HG01891.hp2 HG01952.hp1 HG01981.hp1 HG02004.hp1 HG02300.hp1 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02615.hp1 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG03041.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp2 HG03831.hp1 HG03831.hp2 HG04199.hp1 NA18940.hp1 NA18942.hp1 NA18944.hp1 NA18949.hp1 NA18950.hp1 NA18954.hp1 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18971.hp1 NA19030.hp2 NA19066.hp1 NA19077.hp1 NA19083.hp1 NA19087.hp2 NA20300.hp2 NA20805.hp1 NA21309.hp2	intron_variant	MODIFIER	c.346+628G>A c.346+628G>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	3/4		chrX	136655058
chrX:136655067	A A	AT AT	1	a0004c0008t0018g0051 a0004c0008t0018g0051	1	NA18988.hp1 NA18988.hp1	intron_variant	MODIFIER	c.346+638dupT c.346+638dupT	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	3/4	INFO_REALIGN_3_PRIME	chrX	136655067
chrX:136655188	T T	C C	6	a0001c0001t0013g0008 a0001c0001t0032g0008 a0001c0001t0035g0008 others(3): Show a0001c0001t0013g0008 a0001c0001t0032g0008 a0001c0001t0035g0008 a0001c0001t0067g0008 a0001c0001t0073g0008 a0001c0006t0013g0050	6	HG01891.hp1 HG02257.hp2 HG02451.hp2 others(3): Show HG01891.hp1 HG02257.hp2 HG02451.hp2 HG02809.hp2 HG06807.hp1 NA20129.hp2	intron_variant	MODIFIER	c.346+758T>C c.346+758T>C	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	3/4		chrX	136655188
chrX:136655268	A A	T T	2	a0001c0001t0046g0020 a0001c0001t0047g0020 a0001c0001t0046g0020 a0001c0001t0047g0020	2	HG01496.hp1 NA18906.hp1 HG01496.hp1 NA18906.hp1	intron_variant	MODIFIER	c.346+838A>T c.346+838A>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	3/4		chrX	136655268
chrX:136655326	C C	G G	2	a0001c0002t0005g0045 a0001c0002t0041g0017 a0001c0002t0005g0045 a0001c0002t0041g0017	3	HG01167.hp1 HG01169.hp1 HG02145.hp1 HG01167.hp1 HG01169.hp1 HG02145.hp1	intron_variant	MODIFIER	c.346+896C>G c.346+896C>G	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	3/4		chrX	136655326
chrX:136655338	A A	G G	1	a0001c0001t0001g0044 a0001c0001t0001g0044	1	HG02165.hp2 HG02165.hp2	intron_variant	MODIFIER	c.346+908A>G c.346+908A>G	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	3/4		chrX	136655338
chrX:136655554	A A	G G	1	a0001c0001t0079g0028 a0001c0001t0079g0028	1	HG02451.hp1 HG02451.hp1	intron_variant	MODIFIER	c.347-802A>G c.347-802A>G	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	3/4		chrX	136655554
chrX:136656127	T T	C C	1	a0001c0002t0004g0024 a0001c0002t0004g0024	1	HG03834.hp2 HG03834.hp2	intron_variant	MODIFIER	c.347-229T>C c.347-229T>C	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	3/4		chrX	136656127
chrX:136656238	T T	C C	1	a0001c0002t0003g0053 a0001c0002t0003g0053	1	HG01433.hp1 HG01433.hp1	intron_variant	MODIFIER	c.347-118T>C c.347-118T>C	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	3/4		chrX	136656238
chrX:136656472	C C	T T	1	a0001c0001t0086g0043 a0001c0001t0086g0043	1	NA19240.hp2 NA19240.hp2	intron_variant	MODIFIER	c.409+54C>T c.409+54C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136656472
chrX:136656539	A A	G G	13	a0001c0001t0003g0004 a0001c0001t0003g0026 a0001c0001t0006g0004 others(10): Show a0001c0001t0003g0004 a0001c0001t0003g0026 a0001c0001t0006g0004 a0001c0001t0006g0056 a0001c0001t0007g0004 a0001c0001t0007g0042 a0001c0001t0009g0004 a0001c0001t0009g0009 a0001c0001t0012g0004 a0001c0001t0012g0009 a0001c0001t0020g0004 a0001c0001t0022g0004 a0001c0001t0036g0004	19	HG00408.hp1 HG00423.hp1 HG02027.hp1 others(16): Show HG00408.hp1 HG00423.hp1 HG02027.hp1 NA18942.hp2 NA18946.hp2 NA18947.hp1 NA18949.hp2 NA18952.hp1 NA18968.hp1 NA18974.hp1 NA18975.hp2 NA18980.hp2 NA19004.hp1 NA19057.hp1 NA19058.hp1 NA19067.hp1 NA19072.hp1 NA19077.hp2 NA19088.hp1	intron_variant	MODIFIER	c.409+121A>G c.409+121A>G	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136656539
chrX:136656552	T T	A A	1	a0001c0002t0074g0037 a0001c0002t0074g0037	1	HG03209.hp1 HG03209.hp1	intron_variant	MODIFIER	c.409+134T>A c.409+134T>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136656552
chrX:136656589	A A	G G	6	a0001c0002t0005g0005 a0001c0002t0005g0027 a0001c0002t0010g0005 others(3): Show a0001c0002t0005g0005 a0001c0002t0005g0027 a0001c0002t0010g0005 a0001c0002t0023g0005 a0001c0002t0025g0005 a0001c0002t0049g0005	12	HG00423.hp2 HG00741.hp1 HG01952.hp1 others(9): Show HG00423.hp2 HG00741.hp1 HG01952.hp1 HG02602.hp1 HG03831.hp1 NA18942.hp1 NA18950.hp1 NA18954.hp1 NA18960.hp1 NA18961.hp1 NA19066.hp1 NA19087.hp2	intron_variant	MODIFIER	c.409+171A>G c.409+171A>G	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136656589
chrX:136656764	A A	C C	50	a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0010g0002 others(47): Show a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0010g0002 a0001c0001t0011g0003 a0001c0001t0015g0003 a0001c0001t0015g0059 a0001c0001t0016g0003 a0001c0001t0016g0010 a0001c0001t0026g0002 a0001c0001t0027g0003 a0001c0001t0027g0010 a0001c0001t0042g0018 a0001c0001t0071g0029 a0001c0001t0079g0028 a0001c0001t0083g0003 a0001c0001t0084g0003 a0001c0001t0085g0061 a0001c0001t0086g0043 a0001c0001t0087g0034 a0001c0001t0088g0003 a0001c0001t0089g0003 a0001c0001t0090g0010 a0001c0001t0091g0003 a0001c0002t0005g0002 a0001c0002t0005g0005 a0001c0002t0005g0027 a0001c0002t0005g0045 a0001c0002t0006g0031 a0001c0002t0007g0002 a0001c0002t0010g0002 a0001c0002t0010g0005 a0001c0002t0010g0016 a0001c0002t0017g0002 a0001c0002t0017g0035 a0001c0002t0021g0002 a0001c0002t0021g0058 a0001c0002t0022g0002 a0001c0002t0023g0002 a0001c0002t0023g0005 a0001c0002t0025g0005 a0001c0002t0025g0036 a0001c0002t0026g0002 a0001c0002t0040g0002 a0001c0002t0041g0017 a0001c0002t0049g0005 a0001c0002t0063g0002 a0001c0002t0075g0002 a0001c0002t0078g0002 a0002c0003t0080g0019 a0002c0003t0081g0019	81	HG00423.hp2 HG00438.hp1 HG00735.hp2 others(78): Show HG00423.hp2 HG00438.hp1 HG00735.hp2 HG00741.hp1 HG01109.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01255.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01884.hp1 HG01891.hp2 HG01952.hp1 HG01981.hp1 HG02004.hp1 HG02055.hp1 HG02080.hp2 HG02109.hp1 HG02145.hp1 HG02257.hp1 HG02300.hp1 HG02451.hp1 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02615.hp1 HG02630.hp1 HG02647.hp1 HG02809.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03831.hp1 HG03831.hp2 HG04199.hp1 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp2 NA18940.hp1 NA18942.hp1 NA18944.hp1 NA18949.hp1 NA18950.hp1 NA18954.hp1 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18971.hp1 NA19030.hp1 NA19030.hp2 NA19066.hp1 NA19077.hp1 NA19083.hp1 NA19087.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp2 NA20805.hp1 NA21309.hp2	intron_variant	MODIFIER	c.409+346A>C c.409+346A>C	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136656764
chrX:136656865	A A	C C	1	a0001c0002t0004g0024 a0001c0002t0004g0024	1	HG03834.hp2 HG03834.hp2	intron_variant	MODIFIER	c.409+447A>C c.409+447A>C	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136656865
chrX:136656935	C C	T T	1	a0001c0002t0010g0016 a0001c0002t0010g0016	2	HG00438.hp1 NA19077.hp1 HG00438.hp1 NA19077.hp1	intron_variant	MODIFIER	c.409+517C>T c.409+517C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136656935
chrX:136657103	T T	C C	16	a0001c0001t0011g0003 a0001c0001t0015g0003 a0001c0001t0015g0059 others(13): Show a0001c0001t0011g0003 a0001c0001t0015g0003 a0001c0001t0015g0059 a0001c0001t0016g0003 a0001c0001t0016g0010 a0001c0001t0027g0003 a0001c0001t0027g0010 a0001c0001t0083g0003 a0001c0001t0084g0003 a0001c0001t0085g0061 a0001c0001t0086g0043 a0001c0001t0087g0034 a0001c0001t0088g0003 a0001c0001t0089g0003 a0001c0001t0090g0010 a0001c0001t0091g0003	29	HG01123.hp2 HG01884.hp1 HG02055.hp1 others(26): Show HG01123.hp2 HG01884.hp1 HG02055.hp1 HG02109.hp1 HG02257.hp1 HG02630.hp1 HG02647.hp1 HG02809.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02976.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03516.hp1 HG03540.hp1 HG06807.hp2 NA18906.hp2 NA18971.hp1 NA19030.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20805.hp1 NA21309.hp2	intron_variant	MODIFIER	c.409+685T>C c.409+685T>C	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136657103
chrX:136657219	G G	A A	47	a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0010g0002 others(44): Show a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0010g0002 a0001c0001t0011g0003 a0001c0001t0015g0003 a0001c0001t0015g0059 a0001c0001t0016g0003 a0001c0001t0016g0010 a0001c0001t0026g0002 a0001c0001t0027g0003 a0001c0001t0027g0010 a0001c0001t0071g0029 a0001c0001t0079g0028 a0001c0001t0083g0003 a0001c0001t0084g0003 a0001c0001t0085g0061 a0001c0001t0086g0043 a0001c0001t0087g0034 a0001c0001t0088g0003 a0001c0001t0089g0003 a0001c0001t0090g0010 a0001c0001t0091g0003 a0001c0002t0005g0002 a0001c0002t0005g0005 a0001c0002t0005g0027 a0001c0002t0005g0045 a0001c0002t0006g0031 a0001c0002t0007g0002 a0001c0002t0010g0002 a0001c0002t0010g0005 a0001c0002t0010g0016 a0001c0002t0017g0002 a0001c0002t0017g0035 a0001c0002t0021g0002 a0001c0002t0021g0058 a0001c0002t0022g0002 a0001c0002t0023g0002 a0001c0002t0023g0005 a0001c0002t0025g0005 a0001c0002t0025g0036 a0001c0002t0026g0002 a0001c0002t0040g0002 a0001c0002t0041g0017 a0001c0002t0049g0005 a0001c0002t0063g0002 a0001c0002t0075g0002 a0001c0002t0078g0002	77	HG00423.hp2 HG00438.hp1 HG00735.hp2 others(74): Show HG00423.hp2 HG00438.hp1 HG00735.hp2 HG00741.hp1 HG01109.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01255.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01884.hp1 HG01891.hp2 HG01952.hp1 HG01981.hp1 HG02004.hp1 HG02055.hp1 HG02109.hp1 HG02145.hp1 HG02257.hp1 HG02300.hp1 HG02451.hp1 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02615.hp1 HG02630.hp1 HG02647.hp1 HG02809.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03831.hp1 HG03831.hp2 HG04199.hp1 HG06807.hp2 NA18906.hp2 NA18940.hp1 NA18942.hp1 NA18944.hp1 NA18949.hp1 NA18950.hp1 NA18954.hp1 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18971.hp1 NA19030.hp2 NA19066.hp1 NA19077.hp1 NA19083.hp1 NA19087.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp2 NA20805.hp1 NA21309.hp2	intron_variant	MODIFIER	c.409+801G>A c.409+801G>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136657219
chrX:136657229	A A	G G	1	a0001c0001t0003g0041 a0001c0001t0003g0041	1	HG00408.hp2 HG00408.hp2	intron_variant	MODIFIER	c.409+811A>G c.409+811A>G	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136657229
chrX:136657347	C C	G G	1	a0001c0002t0074g0037 a0001c0002t0074g0037	1	HG03209.hp1 HG03209.hp1	intron_variant	MODIFIER	c.409+929C>G c.409+929C>G	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136657347
chrX:136657350	T T	C C	1	a0001c0002t0017g0035 a0001c0002t0017g0035	1	HG01255.hp1 HG01255.hp1	intron_variant	MODIFIER	c.409+932T>C c.409+932T>C	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136657350
chrX:136657513	G G	A A	16	a0001c0001t0011g0003 a0001c0001t0015g0003 a0001c0001t0015g0059 others(13): Show a0001c0001t0011g0003 a0001c0001t0015g0003 a0001c0001t0015g0059 a0001c0001t0016g0003 a0001c0001t0016g0010 a0001c0001t0027g0003 a0001c0001t0027g0010 a0001c0001t0083g0003 a0001c0001t0084g0003 a0001c0001t0085g0061 a0001c0001t0086g0043 a0001c0001t0087g0034 a0001c0001t0088g0003 a0001c0001t0089g0003 a0001c0001t0090g0010 a0001c0001t0091g0003	29	HG01123.hp2 HG01884.hp1 HG02055.hp1 others(26): Show HG01123.hp2 HG01884.hp1 HG02055.hp1 HG02109.hp1 HG02257.hp1 HG02630.hp1 HG02647.hp1 HG02809.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02976.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03516.hp1 HG03540.hp1 HG06807.hp2 NA18906.hp2 NA18971.hp1 NA19030.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20805.hp1 NA21309.hp2	intron_variant	MODIFIER	c.409+1095G>A c.409+1095G>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136657513
chrX:136657996	C C	T T	1	a0001c0002t0074g0037 a0001c0002t0074g0037	1	HG03209.hp1 HG03209.hp1	intron_variant	MODIFIER	c.410-1043C>T c.410-1043C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136657996
chrX:136658064	T T	A A	1	a0001c0002t0025g0036 a0001c0002t0025g0036	1	HG01168.hp1 HG01168.hp1	intron_variant	MODIFIER	c.410-975T>A c.410-975T>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136658064
chrX:136658123	G G	A A	16	a0001c0001t0011g0003 a0001c0001t0015g0003 a0001c0001t0015g0059 others(13): Show a0001c0001t0011g0003 a0001c0001t0015g0003 a0001c0001t0015g0059 a0001c0001t0016g0003 a0001c0001t0016g0010 a0001c0001t0027g0003 a0001c0001t0027g0010 a0001c0001t0083g0003 a0001c0001t0084g0003 a0001c0001t0085g0061 a0001c0001t0086g0043 a0001c0001t0087g0034 a0001c0001t0088g0003 a0001c0001t0089g0003 a0001c0001t0090g0010 a0001c0001t0091g0003	29	HG01123.hp2 HG01884.hp1 HG02055.hp1 others(26): Show HG01123.hp2 HG01884.hp1 HG02055.hp1 HG02109.hp1 HG02257.hp1 HG02630.hp1 HG02647.hp1 HG02809.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02976.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03516.hp1 HG03540.hp1 HG06807.hp2 NA18906.hp2 NA18971.hp1 NA19030.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20805.hp1 NA21309.hp2	intron_variant	MODIFIER	c.410-916G>A c.410-916G>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136658123
chrX:136658181	AT AT	A A	1	a0001c0001t0007g0042 a0001c0001t0007g0042	1	NA19058.hp1 NA19058.hp1	intron_variant	MODIFIER	c.410-852delT c.410-852delT	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4	INFO_REALIGN_3_PRIME	chrX	136658181
chrX:136658287	C C	T T	16	a0001c0001t0011g0003 a0001c0001t0015g0003 a0001c0001t0015g0059 others(13): Show a0001c0001t0011g0003 a0001c0001t0015g0003 a0001c0001t0015g0059 a0001c0001t0016g0003 a0001c0001t0016g0010 a0001c0001t0027g0003 a0001c0001t0027g0010 a0001c0001t0083g0003 a0001c0001t0084g0003 a0001c0001t0085g0061 a0001c0001t0086g0043 a0001c0001t0087g0034 a0001c0001t0088g0003 a0001c0001t0089g0003 a0001c0001t0090g0010 a0001c0001t0091g0003	29	HG01123.hp2 HG01884.hp1 HG02055.hp1 others(26): Show HG01123.hp2 HG01884.hp1 HG02055.hp1 HG02109.hp1 HG02257.hp1 HG02630.hp1 HG02647.hp1 HG02809.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02976.hp2 HG03098.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03516.hp1 HG03540.hp1 HG06807.hp2 NA18906.hp2 NA18971.hp1 NA19030.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20805.hp1 NA21309.hp2	intron_variant	MODIFIER	c.410-752C>T c.410-752C>T	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136658287
chrX:136658328	G G	A A	8	a0001c0001t0034g0013 a0001c0001t0034g0062 a0001c0001t0037g0013 others(5): Show a0001c0001t0034g0013 a0001c0001t0034g0062 a0001c0001t0037g0013 a0001c0001t0038g0022 a0001c0001t0038g0023 a0001c0001t0039g0022 a0001c0001t0039g0048 a0001c0002t0069g0038	9	HG01243.hp1 HG02280.hp1 HG02615.hp2 others(6): Show HG01243.hp1 HG02280.hp1 HG02615.hp2 HG02630.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG03130.hp1 NA20300.hp1	intron_variant	MODIFIER	c.410-711G>A c.410-711G>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136658328
chrX:136658390	GTTGGTGG others(26): Show GTTGGTGGCGCCCACTACAATGGGAGATCAAAAC	G G	1	a0001c0002t0013g0054 a0001c0002t0013g0054	1	HG01081.hp1 HG01081.hp1	intron_variant	MODIFIER	c.410-648_410-616del others(33): Show c.410-648_410-616delTTGGTGGCGCCCACTACAATGGGAGATCAA AAC	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136658390
chrX:136658863	G G	A A	1	a0001c0002t0069g0038 a0001c0002t0069g0038	1	HG01243.hp1 HG01243.hp1	intron_variant	MODIFIER	c.410-176G>A c.410-176G>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136658863
chrX:136658960	C C	A A	1	a0001c0001t0002g0039 a0001c0001t0002g0039	1	NA18945.hp1 NA18945.hp1	intron_variant	MODIFIER	c.410-79C>A c.410-79C>A	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136658960
chrX:136659026	T T	C C	72	a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0010g0002 others(69): Show a0001c0001t0005g0021 a0001c0001t0006g0021 a0001c0001t0010g0002 a0001c0001t0011g0003 a0001c0001t0013g0008 a0001c0001t0015g0003 a0001c0001t0015g0059 a0001c0001t0016g0003 a0001c0001t0016g0010 a0001c0001t0026g0002 a0001c0001t0027g0003 a0001c0001t0027g0010 a0001c0001t0032g0008 a0001c0001t0032g0014 a0001c0001t0034g0013 a0001c0001t0034g0062 a0001c0001t0035g0008 a0001c0001t0037g0013 a0001c0001t0038g0022 a0001c0001t0038g0023 a0001c0001t0039g0022 a0001c0001t0039g0048 a0001c0001t0042g0018 a0001c0001t0046g0020 a0001c0001t0047g0020 a0001c0001t0067g0008 a0001c0001t0071g0029 a0001c0001t0072g0014 a0001c0001t0073g0008 a0001c0001t0079g0028 a0001c0001t0083g0003 a0001c0001t0084g0003 a0001c0001t0085g0061 a0001c0001t0086g0043 a0001c0001t0087g0034 a0001c0001t0088g0003 a0001c0001t0089g0003 a0001c0001t0090g0010 a0001c0001t0091g0003 a0001c0002t0005g0002 a0001c0002t0005g0005 a0001c0002t0005g0027 a0001c0002t0005g0045 a0001c0002t0006g0031 a0001c0002t0007g0002 a0001c0002t0010g0002 a0001c0002t0010g0005 a0001c0002t0010g0016 a0001c0002t0017g0002 a0001c0002t0017g0035 a0001c0002t0021g0002 a0001c0002t0021g0058 a0001c0002t0022g0002 a0001c0002t0023g0002 a0001c0002t0023g0005 a0001c0002t0025g0005 a0001c0002t0025g0036 a0001c0002t0026g0002 a0001c0002t0040g0002 a0001c0002t0041g0017 a0001c0002t0049g0005 a0001c0002t0050g0040 a0001c0002t0063g0002 a0001c0002t0069g0038 a0001c0002t0074g0037 a0001c0002t0075g0002 a0001c0002t0078g0002 a0001c0005t0064g0015 a0001c0005t0068g0015 a0001c0006t0013g0050 a0002c0003t0080g0019 a0002c0003t0081g0019	104	HG00423.hp2 HG00438.hp1 HG00735.hp2 others(101): Show HG00423.hp2 HG00438.hp1 HG00735.hp2 HG00741.hp1 HG01109.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp1 HG01255.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01496.hp1 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01952.hp1 HG01981.hp1 HG02004.hp1 HG02055.hp1 HG02080.hp2 HG02109.hp1 HG02145.hp1 HG02257.hp1 HG02257.hp2 HG02280.hp1 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03831.hp1 HG03831.hp2 HG04199.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18942.hp1 NA18944.hp1 NA18949.hp1 NA18950.hp1 NA18954.hp1 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18971.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19066.hp1 NA19077.hp1 NA19083.hp1 NA19087.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA21309.hp2	intron_variant	MODIFIER	c.410-13T>C c.410-13T>C	CD40LG	ENSG00000102245.9	transcript	ENST00000370629.7	protein_coding	4/4		chrX	136659026

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🧬 JoGo Online Haplotype Explorer CD40LG_chrX_136643158_136665390

JoGo Local Haplotype Explorer (on iGV) CD40LG_chrX_136643158_136665390

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ACTG-Haplotype Mutation Positions 3D Viewer

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 4)

CCoding Level Haplotype Info (Total: 8)

TTranscript Level Haplotype Info (Total: 92)

GGenebody Level Haplotype Info (Total: 62)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 8)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 109)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 158)

Haplotype Details by Sample (Haploid Level) (Total: 287)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 3)

CCoding Level Variants (Synonymous Mutations) (Total: 4)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 55)

GGenebody Level Haplotype Variants (Intron) (Total: 96)

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Annotation (Repeats)

Annotation (SNP Array)