JoGo: Joint Open Genome and Omics Platform

Search by Genic region

geneid	1101
ensemblid	ENSG00000136457.10
hgncid	1909
symbol	CHAD
name	chondroadherin
refseq_nuc	NM_001267.3
refseq_prot	NP_001258.2
ensembl_nuc	ENST00000508540.6
ensembl_prot	ENSP00000423812.1
mane_status	MANE Select
chr	chr17
start	50464496
end	50468880
strand	-
ver	v1.2
region	chr17:50464496-50468880
region5000	chr17:50459496-50473880
regionname0	CHAD_chr17_50464496_50468880
regionname5000	CHAD_chr17_50459496_50473880

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	359	363	72	72	161	16	40	123	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0002	0/0	359	7	7	0	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0003	0/0	359	6	3	3	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0004	0/0	359	5	4	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0005	0/0	359	2	0	0	0	0	2	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0006	0/0	359	1	0	0	1	0	0	1	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0007	0/0	359	1	0	0	1	0	0	1	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0008	0/0	359	1	0	0	1	0	0	1	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/0	1080	273	65	41	124	12	30	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
c0002	0/1	1080	83	7	26	35	4	10	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
c0003	0/0	1080	6	3	3	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
c0004	0/0	1080	5	5	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
c0005	0/0	1080	5	4	1	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
c0006	0/0	1080	3	0	3	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
c0007	0/0	1080	2	2	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
c0008	0/0	1080	2	0	2	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
c0009	0/0	1080	2	0	0	0	0	2	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
c0010	0/0	1080	2	0	0	2	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
c0011	0/0	1080	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
c0012	0/0	1080	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
c0013	0/0	1080	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/0	626	187	20	29	109	10	18	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
t0002	0/0	627	54	13	13	16	2	10	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
t0003	0/1	630	51	19	16	10	0	5	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
t0004	0/0	629	50	14	11	16	4	5	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
t0005	0/0	627	20	5	3	9	0	3	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
t0006	0/0	627	5	5	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
t0007	0/0	626	5	4	1	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
t0008	0/0	626	3	0	0	3	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
t0009	0/0	629	3	3	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
t0010	0/0	627	2	0	2	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
t0011	0/0	627	1	0	0	0	0	1	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
t0012	0/0	626	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
t0013	0/0	630	1	0	1	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
t0014	0/0	627	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
t0015	0/0	626	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
t0016	0/0	630	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/0	148	8	21	92	10	16	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0002	0/0	48	12	13	13	1	9	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0003	0/1	30	5	11	8	0	5	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0004	0/0	29	1	8	13	3	4	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0005	0/0	13	0	1	9	0	3	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0006	0/0	10	1	1	8	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0007	0/0	9	9	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0008	0/0	5	5	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0009	0/0	5	4	1	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0010	0/0	5	0	2	2	1	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0011	0/0	4	4	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0012	0/0	4	0	1	3	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0013	0/0	3	2	1	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0014	0/0	3	1	2	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0015	0/0	3	0	3	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0016	0/0	3	0	3	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0017	0/0	3	0	0	3	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0018	0/0	3	0	2	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0019	0/0	3	3	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0020	0/0	2	2	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0021	0/0	2	2	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0022	0/0	2	2	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0023	0/0	2	2	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0024	0/0	2	0	2	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0025	0/0	2	0	0	2	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0026	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0027	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0028	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0029	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0030	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0031	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0032	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0033	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0034	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0035	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0036	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0037	0/0	1	0	1	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0038	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0039	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0040	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0041	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0042	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0043	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0044	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0045	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0046	0/0	1	0	0	0	0	1	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0047	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0048	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0049	0/0	1	0	1	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0050	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0051	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0052	0/0	1	0	0	0	0	1	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0053	0/0	1	0	1	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0054	0/0	1	0	0	0	0	1	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0055	0/0	1	0	0	0	0	1	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0056	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0057	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0058	0/0	1	0	0	0	1	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0059	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0060	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0061	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0062	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0063	0/0	1	0	0	0	0	1	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0064	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0065	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0066	0/0	1	0	1	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0067	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
g0068	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/0	1080	273	65	41	124	12	30	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0002	0/1	1080	83	7	26	35	4	10	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0006	0/0	1080	3	0	3	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0008	0/0	1080	2	0	2	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0010	0/0	1080	2	0	0	2	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0002c0004	0/0	1080	5	5	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0002c0007	0/0	1080	2	2	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0003c0003	0/0	1080	6	3	3	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0004c0005	0/0	1080	5	4	1	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0005c0009	0/0	1080	2	0	0	0	0	2	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0006c0013	0/0	1080	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0007c0011	0/0	1080	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0008c0012	0/0	1080	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/0	1705	167	17	25	97	10	17	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0001t0002	0/0	1706	52	13	13	14	2	10	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0001t0003	0/0	1709	13	13	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0001t0004	0/0	1708	11	11	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0001t0005	0/0	1706	20	5	3	9	0	3	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0001t0007	0/0	1705	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0001t0008	0/0	1705	3	0	0	3	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0001t0009	0/0	1708	2	2	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0001t0012	0/0	1705	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0001t0014	0/0	1706	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0001t0015	0/0	1705	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0001t0016	0/0	1709	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0002t0001	0/0	1705	11	1	1	9	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0002t0003	0/1	1709	35	5	14	10	0	5	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0002t0004	0/0	1708	35	1	10	16	4	4	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0002t0011	0/0	1706	1	0	0	0	0	1	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0002t0013	0/0	1709	1	0	1	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0006t0001	0/0	1705	3	0	3	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0008t0010	0/0	1706	2	0	2	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0001c0010t0002	0/0	1706	2	0	0	2	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0002c0004t0006	0/0	1706	5	5	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0002c0007t0001	0/0	1705	2	2	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0003c0003t0003	0/0	1709	3	1	2	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0003c0003t0004	0/0	1708	3	2	1	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0004c0005t0007	0/0	1705	4	3	1	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0004c0005t0009	0/0	1708	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0005c0009t0001	0/0	1705	1	0	0	0	0	1	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0005c0009t0004	0/0	1708	1	0	0	0	0	1	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0006c0013t0001	0/0	1705	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0007c0011t0001	0/0	1705	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880
a0008c0012t0001	0/0	1705	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	copy fasta	chr17	50459496	50473880

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/0	148	8	21	92	10	16	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0001g0012	0/0	4	0	1	3	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0001g0016	0/0	3	0	3	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0001g0021	0/0	2	2	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0001g0023	0/0	2	2	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0001g0030	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0001g0034	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0001g0035	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0001g0036	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0001g0038	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0001g0040	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0001g0045	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0001g0046	0/0	1	0	0	0	0	1	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0002g0002	0/0	48	12	13	13	1	9	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0002g0058	0/0	1	0	0	0	1	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0002g0063	0/0	1	0	0	0	0	1	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0002g0065	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0002g0068	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0003g0007	0/0	9	9	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0003g0032	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0003g0039	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0003g0042	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0003g0043	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0004g0008	0/0	5	5	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0004g0020	0/0	2	2	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0004g0022	0/0	2	2	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0004g0031	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0004g0041	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0005g0005	0/0	13	0	1	9	0	3	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0005g0009	0/0	5	4	1	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0005g0033	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0005g0037	0/0	1	0	1	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0007g0060	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0008g0017	0/0	3	0	0	3	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0009g0057	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0009g0061	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0012g0044	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0014g0059	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0015g0064	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0001t0016g0062	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0002t0001g0006	0/0	10	1	1	8	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0002t0001g0047	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0002t0003g0003	0/1	30	5	11	8	0	5	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0002t0003g0018	0/0	3	0	2	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0002t0003g0049	0/0	1	0	1	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0002t0003g0051	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0002t0004g0004	0/0	29	1	8	13	3	4	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0002t0004g0010	0/0	5	0	2	2	1	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0002t0004g0048	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0002t0011g0052	0/0	1	0	0	0	0	1	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0002t0013g0053	0/0	1	0	1	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0006t0001g0015	0/0	3	0	3	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0008t0010g0024	0/0	2	0	2	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0001c0010t0002g0025	0/0	2	0	0	2	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0002c0004t0006g0011	0/0	4	4	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0002c0004t0006g0028	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0002c0007t0001g0026	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0002c0007t0001g0027	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0003c0003t0003g0014	0/0	3	1	2	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0003c0003t0004g0013	0/0	3	2	1	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0004c0005t0007g0019	0/0	3	3	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0004c0005t0007g0066	0/0	1	0	1	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0004c0005t0009g0067	0/0	1	1	0	0	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0005c0009t0001g0054	0/0	1	0	0	0	0	1	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0005c0009t0004g0055	0/0	1	0	0	0	0	1	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0006c0013t0001g0056	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0007c0011t0001g0029	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
a0008c0012t0001g0050	0/0	1	0	0	1	0	0	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0002	t0004	g0004	EUR	GBR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00099	hp2	a0001	c0002	t0004	g0004	EUR	GBR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00140	hp2	a0001	c0001	t0001	g0001	EUR	GBR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00280	hp2	a0001	c0002	t0004	g0010	EUR	FIN	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00408	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00408	hp2	a0001	c0001	t0001	g0012	EAS	CHS	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00423	hp1	a0001	c0001	t0002	g0002	EAS	CHS	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00423	hp2	a0001	c0001	t0001	g0001	EAS	CHS	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00438	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00438	hp2	a0001	c0001	t0002	g0002	EAS	CHS	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00597	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00597	hp2	a0001	c0001	t0001	g0001	EAS	CHS	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00609	hp1	a0001	c0002	t0001	g0006	EAS	CHS	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00609	hp2	a0001	c0001	t0001	g0001	EAS	CHS	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00621	hp2	a0001	c0001	t0001	g0001	EAS	CHS	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00639	hp2	a0001	c0002	t0003	g0003	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00642	hp1	a0001	c0002	t0003	g0003	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00642	hp2	a0001	c0001	t0002	g0002	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00733	hp1	a0001	c0002	t0004	g0010	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00733	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00735	hp1	a0001	c0002	t0003	g0003	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00735	hp2	a0001	c0002	t0003	g0003	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00738	hp1	a0001	c0001	t0002	g0002	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00738	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00741	hp1	a0001	c0008	t0010	g0024	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG00741	hp2	a0001	c0002	t0004	g0004	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01069	hp2	a0001	c0001	t0005	g0009	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01070	hp1	a0001	c0001	t0002	g0002	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01070	hp2	a0001	c0002	t0004	g0004	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01074	hp1	a0001	c0002	t0013	g0053	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01074	hp2	a0001	c0002	t0004	g0004	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01081	hp1	a0001	c0002	t0003	g0003	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01081	hp2	a0001	c0002	t0003	g0003	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01099	hp2	a0001	c0001	t0005	g0037	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01106	hp1	a0001	c0001	t0005	g0005	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01106	hp2	a0003	c0003	t0003	g0014	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01109	hp1	a0001	c0002	t0003	g0003	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01109	hp2	a0001	c0002	t0004	g0010	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01167	hp1	a0003	c0003	t0003	g0014	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01167	hp2	a0001	c0002	t0004	g0004	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01168	hp1	a0001	c0001	t0002	g0002	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01168	hp2	a0001	c0002	t0003	g0003	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01169	hp1	a0001	c0001	t0002	g0002	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01169	hp2	a0003	c0003	t0004	g0013	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01175	hp1	a0001	c0001	t0002	g0002	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01192	hp1	a0001	c0002	t0001	g0006	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01192	hp2	a0001	c0001	t0002	g0002	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01243	hp1	a0004	c0005	t0007	g0066	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01243	hp2	a0001	c0001	t0002	g0002	AMR	PUR	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01255	hp2	a0001	c0002	t0003	g0003	AMR	CLM	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01257	hp1	a0001	c0002	t0004	g0004	AMR	CLM	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01257	hp2	a0001	c0001	t0001	g0012	AMR	CLM	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01258	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01258	hp2	a0001	c0002	t0004	g0004	AMR	CLM	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01261	hp1	a0001	c0001	t0001	g0016	AMR	CLM	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01261	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01346	hp1	a0001	c0001	t0002	g0002	AMR	CLM	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01346	hp2	a0001	c0008	t0010	g0024	AMR	CLM	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01361	hp2	a0001	c0002	t0003	g0003	AMR	CLM	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01433	hp2	a0001	c0001	t0002	g0002	AMR	CLM	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01496	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01496	hp2	a0001	c0001	t0001	g0016	AMR	CLM	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01515	hp2	a0001	c0001	t0001	g0001	EUR	IBS	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01516	hp1	a0001	c0001	t0002	g0002	EUR	IBS	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01516	hp2	a0001	c0001	t0001	g0001	EUR	IBS	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01884	hp1	a0002	c0004	t0006	g0011	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01884	hp2	a0001	c0001	t0002	g0002	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01891	hp1	a0001	c0001	t0003	g0007	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01891	hp2	a0001	c0001	t0002	g0002	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01928	hp2	a0001	c0006	t0001	g0015	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01934	hp1	a0001	c0001	t0001	g0016	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01934	hp2	a0001	c0002	t0003	g0018	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01943	hp2	a0001	c0002	t0004	g0004	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01952	hp1	a0001	c0006	t0001	g0015	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01952	hp2	a0001	c0002	t0003	g0049	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01978	hp1	a0001	c0002	t0003	g0018	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01981	hp1	a0001	c0002	t0004	g0004	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG01993	hp2	a0001	c0006	t0001	g0015	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02015	hp2	a0001	c0002	t0004	g0004	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02027	hp1	a0001	c0001	t0005	g0005	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02027	hp2	a0001	c0001	t0005	g0005	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02040	hp2	a0001	c0002	t0004	g0004	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02055	hp1	a0001	c0002	t0003	g0003	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02055	hp2	a0002	c0004	t0006	g0028	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02056	hp1	a0001	c0002	t0003	g0003	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02056	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02071	hp1	a0001	c0002	t0003	g0003	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02071	hp2	a0001	c0002	t0004	g0004	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02074	hp2	a0001	c0002	t0003	g0018	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02080	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02080	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02083	hp2	a0001	c0002	t0004	g0004	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02129	hp1	a0001	c0001	t0012	g0044	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02129	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02145	hp1	a0004	c0005	t0009	g0067	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02145	hp2	a0001	c0001	t0002	g0002	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02148	hp1	a0001	c0001	t0002	g0002	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02148	hp2	a0001	c0002	t0003	g0003	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02165	hp2	a0001	c0001	t0002	g0002	EAS	CDX	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02257	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02257	hp2	a0001	c0002	t0004	g0004	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02258	hp1	a0001	c0001	t0002	g0002	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02258	hp2	a0001	c0002	t0003	g0003	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02280	hp1	a0001	c0001	t0001	g0036	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02280	hp2	a0001	c0001	t0003	g0007	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02293	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02293	hp2	a0001	c0001	t0002	g0002	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02300	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02300	hp2	a0001	c0001	t0002	g0002	AMR	PEL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02451	hp1	a0002	c0007	t0001	g0027	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02451	hp2	a0001	c0001	t0009	g0061	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02523	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02523	hp2	a0001	c0001	t0002	g0002	EAS	KHV	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02572	hp1	a0001	c0001	t0001	g0038	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02572	hp2	a0001	c0001	t0005	g0009	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02602	hp2	a0005	c0009	t0004	g0055	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02615	hp1	a0001	c0001	t0001	g0021	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02615	hp2	a0003	c0003	t0003	g0014	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02630	hp1	a0001	c0001	t0004	g0022	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02630	hp2	a0001	c0002	t0001	g0006	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02647	hp1	a0001	c0001	t0002	g0002	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02647	hp2	a0001	c0002	t0003	g0003	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02683	hp1	a0001	c0002	t0004	g0004	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02683	hp2	a0001	c0002	t0004	g0004	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02698	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02698	hp2	a0001	c0002	t0004	g0004	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02717	hp1	a0001	c0001	t0001	g0034	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02717	hp2	a0001	c0001	t0004	g0008	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02738	hp1	a0001	c0001	t0005	g0005	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02738	hp2	a0001	c0001	t0005	g0005	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02809	hp1	a0001	c0002	t0003	g0003	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02809	hp2	a0002	c0007	t0001	g0026	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02818	hp1	a0001	c0001	t0014	g0059	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02818	hp2	a0001	c0001	t0002	g0002	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02886	hp1	a0001	c0001	t0005	g0009	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02886	hp2	a0001	c0001	t0003	g0007	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02895	hp1	a0003	c0003	t0004	g0013	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02895	hp2	a0001	c0001	t0005	g0009	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02922	hp1	a0001	c0001	t0004	g0031	AFR	ESN	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02922	hp2	a0004	c0005	t0007	g0019	AFR	ESN	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02970	hp1	a0001	c0001	t0001	g0023	AFR	ESN	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02970	hp2	a0001	c0002	t0003	g0003	AFR	ESN	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02976	hp1	a0001	c0001	t0004	g0041	AFR	ESN	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02976	hp2	a0001	c0001	t0005	g0009	AFR	ESN	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03098	hp1	a0001	c0001	t0016	g0062	AFR	MSL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03098	hp2	a0001	c0001	t0002	g0002	AFR	MSL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03130	hp1	a0001	c0001	t0002	g0002	AFR	ESN	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03130	hp2	a0001	c0001	t0003	g0007	AFR	ESN	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03139	hp1	a0001	c0001	t0003	g0007	AFR	ESN	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03139	hp2	a0001	c0001	t0002	g0002	AFR	ESN	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03195	hp1	a0002	c0004	t0006	g0011	AFR	ESN	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03195	hp2	a0001	c0001	t0001	g0021	AFR	ESN	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03209	hp1	a0001	c0001	t0003	g0007	AFR	MSL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03209	hp2	a0001	c0001	t0002	g0065	AFR	MSL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03225	hp1	a0001	c0001	t0004	g0008	AFR	MSL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03225	hp2	a0003	c0003	t0004	g0013	AFR	MSL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03239	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03239	hp2	a0001	c0002	t0011	g0052	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03453	hp1	a0001	c0001	t0001	g0001	AFR	MSL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03453	hp2	a0001	c0001	t0003	g0007	AFR	MSL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03486	hp1	a0001	c0001	t0001	g0001	AFR	MSL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03486	hp2	a0001	c0001	t0002	g0002	AFR	MSL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03490	hp1	a0001	c0001	t0002	g0002	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03490	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03491	hp1	a0001	c0001	t0001	g0046	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03516	hp1	a0004	c0005	t0007	g0019	AFR	ESN	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03516	hp2	a0001	c0001	t0004	g0008	AFR	ESN	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03540	hp1	a0001	c0001	t0003	g0039	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03540	hp2	a0001	c0001	t0005	g0033	AFR	GWD	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03579	hp1	a0001	c0001	t0002	g0002	AFR	MSL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03579	hp2	a0001	c0001	t0002	g0002	AFR	MSL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03654	hp1	a0001	c0001	t0002	g0002	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03654	hp2	a0001	c0001	t0002	g0002	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03669	hp1	a0001	c0002	t0003	g0003	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03669	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03688	hp1	a0001	c0002	t0003	g0003	SAS	STU	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03688	hp2	a0001	c0001	t0002	g0002	SAS	STU	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03831	hp2	a0001	c0001	t0002	g0002	SAS	BEB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03834	hp2	a0001	c0002	t0004	g0004	SAS	BEB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03927	hp1	a0001	c0002	t0003	g0003	SAS	BEB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03927	hp2	a0001	c0002	t0003	g0003	SAS	BEB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03942	hp2	a0001	c0001	t0001	g0001	SAS	BEB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG04115	hp1	a0001	c0001	t0002	g0063	SAS	STU	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG04115	hp2	a0001	c0001	t0002	g0002	SAS	STU	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG04184	hp1	a0001	c0001	t0001	g0001	SAS	BEB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG04184	hp2	a0001	c0001	t0002	g0002	SAS	BEB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG04199	hp1	a0001	c0002	t0003	g0003	SAS	STU	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG04199	hp2	a0001	c0001	t0005	g0005	SAS	STU	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG04204	hp2	a0001	c0001	t0002	g0002	SAS	STU	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG04228	hp1	a0005	c0009	t0001	g0054	SAS	STU	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG04228	hp2	a0001	c0001	t0001	g0001	SAS	STU	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18522	hp1	a0001	c0001	t0001	g0023	AFR	YRI	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18522	hp2	a0001	c0001	t0015	g0064	AFR	YRI	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18612	hp1	a0001	c0002	t0001	g0006	EAS	CHB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18612	hp2	a0001	c0001	t0001	g0001	EAS	CHB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18747	hp2	a0001	c0001	t0001	g0001	EAS	CHB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18906	hp1	a0001	c0001	t0001	g0001	AFR	YRI	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18906	hp2	a0004	c0005	t0007	g0019	AFR	YRI	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18940	hp1	a0001	c0001	t0002	g0002	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18940	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18941	hp1	a0001	c0002	t0004	g0004	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18941	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18942	hp1	a0001	c0002	t0003	g0003	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18942	hp2	a0001	c0001	t0008	g0017	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18943	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18943	hp2	a0001	c0002	t0004	g0048	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18944	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18945	hp1	a0001	c0002	t0003	g0003	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18945	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18946	hp1	a0001	c0002	t0003	g0051	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18946	hp2	a0001	c0001	t0001	g0012	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18947	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18950	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18950	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18951	hp1	a0001	c0001	t0002	g0002	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18951	hp2	a0001	c0001	t0001	g0030	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18952	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18956	hp1	a0001	c0001	t0005	g0005	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18956	hp2	a0001	c0002	t0001	g0006	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18957	hp1	a0001	c0002	t0004	g0004	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18957	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18959	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18959	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18960	hp1	a0001	c0001	t0005	g0005	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18960	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18961	hp1	a0001	c0001	t0005	g0005	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18961	hp2	a0001	c0002	t0004	g0004	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18964	hp1	a0001	c0002	t0004	g0004	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18964	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18967	hp1	a0001	c0002	t0004	g0004	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18967	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18969	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18970	hp2	a0001	c0001	t0002	g0002	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18971	hp1	a0001	c0001	t0002	g0002	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18971	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18973	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18973	hp2	a0001	c0001	t0002	g0002	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18974	hp1	a0001	c0001	t0002	g0002	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18974	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18979	hp1	a0001	c0002	t0004	g0004	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18982	hp2	a0001	c0002	t0004	g0004	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18983	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18984	hp2	a0001	c0002	t0003	g0003	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18987	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18987	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18989	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18989	hp2	a0001	c0002	t0001	g0006	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18990	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18990	hp2	a0001	c0002	t0003	g0003	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18994	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18995	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18995	hp2	a0001	c0002	t0003	g0003	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18997	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18997	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18999	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18999	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19000	hp1	a0001	c0002	t0003	g0003	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19000	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19002	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19002	hp2	a0001	c0001	t0001	g0012	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19003	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19004	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19004	hp2	a0001	c0001	t0001	g0045	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19005	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19007	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19009	hp1	a0001	c0002	t0004	g0004	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19009	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19010	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19030	hp1	a0001	c0001	t0001	g0040	AFR	LWK	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19030	hp2	a0001	c0001	t0001	g0001	AFR	LWK	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19055	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19055	hp2	a0006	c0013	t0001	g0056	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19057	hp1	a0001	c0001	t0008	g0017	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19057	hp2	a0001	c0002	t0001	g0006	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19060	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19062	hp1	a0001	c0001	t0005	g0005	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19062	hp2	a0001	c0010	t0002	g0025	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19065	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19067	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19067	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19068	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19068	hp2	a0001	c0002	t0001	g0006	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19070	hp1	a0001	c0002	t0004	g0004	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19070	hp2	a0001	c0002	t0001	g0006	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19072	hp1	a0001	c0001	t0002	g0002	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19072	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19074	hp2	a0001	c0002	t0004	g0010	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19077	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19077	hp2	a0001	c0001	t0002	g0002	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19079	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19081	hp1	a0001	c0002	t0004	g0010	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19081	hp2	a0001	c0001	t0002	g0068	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19082	hp1	a0007	c0011	t0001	g0029	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19082	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19084	hp1	a0008	c0012	t0001	g0050	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19084	hp2	a0001	c0002	t0001	g0047	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19085	hp2	a0001	c0001	t0008	g0017	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19087	hp1	a0001	c0002	t0001	g0006	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19087	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19089	hp1	a0001	c0001	t0005	g0005	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19089	hp2	a0001	c0010	t0002	g0025	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19090	hp1	a0001	c0001	t0005	g0005	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19090	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19240	hp1	a0001	c0001	t0003	g0042	AFR	YRI	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA19240	hp2	a0001	c0001	t0004	g0008	AFR	YRI	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA20129	hp1	a0001	c0001	t0001	g0001	AFR	ASW	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA20129	hp2	a0001	c0001	t0003	g0007	AFR	ASW	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA20752	hp2	a0001	c0001	t0001	g0001	EUR	TSI	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA20805	hp1	a0001	c0001	t0002	g0058	EUR	TSI	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA20805	hp2	a0001	c0002	t0004	g0004	EUR	TSI	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA20905	hp1	a0001	c0001	t0002	g0002	SAS	GIH	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02109	hp1	a0002	c0004	t0006	g0011	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02109	hp2	a0001	c0001	t0007	g0060	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02486	hp1	a0001	c0001	t0003	g0007	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02486	hp2	a0001	c0001	t0003	g0032	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02559	hp1	a0001	c0001	t0009	g0057	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG02559	hp2	a0002	c0004	t0006	g0011	AFR	ACB	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03471	hp1	a0001	c0001	t0003	g0043	AFR	MSL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG03471	hp2	a0001	c0001	t0001	g0001	AFR	MSL	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG06807	hp1	a0001	c0001	t0004	g0020	AFR	USA	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
HG06807	hp2	a0001	c0001	t0004	g0020	AFR	USA	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18955	hp1	a0001	c0001	t0002	g0002	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA18955	hp2	a0001	c0001	t0005	g0005	EAS	JPT	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA20300	hp1	a0001	c0001	t0001	g0001	AFR	USA	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA20300	hp2	a0001	c0001	t0004	g0008	AFR	USA	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA21309	hp1	a0001	c0001	t0001	g0035	AFR	LWK	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
NA21309	hp2	a0001	c0001	t0004	g0022	AFR	LWK	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
homoSapiens_chm13v2	hp1	a0001	c0002	t0003	g0003	REF	REF	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	CHAD_chr17_50459496_50473880	CHAD	chr17	50459496	50473880

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr17:50465329	G G	A A	1	a0004 a0004	5	HG01243.hp1 HG02145.hp1 HG02922.hp2 others(2): Show HG01243.hp1 HG02145.hp1 HG02922.hp2 HG03516.hp1 NA18906.hp2	missense_variant	MODERATE	c.1049C>T c.1049C>T	p.Thr350Ile p.Thr350Ile	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	3/4	1116/1705	1049/1080	350/359	chr17	50465329
chr17:50465416	C C	A A	1	a0003 a0003	6	HG01106.hp2 HG01167.hp1 HG01169.hp2 others(3): Show HG01106.hp2 HG01167.hp1 HG01169.hp2 HG02615.hp2 HG02895.hp1 HG03225.hp2	missense_variant	MODERATE	c.962G>T c.962G>T	p.Arg321Leu p.Arg321Leu	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	3/4	1029/1705	962/1080	321/359	chr17	50465416
chr17:50465416	C C	T T	1	a0008 a0008	1	NA19084.hp1 NA19084.hp1	missense_variant	MODERATE	c.962G>A c.962G>A	p.Arg321His p.Arg321His	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	3/4	1029/1705	962/1080	321/359	chr17	50465416
chr17:50468158	C C	T T	1	a0007 a0007	1	NA19082.hp1 NA19082.hp1	missense_variant	MODERATE	c.656G>A c.656G>A	p.Arg219Gln p.Arg219Gln	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/4	723/1705	656/1080	219/359	chr17	50468158
chr17:50468159	G G	A A	1	a0005 a0005	2	HG02602.hp2 HG04228.hp1 HG02602.hp2 HG04228.hp1	missense_variant	MODERATE	c.655C>T c.655C>T	p.Arg219Trp p.Arg219Trp	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/4	722/1705	655/1080	219/359	chr17	50468159
chr17:50468565	C C	A A	1	a0006 a0006	1	NA19055.hp2 NA19055.hp2	missense_variant	MODERATE	c.249G>T c.249G>T	p.Gln83His p.Gln83His	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/4	316/1705	249/1080	83/359	chr17	50468565
chr17:50468741	G G	T T	1	a0002 a0002	7	HG01884.hp1 HG02055.hp2 HG02109.hp1 others(4): Show HG01884.hp1 HG02055.hp2 HG02109.hp1 HG02451.hp1 HG02559.hp2 HG02809.hp2 HG03195.hp1	missense_variant	MODERATE	c.73C>A c.73C>A	p.Gln25Lys p.Gln25Lys	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/4	140/1705	73/1080	25/359	chr17	50468741

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr17:50465433	C C	T T	1	a0001c0006 a0001c0006	3	HG01928.hp2 HG01952.hp1 HG01993.hp2 HG01928.hp2 HG01952.hp1 HG01993.hp2	synonymous_variant	LOW	c.945G>A c.945G>A	p.Leu315Leu p.Leu315Leu	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	3/4	1012/1705	945/1080	315/359	chr17	50465433
chr17:50465793	G G	A A	1	a0001c0008 a0001c0008	2	HG00741.hp1 HG01346.hp2 HG00741.hp1 HG01346.hp2	synonymous_variant	LOW	c.852C>T c.852C>T	p.Pro284Pro p.Pro284Pro	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	2/4	919/1705	852/1080	284/359	chr17	50465793
chr17:50468138	G G	A A	1	a0002c0004 a0002c0004	5	HG01884.hp1 HG02055.hp2 HG02109.hp1 others(2): Show HG01884.hp1 HG02055.hp2 HG02109.hp1 HG02559.hp2 HG03195.hp1	synonymous_variant	LOW	c.676C>T c.676C>T	p.Leu226Leu p.Leu226Leu	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/4	743/1705	676/1080	226/359	chr17	50468138
chr17:50468235	G G	A A	3	a0001c0002 a0005c0009 a0008c0012 a0001c0002 a0005c0009 a0008c0012	86	HG00099.hp1 HG00099.hp2 HG00280.hp2 others(83): Show HG00099.hp1 HG00099.hp2 HG00280.hp2 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00741.hp2 HG01070.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp2 HG01168.hp2 HG01192.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01361.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp2 HG01978.hp1 HG01981.hp1 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02083.hp2 HG02148.hp2 HG02257.hp2 HG02258.hp2 HG02602.hp2 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp2 HG02809.hp1 HG02970.hp2 HG03239.hp2 HG03669.hp1 HG03688.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18942.hp1 NA18943.hp2 NA18945.hp1 NA18946.hp1 NA18956.hp2 NA18957.hp1 NA18961.hp2 NA18964.hp1 NA18967.hp1 NA18979.hp1 NA18982.hp2 NA18984.hp2 NA18989.hp2 NA18990.hp2 NA18995.hp2 NA19000.hp1 NA19009.hp1 NA19057.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp2 NA19081.hp1 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	synonymous_variant	LOW	c.579C>T c.579C>T	p.Asp193Asp p.Asp193Asp	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/4	646/1705	579/1080	193/359	chr17	50468235
chr17:50468634	G G	A A	1	a0001c0010 a0001c0010	2	NA19062.hp2 NA19089.hp2 NA19062.hp2 NA19089.hp2	synonymous_variant	LOW	c.180C>T c.180C>T	p.Arg60Arg p.Arg60Arg	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/4	247/1705	180/1080	60/359	chr17	50468634

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr17:50464528	A A	G G	1	a0001c0001t0012 a0001c0001t0012	1	HG02129.hp1 HG02129.hp1	3_prime_UTR_variant	MODIFIER	c.526T>C c.526T>C	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	4/4	770	chr17	50464528
chr17:50464573	C C	T T	1	a0001c0002t0013 a0001c0002t0013	1	HG01074.hp1 HG01074.hp1	3_prime_UTR_variant	MODIFIER	c.481G>A c.481G>A	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	4/4	725	chr17	50464573
chr17:50464769	T T	TG TG	2	a0001c0001t0005 a0001c0008t0010 a0001c0001t0005 a0001c0008t0010	22	HG00741.hp1 HG01069.hp2 HG01099.hp2 others(19): Show HG00741.hp1 HG01069.hp2 HG01099.hp2 HG01106.hp1 HG01346.hp2 HG02027.hp1 HG02027.hp2 HG02572.hp2 HG02738.hp1 HG02738.hp2 HG02886.hp1 HG02895.hp2 HG02976.hp2 HG03540.hp2 HG04199.hp2 NA18955.hp2 NA18956.hp1 NA18960.hp1 NA18961.hp1 NA19062.hp1 NA19089.hp1 NA19090.hp1	3_prime_UTR_variant	MODIFIER	c.284dupC c.284dupC	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	4/4	528	chr17	50464769
chr17:50464769	T T	TGGG TGGG	6	a0001c0001t0004 a0001c0001t0009 a0001c0002t0004 others(3): Show a0001c0001t0004 a0001c0001t0009 a0001c0002t0004 a0003c0003t0004 a0004c0005t0009 a0005c0009t0004	53	HG00099.hp1 HG00099.hp2 HG00280.hp2 others(50): Show HG00099.hp1 HG00099.hp2 HG00280.hp2 HG00733.hp1 HG00741.hp2 HG01070.hp2 HG01074.hp2 HG01109.hp2 HG01167.hp2 HG01169.hp2 HG01257.hp1 HG01258.hp2 HG01943.hp2 HG01981.hp1 HG02015.hp2 HG02040.hp2 HG02071.hp2 HG02083.hp2 HG02145.hp1 HG02257.hp2 HG02451.hp2 HG02559.hp1 HG02602.hp2 HG02630.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp2 HG02717.hp2 HG02895.hp1 HG02922.hp1 HG02976.hp1 HG03225.hp1 HG03225.hp2 HG03516.hp2 HG03834.hp2 HG06807.hp1 HG06807.hp2 NA18941.hp1 NA18943.hp2 NA18957.hp1 NA18961.hp2 NA18964.hp1 NA18967.hp1 NA18979.hp1 NA18982.hp2 NA19009.hp1 NA19070.hp1 NA19074.hp2 NA19081.hp1 NA19240.hp2 NA20300.hp2 NA20805.hp2 NA21309.hp2	3_prime_UTR_variant	MODIFIER	c.282_284dupCCC c.282_284dupCCC	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	4/4	528	chr17	50464769
chr17:50464769	T T	TGGGG TGGGG	5	a0001c0001t0003 a0001c0001t0016 a0001c0002t0003 others(2): Show a0001c0001t0003 a0001c0001t0016 a0001c0002t0003 a0001c0002t0013 a0003c0003t0003	53	HG00639.hp2 HG00642.hp1 HG00735.hp1 others(50): Show HG00639.hp2 HG00642.hp1 HG00735.hp1 HG00735.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01106.hp2 HG01109.hp1 HG01167.hp1 HG01168.hp2 HG01255.hp2 HG01361.hp2 HG01891.hp1 HG01934.hp2 HG01952.hp2 HG01978.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp2 HG02148.hp2 HG02258.hp2 HG02280.hp2 HG02486.hp1 HG02486.hp2 HG02615.hp2 HG02647.hp2 HG02809.hp1 HG02886.hp2 HG02970.hp2 HG03098.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp1 HG03453.hp2 HG03471.hp1 HG03540.hp1 HG03669.hp1 HG03688.hp1 HG03927.hp1 HG03927.hp2 HG04199.hp1 NA18942.hp1 NA18945.hp1 NA18946.hp1 NA18984.hp2 NA18990.hp2 NA18995.hp2 NA19000.hp1 NA19240.hp1 NA20129.hp2 homoSapiens_chm13v2.hp1	3_prime_UTR_variant	MODIFIER	c.281_284dupCCCC c.281_284dupCCCC	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	4/4	528	chr17	50464769
chr17:50464771	G G	GT GT	2	a0001c0001t0014 a0002c0004t0006 a0001c0001t0014 a0002c0004t0006	6	HG01884.hp1 HG02055.hp2 HG02109.hp1 others(3): Show HG01884.hp1 HG02055.hp2 HG02109.hp1 HG02559.hp2 HG02818.hp1 HG03195.hp1	3_prime_UTR_variant	MODIFIER	c.282_283insA c.282_283insA	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	4/4	526	chr17	50464771
chr17:50464777	G G	T T	1	a0001c0001t0008 a0001c0001t0008	3	NA18942.hp2 NA19057.hp1 NA19085.hp2 NA18942.hp2 NA19057.hp1 NA19085.hp2	3_prime_UTR_variant	MODIFIER	c.277C>A c.277C>A	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	4/4	521	chr17	50464777
chr17:50464778	G G	GT GT	3	a0001c0001t0002 a0001c0002t0011 a0001c0010t0002 a0001c0001t0002 a0001c0002t0011 a0001c0010t0002	55	HG00423.hp1 HG00438.hp2 HG00642.hp2 others(52): Show HG00423.hp1 HG00438.hp2 HG00642.hp2 HG00738.hp1 HG01070.hp1 HG01168.hp1 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01243.hp2 HG01346.hp1 HG01433.hp2 HG01516.hp1 HG01884.hp2 HG01891.hp2 HG02145.hp2 HG02148.hp1 HG02165.hp2 HG02258.hp1 HG02293.hp2 HG02300.hp2 HG02523.hp2 HG02647.hp1 HG02818.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03209.hp2 HG03239.hp2 HG03486.hp2 HG03490.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03688.hp2 HG03831.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04204.hp2 NA18940.hp1 NA18951.hp1 NA18955.hp1 NA18970.hp2 NA18971.hp1 NA18973.hp2 NA18974.hp1 NA19062.hp2 NA19072.hp1 NA19077.hp2 NA19081.hp2 NA19089.hp2 NA20805.hp1 NA20905.hp1	3_prime_UTR_variant	MODIFIER	c.275_276insA c.275_276insA	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	4/4	519	chr17	50464778
chr17:50464778	G G	T T	2	a0001c0001t0014 a0001c0001t0015 a0001c0001t0014 a0001c0001t0015	2	HG02818.hp1 NA18522.hp2 HG02818.hp1 NA18522.hp2	3_prime_UTR_variant	MODIFIER	c.276C>A c.276C>A	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	4/4	520	chr17	50464778
chr17:50468871	G G	C C	10	a0001c0001t0002 a0001c0001t0007 a0001c0001t0009 others(7): Show a0001c0001t0002 a0001c0001t0007 a0001c0001t0009 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0008t0010 a0001c0010t0002 a0004c0005t0007 a0004c0005t0009	67	HG00423.hp1 HG00438.hp2 HG00642.hp2 others(64): Show HG00423.hp1 HG00438.hp2 HG00642.hp2 HG00738.hp1 HG00741.hp1 HG01070.hp1 HG01168.hp1 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01346.hp1 HG01346.hp2 HG01433.hp2 HG01516.hp1 HG01884.hp2 HG01891.hp2 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02165.hp2 HG02258.hp1 HG02293.hp2 HG02300.hp2 HG02451.hp2 HG02523.hp2 HG02559.hp1 HG02647.hp1 HG02818.hp1 HG02818.hp2 HG02922.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03209.hp2 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03688.hp2 HG03831.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04204.hp2 NA18522.hp2 NA18906.hp2 NA18940.hp1 NA18951.hp1 NA18955.hp1 NA18970.hp2 NA18971.hp1 NA18973.hp2 NA18974.hp1 NA19062.hp2 NA19072.hp1 NA19077.hp2 NA19081.hp2 NA19089.hp2 NA20805.hp1 NA20905.hp1	5_prime_UTR_variant	MODIFIER	c.-58C>G c.-58C>G	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/4	58	chr17	50468871

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr17:50465211	C C	G G	53	a0001c0001t0001g0021 a0001c0001t0001g0034 a0001c0001t0001g0035 others(50): Show a0001c0001t0001g0021 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0040 a0001c0001t0002g0002 a0001c0001t0002g0058 a0001c0001t0002g0063 a0001c0001t0002g0065 a0001c0001t0003g0007 a0001c0001t0003g0032 a0001c0001t0003g0039 a0001c0001t0003g0042 a0001c0001t0003g0043 a0001c0001t0004g0008 a0001c0001t0004g0020 a0001c0001t0004g0022 a0001c0001t0004g0031 a0001c0001t0004g0041 a0001c0001t0005g0009 a0001c0001t0005g0033 a0001c0001t0005g0037 a0001c0001t0007g0060 a0001c0001t0009g0057 a0001c0001t0009g0061 a0001c0001t0014g0059 a0001c0001t0015g0064 a0001c0001t0016g0062 a0001c0002t0001g0006 a0001c0002t0001g0047 a0001c0002t0003g0003 a0001c0002t0003g0018 a0001c0002t0003g0049 a0001c0002t0003g0051 a0001c0002t0004g0004 a0001c0002t0004g0010 a0001c0002t0004g0048 a0001c0002t0011g0052 a0001c0002t0013g0053 a0001c0008t0010g0024 a0001c0010t0002g0025 a0002c0004t0006g0011 a0002c0004t0006g0028 a0002c0007t0001g0026 a0002c0007t0001g0027 a0003c0003t0003g0014 a0003c0003t0004g0013 a0004c0005t0007g0019 a0004c0005t0007g0066 a0004c0005t0009g0067 a0005c0009t0001g0054 a0005c0009t0004g0055 a0008c0012t0001g0050	202	HG00099.hp1 HG00099.hp2 HG00280.hp2 others(199): Show HG00099.hp1 HG00099.hp2 HG00280.hp2 HG00423.hp1 HG00438.hp2 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp2 HG01433.hp2 HG01516.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp2 HG01978.hp1 HG01981.hp1 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03688.hp1 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp1 NA18906.hp2 NA18940.hp1 NA18941.hp1 NA18942.hp1 NA18943.hp2 NA18945.hp1 NA18946.hp1 NA18951.hp1 NA18955.hp1 NA18956.hp2 NA18957.hp1 NA18961.hp2 NA18964.hp1 NA18967.hp1 NA18970.hp2 NA18971.hp1 NA18973.hp2 NA18974.hp1 NA18979.hp1 NA18982.hp2 NA18984.hp2 NA18989.hp2 NA18990.hp2 NA18995.hp2 NA19000.hp1 NA19009.hp1 NA19030.hp1 NA19057.hp2 NA19062.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp1 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA19089.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.4+83G>C c.4+83G>C	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	3/3	chr17	50465211
chr17:50465233	C C	G G	1	a0001c0002t0003g0051 a0001c0002t0003g0051	1	NA18946.hp1 NA18946.hp1	intron_variant	MODIFIER	c.4+61G>C c.4+61G>C	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	3/3	chr17	50465233
chr17:50465285	G G	A A	1	a0001c0001t0001g0045 a0001c0001t0001g0045	1	NA19004.hp2 NA19004.hp2	intron_variant	MODIFIER	c.4+9C>T c.4+9C>T	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	3/3	chr17	50465285
chr17:50465508	A A	G G	1	a0001c0001t0001g0035 a0001c0001t0001g0035	1	NA21309.hp1 NA21309.hp1	intron_variant	MODIFIER	c.939-69T>C c.939-69T>C	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	2/3	chr17	50465508
chr17:50465529	C C	T T	1	a0002c0007t0001g0026 a0002c0007t0001g0026	1	HG02809.hp2 HG02809.hp2	intron_variant	MODIFIER	c.939-90G>A c.939-90G>A	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	2/3	chr17	50465529
chr17:50465873	GGGGAGCA others(4): Show GGGGAGCAAGGT	G G	1	a0001c0001t0002g0063 a0001c0001t0002g0063	1	HG04115.hp1 HG04115.hp1	splice_region_variant&intron_variant	LOW	c.775-14_775-4delACC others(8): Show c.775-14_775-4delACCTTGCTCCC	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50465873
chr17:50466030	A A	C C	14	a0001c0002t0001g0006 a0001c0002t0001g0047 a0001c0002t0003g0003 others(11): Show a0001c0002t0001g0006 a0001c0002t0001g0047 a0001c0002t0003g0003 a0001c0002t0003g0018 a0001c0002t0003g0049 a0001c0002t0003g0051 a0001c0002t0004g0004 a0001c0002t0004g0010 a0001c0002t0004g0048 a0001c0002t0011g0052 a0001c0002t0013g0053 a0005c0009t0001g0054 a0005c0009t0004g0055 a0008c0012t0001g0050	86	HG00099.hp1 HG00099.hp2 HG00280.hp2 others(83): Show HG00099.hp1 HG00099.hp2 HG00280.hp2 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00741.hp2 HG01070.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp2 HG01168.hp2 HG01192.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01361.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp2 HG01978.hp1 HG01981.hp1 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02083.hp2 HG02148.hp2 HG02257.hp2 HG02258.hp2 HG02602.hp2 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp2 HG02809.hp1 HG02970.hp2 HG03239.hp2 HG03669.hp1 HG03688.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18942.hp1 NA18943.hp2 NA18945.hp1 NA18946.hp1 NA18956.hp2 NA18957.hp1 NA18961.hp2 NA18964.hp1 NA18967.hp1 NA18979.hp1 NA18982.hp2 NA18984.hp2 NA18989.hp2 NA18990.hp2 NA18995.hp2 NA19000.hp1 NA19009.hp1 NA19057.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp2 NA19081.hp1 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.775-160T>G c.775-160T>G	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50466030
chr17:50466073	CT CT	C C	22	a0001c0001t0001g0021 a0001c0001t0002g0065 a0001c0001t0003g0032 others(19): Show a0001c0001t0001g0021 a0001c0001t0002g0065 a0001c0001t0003g0032 a0001c0001t0003g0039 a0001c0001t0004g0022 a0001c0001t0004g0031 a0001c0001t0005g0009 a0001c0001t0005g0033 a0001c0001t0015g0064 a0001c0002t0001g0006 a0001c0002t0003g0003 a0001c0002t0003g0018 a0001c0002t0003g0051 a0001c0002t0004g0004 a0001c0002t0004g0010 a0001c0002t0011g0052 a0001c0002t0013g0053 a0003c0003t0003g0014 a0003c0003t0004g0013 a0005c0009t0001g0054 a0005c0009t0004g0055 a0008c0012t0001g0050	104	HG00099.hp1 HG00099.hp2 HG00280.hp2 others(101): Show HG00099.hp1 HG00099.hp2 HG00280.hp2 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00741.hp2 HG01069.hp2 HG01070.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp2 HG01192.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01361.hp2 HG01934.hp2 HG01943.hp2 HG01978.hp1 HG01981.hp1 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02083.hp2 HG02148.hp2 HG02257.hp2 HG02258.hp2 HG02486.hp2 HG02572.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp2 HG02809.hp1 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02922.hp1 HG02970.hp2 HG02976.hp2 HG03195.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp2 HG03540.hp1 HG03540.hp2 HG03669.hp1 HG03688.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04199.hp1 HG04228.hp1 NA18522.hp2 NA18612.hp1 NA18941.hp1 NA18942.hp1 NA18945.hp1 NA18946.hp1 NA18956.hp2 NA18957.hp1 NA18961.hp2 NA18964.hp1 NA18967.hp1 NA18979.hp1 NA18982.hp2 NA18984.hp2 NA18989.hp2 NA18990.hp2 NA18995.hp2 NA19000.hp1 NA19009.hp1 NA19057.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp2 NA19081.hp1 NA19084.hp1 NA19087.hp1 NA20805.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.775-204delA c.775-204delA	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50466073
chr17:50466076	T T	C C	1	a0001c0001t0001g0034 a0001c0001t0001g0034	1	HG02717.hp1 HG02717.hp1	intron_variant	MODIFIER	c.775-206A>G c.775-206A>G	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50466076
chr17:50466089	T T	C C	1	a0001c0002t0001g0047 a0001c0002t0001g0047	1	NA19084.hp2 NA19084.hp2	intron_variant	MODIFIER	c.775-219A>G c.775-219A>G	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50466089
chr17:50466091	C C	CT CT	8	a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0003g0007 others(5): Show a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0003g0007 a0001c0001t0003g0042 a0001c0001t0003g0043 a0001c0001t0004g0008 a0001c0001t0004g0041 a0001c0001t0009g0057	20	HG01891.hp1 HG02280.hp1 HG02280.hp2 others(17): Show HG01891.hp1 HG02280.hp1 HG02280.hp2 HG02486.hp1 HG02559.hp1 HG02717.hp1 HG02717.hp2 HG02886.hp2 HG02976.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp1 HG03225.hp1 HG03453.hp2 HG03471.hp1 HG03516.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2	intron_variant	MODIFIER	c.775-222dupA c.775-222dupA	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50466091
chr17:50466091	C C	T T	1	a0001c0002t0001g0047 a0001c0002t0001g0047	1	NA19084.hp2 NA19084.hp2	intron_variant	MODIFIER	c.775-221G>A c.775-221G>A	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50466091
chr17:50466146	G G	A A	1	a0002c0004t0006g0028 a0002c0004t0006g0028	1	HG02055.hp2 HG02055.hp2	intron_variant	MODIFIER	c.775-276C>T c.775-276C>T	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50466146
chr17:50466169	C C	A A	1	a0001c0001t0001g0046 a0001c0001t0001g0046	1	HG03491.hp1 HG03491.hp1	intron_variant	MODIFIER	c.775-299G>T c.775-299G>T	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50466169
chr17:50466180	G G	A A	2	a0001c0001t0001g0023 a0007c0011t0001g0029 a0001c0001t0001g0023 a0007c0011t0001g0029	3	HG02970.hp1 NA18522.hp1 NA19082.hp1 HG02970.hp1 NA18522.hp1 NA19082.hp1	intron_variant	MODIFIER	c.775-310C>T c.775-310C>T	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50466180
chr17:50466258	T T	C C	54	a0001c0001t0001g0021 a0001c0001t0001g0034 a0001c0001t0001g0036 others(51): Show a0001c0001t0001g0021 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0038 a0001c0001t0001g0040 a0001c0001t0002g0002 a0001c0001t0002g0058 a0001c0001t0002g0063 a0001c0001t0002g0065 a0001c0001t0002g0068 a0001c0001t0003g0007 a0001c0001t0003g0032 a0001c0001t0003g0039 a0001c0001t0003g0042 a0001c0001t0003g0043 a0001c0001t0004g0008 a0001c0001t0004g0020 a0001c0001t0004g0022 a0001c0001t0004g0031 a0001c0001t0004g0041 a0001c0001t0005g0009 a0001c0001t0005g0033 a0001c0001t0005g0037 a0001c0001t0007g0060 a0001c0001t0009g0057 a0001c0001t0009g0061 a0001c0001t0014g0059 a0001c0001t0015g0064 a0001c0001t0016g0062 a0001c0002t0001g0006 a0001c0002t0001g0047 a0001c0002t0003g0003 a0001c0002t0003g0018 a0001c0002t0003g0049 a0001c0002t0003g0051 a0001c0002t0004g0004 a0001c0002t0004g0010 a0001c0002t0004g0048 a0001c0002t0011g0052 a0001c0002t0013g0053 a0001c0008t0010g0024 a0001c0010t0002g0025 a0002c0004t0006g0011 a0002c0004t0006g0028 a0002c0007t0001g0026 a0002c0007t0001g0027 a0003c0003t0003g0014 a0003c0003t0004g0013 a0004c0005t0007g0019 a0004c0005t0007g0066 a0004c0005t0009g0067 a0005c0009t0001g0054 a0005c0009t0004g0055 a0008c0012t0001g0050	203	HG00099.hp1 HG00099.hp2 HG00280.hp2 others(200): Show HG00099.hp1 HG00099.hp2 HG00280.hp2 HG00423.hp1 HG00438.hp2 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp2 HG01433.hp2 HG01516.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp2 HG01978.hp1 HG01981.hp1 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03688.hp1 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp1 NA18906.hp2 NA18940.hp1 NA18941.hp1 NA18942.hp1 NA18943.hp2 NA18945.hp1 NA18946.hp1 NA18951.hp1 NA18955.hp1 NA18956.hp2 NA18957.hp1 NA18961.hp2 NA18964.hp1 NA18967.hp1 NA18970.hp2 NA18971.hp1 NA18973.hp2 NA18974.hp1 NA18979.hp1 NA18982.hp2 NA18984.hp2 NA18989.hp2 NA18990.hp2 NA18995.hp2 NA19000.hp1 NA19009.hp1 NA19030.hp1 NA19057.hp2 NA19062.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp1 NA19081.hp2 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA19089.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.775-388A>G c.775-388A>G	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50466258
chr17:50466263	A A	AT AT	14	a0001c0002t0001g0006 a0001c0002t0001g0047 a0001c0002t0003g0003 others(11): Show a0001c0002t0001g0006 a0001c0002t0001g0047 a0001c0002t0003g0003 a0001c0002t0003g0018 a0001c0002t0003g0049 a0001c0002t0003g0051 a0001c0002t0004g0004 a0001c0002t0004g0010 a0001c0002t0004g0048 a0001c0002t0011g0052 a0001c0002t0013g0053 a0005c0009t0001g0054 a0005c0009t0004g0055 a0008c0012t0001g0050	86	HG00099.hp1 HG00099.hp2 HG00280.hp2 others(83): Show HG00099.hp1 HG00099.hp2 HG00280.hp2 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00741.hp2 HG01070.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp2 HG01168.hp2 HG01192.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01361.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp2 HG01978.hp1 HG01981.hp1 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02083.hp2 HG02148.hp2 HG02257.hp2 HG02258.hp2 HG02602.hp2 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp2 HG02809.hp1 HG02970.hp2 HG03239.hp2 HG03669.hp1 HG03688.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18941.hp1 NA18942.hp1 NA18943.hp2 NA18945.hp1 NA18946.hp1 NA18956.hp2 NA18957.hp1 NA18961.hp2 NA18964.hp1 NA18967.hp1 NA18979.hp1 NA18982.hp2 NA18984.hp2 NA18989.hp2 NA18990.hp2 NA18995.hp2 NA19000.hp1 NA19009.hp1 NA19057.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp2 NA19081.hp1 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.775-394dupA c.775-394dupA	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50466263
chr17:50466319	G G	C C	1	a0001c0001t0001g0035 a0001c0001t0001g0035	1	NA21309.hp1 NA21309.hp1	intron_variant	MODIFIER	c.775-449C>G c.775-449C>G	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50466319
chr17:50466418	G G	A A	1	a0001c0001t0001g0012 a0001c0001t0001g0012	4	HG00408.hp2 HG01257.hp2 NA18946.hp2 others(1): Show HG00408.hp2 HG01257.hp2 NA18946.hp2 NA19002.hp2	intron_variant	MODIFIER	c.775-548C>T c.775-548C>T	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50466418
chr17:50466618	G G	A A	4	a0002c0004t0006g0011 a0002c0004t0006g0028 a0002c0007t0001g0026 others(1): Show a0002c0004t0006g0011 a0002c0004t0006g0028 a0002c0007t0001g0026 a0002c0007t0001g0027	7	HG01884.hp1 HG02055.hp2 HG02109.hp1 others(4): Show HG01884.hp1 HG02055.hp2 HG02109.hp1 HG02451.hp1 HG02559.hp2 HG02809.hp2 HG03195.hp1	intron_variant	MODIFIER	c.775-748C>T c.775-748C>T	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50466618
chr17:50466696	G G	A A	1	a0001c0001t0001g0035 a0001c0001t0001g0035	1	NA21309.hp1 NA21309.hp1	intron_variant	MODIFIER	c.775-826C>T c.775-826C>T	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50466696
chr17:50466822	C C	T T	1	a0001c0001t0001g0035 a0001c0001t0001g0035	1	NA21309.hp1 NA21309.hp1	intron_variant	MODIFIER	c.775-952G>A c.775-952G>A	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50466822
chr17:50467004	C C	T T	2	a0001c0001t0002g0058 a0001c0001t0009g0057 a0001c0001t0002g0058 a0001c0001t0009g0057	2	HG02559.hp1 NA20805.hp1 HG02559.hp1 NA20805.hp1	intron_variant	MODIFIER	c.774+1036G>A c.774+1036G>A	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50467004
chr17:50467240	C C	T T	1	a0001c0001t0001g0034 a0001c0001t0001g0034	1	HG02717.hp1 HG02717.hp1	intron_variant	MODIFIER	c.774+800G>A c.774+800G>A	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50467240
chr17:50467335	C C	A A	1	a0001c0001t0001g0040 a0001c0001t0001g0040	1	NA19030.hp1 NA19030.hp1	intron_variant	MODIFIER	c.774+705G>T c.774+705G>T	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50467335
chr17:50467373	G G	A A	2	a0001c0001t0003g0042 a0001c0001t0004g0041 a0001c0001t0003g0042 a0001c0001t0004g0041	2	HG02976.hp1 NA19240.hp1 HG02976.hp1 NA19240.hp1	intron_variant	MODIFIER	c.774+667C>T c.774+667C>T	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50467373
chr17:50467556	C C	G G	1	a0001c0001t0005g0033 a0001c0001t0005g0033	1	HG03540.hp2 HG03540.hp2	intron_variant	MODIFIER	c.774+484G>C c.774+484G>C	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50467556
chr17:50467577	C C	T T	2	a0001c0001t0003g0032 a0001c0001t0004g0031 a0001c0001t0003g0032 a0001c0001t0004g0031	2	HG02486.hp2 HG02922.hp1 HG02486.hp2 HG02922.hp1	intron_variant	MODIFIER	c.774+463G>A c.774+463G>A	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50467577
chr17:50467639	A A	G G	2	a0001c0001t0001g0016 a0001c0006t0001g0015 a0001c0001t0001g0016 a0001c0006t0001g0015	6	HG01261.hp1 HG01496.hp2 HG01928.hp2 others(3): Show HG01261.hp1 HG01496.hp2 HG01928.hp2 HG01934.hp1 HG01952.hp1 HG01993.hp2	intron_variant	MODIFIER	c.774+401T>C c.774+401T>C	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50467639
chr17:50467682	C C	T T	4	a0001c0002t0003g0018 a0001c0002t0004g0010 a0005c0009t0001g0054 others(1): Show a0001c0002t0003g0018 a0001c0002t0004g0010 a0005c0009t0001g0054 a0005c0009t0004g0055	10	HG00280.hp2 HG00733.hp1 HG01109.hp2 others(7): Show HG00280.hp2 HG00733.hp1 HG01109.hp2 HG01934.hp2 HG01978.hp1 HG02074.hp2 HG02602.hp2 HG04228.hp1 NA19074.hp2 NA19081.hp1	intron_variant	MODIFIER	c.774+358G>A c.774+358G>A	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50467682
chr17:50467782	T T	A A	1	a0001c0001t0003g0043 a0001c0001t0003g0043	1	HG03471.hp1 HG03471.hp1	intron_variant	MODIFIER	c.774+258A>T c.774+258A>T	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50467782
chr17:50467885	G G	A A	2	a0004c0005t0007g0066 a0004c0005t0009g0067 a0004c0005t0007g0066 a0004c0005t0009g0067	2	HG01243.hp1 HG02145.hp1 HG01243.hp1 HG02145.hp1	intron_variant	MODIFIER	c.774+155C>T c.774+155C>T	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50467885
chr17:50467887	C C	T T	54	a0001c0001t0001g0021 a0001c0001t0001g0034 a0001c0001t0001g0035 others(51): Show a0001c0001t0001g0021 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0038 a0001c0001t0001g0040 a0001c0001t0002g0002 a0001c0001t0002g0058 a0001c0001t0002g0063 a0001c0001t0002g0065 a0001c0001t0003g0007 a0001c0001t0003g0032 a0001c0001t0003g0039 a0001c0001t0003g0042 a0001c0001t0003g0043 a0001c0001t0004g0008 a0001c0001t0004g0020 a0001c0001t0004g0022 a0001c0001t0004g0031 a0001c0001t0004g0041 a0001c0001t0005g0009 a0001c0001t0005g0033 a0001c0001t0005g0037 a0001c0001t0007g0060 a0001c0001t0009g0057 a0001c0001t0009g0061 a0001c0001t0014g0059 a0001c0001t0015g0064 a0001c0001t0016g0062 a0001c0002t0001g0006 a0001c0002t0001g0047 a0001c0002t0003g0003 a0001c0002t0003g0018 a0001c0002t0003g0049 a0001c0002t0003g0051 a0001c0002t0004g0004 a0001c0002t0004g0010 a0001c0002t0004g0048 a0001c0002t0011g0052 a0001c0002t0013g0053 a0001c0008t0010g0024 a0001c0010t0002g0025 a0002c0004t0006g0011 a0002c0004t0006g0028 a0002c0007t0001g0026 a0002c0007t0001g0027 a0003c0003t0003g0014 a0003c0003t0004g0013 a0004c0005t0007g0019 a0004c0005t0007g0066 a0004c0005t0009g0067 a0005c0009t0001g0054 a0005c0009t0004g0055 a0008c0012t0001g0050	203	HG00099.hp1 HG00099.hp2 HG00280.hp2 others(200): Show HG00099.hp1 HG00099.hp2 HG00280.hp2 HG00423.hp1 HG00438.hp2 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp2 HG01433.hp2 HG01516.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp2 HG01978.hp1 HG01981.hp1 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03688.hp1 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04199.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp1 NA18906.hp2 NA18940.hp1 NA18941.hp1 NA18942.hp1 NA18943.hp2 NA18945.hp1 NA18946.hp1 NA18951.hp1 NA18955.hp1 NA18956.hp2 NA18957.hp1 NA18961.hp2 NA18964.hp1 NA18967.hp1 NA18970.hp2 NA18971.hp1 NA18973.hp2 NA18974.hp1 NA18979.hp1 NA18982.hp2 NA18984.hp2 NA18989.hp2 NA18990.hp2 NA18995.hp2 NA19000.hp1 NA19009.hp1 NA19030.hp1 NA19057.hp2 NA19062.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp1 NA19074.hp2 NA19077.hp2 NA19081.hp1 NA19084.hp1 NA19084.hp2 NA19087.hp1 NA19089.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.774+153G>A c.774+153G>A	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50467887
chr17:50467951	C C	T T	1	a0001c0001t0001g0030 a0001c0001t0001g0030	1	NA18951.hp2 NA18951.hp2	intron_variant	MODIFIER	c.774+89G>A c.774+89G>A	CHAD	ENSG00000136457.10	transcript	ENST00000508540.6	protein_coding	1/3	chr17	50467951

Search by Genic region

Search

🧬 JoGo Online Haplotype Explorer CHAD_chr17_50459496_50473880

JoGo Local Haplotype Explorer (on iGV) CHAD_chr17_50459496_50473880

Translation Multiple Alignment View

ACTG-Haplotype Mutation Positions 3D Viewer

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 8)

CCoding Level Haplotype Info (Total: 13)

TTranscript Level Haplotype Info (Total: 16)

GGenebody Level Haplotype Info (Total: 68)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 13)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 31)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 68)

Haplotype Details by Sample (Haploid Level) (Total: 386)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 7)

CCoding Level Variants (Synonymous Mutations) (Total: 5)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 10)

GGenebody Level Haplotype Variants (Intron) (Total: 34)

External Link

Annotation (Repeats)

Annotation (SNP Array)