Search by Genic region
Multiple Alignments (by aa haplotype frequency)
Multiple Alignments (by aa haplotype similarity)
| Item | Value |
|---|---|
| geneid | 1280 |
| ensemblid | ENSG00000139219.19 |
| hgncid | 2200 |
| symbol | COL2A1 |
| name | collagen type II alpha 1 chain |
| refseq_nuc | NM_001844.5 |
| refseq_prot | NP_001835.3 |
| ensembl_nuc | ENST00000380518.8 |
| ensembl_prot | ENSP00000369889.3 |
| mane_status | MANE Select |
| chr | chr12 |
| start | 47972967 |
| end | 48004476 |
| strand | - |
| ver | v1.2 |
| region | chr12:47972967-48004476 |
| region5000 | chr12:47967967-48009476 |
| regionname0 | COL2A1_chr12_47972967_48004476 |
| regionname5000 | COL2A1_chr12_47967967_48009476 |
| ahapid | grch38/chm13v2 | alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001 | 0/0 | 1487 | 225 | 59 | 42 | 84 | 10 | 30 | 65 | COL2A1_chr12_47967967_48009476 | COL2A1 | MIRLG others(1482): Show |
chr12 | 47967967 | 48009476 |
| a0002 | 0/1 | 1487 | 74 | 0 | 13 | 54 | 2 | 4 | 42 | COL2A1_chr12_47967967_48009476 | COL2A1 | MIRLG others(1482): Show |
chr12 | 47967967 | 48009476 |
| a0003 | 1/0 | 1487 | 65 | 33 | 12 | 14 | 1 | 4 | 12 | COL2A1_chr12_47967967_48009476 | COL2A1 | MIRLG others(1482): Show |
chr12 | 47967967 | 48009476 |
| a0004 | 0/0 | 1487 | 30 | 0 | 1 | 24 | 0 | 5 | 15 | COL2A1_chr12_47967967_48009476 | COL2A1 | MIRLG others(1482): Show |
chr12 | 47967967 | 48009476 |
| a0005 | 0/0 | 1487 | 7 | 1 | 6 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | MIRLG others(1482): Show |
chr12 | 47967967 | 48009476 |
| a0006 | 0/0 | 1487 | 2 | 0 | 0 | 0 | 1 | 1 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | MIRLG others(1482): Show |
chr12 | 47967967 | 48009476 |
| a0007 | 0/0 | 1487 | 2 | 0 | 0 | 2 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | MIRLG others(1482): Show |
chr12 | 47967967 | 48009476 |
| a0008 | 0/0 | 1487 | 2 | 0 | 0 | 2 | 0 | 0 | 2 | COL2A1_chr12_47967967_48009476 | COL2A1 | MIRLG others(1482): Show |
chr12 | 47967967 | 48009476 |
| a0009 | 0/0 | 1487 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | MIRLG others(1482): Show |
chr12 | 47967967 | 48009476 |
| a0010 | 0/0 | 1487 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | MIRLG others(1482): Show |
chr12 | 47967967 | 48009476 |
| a0011 | 0/0 | 1487 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | MIRLG others(1482): Show |
chr12 | 47967967 | 48009476 |
| a0012 | 0/0 | 1487 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | MIRLG others(1482): Show |
chr12 | 47967967 | 48009476 |
| a0013 | 0/0 | 1487 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | MIRLG others(1482): Show |
chr12 | 47967967 | 48009476 |
| a0014 | 0/0 | 1483 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | MIRLG others(1478): Show |
chr12 | 47967967 | 48009476 |
| a0015 | 0/0 | 1487 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | MIRLG others(1482): Show |
chr12 | 47967967 | 48009476 |
| achapid | grch38/chm13v2 | alen | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | aseq | cseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0002 | 0/0 | 4461 | 70 | 4 | 16 | 34 | 4 | 12 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0001c0003 | 0/0 | 4461 | 50 | 22 | 12 | 6 | 2 | 8 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0001c0004 | 0/0 | 4461 | 47 | 6 | 9 | 19 | 3 | 10 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0001c0006 | 0/0 | 4461 | 23 | 0 | 0 | 23 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0001c0008 | 0/0 | 4461 | 11 | 10 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0001c0014 | 0/0 | 4461 | 5 | 4 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0001c0018 | 0/0 | 4461 | 4 | 4 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0001c0026 | 0/0 | 4461 | 2 | 2 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0001c0027 | 0/0 | 4461 | 2 | 2 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0001c0037 | 0/0 | 4461 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0001c0038 | 0/0 | 4461 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0001c0039 | 0/0 | 4461 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0001c0040 | 0/0 | 4461 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0001c0041 | 0/0 | 4461 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0001c0042 | 0/0 | 4461 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0001c0045 | 0/0 | 4461 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0001c0046 | 0/0 | 4461 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0001c0047 | 0/0 | 4461 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0001c0049 | 0/0 | 4461 | 1 | 0 | 0 | 0 | 1 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0001c0050 | 0/0 | 4461 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0002c0001 | 0/1 | 4461 | 72 | 0 | 13 | 52 | 2 | 4 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0002c0025 | 0/0 | 4461 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0003c0005 | 1/0 | 4461 | 26 | 12 | 10 | 1 | 0 | 2 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0003c0009 | 0/0 | 4461 | 10 | 6 | 1 | 3 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0003c0012 | 0/0 | 4461 | 6 | 3 | 1 | 0 | 0 | 2 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0003c0013 | 0/0 | 4461 | 6 | 0 | 0 | 6 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0003c0016 | 0/0 | 4461 | 4 | 2 | 0 | 1 | 1 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0003c0019 | 0/0 | 4461 | 3 | 3 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0003c0020 | 0/0 | 4461 | 3 | 0 | 0 | 3 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0003c0021 | 0/0 | 4461 | 2 | 2 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0003c0023 | 0/0 | 4461 | 2 | 2 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0003c0029 | 0/0 | 4461 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0003c0030 | 0/0 | 4461 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0003c0031 | 0/0 | 4461 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0004c0007 | 0/0 | 4461 | 13 | 0 | 1 | 8 | 0 | 4 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0004c0010 | 0/0 | 4461 | 7 | 0 | 0 | 7 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0004c0015 | 0/0 | 4461 | 5 | 0 | 0 | 4 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0004c0017 | 0/0 | 4461 | 4 | 0 | 0 | 4 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0004c0048 | 0/0 | 4461 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0005c0011 | 0/0 | 4461 | 7 | 1 | 6 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0006c0036 | 0/0 | 4461 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0006c0043 | 0/0 | 4461 | 1 | 0 | 0 | 0 | 1 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0007c0024 | 0/0 | 4461 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0008c0022 | 0/0 | 4461 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0009c0028 | 0/0 | 4461 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0010c0044 | 0/0 | 4461 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0011c0051 | 0/0 | 4461 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0012c0034 | 0/0 | 4461 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0013c0033 | 0/0 | 4461 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 | ||
| a0014c0032 | 0/0 | 4449 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4444): Show |
chr12 | 47967967 | 48009476 | ||
| a0015c0035 | 0/0 | 4461 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | ATGAT others(4456): Show |
chr12 | 47967967 | 48009476 |
| acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0002t0001 | 0/0 | 5059 | 69 | 3 | 16 | 34 | 4 | 12 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0002t0003 | 0/0 | 5059 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0003t0001 | 0/0 | 5059 | 43 | 16 | 12 | 6 | 1 | 8 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0003t0003 | 0/0 | 5059 | 3 | 3 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0003t0007 | 0/0 | 5059 | 3 | 3 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0003t0011 | 0/0 | 5059 | 1 | 0 | 0 | 0 | 1 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0004t0001 | 0/0 | 5059 | 47 | 6 | 9 | 19 | 3 | 10 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0006t0001 | 0/0 | 5059 | 22 | 0 | 0 | 22 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0006t0006 | 0/0 | 5059 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0008t0001 | 0/0 | 5059 | 11 | 10 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0014t0001 | 0/0 | 5059 | 5 | 4 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0018t0003 | 0/0 | 5059 | 4 | 4 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0026t0004 | 0/0 | 5059 | 2 | 2 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0027t0001 | 0/0 | 5059 | 2 | 2 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0037t0001 | 0/0 | 5059 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0038t0001 | 0/0 | 5059 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0039t0001 | 0/0 | 5059 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0040t0001 | 0/0 | 5059 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0041t0001 | 0/0 | 5059 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0042t0001 | 0/0 | 5059 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0045t0001 | 0/0 | 5059 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0046t0001 | 0/0 | 5059 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0047t0001 | 0/0 | 5059 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0049t0001 | 0/0 | 5059 | 1 | 0 | 0 | 0 | 1 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0001c0050t0001 | 0/0 | 5059 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0002c0001t0001 | 0/1 | 5059 | 9 | 0 | 0 | 4 | 2 | 2 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0002c0001t0002 | 0/0 | 5059 | 59 | 0 | 13 | 44 | 0 | 2 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0002c0001t0005 | 0/0 | 5059 | 3 | 0 | 0 | 3 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0002c0001t0010 | 0/0 | 5059 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0002c0025t0002 | 0/0 | 5059 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0003c0005t0001 | 0/0 | 5059 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0003c0005t0002 | 1/0 | 5059 | 23 | 10 | 10 | 0 | 0 | 2 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0003c0005t0009 | 0/0 | 5059 | 2 | 2 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0003c0009t0001 | 0/0 | 5059 | 3 | 0 | 0 | 3 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0003c0009t0002 | 0/0 | 5059 | 7 | 6 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0003c0012t0002 | 0/0 | 5059 | 6 | 3 | 1 | 0 | 0 | 2 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0003c0013t0001 | 0/0 | 5059 | 5 | 0 | 0 | 5 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0003c0013t0002 | 0/0 | 5059 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0003c0016t0001 | 0/0 | 5059 | 2 | 2 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0003c0016t0002 | 0/0 | 5059 | 2 | 0 | 0 | 1 | 1 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0003c0019t0001 | 0/0 | 5059 | 3 | 3 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0003c0020t0001 | 0/0 | 5059 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0003c0020t0002 | 0/0 | 5059 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0003c0021t0002 | 0/0 | 5059 | 2 | 2 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0003c0023t0002 | 0/0 | 5059 | 2 | 2 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0003c0029t0002 | 0/0 | 5059 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0003c0030t0002 | 0/0 | 5059 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0003c0031t0001 | 0/0 | 5059 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0004c0007t0001 | 0/0 | 5059 | 13 | 0 | 1 | 8 | 0 | 4 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0004c0010t0001 | 0/0 | 5059 | 7 | 0 | 0 | 7 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0004c0015t0001 | 0/0 | 5059 | 3 | 0 | 0 | 2 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0004c0015t0006 | 0/0 | 5059 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0004c0017t0001 | 0/0 | 5059 | 3 | 0 | 0 | 3 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0004c0017t0012 | 0/0 | 5059 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0004c0048t0001 | 0/0 | 5059 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0005c0011t0001 | 0/0 | 5059 | 7 | 1 | 6 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0006c0036t0004 | 0/0 | 5059 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0006c0043t0004 | 0/0 | 5059 | 1 | 0 | 0 | 0 | 1 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0007c0024t0002 | 0/0 | 5059 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0008c0022t0008 | 0/0 | 5059 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0009c0028t0002 | 0/0 | 5059 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0010c0044t0001 | 0/0 | 5059 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0011c0051t0001 | 0/0 | 5059 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0012c0034t0002 | 0/0 | 5059 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0013c0033t0002 | 0/0 | 5059 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| a0014c0032t0002 | 0/0 | 5047 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5042): Show |
chr12 | 47967967 | 48009476 |
| a0015c0035t0001 | 0/0 | 5059 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | GCAGA others(5054): Show |
chr12 | 47967967 | 48009476 |
| actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a0001c0002t0001g0002 | 0/0 | 15 | 1 | 4 | 8 | 0 | 2 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0005 | 0/0 | 7 | 0 | 2 | 3 | 2 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0018 | 0/0 | 3 | 0 | 0 | 0 | 0 | 3 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0019 | 0/0 | 3 | 0 | 3 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0020 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0038 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0039 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0040 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0054 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0140 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0141 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0145 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0147 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0148 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0149 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0150 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0153 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0154 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0155 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0156 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0158 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0160 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0161 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0163 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0164 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0165 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0166 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0167 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0168 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0169 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0170 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0171 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0173 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0174 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0175 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0179 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0180 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0224 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0001g0249 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0002t0003g0151 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0006 | 0/0 | 5 | 1 | 0 | 1 | 0 | 3 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0010 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0025 | 0/0 | 3 | 0 | 2 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0041 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0052 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0129 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0130 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0132 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0133 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0134 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0135 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0183 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0187 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0189 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0202 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0208 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0227 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0230 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0234 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0235 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0236 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0238 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0239 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0242 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0243 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0244 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0245 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0248 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0252 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0261 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0262 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0001g0266 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0003g0193 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0003g0194 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0003g0195 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0007g0021 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0003t0011g0241 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0011 | 0/0 | 4 | 0 | 2 | 0 | 0 | 2 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0012 | 0/0 | 4 | 0 | 1 | 3 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0022 | 0/0 | 3 | 0 | 2 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0023 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0045 | 0/0 | 2 | 0 | 1 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0047 | 0/0 | 2 | 0 | 1 | 0 | 1 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0048 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0050 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0051 | 0/0 | 2 | 0 | 0 | 0 | 2 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0055 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0056 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0136 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0199 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0209 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0212 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0215 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0217 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0218 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0222 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0225 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0226 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0229 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0233 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0240 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0250 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0251 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0254 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0255 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0256 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0004t0001g0265 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0006t0001g0003 | 0/0 | 14 | 0 | 0 | 14 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0006t0001g0042 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0006t0001g0044 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0006t0001g0138 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0006t0001g0198 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0006t0001g0205 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0006t0001g0207 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0006t0006g0206 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0008t0001g0009 | 0/0 | 4 | 4 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0008t0001g0186 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0008t0001g0188 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0008t0001g0197 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0008t0001g0200 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0008t0001g0201 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0008t0001g0203 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0008t0001g0221 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0014t0001g0043 | 0/0 | 2 | 1 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0014t0001g0190 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0014t0001g0219 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0014t0001g0220 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0018t0003g0017 | 0/0 | 3 | 3 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0018t0003g0144 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0026t0004g0231 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0026t0004g0232 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0027t0001g0184 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0027t0001g0228 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0037t0001g0142 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0038t0001g0196 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0039t0001g0246 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0040t0001g0211 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0041t0001g0185 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0042t0001g0182 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0045t0001g0131 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0046t0001g0191 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0047t0001g0259 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0049t0001g0213 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0001c0050t0001g0204 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0001g0016 | 0/1 | 3 | 0 | 0 | 0 | 0 | 2 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0001g0116 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0001g0117 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0001g0120 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0001g0121 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0001g0122 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0001g0123 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0001 | 0/0 | 26 | 0 | 4 | 22 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0004 | 0/0 | 11 | 0 | 3 | 8 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0015 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0062 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0068 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0071 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0074 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0077 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0079 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0082 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0085 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0088 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0090 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0091 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0094 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0096 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0102 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0104 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0106 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0107 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0108 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0002g0110 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0005g0013 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0001t0010g0089 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0002c0025t0002g0031 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0005t0001g0126 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0005t0002g0007 | 1/0 | 4 | 0 | 2 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0005t0002g0014 | 0/0 | 3 | 0 | 3 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0005t0002g0026 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0005t0002g0030 | 0/0 | 2 | 1 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0005t0002g0033 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0005t0002g0059 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0005t0002g0064 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0005t0002g0067 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0005t0002g0073 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0005t0002g0086 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0005t0002g0092 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0005t0002g0097 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0005t0002g0098 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0005t0002g0109 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0005t0002g0111 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0005t0009g0060 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0005t0009g0105 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0009t0001g0036 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0009t0001g0119 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0009t0002g0028 | 0/0 | 2 | 1 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0009t0002g0032 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0009t0002g0072 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0009t0002g0100 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0009t0002g0103 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0012t0002g0029 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0012t0002g0063 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0012t0002g0069 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0012t0002g0070 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0012t0002g0095 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0013t0001g0035 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0013t0001g0118 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0013t0001g0124 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0013t0001g0125 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0013t0002g0087 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0016t0001g0114 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0016t0001g0115 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0016t0002g0080 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0016t0002g0093 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0019t0001g0034 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0019t0001g0112 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0020t0001g0127 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0020t0001g0128 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0020t0002g0078 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0021t0002g0061 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0021t0002g0065 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0023t0002g0027 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0029t0002g0099 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0030t0002g0066 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0003c0031t0001g0113 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0007t0001g0024 | 0/0 | 3 | 0 | 0 | 3 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0007t0001g0053 | 0/0 | 2 | 0 | 0 | 0 | 0 | 2 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0007t0001g0139 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0007t0001g0143 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0007t0001g0210 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0007t0001g0216 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0007t0001g0237 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0007t0001g0247 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0007t0001g0253 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0007t0001g0263 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0010t0001g0037 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0010t0001g0049 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0010t0001g0159 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0010t0001g0162 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0010t0001g0223 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0015t0001g0046 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0015t0001g0257 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0015t0006g0258 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0015t0006g0264 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0017t0001g0137 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0017t0001g0146 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0017t0001g0172 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0017t0012g0176 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0004c0048t0001g0260 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0005c0011t0001g0008 | 0/0 | 4 | 0 | 4 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0005c0011t0001g0177 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0005c0011t0001g0178 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0005c0011t0001g0181 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0006c0036t0004g0157 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0006c0043t0004g0214 | 0/0 | 1 | 0 | 0 | 0 | 1 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0007c0024t0002g0076 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0007c0024t0002g0084 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0008c0022t0008g0075 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0008c0022t0008g0101 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0009c0028t0002g0057 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0010c0044t0001g0267 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0011c0051t0001g0192 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0012c0034t0002g0058 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0013c0033t0002g0083 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0014c0032t0002g0081 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| a0015c0035t0001g0152 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG00099 | hp1 | a0001 | c0003 | t0011 | g0241 | EUR | GBR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00099 | hp2 | a0001 | c0003 | t0001 | g0235 | EUR | GBR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00140 | hp1 | a0001 | c0002 | t0001 | g0005 | EUR | GBR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00140 | hp2 | a0001 | c0049 | t0001 | g0213 | EUR | GBR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00280 | hp1 | a0002 | c0001 | t0001 | g0120 | EUR | FIN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00280 | hp2 | a0006 | c0043 | t0004 | g0214 | EUR | FIN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00323 | hp1 | a0001 | c0002 | t0001 | g0173 | EUR | FIN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00323 | hp2 | a0003 | c0016 | t0002 | g0080 | EUR | FIN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00408 | hp1 | a0003 | c0005 | t0001 | g0126 | EAS | CHS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00408 | hp2 | a0004 | c0017 | t0001 | g0172 | EAS | CHS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00423 | hp1 | a0002 | c0001 | t0002 | g0001 | EAS | CHS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00423 | hp2 | a0001 | c0004 | t0001 | g0012 | EAS | CHS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00438 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | CHS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00438 | hp2 | a0002 | c0001 | t0002 | g0004 | EAS | CHS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00544 | hp1 | a0004 | c0048 | t0001 | g0260 | EAS | CHS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00544 | hp2 | a0002 | c0001 | t0002 | g0001 | EAS | CHS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00597 | hp1 | a0001 | c0002 | t0001 | g0170 | EAS | CHS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00597 | hp2 | a0002 | c0001 | t0002 | g0001 | EAS | CHS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00609 | hp1 | a0002 | c0001 | t0002 | g0082 | EAS | CHS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00609 | hp2 | a0001 | c0003 | t0001 | g0006 | EAS | CHS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00621 | hp1 | a0001 | c0006 | t0001 | g0003 | EAS | CHS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00621 | hp2 | a0004 | c0017 | t0012 | g0176 | EAS | CHS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00639 | hp1 | a0005 | c0011 | t0001 | g0008 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00639 | hp2 | a0001 | c0004 | t0001 | g0045 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00642 | hp1 | a0001 | c0045 | t0001 | g0131 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00642 | hp2 | a0001 | c0002 | t0001 | g0002 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00673 | hp1 | a0001 | c0002 | t0001 | g0054 | EAS | CHS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00673 | hp2 | a0002 | c0001 | t0001 | g0121 | EAS | CHS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00733 | hp1 | a0002 | c0001 | t0002 | g0001 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00733 | hp2 | a0005 | c0011 | t0001 | g0008 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00735 | hp1 | a0005 | c0011 | t0001 | g0008 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00735 | hp2 | a0002 | c0001 | t0002 | g0068 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00738 | hp1 | a0001 | c0003 | t0001 | g0238 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00738 | hp2 | a0001 | c0004 | t0001 | g0012 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00741 | hp1 | a0001 | c0041 | t0001 | g0185 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG00741 | hp2 | a0001 | c0002 | t0001 | g0145 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01069 | hp1 | a0001 | c0004 | t0001 | g0022 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01069 | hp2 | a0003 | c0005 | t0002 | g0033 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01070 | hp1 | a0001 | c0004 | t0001 | g0047 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01070 | hp2 | a0001 | c0002 | t0001 | g0038 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01071 | hp1 | a0003 | c0005 | t0002 | g0033 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01071 | hp2 | a0001 | c0002 | t0001 | g0038 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01074 | hp1 | a0001 | c0004 | t0001 | g0011 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01074 | hp2 | a0001 | c0003 | t0001 | g0052 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01081 | hp1 | a0005 | c0011 | t0001 | g0178 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01081 | hp2 | a0001 | c0003 | t0001 | g0052 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01099 | hp1 | a0003 | c0005 | t0002 | g0098 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01099 | hp2 | a0003 | c0005 | t0002 | g0007 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01106 | hp1 | a0001 | c0039 | t0001 | g0246 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01106 | hp2 | a0001 | c0002 | t0001 | g0002 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01109 | hp1 | a0003 | c0012 | t0002 | g0063 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01109 | hp2 | a0001 | c0003 | t0001 | g0129 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01167 | hp1 | a0003 | c0005 | t0002 | g0030 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01167 | hp2 | a0001 | c0014 | t0001 | g0043 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01168 | hp1 | a0005 | c0011 | t0001 | g0181 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01168 | hp2 | a0004 | c0007 | t0001 | g0237 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01175 | hp1 | a0001 | c0002 | t0001 | g0160 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01175 | hp2 | a0001 | c0003 | t0001 | g0242 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01192 | hp1 | a0001 | c0008 | t0001 | g0186 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01192 | hp2 | a0005 | c0011 | t0001 | g0008 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01243 | hp1 | a0001 | c0004 | t0001 | g0212 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01243 | hp2 | a0003 | c0005 | t0002 | g0007 | AMR | PUR | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01255 | hp1 | a0001 | c0002 | t0001 | g0171 | AMR | CLM | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01255 | hp2 | a0001 | c0002 | t0001 | g0147 | AMR | CLM | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01257 | hp1 | a0001 | c0004 | t0001 | g0022 | AMR | CLM | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01257 | hp2 | a0003 | c0005 | t0002 | g0014 | AMR | CLM | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01258 | hp1 | a0003 | c0005 | t0002 | g0014 | AMR | CLM | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01258 | hp2 | a0001 | c0004 | t0001 | g0011 | AMR | CLM | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01261 | hp1 | a0003 | c0005 | t0002 | g0014 | AMR | CLM | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01261 | hp2 | a0001 | c0003 | t0001 | g0132 | AMR | CLM | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01346 | hp1 | a0001 | c0003 | t0001 | g0234 | AMR | CLM | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01346 | hp2 | a0003 | c0009 | t0002 | g0028 | AMR | CLM | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01361 | hp1 | a0001 | c0004 | t0001 | g0240 | AMR | CLM | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01361 | hp2 | a0002 | c0001 | t0002 | g0062 | AMR | CLM | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01433 | hp1 | a0001 | c0002 | t0001 | g0165 | AMR | CLM | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01433 | hp2 | a0001 | c0002 | t0001 | g0002 | AMR | CLM | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01496 | hp1 | a0001 | c0003 | t0001 | g0025 | AMR | CLM | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01496 | hp2 | a0001 | c0002 | t0001 | g0005 | AMR | CLM | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01515 | hp1 | a0001 | c0002 | t0001 | g0005 | EUR | IBS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01515 | hp2 | a0001 | c0004 | t0001 | g0051 | EUR | IBS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01517 | hp1 | a0001 | c0004 | t0001 | g0047 | EUR | IBS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01517 | hp2 | a0001 | c0004 | t0001 | g0051 | EUR | IBS | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01884 | hp1 | a0001 | c0042 | t0001 | g0182 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01884 | hp2 | a0003 | c0031 | t0001 | g0113 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01891 | hp1 | a0003 | c0009 | t0002 | g0032 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01891 | hp2 | a0005 | c0011 | t0001 | g0177 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01928 | hp1 | a0002 | c0001 | t0002 | g0004 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01928 | hp2 | a0001 | c0003 | t0001 | g0252 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01934 | hp1 | a0002 | c0001 | t0002 | g0001 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01934 | hp2 | a0001 | c0002 | t0001 | g0019 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01943 | hp1 | a0002 | c0001 | t0002 | g0102 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01943 | hp2 | a0003 | c0005 | t0002 | g0073 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01952 | hp1 | a0001 | c0003 | t0001 | g0130 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01952 | hp2 | a0002 | c0001 | t0002 | g0004 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01975 | hp1 | a0002 | c0001 | t0002 | g0108 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01975 | hp2 | a0001 | c0002 | t0001 | g0019 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01978 | hp1 | a0001 | c0002 | t0001 | g0005 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01978 | hp2 | a0001 | c0003 | t0001 | g0133 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01993 | hp1 | a0002 | c0001 | t0002 | g0090 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG01993 | hp2 | a0001 | c0002 | t0001 | g0019 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02004 | hp1 | a0001 | c0003 | t0001 | g0025 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02004 | hp2 | a0002 | c0001 | t0002 | g0004 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02015 | hp1 | a0004 | c0017 | t0001 | g0146 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02015 | hp2 | a0007 | c0024 | t0002 | g0084 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02040 | hp1 | a0001 | c0006 | t0001 | g0138 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02040 | hp2 | a0001 | c0002 | t0001 | g0002 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02055 | hp1 | a0003 | c0009 | t0002 | g0072 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02055 | hp2 | a0003 | c0005 | t0009 | g0105 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02071 | hp1 | a0002 | c0001 | t0002 | g0004 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02071 | hp2 | a0001 | c0002 | t0001 | g0249 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02074 | hp1 | a0001 | c0006 | t0001 | g0198 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02074 | hp2 | a0001 | c0002 | t0001 | g0224 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02080 | hp1 | a0004 | c0017 | t0001 | g0137 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02080 | hp2 | a0002 | c0001 | t0002 | g0001 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02083 | hp1 | a0001 | c0002 | t0001 | g0158 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02083 | hp2 | a0004 | c0010 | t0001 | g0162 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02129 | hp1 | a0003 | c0013 | t0002 | g0087 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02129 | hp2 | a0004 | c0015 | t0001 | g0046 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02132 | hp1 | a0004 | c0015 | t0006 | g0258 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02132 | hp2 | a0001 | c0002 | t0001 | g0020 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02135 | hp1 | a0001 | c0004 | t0001 | g0012 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02135 | hp2 | a0002 | c0001 | t0002 | g0001 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02145 | hp1 | a0001 | c0046 | t0001 | g0191 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02145 | hp2 | a0001 | c0014 | t0001 | g0219 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02155 | hp1 | a0002 | c0001 | t0002 | g0015 | EAS | CDX | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02155 | hp2 | a0001 | c0002 | t0001 | g0167 | EAS | CDX | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02165 | hp1 | a0009 | c0028 | t0002 | g0057 | EAS | CDX | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02165 | hp2 | a0001 | c0002 | t0001 | g0040 | EAS | CDX | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02257 | hp1 | a0003 | c0016 | t0001 | g0115 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02257 | hp2 | a0001 | c0008 | t0001 | g0009 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02258 | hp1 | a0001 | c0026 | t0004 | g0231 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02258 | hp2 | a0003 | c0012 | t0002 | g0070 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02280 | hp1 | a0001 | c0003 | t0001 | g0010 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02280 | hp2 | a0003 | c0005 | t0002 | g0109 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02293 | hp1 | a0002 | c0001 | t0002 | g0091 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02293 | hp2 | a0002 | c0001 | t0002 | g0001 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02300 | hp1 | a0001 | c0002 | t0001 | g0002 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02300 | hp2 | a0002 | c0001 | t0002 | g0001 | AMR | PEL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02523 | hp1 | a0002 | c0001 | t0001 | g0116 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02523 | hp2 | a0001 | c0002 | t0001 | g0179 | EAS | KHV | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02572 | hp1 | a0003 | c0005 | t0002 | g0026 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02572 | hp2 | a0001 | c0008 | t0001 | g0009 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02602 | hp1 | a0001 | c0002 | t0001 | g0166 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02602 | hp2 | a0003 | c0012 | t0002 | g0029 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02615 | hp1 | a0001 | c0008 | t0001 | g0009 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02615 | hp2 | a0001 | c0003 | t0001 | g0236 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02622 | hp1 | a0001 | c0003 | t0001 | g0134 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02622 | hp2 | a0001 | c0008 | t0001 | g0221 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02630 | hp1 | a0001 | c0038 | t0001 | g0196 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02630 | hp2 | a0003 | c0005 | t0002 | g0092 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02647 | hp1 | a0003 | c0012 | t0002 | g0095 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02647 | hp2 | a0001 | c0004 | t0001 | g0050 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02683 | hp1 | a0001 | c0004 | t0001 | g0022 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02683 | hp2 | a0001 | c0003 | t0001 | g0244 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02698 | hp1 | a0001 | c0002 | t0001 | g0002 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02698 | hp2 | a0001 | c0004 | t0001 | g0233 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02717 | hp1 | a0003 | c0021 | t0002 | g0061 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02717 | hp2 | a0003 | c0009 | t0002 | g0032 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02723 | hp1 | a0001 | c0004 | t0001 | g0265 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02723 | hp2 | a0001 | c0004 | t0001 | g0229 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02735 | hp1 | a0006 | c0036 | t0004 | g0157 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02735 | hp2 | a0004 | c0007 | t0001 | g0053 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02809 | hp1 | a0003 | c0019 | t0001 | g0034 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02809 | hp2 | a0001 | c0002 | t0001 | g0150 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02818 | hp1 | a0001 | c0014 | t0001 | g0190 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02818 | hp2 | a0001 | c0004 | t0001 | g0225 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02886 | hp1 | a0001 | c0003 | t0001 | g0183 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02886 | hp2 | a0001 | c0014 | t0001 | g0043 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02895 | hp1 | a0001 | c0003 | t0001 | g0010 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02895 | hp2 | a0010 | c0044 | t0001 | g0267 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02896 | hp1 | a0001 | c0003 | t0001 | g0010 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02896 | hp2 | a0003 | c0016 | t0001 | g0114 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02922 | hp1 | a0001 | c0003 | t0003 | g0195 | AFR | ESN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02922 | hp2 | a0003 | c0005 | t0002 | g0067 | AFR | ESN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02965 | hp1 | a0001 | c0008 | t0001 | g0201 | AFR | ESN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02965 | hp2 | a0003 | c0030 | t0002 | g0066 | AFR | ESN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02970 | hp1 | a0001 | c0003 | t0003 | g0194 | AFR | ESN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02970 | hp2 | a0001 | c0008 | t0001 | g0203 | AFR | ESN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02976 | hp1 | a0001 | c0018 | t0003 | g0017 | AFR | ESN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02976 | hp2 | a0001 | c0008 | t0001 | g0009 | AFR | ESN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03017 | hp1 | a0002 | c0001 | t0001 | g0016 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03017 | hp2 | a0001 | c0003 | t0001 | g0245 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03041 | hp1 | a0001 | c0050 | t0001 | g0204 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03041 | hp2 | a0001 | c0002 | t0003 | g0151 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03098 | hp1 | a0003 | c0009 | t0002 | g0028 | AFR | MSL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03098 | hp2 | a0001 | c0004 | t0001 | g0226 | AFR | MSL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03130 | hp1 | a0001 | c0003 | t0001 | g0189 | AFR | ESN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03130 | hp2 | a0001 | c0018 | t0003 | g0017 | AFR | ESN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03139 | hp1 | a0001 | c0014 | t0001 | g0220 | AFR | ESN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03139 | hp2 | a0001 | c0004 | t0001 | g0050 | AFR | ESN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03195 | hp1 | a0001 | c0003 | t0001 | g0041 | AFR | ESN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03195 | hp2 | a0003 | c0005 | t0002 | g0030 | AFR | ESN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03209 | hp1 | a0011 | c0051 | t0001 | g0192 | AFR | MSL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03209 | hp2 | a0003 | c0005 | t0002 | g0026 | AFR | MSL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03225 | hp1 | a0001 | c0003 | t0003 | g0193 | AFR | MSL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03225 | hp2 | a0003 | c0029 | t0002 | g0099 | AFR | MSL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03239 | hp1 | a0001 | c0003 | t0001 | g0248 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03239 | hp2 | a0001 | c0004 | t0001 | g0011 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03453 | hp1 | a0001 | c0026 | t0004 | g0232 | AFR | MSL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03453 | hp2 | a0003 | c0005 | t0002 | g0111 | AFR | MSL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03486 | hp1 | a0003 | c0019 | t0001 | g0034 | AFR | MSL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03486 | hp2 | a0003 | c0021 | t0002 | g0065 | AFR | MSL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03490 | hp1 | a0003 | c0005 | t0002 | g0007 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03490 | hp2 | a0001 | c0003 | t0001 | g0006 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03492 | hp1 | a0001 | c0002 | t0001 | g0156 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03492 | hp2 | a0001 | c0003 | t0001 | g0006 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03516 | hp1 | a0001 | c0003 | t0001 | g0227 | AFR | ESN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03516 | hp2 | a0001 | c0003 | t0007 | g0021 | AFR | ESN | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03540 | hp1 | a0001 | c0003 | t0007 | g0021 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03540 | hp2 | a0001 | c0003 | t0001 | g0041 | AFR | GWD | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03579 | hp1 | a0003 | c0009 | t0002 | g0103 | AFR | MSL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03579 | hp2 | a0001 | c0003 | t0007 | g0021 | AFR | MSL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03654 | hp1 | a0001 | c0004 | t0001 | g0011 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03654 | hp2 | a0003 | c0005 | t0002 | g0059 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03669 | hp1 | a0002 | c0001 | t0002 | g0085 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03669 | hp2 | a0001 | c0004 | t0001 | g0045 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03688 | hp1 | a0001 | c0004 | t0001 | g0256 | SAS | STU | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03688 | hp2 | a0003 | c0012 | t0002 | g0029 | SAS | STU | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03704 | hp1 | a0001 | c0002 | t0001 | g0039 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03704 | hp2 | a0001 | c0002 | t0001 | g0018 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03710 | hp1 | a0001 | c0002 | t0001 | g0164 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03710 | hp2 | a0001 | c0004 | t0001 | g0222 | SAS | PJL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03834 | hp1 | a0001 | c0002 | t0001 | g0002 | SAS | BEB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03834 | hp2 | a0002 | c0001 | t0002 | g0079 | SAS | BEB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03927 | hp1 | a0001 | c0004 | t0001 | g0254 | SAS | BEB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03927 | hp2 | a0004 | c0007 | t0001 | g0053 | SAS | BEB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03942 | hp1 | a0001 | c0002 | t0001 | g0039 | SAS | BEB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03942 | hp2 | a0001 | c0002 | t0001 | g0018 | SAS | BEB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG04115 | hp1 | a0004 | c0007 | t0001 | g0247 | SAS | STU | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG04115 | hp2 | a0001 | c0002 | t0001 | g0168 | SAS | STU | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG04184 | hp1 | a0002 | c0001 | t0001 | g0016 | SAS | BEB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG04184 | hp2 | a0001 | c0003 | t0001 | g0135 | SAS | BEB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG04199 | hp1 | a0001 | c0004 | t0001 | g0199 | SAS | STU | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG04199 | hp2 | a0001 | c0003 | t0001 | g0006 | SAS | STU | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG04204 | hp1 | a0004 | c0007 | t0001 | g0216 | SAS | STU | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG04204 | hp2 | a0001 | c0002 | t0001 | g0169 | SAS | STU | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG04228 | hp1 | a0001 | c0003 | t0001 | g0239 | SAS | STU | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG04228 | hp2 | a0004 | c0015 | t0001 | g0257 | SAS | STU | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18522 | hp1 | a0012 | c0034 | t0002 | g0058 | AFR | YRI | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18522 | hp2 | a0003 | c0009 | t0002 | g0100 | AFR | YRI | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18612 | hp1 | a0001 | c0006 | t0001 | g0003 | EAS | CHB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18612 | hp2 | a0001 | c0002 | t0001 | g0174 | EAS | CHB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18747 | hp1 | a0002 | c0001 | t0002 | g0001 | EAS | CHB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18747 | hp2 | a0004 | c0015 | t0001 | g0046 | EAS | CHB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18906 | hp1 | a0003 | c0005 | t0002 | g0097 | AFR | YRI | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18906 | hp2 | a0001 | c0008 | t0001 | g0188 | AFR | YRI | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18940 | hp1 | a0001 | c0002 | t0001 | g0005 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18940 | hp2 | a0001 | c0006 | t0001 | g0042 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18941 | hp1 | a0001 | c0047 | t0001 | g0259 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18941 | hp2 | a0002 | c0001 | t0005 | g0013 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18942 | hp1 | a0002 | c0001 | t0002 | g0001 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18942 | hp2 | a0008 | c0022 | t0008 | g0075 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18943 | hp1 | a0002 | c0001 | t0002 | g0001 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18943 | hp2 | a0001 | c0004 | t0001 | g0251 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18946 | hp1 | a0002 | c0001 | t0002 | g0001 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18946 | hp2 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18947 | hp1 | a0002 | c0001 | t0002 | g0001 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18947 | hp2 | a0001 | c0004 | t0001 | g0215 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18948 | hp1 | a0001 | c0002 | t0001 | g0020 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18948 | hp2 | a0002 | c0001 | t0002 | g0001 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18949 | hp1 | a0001 | c0002 | t0001 | g0005 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18949 | hp2 | a0002 | c0001 | t0002 | g0106 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18950 | hp1 | a0013 | c0033 | t0002 | g0083 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18950 | hp2 | a0001 | c0006 | t0001 | g0003 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18952 | hp1 | a0001 | c0004 | t0001 | g0218 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18952 | hp2 | a0002 | c0001 | t0005 | g0013 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18953 | hp1 | a0001 | c0006 | t0006 | g0206 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18953 | hp2 | a0002 | c0001 | t0002 | g0094 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18957 | hp1 | a0004 | c0007 | t0001 | g0024 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18957 | hp2 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18959 | hp1 | a0001 | c0006 | t0001 | g0003 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18959 | hp2 | a0001 | c0002 | t0001 | g0020 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18960 | hp1 | a0002 | c0001 | t0010 | g0089 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18960 | hp2 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18962 | hp1 | a0004 | c0007 | t0001 | g0024 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18962 | hp2 | a0001 | c0004 | t0001 | g0209 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18964 | hp1 | a0007 | c0024 | t0002 | g0076 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18964 | hp2 | a0001 | c0004 | t0001 | g0048 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18965 | hp1 | a0001 | c0006 | t0001 | g0003 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18965 | hp2 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18966 | hp1 | a0003 | c0013 | t0001 | g0118 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18966 | hp2 | a0004 | c0010 | t0001 | g0037 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18967 | hp1 | a0001 | c0002 | t0001 | g0005 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18967 | hp2 | a0002 | c0001 | t0001 | g0117 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18968 | hp1 | a0001 | c0006 | t0001 | g0207 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18968 | hp2 | a0002 | c0001 | t0002 | g0071 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18971 | hp1 | a0002 | c0001 | t0002 | g0001 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18971 | hp2 | a0001 | c0002 | t0001 | g0054 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18972 | hp1 | a0001 | c0006 | t0001 | g0003 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18972 | hp2 | a0001 | c0002 | t0001 | g0155 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18978 | hp1 | a0002 | c0001 | t0001 | g0122 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18978 | hp2 | a0004 | c0007 | t0001 | g0253 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18979 | hp1 | a0004 | c0010 | t0001 | g0159 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18979 | hp2 | a0002 | c0001 | t0002 | g0104 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18980 | hp1 | a0001 | c0002 | t0001 | g0148 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18980 | hp2 | a0001 | c0003 | t0001 | g0208 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18981 | hp1 | a0003 | c0020 | t0002 | g0078 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18981 | hp2 | a0003 | c0009 | t0001 | g0119 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18983 | hp1 | a0003 | c0009 | t0001 | g0036 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18983 | hp2 | a0001 | c0002 | t0001 | g0040 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18984 | hp1 | a0004 | c0007 | t0001 | g0210 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18984 | hp2 | a0002 | c0001 | t0002 | g0110 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18985 | hp1 | a0001 | c0004 | t0001 | g0217 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18985 | hp2 | a0001 | c0002 | t0001 | g0140 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18986 | hp1 | a0002 | c0001 | t0002 | g0107 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18986 | hp2 | a0001 | c0006 | t0001 | g0003 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18987 | hp1 | a0002 | c0025 | t0002 | g0031 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18987 | hp2 | a0001 | c0004 | t0001 | g0136 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18988 | hp1 | a0004 | c0007 | t0001 | g0143 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18988 | hp2 | a0001 | c0002 | t0001 | g0141 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18992 | hp1 | a0014 | c0032 | t0002 | g0081 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18992 | hp2 | a0015 | c0035 | t0001 | g0152 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18994 | hp1 | a0002 | c0001 | t0002 | g0088 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18994 | hp2 | a0001 | c0006 | t0001 | g0003 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18997 | hp1 | a0003 | c0013 | t0001 | g0035 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18997 | hp2 | a0002 | c0001 | t0002 | g0074 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18998 | hp1 | a0001 | c0006 | t0001 | g0003 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18998 | hp2 | a0002 | c0001 | t0002 | g0004 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18999 | hp1 | a0001 | c0004 | t0001 | g0023 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18999 | hp2 | a0002 | c0001 | t0002 | g0004 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19001 | hp1 | a0001 | c0006 | t0001 | g0003 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19001 | hp2 | a0004 | c0007 | t0001 | g0139 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19003 | hp1 | a0001 | c0004 | t0001 | g0023 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19003 | hp2 | a0002 | c0001 | t0002 | g0001 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19004 | hp1 | a0001 | c0003 | t0001 | g0025 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19004 | hp2 | a0001 | c0006 | t0001 | g0003 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19005 | hp1 | a0002 | c0001 | t0002 | g0015 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19005 | hp2 | a0003 | c0013 | t0001 | g0125 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19007 | hp1 | a0003 | c0016 | t0002 | g0093 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19007 | hp2 | a0004 | c0010 | t0001 | g0037 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19009 | hp1 | a0003 | c0013 | t0001 | g0124 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19009 | hp2 | a0003 | c0020 | t0001 | g0127 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19010 | hp1 | a0004 | c0010 | t0001 | g0049 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19010 | hp2 | a0002 | c0001 | t0002 | g0096 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19011 | hp1 | a0002 | c0001 | t0002 | g0001 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19011 | hp2 | a0003 | c0013 | t0001 | g0035 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19012 | hp1 | a0001 | c0006 | t0001 | g0044 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19012 | hp2 | a0002 | c0001 | t0002 | g0004 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19030 | hp1 | a0001 | c0002 | t0001 | g0149 | AFR | LWK | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19030 | hp2 | a0003 | c0023 | t0002 | g0027 | AFR | LWK | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19043 | hp1 | a0001 | c0027 | t0001 | g0184 | AFR | LWK | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19043 | hp2 | a0003 | c0023 | t0002 | g0027 | AFR | LWK | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19054 | hp1 | a0001 | c0004 | t0001 | g0012 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19054 | hp2 | a0002 | c0001 | t0002 | g0004 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19055 | hp1 | a0004 | c0010 | t0001 | g0049 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19055 | hp2 | a0002 | c0001 | t0002 | g0004 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19056 | hp1 | a0004 | c0007 | t0001 | g0024 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19056 | hp2 | a0001 | c0002 | t0001 | g0180 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19057 | hp1 | a0001 | c0004 | t0001 | g0023 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19057 | hp2 | a0008 | c0022 | t0008 | g0101 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19058 | hp1 | a0001 | c0006 | t0001 | g0205 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19058 | hp2 | a0002 | c0001 | t0002 | g0001 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19059 | hp1 | a0001 | c0006 | t0001 | g0003 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19059 | hp2 | a0001 | c0037 | t0001 | g0142 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19060 | hp1 | a0003 | c0020 | t0001 | g0128 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19060 | hp2 | a0001 | c0003 | t0001 | g0262 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19063 | hp1 | a0002 | c0001 | t0002 | g0015 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19063 | hp2 | a0004 | c0015 | t0006 | g0264 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19065 | hp1 | a0001 | c0002 | t0001 | g0154 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19065 | hp2 | a0001 | c0006 | t0001 | g0003 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19066 | hp1 | a0001 | c0006 | t0001 | g0042 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19066 | hp2 | a0001 | c0002 | t0001 | g0161 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19068 | hp1 | a0002 | c0001 | t0002 | g0001 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19068 | hp2 | a0001 | c0002 | t0001 | g0175 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19070 | hp1 | a0002 | c0025 | t0002 | g0031 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19070 | hp2 | a0001 | c0004 | t0001 | g0255 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19077 | hp1 | a0002 | c0001 | t0002 | g0001 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19077 | hp2 | a0001 | c0004 | t0001 | g0056 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19079 | hp1 | a0002 | c0001 | t0002 | g0001 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19079 | hp2 | a0004 | c0007 | t0001 | g0263 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19080 | hp1 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19080 | hp2 | a0002 | c0001 | t0002 | g0001 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19081 | hp1 | a0001 | c0004 | t0001 | g0055 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19081 | hp2 | a0001 | c0002 | t0001 | g0002 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19083 | hp1 | a0004 | c0010 | t0001 | g0223 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19083 | hp2 | a0001 | c0003 | t0001 | g0266 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19084 | hp1 | a0001 | c0002 | t0001 | g0153 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19084 | hp2 | a0001 | c0004 | t0001 | g0048 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19085 | hp1 | a0001 | c0003 | t0001 | g0261 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19085 | hp2 | a0002 | c0001 | t0002 | g0077 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19086 | hp1 | a0003 | c0009 | t0001 | g0036 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19086 | hp2 | a0002 | c0001 | t0005 | g0013 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19087 | hp1 | a0001 | c0006 | t0001 | g0003 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19087 | hp2 | a0002 | c0001 | t0002 | g0001 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19090 | hp1 | a0001 | c0006 | t0001 | g0044 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19090 | hp2 | a0002 | c0001 | t0002 | g0001 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19091 | hp1 | a0002 | c0001 | t0002 | g0001 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19091 | hp2 | a0001 | c0004 | t0001 | g0056 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19240 | hp1 | a0003 | c0019 | t0001 | g0112 | AFR | YRI | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA19240 | hp2 | a0001 | c0008 | t0001 | g0200 | AFR | YRI | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA20129 | hp1 | a0001 | c0003 | t0001 | g0187 | AFR | ASW | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA20129 | hp2 | a0001 | c0003 | t0001 | g0202 | AFR | ASW | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA20752 | hp1 | a0001 | c0002 | t0001 | g0163 | EUR | TSI | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA20752 | hp2 | a0002 | c0001 | t0001 | g0123 | EUR | TSI | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA20905 | hp1 | a0001 | c0002 | t0001 | g0018 | SAS | GIH | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA20905 | hp2 | a0001 | c0004 | t0001 | g0250 | SAS | GIH | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02109 | hp1 | a0001 | c0003 | t0001 | g0006 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02109 | hp2 | a0003 | c0012 | t0002 | g0069 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02486 | hp1 | a0001 | c0018 | t0003 | g0017 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02486 | hp2 | a0001 | c0003 | t0001 | g0243 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02559 | hp1 | a0001 | c0027 | t0001 | g0228 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG02559 | hp2 | a0003 | c0005 | t0002 | g0086 | AFR | ACB | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03471 | hp1 | a0001 | c0018 | t0003 | g0144 | AFR | MSL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG03471 | hp2 | a0001 | c0008 | t0001 | g0197 | AFR | MSL | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG06807 | hp1 | a0003 | c0005 | t0009 | g0060 | AFR | USA | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| HG06807 | hp2 | a0001 | c0003 | t0001 | g0230 | AFR | USA | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18955 | hp1 | a0001 | c0004 | t0001 | g0055 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA18955 | hp2 | a0002 | c0001 | t0002 | g0004 | EAS | JPT | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA20300 | hp1 | a0001 | c0040 | t0001 | g0211 | AFR | USA | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA20300 | hp2 | a0001 | c0002 | t0001 | g0002 | AFR | USA | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA21309 | hp1 | a0001 | c0003 | t0001 | g0010 | AFR | LWK | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| NA21309 | hp2 | a0003 | c0005 | t0002 | g0064 | AFR | LWK | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| homoSapiens | chm13v2 | a0002 | c0001 | t0001 | g0016 | REF | REF | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| homoSapiens | grch38p0 | a0003 | c0005 | t0002 | g0007 | REF | REF | COL2A1_chr12_47967967_48009476 | COL2A1 | chr12 | 47967967 | 48009476 |
| view | chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr12:47973544 | C | T | 2 | a0011 a0012 |
2 | HG03209.hp1 NA18522.hp1 |
missense_variant | MODERATE | c.4327G>A | p.Gly1443Ser | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 54/54 | 4482/5059 | 4327/4464 | 1443/1487 | chr12 | 47973544 | |||
| chr12:47974193 | C | T | 6 | a0002 a0004 a0007 others(3): Show |
108 | HG00280.hp1 HG00408.hp2 HG00423.hp1 others(105): Show |
missense_variant | MODERATE | c.4213G>A | p.Gly1405Ser | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 53/54 | 4368/5059 | 4213/4464 | 1405/1487 | chr12 | 47974193 | |||
| chr12:47974758 | C | T | 2 | a0006 a0008 |
4 | HG00280.hp2 HG02735.hp1 NA18942.hp2 others(1): Show |
missense_variant | MODERATE | c.3991G>A | p.Val1331Ile | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 52/54 | 4146/5059 | 3991/4464 | 1331/1487 | chr12 | 47974758 | |||
| chr12:47977388 | C | T | 1 | a0013 | 1 | NA18950.hp1 | missense_variant | MODERATE | c.3205G>A | p.Ala1069Thr | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 46/54 | 3360/5059 | 3205/4464 | 1069/1487 | chr12 | 47977388 | |||
| chr12:47977614 | C | T | 1 | a0010 | 1 | HG02895.hp2 | missense_variant | MODERATE | c.3151G>A | p.Ala1051Thr | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 45/54 | 3306/5059 | 3151/4464 | 1051/1487 | chr12 | 47977614 | |||
| chr12:47978636 | GGGTCCAG others(5): Show |
G | 1 | a0014 | 1 | NA18992.hp1 | disruptive_inframe_deletion | MODERATE | c.2844_2855delTCCTGC others(6): Show |
p.Pro949_Pro952del | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 42/54 | 3010/5059 | 2844/4464 | 948/1487 | chr12 | 47978636 | |||
| chr12:47978638 | G | T | 1 | a0001 | 2 | NA18612.hp1 NA18950.hp2 |
missense_variant | MODERATE | c.2854C>A | p.Pro952Thr | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 42/54 | 3009/5059 | 2854/4464 | 952/1487 | chr12 | 47978638 | |||
| chr12:47984115 | G | A | 2 | a0007 a0013 |
3 | HG02015.hp2 NA18950.hp1 NA18964.hp1 |
missense_variant | MODERATE | c.1913C>T | p.Thr638Ile | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 29/54 | 2068/5059 | 1913/4464 | 638/1487 | chr12 | 47984115 | |||
| chr12:47986430 | G | A | 2 | a0011 a0012 |
2 | HG03209.hp1 NA18522.hp1 |
missense_variant | MODERATE | c.1433C>T | p.Pro478Leu | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 23/54 | 1588/5059 | 1433/4464 | 478/1487 | chr12 | 47986430 | |||
| chr12:47993828 | G | C | 1 | a0015 | 1 | NA18992.hp2 | missense_variant | MODERATE | c.905C>G | p.Ala302Gly | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 14/54 | 1060/5059 | 905/4464 | 302/1487 | chr12 | 47993828 | |||
| chr12:47993829 | C | G | 1 | a0015 | 1 | NA18992.hp2 | missense_variant | MODERATE | c.904G>C | p.Ala302Pro | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 14/54 | 1059/5059 | 904/4464 | 302/1487 | chr12 | 47993829 | |||
| chr12:47997874 | T | A | 1 | a0005 | 7 | HG00639.hp1 HG00733.hp2 HG00735.hp1 others(4): Show |
missense_variant | MODERATE | c.426A>T | p.Glu142Asp | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 6/54 | 581/5059 | 426/4464 | 142/1487 | chr12 | 47997874 | |||
| chr12:48004297 | T | A | 7 | a0001 a0004 a0005 others(4): Show |
267 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(264): Show |
missense_variant | MODERATE | c.25A>T | p.Thr9Ser | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/54 | 180/5059 | 25/4464 | 9/1487 | chr12 | 48004297 | |||
| chr12:48004305 | G | T | 1 | a0009 | 1 | HG02165.hp1 | missense_variant | MODERATE | c.17C>A | p.Ala6Asp | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/54 | 172/5059 | 17/4464 | 6/1487 | chr12 | 48004305 |
| view | chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr12:47973422 | C | T | 1 | a0001c0026 | 2 | HG02258.hp1 HG03453.hp1 |
synonymous_variant | LOW | c.4449G>A | p.Pro1483Pro | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 54/54 | 4604/5059 | 4449/4464 | 1483/1487 | chr12 | 47973422 | |||
| chr12:47974681 | G | A | 5 | a0001c0008 a0001c0046 a0001c0050 others(2): Show |
20 | HG01109.hp1 HG01192.hp1 HG02109.hp2 others(17): Show |
synonymous_variant | LOW | c.4068C>T | p.Gly1356Gly | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 52/54 | 4223/5059 | 4068/4464 | 1356/1487 | chr12 | 47974681 | |||
| chr12:47974708 | G | T | 1 | a0001c0045 | 1 | HG00642.hp1 | synonymous_variant | LOW | c.4041C>A | p.Ile1347Ile | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 52/54 | 4196/5059 | 4041/4464 | 1347/1487 | chr12 | 47974708 | |||
| chr12:47975333 | G | A | 1 | a0003c0031 | 1 | HG01884.hp2 | synonymous_variant | LOW | c.3870C>T | p.His1290His | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 51/54 | 4025/5059 | 3870/4464 | 1290/1487 | chr12 | 47975333 | |||
| chr12:47975540 | G | A | 1 | a0001c0047 | 1 | NA18941.hp1 | synonymous_variant | LOW | c.3663C>T | p.Ser1221Ser | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 51/54 | 3818/5059 | 3663/4464 | 1221/1487 | chr12 | 47975540 | |||
| chr12:47978019 | A | G | 2 | a0011c0051 a0012c0034 |
2 | HG03209.hp1 NA18522.hp1 |
synonymous_variant | LOW | c.3102T>C | p.Pro1034Pro | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 44/54 | 3257/5059 | 3102/4464 | 1034/1487 | chr12 | 47978019 | |||
| chr12:47978294 | C | T | 6 | a0001c0014 a0003c0019 a0003c0021 others(3): Show |
13 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(10): Show |
synonymous_variant | LOW | c.3000G>A | p.Pro1000Pro | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 43/54 | 3155/5059 | 3000/4464 | 1000/1487 | chr12 | 47978294 | |||
| chr12:47980015 | G | C | 3 | a0001c0006 a0001c0037 a0003c0020 |
27 | HG00621.hp1 HG02040.hp1 HG02074.hp1 others(24): Show |
synonymous_variant | LOW | c.2673C>G | p.Gly891Gly | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 40/54 | 2828/5059 | 2673/4464 | 891/1487 | chr12 | 47980015 | |||
| chr12:47980948 | C | G | 5 | a0003c0019 a0003c0031 a0010c0044 others(2): Show |
7 | HG01884.hp2 HG02809.hp1 HG02895.hp2 others(4): Show |
synonymous_variant | LOW | c.2484G>C | p.Gly828Gly | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 38/54 | 2639/5059 | 2484/4464 | 828/1487 | chr12 | 47980948 | |||
| chr12:47981785 | A | G | 29 | a0001c0002 a0001c0004 a0001c0006 others(26): Show |
216 | HG00140.hp1 HG00280.hp2 HG00323.hp1 others(213): Show |
synonymous_variant | LOW | c.2400T>C | p.Asn800Asn | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 36/54 | 2555/5059 | 2400/4464 | 800/1487 | chr12 | 47981785 | |||
| chr12:47982508 | G | A | 21 | a0001c0002 a0001c0004 a0001c0006 others(18): Show |
201 | HG00140.hp1 HG00140.hp2 HG00323.hp1 others(198): Show |
synonymous_variant | LOW | c.2295C>T | p.Gly765Gly | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 34/54 | 2450/5059 | 2295/4464 | 765/1487 | chr12 | 47982508 | |||
| chr12:47982881 | G | T | 3 | a0001c0026 a0001c0042 a0003c0030 |
4 | HG01884.hp1 HG02258.hp1 HG02965.hp2 others(1): Show |
synonymous_variant | LOW | c.2160C>A | p.Gly720Gly | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 33/54 | 2315/5059 | 2160/4464 | 720/1487 | chr12 | 47982881 | |||
| chr12:47982911 | G | A | 2 | a0001c0050 a0003c0023 |
3 | HG03041.hp1 NA19030.hp2 NA19043.hp2 |
synonymous_variant | LOW | c.2130C>T | p.Pro710Pro | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 33/54 | 2285/5059 | 2130/4464 | 710/1487 | chr12 | 47982911 | |||
| chr12:47984597 | A | G | 1 | a0001c0041 | 1 | HG00741.hp1 | splice_region_variant&synonymous_variant | LOW | c.1836T>C | p.Gly612Gly | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 28/54 | 1991/5059 | 1836/4464 | 612/1487 | chr12 | 47984597 | |||
| chr12:47985948 | G | T | 1 | a0001c0040 | 1 | NA20300.hp1 | synonymous_variant | LOW | c.1545C>A | p.Arg515Arg | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 24/54 | 1700/5059 | 1545/4464 | 515/1487 | chr12 | 47985948 | |||
| chr12:47987156 | A | G | 1 | a0001c0039 | 1 | HG01106.hp1 | synonymous_variant | LOW | c.1287T>C | p.Gly429Gly | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 21/54 | 1442/5059 | 1287/4464 | 429/1487 | chr12 | 47987156 | |||
| chr12:47989761 | C | T | 1 | a0001c0038 | 1 | HG02630.hp1 | splice_region_variant&synonymous_variant | LOW | c.1068G>A | p.Pro356Pro | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 17/54 | 1223/5059 | 1068/4464 | 356/1487 | chr12 | 47989761 | |||
| chr12:47997633 | G | T | 10 | a0001c0002 a0001c0018 a0001c0037 others(7): Show |
106 | HG00140.hp1 HG00323.hp1 HG00408.hp2 others(103): Show |
synonymous_variant | LOW | c.504C>A | p.Gly168Gly | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 7/54 | 659/5059 | 504/4464 | 168/1487 | chr12 | 47997633 | |||
| chr12:47998199 | T | C | 1 | a0002c0025 | 2 | NA18987.hp1 NA19070.hp1 |
splice_region_variant&synonymous_variant | LOW | c.312A>G | p.Gly104Gly | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 4/54 | 467/5059 | 312/4464 | 104/1487 | chr12 | 47998199 |
| view | chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr12:47973102 | C | T | 1 | a0001c0003t0011 | 1 | HG00099.hp1 | 3_prime_UTR_variant | MODIFIER | c.*305G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 54/54 | 305 | chr12 | 47973102 | ||||||
| chr12:47973112 | G | A | 3 | a0001c0002t0003 a0001c0003t0003 a0001c0018t0003 |
8 | HG02486.hp1 HG02922.hp1 HG02970.hp1 others(5): Show |
3_prime_UTR_variant | MODIFIER | c.*295C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 54/54 | 295 | chr12 | 47973112 | ||||||
| chr12:47973172 | G | A | 1 | a0004c0017t0012 | 1 | HG00621.hp2 | 3_prime_UTR_variant | MODIFIER | c.*235C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 54/54 | 235 | chr12 | 47973172 | ||||||
| chr12:47973267 | G | T | 1 | a0002c0001t0010 | 1 | NA18960.hp1 | 3_prime_UTR_variant | MODIFIER | c.*140C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 54/54 | 140 | chr12 | 47973267 | ||||||
| chr12:47973271 | G | A | 4 | a0001c0026t0004 a0006c0036t0004 a0006c0043t0004 others(1): Show |
6 | HG00280.hp2 HG02258.hp1 HG02735.hp1 others(3): Show |
3_prime_UTR_variant | MODIFIER | c.*136C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 54/54 | 136 | chr12 | 47973271 | ||||||
| chr12:47973379 | G | A | 3 | a0001c0006t0006 a0002c0001t0005 a0004c0015t0006 |
6 | HG02132.hp1 NA18941.hp2 NA18952.hp2 others(3): Show |
3_prime_UTR_variant | MODIFIER | c.*28C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 54/54 | 28 | chr12 | 47973379 | ||||||
| chr12:47973403 | G | A | 2 | a0001c0003t0007 a0003c0005t0009 |
5 | HG02055.hp2 HG03516.hp2 HG03540.hp1 others(2): Show |
3_prime_UTR_variant | MODIFIER | c.*4C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 54/54 | 4 | chr12 | 47973403 | ||||||
| chr12:48004440 | G | A | 46 | a0001c0002t0001 a0001c0002t0003 a0001c0003t0001 others(43): Show |
292 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(289): Show |
5_prime_UTR_variant | MODIFIER | c.-119C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/54 | 119 | chr12 | 48004440 |
| view | chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| chr12:47973570 | G | A | 1 | a0001c0046t0001g0191 | 1 | HG02145.hp1 | intron_variant | MODIFIER | c.4318-17C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 53/53 | chr12 | 47973570 | |||||||
| chr12:47973588 | A | G | 1 | a0010c0044t0001g0267 | 1 | HG02895.hp2 | intron_variant | MODIFIER | c.4318-35T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 53/53 | chr12 | 47973588 | |||||||
| chr12:47973644 | G | A | 15 | a0001c0002t0001g0149 a0001c0002t0001g0150 a0001c0002t0003g0151 others(12): Show |
19 | HG01346.hp2 HG01891.hp1 HG02055.hp1 others(16): Show |
intron_variant | MODIFIER | c.4318-91C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 53/53 | chr12 | 47973644 | |||||||
| chr12:47973682 | GC | G | 4 | a0006c0036t0004g0157 a0006c0043t0004g0214 a0008c0022t0008g0075 others(1): Show |
4 | HG00280.hp2 HG02735.hp1 NA18942.hp2 others(1): Show |
intron_variant | MODIFIER | c.4318-130delG | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 53/53 | chr12 | 47973682 | |||||||
| chr12:47973774 | C | G | 2 | a0011c0051t0001g0192 a0012c0034t0002g0058 |
2 | HG03209.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.4318-221G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 53/53 | chr12 | 47973774 | |||||||
| chr12:47974046 | G | A | 62 | a0001c0002t0001g0018 a0001c0002t0001g0019 a0001c0002t0001g0039 others(59): Show |
99 | HG00323.hp1 HG00621.hp1 HG00639.hp2 others(96): Show |
intron_variant | MODIFIER | c.4317+43C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 53/53 | chr12 | 47974046 | |||||||
| chr12:47974054 | C | G | 1 | a0003c0031t0001g0113 | 1 | HG01884.hp2 | intron_variant | MODIFIER | c.4317+35G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 53/53 | chr12 | 47974054 | |||||||
| chr12:47974345 | G | C | 4 | a0006c0036t0004g0157 a0006c0043t0004g0214 a0008c0022t0008g0075 others(1): Show |
4 | HG00280.hp2 HG02735.hp1 NA18942.hp2 others(1): Show |
intron_variant | MODIFIER | c.4075-14C>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 52/53 | chr12 | 47974345 | |||||||
| chr12:47974388 | G | T | 3 | a0003c0031t0001g0113 a0011c0051t0001g0192 a0012c0034t0002g0058 |
3 | HG01884.hp2 HG03209.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.4075-57C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 52/53 | chr12 | 47974388 | |||||||
| chr12:47974479 | G | A | 2 | a0003c0019t0001g0034 a0003c0019t0001g0112 |
3 | HG02809.hp1 HG03486.hp1 NA19240.hp1 |
intron_variant | MODIFIER | c.4075-148C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 52/53 | chr12 | 47974479 | |||||||
| chr12:47974513 | C | T | 4 | a0006c0036t0004g0157 a0006c0043t0004g0214 a0008c0022t0008g0075 others(1): Show |
4 | HG00280.hp2 HG02735.hp1 NA18942.hp2 others(1): Show |
intron_variant | MODIFIER | c.4074+162G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 52/53 | chr12 | 47974513 | |||||||
| chr12:47974559 | C | T | 1 | a0001c0037t0001g0142 | 1 | NA19059.hp2 | intron_variant | MODIFIER | c.4074+116G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 52/53 | chr12 | 47974559 | |||||||
| chr12:47974623 | AAG | A | 4 | a0006c0036t0004g0157 a0006c0043t0004g0214 a0008c0022t0008g0075 others(1): Show |
4 | HG00280.hp2 HG02735.hp1 NA18942.hp2 others(1): Show |
intron_variant | MODIFIER | c.4074+50_4074+51del others(2): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 52/53 | chr12 | 47974623 | |||||||
| chr12:47975097 | G | T | 2 | a0001c0026t0004g0231 a0001c0026t0004g0232 |
2 | HG02258.hp1 HG03453.hp1 |
intron_variant | MODIFIER | c.3886+220C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 51/53 | chr12 | 47975097 | |||||||
| chr12:47975104 | G | A | 3 | a0001c0003t0007g0021 a0003c0005t0009g0060 a0003c0005t0009g0105 |
5 | HG02055.hp2 HG03516.hp2 HG03540.hp1 others(2): Show |
intron_variant | MODIFIER | c.3886+213C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 51/53 | chr12 | 47975104 | |||||||
| chr12:47975110 | C | T | 61 | a0002c0001t0001g0016 a0002c0001t0001g0116 a0002c0001t0001g0117 others(58): Show |
108 | HG00280.hp1 HG00408.hp2 HG00423.hp1 others(105): Show |
intron_variant | MODIFIER | c.3886+207G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 51/53 | chr12 | 47975110 | |||||||
| chr12:47975206 | A | C | 58 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0020 others(55): Show |
92 | HG00140.hp1 HG00323.hp2 HG00423.hp2 others(89): Show |
intron_variant | MODIFIER | c.3886+111T>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 51/53 | chr12 | 47975206 | |||||||
| chr12:47975212 | A | G | 1 | a0001c0027t0001g0228 | 1 | HG02559.hp1 | intron_variant | MODIFIER | c.3886+105T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 51/53 | chr12 | 47975212 | |||||||
| chr12:47975242 | T | G | 4 | a0006c0036t0004g0157 a0006c0043t0004g0214 a0008c0022t0008g0075 others(1): Show |
4 | HG00280.hp2 HG02735.hp1 NA18942.hp2 others(1): Show |
intron_variant | MODIFIER | c.3886+75A>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 51/53 | chr12 | 47975242 | |||||||
| chr12:47975624 | A | C | 2 | a0011c0051t0001g0192 a0012c0034t0002g0058 |
2 | HG03209.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.3598-19T>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 50/53 | chr12 | 47975624 | |||||||
| chr12:47975719 | C | T | 1 | a0003c0019t0001g0112 | 1 | NA19240.hp1 | intron_variant | MODIFIER | c.3598-114G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 50/53 | chr12 | 47975719 | |||||||
| chr12:47975774 | T | G | 1 | a0001c0002t0001g0158 | 1 | HG02083.hp1 | intron_variant | MODIFIER | c.3598-169A>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 50/53 | chr12 | 47975774 | |||||||
| chr12:47975801 | C | T | 3 | a0003c0031t0001g0113 a0011c0051t0001g0192 a0012c0034t0002g0058 |
3 | HG01884.hp2 HG03209.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.3597+162G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 50/53 | chr12 | 47975801 | |||||||
| chr12:47975831 | A | G | 1 | a0003c0013t0001g0035 | 2 | NA18997.hp1 NA19011.hp2 |
intron_variant | MODIFIER | c.3597+132T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 50/53 | chr12 | 47975831 | |||||||
| chr12:47975865 | C | T | 1 | a0001c0026t0004g0231 | 1 | HG02258.hp1 | intron_variant | MODIFIER | c.3597+98G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 50/53 | chr12 | 47975865 | |||||||
| chr12:47975901 | G | A | 11 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(8): Show |
13 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(10): Show |
intron_variant | MODIFIER | c.3597+62C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 50/53 | chr12 | 47975901 | |||||||
| chr12:47976089 | G | T | 1 | a0001c0004t0001g0212 | 1 | HG01243.hp1 | intron_variant | MODIFIER | c.3490-19C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 49/53 | chr12 | 47976089 | |||||||
| chr12:47976136 | C | T | 1 | a0001c0027t0001g0228 | 1 | HG02559.hp1 | intron_variant | MODIFIER | c.3490-66G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 49/53 | chr12 | 47976136 | |||||||
| chr12:47976140 | G | A | 16 | a0001c0008t0001g0009 a0001c0008t0001g0186 a0001c0008t0001g0188 others(13): Show |
20 | HG01109.hp1 HG01192.hp1 HG02109.hp2 others(17): Show |
intron_variant | MODIFIER | c.3490-70C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 49/53 | chr12 | 47976140 | |||||||
| chr12:47976222 | T | A | 11 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(8): Show |
13 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(10): Show |
intron_variant | MODIFIER | c.3490-152A>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 49/53 | chr12 | 47976222 | |||||||
| chr12:47976272 | C | T | 1 | a0002c0001t0002g0106 | 1 | NA18949.hp2 | intron_variant | MODIFIER | c.3490-202G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 49/53 | chr12 | 47976272 | |||||||
| chr12:47976292 | T | TTCCCAGG others(2): Show |
11 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(8): Show |
13 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(10): Show |
intron_variant | MODIFIER | c.3489+221_3489+222i others(11): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 49/53 | chr12 | 47976292 | |||||||
| chr12:47976597 | G | A | 1 | a0001c0002t0001g0169 | 1 | HG04204.hp2 | intron_variant | MODIFIER | c.3436-30C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 48/53 | chr12 | 47976597 | |||||||
| chr12:47976640 | A | G | 11 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(8): Show |
13 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(10): Show |
intron_variant | MODIFIER | c.3436-73T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 48/53 | chr12 | 47976640 | |||||||
| chr12:47976794 | G | A | 1 | a0001c0004t0001g0218 | 1 | NA18952.hp1 | intron_variant | MODIFIER | c.3435+18C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 48/53 | chr12 | 47976794 | |||||||
| chr12:47976939 | C | A | 11 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(8): Show |
13 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(10): Show |
intron_variant | MODIFIER | c.3328-20G>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 47/53 | chr12 | 47976939 | |||||||
| chr12:47977008 | A | C | 11 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(8): Show |
13 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(10): Show |
intron_variant | MODIFIER | c.3328-89T>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 47/53 | chr12 | 47977008 | |||||||
| chr12:47977021 | G | A | 1 | a0002c0001t0002g0068 | 1 | HG00735.hp2 | intron_variant | MODIFIER | c.3327+81C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 47/53 | chr12 | 47977021 | |||||||
| chr12:47977173 | G | A | 1 | a0001c0014t0001g0190 | 1 | HG02818.hp1 | intron_variant | MODIFIER | c.3274-18C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 46/53 | chr12 | 47977173 | |||||||
| chr12:47977187 | A | C | 1 | a0004c0015t0001g0046 | 2 | HG02129.hp2 NA18747.hp2 |
intron_variant | MODIFIER | c.3274-32T>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 46/53 | chr12 | 47977187 | |||||||
| chr12:47977205 | G | A | 2 | a0001c0026t0004g0231 a0001c0026t0004g0232 |
2 | HG02258.hp1 HG03453.hp1 |
intron_variant | MODIFIER | c.3274-50C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 46/53 | chr12 | 47977205 | |||||||
| chr12:47977228 | T | C | 11 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(8): Show |
13 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(10): Show |
intron_variant | MODIFIER | c.3274-73A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 46/53 | chr12 | 47977228 | |||||||
| chr12:47977262 | A | G | 1 | a0006c0043t0004g0214 | 1 | HG00280.hp2 | intron_variant | MODIFIER | c.3273+58T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 46/53 | chr12 | 47977262 | |||||||
| chr12:47977557 | T | C | 12 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(9): Show |
14 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(11): Show |
intron_variant | MODIFIER | c.3165+43A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 45/53 | chr12 | 47977557 | |||||||
| chr12:47977561 | C | G | 2 | a0003c0019t0001g0034 a0003c0019t0001g0112 |
3 | HG02809.hp1 HG03486.hp1 NA19240.hp1 |
intron_variant | MODIFIER | c.3165+39G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 45/53 | chr12 | 47977561 | |||||||
| chr12:47977799 | C | T | 1 | a0001c0002t0001g0164 | 1 | HG03710.hp1 | intron_variant | MODIFIER | c.3112-146G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 44/53 | chr12 | 47977799 | |||||||
| chr12:47977812 | G | A | 81 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(78): Show |
142 | HG00140.hp1 HG00323.hp1 HG00438.hp1 others(139): Show |
intron_variant | MODIFIER | c.3112-159C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 44/53 | chr12 | 47977812 | |||||||
| chr12:47977842 | C | G | 1 | a0003c0009t0002g0100 | 1 | NA18522.hp2 | intron_variant | MODIFIER | c.3111+168G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 44/53 | chr12 | 47977842 | |||||||
| chr12:47977896 | C | T | 12 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(9): Show |
14 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(11): Show |
intron_variant | MODIFIER | c.3111+114G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 44/53 | chr12 | 47977896 | |||||||
| chr12:47977937 | T | G | 12 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(9): Show |
14 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(11): Show |
intron_variant | MODIFIER | c.3111+73A>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 44/53 | chr12 | 47977937 | |||||||
| chr12:47977984 | C | T | 12 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(9): Show |
14 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(11): Show |
intron_variant | MODIFIER | c.3111+26G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 44/53 | chr12 | 47977984 | |||||||
| chr12:47978269 | G | C | 2 | a0003c0009t0002g0032 a0003c0009t0002g0072 |
3 | HG01891.hp1 HG02055.hp1 HG02717.hp2 |
intron_variant | MODIFIER | c.3003+22C>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 43/53 | chr12 | 47978269 | |||||||
| chr12:47978476 | C | T | 1 | a0003c0031t0001g0113 | 1 | HG01884.hp2 | intron_variant | MODIFIER | c.2896-78G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 42/53 | chr12 | 47978476 | |||||||
| chr12:47978500 | C | T | 4 | a0003c0031t0001g0113 a0010c0044t0001g0267 a0011c0051t0001g0192 others(1): Show |
4 | HG01884.hp2 HG02895.hp2 HG03209.hp1 others(1): Show |
intron_variant | MODIFIER | c.2895+97G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 42/53 | chr12 | 47978500 | |||||||
| chr12:47978550 | C | T | 2 | a0003c0019t0001g0034 a0003c0019t0001g0112 |
3 | HG02809.hp1 HG03486.hp1 NA19240.hp1 |
intron_variant | MODIFIER | c.2895+47G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 42/53 | chr12 | 47978550 | |||||||
| chr12:47978800 | TTCC | T | 25 | a0001c0003t0007g0021 a0001c0004t0001g0050 a0001c0004t0001g0225 others(22): Show |
33 | HG00408.hp1 HG01109.hp1 HG01192.hp1 others(30): Show |
intron_variant | MODIFIER | c.2734-45_2734-43del others(3): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 41/53 | chr12 | 47978800 | |||||||
| chr12:47978857 | G | A | 6 | a0001c0002t0003g0151 a0001c0003t0003g0193 a0001c0003t0003g0194 others(3): Show |
8 | HG02486.hp1 HG02922.hp1 HG02970.hp1 others(5): Show |
intron_variant | MODIFIER | c.2734-99C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 41/53 | chr12 | 47978857 | |||||||
| chr12:47978903 | C | G | 1 | a0001c0039t0001g0246 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.2734-145G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 41/53 | chr12 | 47978903 | |||||||
| chr12:47978919 | G | A | 1 | a0002c0001t0002g0090 | 1 | HG01993.hp1 | intron_variant | MODIFIER | c.2734-161C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 41/53 | chr12 | 47978919 | |||||||
| chr12:47978957 | A | T | 12 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(9): Show |
14 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(11): Show |
intron_variant | MODIFIER | c.2734-199T>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 41/53 | chr12 | 47978957 | |||||||
| chr12:47978970 | C | T | 1 | a0001c0004t0001g0256 | 1 | HG03688.hp1 | intron_variant | MODIFIER | c.2734-212G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 41/53 | chr12 | 47978970 | |||||||
| chr12:47979006 | C | T | 13 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(10): Show |
15 | HG00280.hp2 HG01167.hp2 HG01884.hp2 others(12): Show |
intron_variant | MODIFIER | c.2734-248G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 41/53 | chr12 | 47979006 | |||||||
| chr12:47979027 | C | T | 1 | a0006c0043t0004g0214 | 1 | HG00280.hp2 | intron_variant | MODIFIER | c.2734-269G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 41/53 | chr12 | 47979027 | |||||||
| chr12:47979060 | G | A | 1 | a0003c0030t0002g0066 | 1 | HG02965.hp2 | intron_variant | MODIFIER | c.2734-302C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 41/53 | chr12 | 47979060 | |||||||
| chr12:47979097 | C | T | 12 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(9): Show |
14 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(11): Show |
intron_variant | MODIFIER | c.2734-339G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 41/53 | chr12 | 47979097 | |||||||
| chr12:47979105 | T | G | 258 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(255): Show |
398 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(395): Show |
intron_variant | MODIFIER | c.2734-347A>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 41/53 | chr12 | 47979105 | |||||||
| chr12:47979181 | G | A | 2 | a0001c0018t0003g0017 a0001c0018t0003g0144 |
4 | HG02486.hp1 HG02976.hp1 HG03130.hp2 others(1): Show |
intron_variant | MODIFIER | c.2733+330C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 41/53 | chr12 | 47979181 | |||||||
| chr12:47979272 | C | G | 12 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(9): Show |
14 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(11): Show |
intron_variant | MODIFIER | c.2733+239G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 41/53 | chr12 | 47979272 | |||||||
| chr12:47979291 | A | G | 12 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(9): Show |
14 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(11): Show |
intron_variant | MODIFIER | c.2733+220T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 41/53 | chr12 | 47979291 | |||||||
| chr12:47979302 | G | A | 12 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(9): Show |
14 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(11): Show |
intron_variant | MODIFIER | c.2733+209C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 41/53 | chr12 | 47979302 | |||||||
| chr12:47979314 | T | G | 12 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(9): Show |
14 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(11): Show |
intron_variant | MODIFIER | c.2733+197A>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 41/53 | chr12 | 47979314 | |||||||
| chr12:47979318 | G | A | 12 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(9): Show |
14 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(11): Show |
intron_variant | MODIFIER | c.2733+193C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 41/53 | chr12 | 47979318 | |||||||
| chr12:47979393 | G | A | 2 | a0003c0019t0001g0034 a0003c0019t0001g0112 |
3 | HG02809.hp1 HG03486.hp1 NA19240.hp1 |
intron_variant | MODIFIER | c.2733+118C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 41/53 | chr12 | 47979393 | |||||||
| chr12:47979398 | A | G | 62 | a0001c0002t0001g0039 a0001c0002t0001g0179 a0001c0002t0001g0249 others(59): Show |
79 | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(76): Show |
intron_variant | MODIFIER | c.2733+113T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 41/53 | chr12 | 47979398 | |||||||
| chr12:47979636 | C | G | 1 | a0001c0006t0001g0207 | 1 | NA18968.hp1 | intron_variant | MODIFIER | c.2680-72G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 40/53 | chr12 | 47979636 | |||||||
| chr12:47979655 | T | C | 1 | a0001c0039t0001g0246 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.2680-91A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 40/53 | chr12 | 47979655 | |||||||
| chr12:47979669 | C | T | 7 | a0003c0019t0001g0034 a0003c0019t0001g0112 a0003c0021t0002g0065 others(4): Show |
8 | HG01884.hp2 HG02809.hp1 HG02895.hp2 others(5): Show |
intron_variant | MODIFIER | c.2680-105G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 40/53 | chr12 | 47979669 | |||||||
| chr12:47979696 | T | G | 12 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(9): Show |
14 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(11): Show |
intron_variant | MODIFIER | c.2680-132A>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 40/53 | chr12 | 47979696 | |||||||
| chr12:47979719 | C | T | 1 | a0001c0003t0001g0235 | 1 | HG00099.hp2 | intron_variant | MODIFIER | c.2680-155G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 40/53 | chr12 | 47979719 | |||||||
| chr12:47979728 | T | C | 12 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(9): Show |
14 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(11): Show |
intron_variant | MODIFIER | c.2680-164A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 40/53 | chr12 | 47979728 | |||||||
| chr12:47979753 | C | A | 1 | a0001c0004t0001g0225 | 1 | HG02818.hp2 | intron_variant | MODIFIER | c.2680-189G>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 40/53 | chr12 | 47979753 | |||||||
| chr12:47979787 | G | T | 27 | a0001c0002t0001g0019 a0001c0002t0001g0040 a0001c0002t0001g0156 others(24): Show |
53 | HG00621.hp1 HG00639.hp2 HG01069.hp1 others(50): Show |
intron_variant | MODIFIER | c.2679+222C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 40/53 | chr12 | 47979787 | |||||||
| chr12:47979831 | C | A | 1 | a0002c0001t0002g0106 | 1 | NA18949.hp2 | intron_variant | MODIFIER | c.2679+178G>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 40/53 | chr12 | 47979831 | |||||||
| chr12:47979898 | C | T | 1 | a0001c0027t0001g0228 | 1 | HG02559.hp1 | intron_variant | MODIFIER | c.2679+111G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 40/53 | chr12 | 47979898 | |||||||
| chr12:47979918 | C | T | 1 | a0001c0004t0001g0056 | 2 | NA19077.hp2 NA19091.hp2 |
intron_variant | MODIFIER | c.2679+91G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 40/53 | chr12 | 47979918 | |||||||
| chr12:47979935 | A | AC | 258 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(255): Show |
398 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(395): Show |
intron_variant | MODIFIER | c.2679+73dupG | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 40/53 | chr12 | 47979935 | |||||||
| chr12:47979979 | G | A | 6 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(3): Show |
7 | HG01167.hp2 HG02145.hp2 HG02717.hp1 others(4): Show |
intron_variant | MODIFIER | c.2679+30C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 40/53 | chr12 | 47979979 | |||||||
| chr12:47980156 | G | A | 12 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(9): Show |
14 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(11): Show |
intron_variant | MODIFIER | c.2626-94C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 39/53 | chr12 | 47980156 | |||||||
| chr12:47980160 | A | G | 4 | a0003c0031t0001g0113 a0010c0044t0001g0267 a0011c0051t0001g0192 others(1): Show |
4 | HG01884.hp2 HG02895.hp2 HG03209.hp1 others(1): Show |
intron_variant | MODIFIER | c.2626-98T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 39/53 | chr12 | 47980160 | |||||||
| chr12:47980228 | A | G | 14 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(11): Show |
16 | HG00280.hp2 HG00741.hp1 HG01167.hp2 others(13): Show |
intron_variant | MODIFIER | c.2626-166T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 39/53 | chr12 | 47980228 | |||||||
| chr12:47980245 | T | C | 14 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(11): Show |
16 | HG00280.hp2 HG00741.hp1 HG01167.hp2 others(13): Show |
intron_variant | MODIFIER | c.2626-183A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 39/53 | chr12 | 47980245 | |||||||
| chr12:47980296 | G | A | 2 | a0003c0019t0001g0034 a0003c0019t0001g0112 |
3 | HG02809.hp1 HG03486.hp1 NA19240.hp1 |
intron_variant | MODIFIER | c.2626-234C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 39/53 | chr12 | 47980296 | |||||||
| chr12:47980513 | C | T | 2 | a0011c0051t0001g0192 a0012c0034t0002g0058 |
2 | HG03209.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.2625+41G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 39/53 | chr12 | 47980513 | |||||||
| chr12:47980545 | G | A | 12 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(9): Show |
14 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(11): Show |
intron_variant | MODIFIER | c.2625+9C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 39/53 | chr12 | 47980545 | |||||||
| chr12:47980730 | A | G | 258 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(255): Show |
398 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(395): Show |
intron_variant | MODIFIER | c.2518-69T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 38/53 | chr12 | 47980730 | |||||||
| chr12:47980752 | G | A | 10 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(7): Show |
11 | HG01167.hp2 HG01884.hp2 HG02145.hp2 others(8): Show |
intron_variant | MODIFIER | c.2518-91C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 38/53 | chr12 | 47980752 | |||||||
| chr12:47980833 | T | C | 33 | a0001c0002t0003g0151 a0001c0003t0001g0010 a0001c0003t0001g0041 others(30): Show |
42 | HG00280.hp2 HG00741.hp1 HG01099.hp1 others(39): Show |
intron_variant | MODIFIER | c.2517+82A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 38/53 | chr12 | 47980833 | |||||||
| chr12:47981043 | T | G | 87 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(84): Show |
149 | HG00140.hp1 HG00323.hp1 HG00438.hp1 others(146): Show |
intron_variant | MODIFIER | c.2464-75A>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 37/53 | chr12 | 47981043 | |||||||
| chr12:47981076 | C | T | 1 | a0003c0009t0002g0103 | 1 | HG03579.hp1 | intron_variant | MODIFIER | c.2464-108G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 37/53 | chr12 | 47981076 | |||||||
| chr12:47981149 | A | T | 3 | a0001c0003t0007g0021 a0003c0005t0009g0060 a0003c0005t0009g0105 |
5 | HG02055.hp2 HG03516.hp2 HG03540.hp1 others(2): Show |
intron_variant | MODIFIER | c.2464-181T>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 37/53 | chr12 | 47981149 | |||||||
| chr12:47981475 | G | T | 2 | a0001c0041t0001g0185 a0006c0043t0004g0214 |
2 | HG00280.hp2 HG00741.hp1 |
intron_variant | MODIFIER | c.2410-79C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 36/53 | chr12 | 47981475 | |||||||
| chr12:47981654 | C | CT | 62 | a0001c0026t0004g0231 a0001c0026t0004g0232 a0001c0027t0001g0228 others(59): Show |
109 | HG00280.hp1 HG00280.hp2 HG00323.hp2 others(106): Show |
intron_variant | MODIFIER | c.2409+121dupA | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 36/53 | chr12 | 47981654 | |||||||
| chr12:47981668 | G | A | 7 | a0001c0026t0004g0231 a0001c0026t0004g0232 a0001c0041t0001g0185 others(4): Show |
7 | HG00280.hp2 HG00741.hp1 HG01884.hp1 others(4): Show |
intron_variant | MODIFIER | c.2409+108C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 36/53 | chr12 | 47981668 | |||||||
| chr12:47981692 | C | G | 83 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(80): Show |
146 | HG00140.hp1 HG00323.hp1 HG00438.hp1 others(143): Show |
intron_variant | MODIFIER | c.2409+84G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 36/53 | chr12 | 47981692 | |||||||
| chr12:47981881 | C | T | 1 | a0001c0003t0001g0234 | 1 | HG01346.hp1 | intron_variant | MODIFIER | c.2356-52G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 35/53 | chr12 | 47981881 | |||||||
| chr12:47981885 | C | A | 5 | a0001c0027t0001g0184 a0001c0041t0001g0185 a0003c0016t0001g0114 others(2): Show |
5 | HG00280.hp2 HG00741.hp1 HG02257.hp1 others(2): Show |
intron_variant | MODIFIER | c.2356-56G>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 35/53 | chr12 | 47981885 | |||||||
| chr12:47981891 | G | T | 1 | a0003c0005t0002g0014 | 3 | HG01257.hp2 HG01258.hp1 HG01261.hp1 |
intron_variant | MODIFIER | c.2356-62C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 35/53 | chr12 | 47981891 | |||||||
| chr12:47981919 | C | G | 1 | a0001c0003t0001g0130 | 1 | HG01952.hp1 | intron_variant | MODIFIER | c.2356-90G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 35/53 | chr12 | 47981919 | |||||||
| chr12:47981924 | G | A | 3 | a0001c0003t0001g0183 a0003c0005t0002g0026 a0003c0023t0002g0027 |
5 | HG02572.hp1 HG02886.hp1 HG03209.hp2 others(2): Show |
intron_variant | MODIFIER | c.2356-95C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 35/53 | chr12 | 47981924 | |||||||
| chr12:47982039 | C | T | 7 | a0001c0026t0004g0231 a0001c0026t0004g0232 a0001c0027t0001g0228 others(4): Show |
7 | HG00280.hp2 HG00741.hp1 HG01884.hp1 others(4): Show |
intron_variant | MODIFIER | c.2355+68G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 35/53 | chr12 | 47982039 | |||||||
| chr12:47982047 | C | T | 1 | a0002c0001t0002g0082 | 1 | HG00609.hp1 | intron_variant | MODIFIER | c.2355+60G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 35/53 | chr12 | 47982047 | |||||||
| chr12:47982182 | C | T | 132 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(129): Show |
206 | HG00140.hp1 HG00140.hp2 HG00323.hp1 others(203): Show |
intron_variant | MODIFIER | c.2302-22G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 34/53 | chr12 | 47982182 | |||||||
| chr12:47982192 | A | G | 139 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(136): Show |
215 | HG00140.hp1 HG00140.hp2 HG00323.hp1 others(212): Show |
intron_variant | MODIFIER | c.2302-32T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 34/53 | chr12 | 47982192 | |||||||
| chr12:47982293 | G | A | 7 | a0001c0026t0004g0231 a0001c0026t0004g0232 a0001c0027t0001g0228 others(4): Show |
7 | HG00280.hp2 HG00741.hp1 HG01884.hp1 others(4): Show |
intron_variant | MODIFIER | c.2302-133C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 34/53 | chr12 | 47982293 | |||||||
| chr12:47982354 | G | A | 126 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(123): Show |
201 | HG00140.hp1 HG00140.hp2 HG00323.hp1 others(198): Show |
intron_variant | MODIFIER | c.2301+148C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 34/53 | chr12 | 47982354 | |||||||
| chr12:47982369 | G | A | 1 | a0001c0008t0001g0200 | 1 | NA19240.hp2 | intron_variant | MODIFIER | c.2301+133C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 34/53 | chr12 | 47982369 | |||||||
| chr12:47982430 | G | A | 41 | a0001c0003t0001g0006 a0001c0003t0001g0025 a0001c0003t0001g0052 others(38): Show |
52 | HG00099.hp1 HG00099.hp2 HG00609.hp2 others(49): Show |
intron_variant | MODIFIER | c.2301+72C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 34/53 | chr12 | 47982430 | |||||||
| chr12:47982639 | G | A | 5 | a0001c0027t0001g0184 a0003c0016t0001g0114 a0003c0016t0001g0115 others(2): Show |
6 | HG02257.hp1 HG02809.hp1 HG02896.hp2 others(3): Show |
intron_variant | MODIFIER | c.2194-30C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 33/53 | chr12 | 47982639 | |||||||
| chr12:47982660 | A | AC | 132 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(129): Show |
207 | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(204): Show |
intron_variant | MODIFIER | c.2194-52dupG | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 33/53 | chr12 | 47982660 | |||||||
| chr12:47982664 | A | G | 133 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(130): Show |
208 | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(205): Show |
intron_variant | MODIFIER | c.2194-55T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 33/53 | chr12 | 47982664 | |||||||
| chr12:47982691 | C | A | 15 | a0001c0002t0001g0179 a0001c0002t0001g0249 a0001c0004t0001g0012 others(12): Show |
18 | HG00423.hp2 HG00544.hp1 HG00738.hp2 others(15): Show |
intron_variant | MODIFIER | c.2194-82G>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 33/53 | chr12 | 47982691 | |||||||
| chr12:47982720 | C | T | 133 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(130): Show |
208 | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(205): Show |
intron_variant | MODIFIER | c.2194-111G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 33/53 | chr12 | 47982720 | |||||||
| chr12:47982747 | C | A | 140 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(137): Show |
217 | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(214): Show |
intron_variant | MODIFIER | c.2193+101G>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 33/53 | chr12 | 47982747 | |||||||
| chr12:47982791 | G | A | 7 | a0001c0026t0004g0231 a0001c0026t0004g0232 a0001c0027t0001g0228 others(4): Show |
7 | HG00280.hp2 HG00741.hp1 HG01884.hp1 others(4): Show |
intron_variant | MODIFIER | c.2193+57C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 33/53 | chr12 | 47982791 | |||||||
| chr12:47982816 | C | T | 20 | a0001c0002t0001g0179 a0001c0002t0001g0249 a0001c0004t0001g0012 others(17): Show |
25 | HG00423.hp2 HG00544.hp1 HG00738.hp2 others(22): Show |
intron_variant | MODIFIER | c.2193+32G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 33/53 | chr12 | 47982816 | |||||||
| chr12:47982990 | G | T | 1 | a0003c0005t0002g0098 | 1 | HG01099.hp1 | intron_variant | MODIFIER | c.2095-44C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 32/53 | chr12 | 47982990 | |||||||
| chr12:47983069 | C | T | 1 | a0004c0017t0012g0176 | 1 | HG00621.hp2 | intron_variant | MODIFIER | c.2094+24G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 32/53 | chr12 | 47983069 | |||||||
| chr12:47983081 | C | G | 14 | a0001c0004t0001g0050 a0001c0004t0001g0225 a0001c0004t0001g0226 others(11): Show |
18 | HG01192.hp1 HG02257.hp2 HG02572.hp2 others(15): Show |
intron_variant | MODIFIER | c.2094+12G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 32/53 | chr12 | 47983081 | |||||||
| chr12:47983084 | G | T | 1 | a0002c0001t0002g0108 | 1 | HG01975.hp1 | intron_variant | MODIFIER | c.2094+9C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 32/53 | chr12 | 47983084 | |||||||
| chr12:47983086 | T | C | 2 | a0001c0027t0001g0228 a0001c0041t0001g0185 |
2 | HG00741.hp1 HG02559.hp1 |
splice_region_variant&intron_variant | LOW | c.2094+7A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 32/53 | chr12 | 47983086 | |||||||
| chr12:47983181 | A | T | 1 | a0002c0001t0002g0079 | 1 | HG03834.hp2 | intron_variant | MODIFIER | c.2050-44T>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 31/53 | chr12 | 47983181 | |||||||
| chr12:47983186 | C | A | 31 | a0001c0003t0001g0006 a0001c0003t0001g0025 a0001c0003t0001g0052 others(28): Show |
39 | HG00099.hp1 HG00099.hp2 HG00609.hp2 others(36): Show |
intron_variant | MODIFIER | c.2050-49G>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 31/53 | chr12 | 47983186 | |||||||
| chr12:47983448 | G | A | 1 | a0001c0002t0001g0249 | 1 | HG02071.hp2 | intron_variant | MODIFIER | c.1996-10C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 30/53 | chr12 | 47983448 | |||||||
| chr12:47983533 | C | T | 1 | a0001c0002t0001g0155 | 1 | NA18972.hp2 | intron_variant | MODIFIER | c.1996-95G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 30/53 | chr12 | 47983533 | |||||||
| chr12:47983572 | G | A | 1 | a0001c0002t0001g0160 | 1 | HG01175.hp1 | intron_variant | MODIFIER | c.1995+111C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 30/53 | chr12 | 47983572 | |||||||
| chr12:47983593 | G | A | 1 | a0002c0001t0002g0082 | 1 | HG00609.hp1 | intron_variant | MODIFIER | c.1995+90C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 30/53 | chr12 | 47983593 | |||||||
| chr12:47983852 | A | G | 2 | a0001c0027t0001g0228 a0001c0041t0001g0185 |
2 | HG00741.hp1 HG02559.hp1 |
intron_variant | MODIFIER | c.1942-116T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 29/53 | chr12 | 47983852 | |||||||
| chr12:47983870 | T | A | 20 | a0001c0002t0001g0179 a0001c0002t0001g0249 a0001c0004t0001g0012 others(17): Show |
25 | HG00423.hp2 HG00544.hp1 HG00738.hp2 others(22): Show |
intron_variant | MODIFIER | c.1942-134A>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 29/53 | chr12 | 47983870 | |||||||
| chr12:47983935 | T | C | 1 | a0001c0041t0001g0185 | 1 | HG00741.hp1 | intron_variant | MODIFIER | c.1941+152A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 29/53 | chr12 | 47983935 | |||||||
| chr12:47983973 | T | C | 1 | a0001c0041t0001g0185 | 1 | HG00741.hp1 | intron_variant | MODIFIER | c.1941+114A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 29/53 | chr12 | 47983973 | |||||||
| chr12:47984164 | G | T | 1 | a0001c0041t0001g0185 | 1 | HG00741.hp1 | intron_variant | MODIFIER | c.1888-24C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 28/53 | chr12 | 47984164 | |||||||
| chr12:47984174 | C | T | 4 | a0001c0026t0004g0231 a0001c0026t0004g0232 a0001c0042t0001g0182 others(1): Show |
4 | HG01884.hp1 HG02258.hp1 HG02965.hp2 others(1): Show |
intron_variant | MODIFIER | c.1888-34G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 28/53 | chr12 | 47984174 | |||||||
| chr12:47984175 | G | A | 1 | a0001c0003t0001g0202 | 1 | NA20129.hp2 | intron_variant | MODIFIER | c.1888-35C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 28/53 | chr12 | 47984175 | |||||||
| chr12:47984187 | A | G | 183 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(180): Show |
270 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(267): Show |
intron_variant | MODIFIER | c.1888-47T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 28/53 | chr12 | 47984187 | |||||||
| chr12:47984248 | G | A | 1 | a0003c0031t0001g0113 | 1 | HG01884.hp2 | intron_variant | MODIFIER | c.1888-108C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 28/53 | chr12 | 47984248 | |||||||
| chr12:47984453 | T | A | 1 | a0002c0001t0001g0122 | 1 | NA18978.hp1 | intron_variant | MODIFIER | c.1887+93A>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 28/53 | chr12 | 47984453 | |||||||
| chr12:47984649 | T | C | 2 | a0011c0051t0001g0192 a0012c0034t0002g0058 |
2 | HG03209.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.1834-50A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 27/53 | chr12 | 47984649 | |||||||
| chr12:47984878 | G | C | 1 | a0001c0002t0001g0147 | 1 | HG01255.hp2 | intron_variant | MODIFIER | c.1833+117C>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 27/53 | chr12 | 47984878 | |||||||
| chr12:47985117 | A | G | 2 | a0001c0003t0001g0134 a0001c0041t0001g0185 |
2 | HG00741.hp1 HG02622.hp1 |
intron_variant | MODIFIER | c.1735-24T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 26/53 | chr12 | 47985117 | |||||||
| chr12:47985136 | C | T | 1 | a0001c0003t0007g0021 | 3 | HG03516.hp2 HG03540.hp1 HG03579.hp2 |
intron_variant | MODIFIER | c.1735-43G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 26/53 | chr12 | 47985136 | |||||||
| chr12:47985150 | C | G | 7 | a0001c0003t0001g0134 a0001c0014t0001g0043 a0001c0014t0001g0190 others(4): Show |
8 | HG00741.hp1 HG01167.hp2 HG02145.hp2 others(5): Show |
intron_variant | MODIFIER | c.1735-57G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 26/53 | chr12 | 47985150 | |||||||
| chr12:47985247 | C | T | 1 | a0004c0007t0001g0143 | 1 | NA18988.hp1 | intron_variant | MODIFIER | c.1735-154G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 26/53 | chr12 | 47985247 | |||||||
| chr12:47985248 | T | A | 1 | a0004c0007t0001g0143 | 1 | NA18988.hp1 | intron_variant | MODIFIER | c.1735-155A>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 26/53 | chr12 | 47985248 | |||||||
| chr12:47985249 | A | C | 1 | a0004c0007t0001g0143 | 1 | NA18988.hp1 | intron_variant | MODIFIER | c.1735-156T>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 26/53 | chr12 | 47985249 | |||||||
| chr12:47985253 | C | G | 3 | a0001c0003t0001g0261 a0001c0003t0001g0262 a0001c0003t0001g0266 |
3 | NA19060.hp2 NA19083.hp2 NA19085.hp1 |
intron_variant | MODIFIER | c.1735-160G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 26/53 | chr12 | 47985253 | |||||||
| chr12:47985299 | G | A | 4 | a0001c0003t0001g0227 a0001c0027t0001g0228 a0003c0031t0001g0113 others(1): Show |
4 | HG01884.hp2 HG02559.hp1 HG02895.hp2 others(1): Show |
intron_variant | MODIFIER | c.1735-206C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 26/53 | chr12 | 47985299 | |||||||
| chr12:47985610 | G | A | 1 | a0012c0034t0002g0058 | 1 | NA18522.hp1 | intron_variant | MODIFIER | c.1681-23C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 25/53 | chr12 | 47985610 | |||||||
| chr12:47985625 | C | T | 1 | a0001c0041t0001g0185 | 1 | HG00741.hp1 | intron_variant | MODIFIER | c.1681-38G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 25/53 | chr12 | 47985625 | |||||||
| chr12:47985711 | G | A | 4 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(1): Show |
5 | HG01167.hp2 HG02145.hp2 HG02818.hp1 others(2): Show |
intron_variant | MODIFIER | c.1680+17C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 25/53 | chr12 | 47985711 | |||||||
| chr12:47986027 | G | A | 120 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(117): Show |
188 | HG00140.hp1 HG00323.hp1 HG00408.hp1 others(185): Show |
intron_variant | MODIFIER | c.1528-62C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 23/53 | chr12 | 47986027 | |||||||
| chr12:47986073 | T | C | 143 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(140): Show |
225 | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(222): Show |
intron_variant | MODIFIER | c.1528-108A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 23/53 | chr12 | 47986073 | |||||||
| chr12:47986121 | CG | C | 3 | a0001c0026t0004g0231 a0001c0026t0004g0232 a0003c0005t0002g0098 |
3 | HG01099.hp1 HG02258.hp1 HG03453.hp1 |
intron_variant | MODIFIER | c.1528-157delC | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 23/53 | chr12 | 47986121 | |||||||
| chr12:47986178 | A | C | 137 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(134): Show |
218 | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(215): Show |
intron_variant | MODIFIER | c.1527+158T>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 23/53 | chr12 | 47986178 | |||||||
| chr12:47986181 | A | G | 137 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(134): Show |
218 | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(215): Show |
intron_variant | MODIFIER | c.1527+155T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 23/53 | chr12 | 47986181 | |||||||
| chr12:47986203 | C | T | 2 | a0008c0022t0008g0075 a0008c0022t0008g0101 |
2 | NA18942.hp2 NA19057.hp2 |
intron_variant | MODIFIER | c.1527+133G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 23/53 | chr12 | 47986203 | |||||||
| chr12:47986216 | G | A | 1 | a0001c0003t0001g0244 | 1 | HG02683.hp2 | intron_variant | MODIFIER | c.1527+120C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 23/53 | chr12 | 47986216 | |||||||
| chr12:47986248 | A | G | 138 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(135): Show |
220 | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(217): Show |
intron_variant | MODIFIER | c.1527+88T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 23/53 | chr12 | 47986248 | |||||||
| chr12:47986264 | C | T | 2 | a0001c0006t0001g0205 a0001c0006t0006g0206 |
2 | NA18953.hp1 NA19058.hp1 |
intron_variant | MODIFIER | c.1527+72G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 23/53 | chr12 | 47986264 | |||||||
| chr12:47986291 | C | T | 1 | a0002c0001t0001g0121 | 1 | HG00673.hp2 | intron_variant | MODIFIER | c.1527+45G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 23/53 | chr12 | 47986291 | |||||||
| chr12:47986292 | G | A | 2 | a0003c0016t0001g0114 a0003c0016t0001g0115 |
2 | HG02257.hp1 HG02896.hp2 |
intron_variant | MODIFIER | c.1527+44C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 23/53 | chr12 | 47986292 | |||||||
| chr12:47986496 | C | T | 1 | a0001c0014t0001g0219 | 1 | HG02145.hp2 | intron_variant | MODIFIER | c.1420-53G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 22/53 | chr12 | 47986496 | |||||||
| chr12:47986548 | T | TG | 35 | a0001c0003t0001g0006 a0001c0003t0001g0025 a0001c0003t0001g0052 others(32): Show |
44 | HG00099.hp1 HG00099.hp2 HG00609.hp2 others(41): Show |
intron_variant | MODIFIER | c.1420-106dupC | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 22/53 | chr12 | 47986548 | |||||||
| chr12:47986550 | G | C | 1 | a0004c0010t0001g0037 | 2 | NA18966.hp2 NA19007.hp2 |
intron_variant | MODIFIER | c.1420-107C>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 22/53 | chr12 | 47986550 | |||||||
| chr12:47986553 | G | C | 3 | a0001c0003t0001g0227 a0001c0027t0001g0228 a0004c0010t0001g0162 |
3 | HG02083.hp2 HG02559.hp1 HG03516.hp1 |
intron_variant | MODIFIER | c.1420-110C>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 22/53 | chr12 | 47986553 | |||||||
| chr12:47986556 | G | A | 1 | a0002c0001t0010g0089 | 1 | NA18960.hp1 | intron_variant | MODIFIER | c.1420-113C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 22/53 | chr12 | 47986556 | |||||||
| chr12:47986556 | G | T | 1 | a0001c0002t0001g0167 | 1 | HG02155.hp2 | intron_variant | MODIFIER | c.1420-113C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 22/53 | chr12 | 47986556 | |||||||
| chr12:47986899 | G | A | 61 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(58): Show |
98 | HG00140.hp1 HG00323.hp1 HG00408.hp1 others(95): Show |
intron_variant | MODIFIER | c.1366-11C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 21/53 | chr12 | 47986899 | |||||||
| chr12:47986901 | G | T | 1 | a0001c0003t0001g0234 | 1 | HG01346.hp1 | intron_variant | MODIFIER | c.1366-13C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 21/53 | chr12 | 47986901 | |||||||
| chr12:47986967 | C | T | 1 | a0002c0001t0002g0091 | 1 | HG02293.hp1 | intron_variant | MODIFIER | c.1366-79G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 21/53 | chr12 | 47986967 | |||||||
| chr12:47986982 | G | A | 1 | a0001c0004t0001g0251 | 1 | NA18943.hp2 | intron_variant | MODIFIER | c.1366-94C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 21/53 | chr12 | 47986982 | |||||||
| chr12:47987031 | GACTCCAG others(7): Show |
G | 1 | a0001c0003t0001g0183 | 1 | HG02886.hp1 | intron_variant | MODIFIER | c.1365+33_1365+46del others(14): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 21/53 | chr12 | 47987031 | |||||||
| chr12:47987249 | AG | A | 3 | a0001c0004t0001g0023 a0001c0004t0001g0217 a0001c0004t0001g0218 |
5 | NA18952.hp1 NA18985.hp1 NA18999.hp1 others(2): Show |
intron_variant | MODIFIER | c.1266+19delC | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 20/53 | chr12 | 47987249 | |||||||
| chr12:47987262 | C | T | 3 | a0001c0002t0001g0039 a0001c0002t0001g0163 a0001c0002t0001g0173 |
4 | HG00323.hp1 HG03704.hp1 HG03942.hp1 others(1): Show |
splice_region_variant&intron_variant | LOW | c.1266+7G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 20/53 | chr12 | 47987262 | |||||||
| chr12:47987591 | C | G | 2 | a0011c0051t0001g0192 a0012c0034t0002g0058 |
2 | HG03209.hp1 NA18522.hp1 |
intron_variant | MODIFIER | c.1221+20G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 19/53 | chr12 | 47987591 | |||||||
| chr12:47987865 | C | T | 1 | a0001c0027t0001g0184 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.1123-156G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 18/53 | chr12 | 47987865 | |||||||
| chr12:47987870 | C | T | 3 | a0001c0003t0001g0227 a0001c0027t0001g0228 a0003c0031t0001g0113 |
3 | HG01884.hp2 HG02559.hp1 HG03516.hp1 |
intron_variant | MODIFIER | c.1123-161G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 18/53 | chr12 | 47987870 | |||||||
| chr12:47987928 | T | C | 1 | a0002c0001t0002g0090 | 1 | HG01993.hp1 | intron_variant | MODIFIER | c.1123-219A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 18/53 | chr12 | 47987928 | |||||||
| chr12:47987965 | C | T | 1 | a0009c0028t0002g0057 | 1 | HG02165.hp1 | intron_variant | MODIFIER | c.1123-256G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 18/53 | chr12 | 47987965 | |||||||
| chr12:47987973 | G | C | 65 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(62): Show |
104 | HG00140.hp1 HG00323.hp1 HG00408.hp1 others(101): Show |
intron_variant | MODIFIER | c.1123-264C>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 18/53 | chr12 | 47987973 | |||||||
| chr12:47988044 | G | A | 5 | a0001c0014t0001g0043 a0001c0014t0001g0190 a0001c0014t0001g0219 others(2): Show |
6 | HG01167.hp2 HG02145.hp2 HG02818.hp1 others(3): Show |
intron_variant | MODIFIER | c.1123-335C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 18/53 | chr12 | 47988044 | |||||||
| chr12:47988050 | G | T | 1 | a0002c0001t0002g0077 | 1 | NA19085.hp2 | intron_variant | MODIFIER | c.1123-341C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 18/53 | chr12 | 47988050 | |||||||
| chr12:47988192 | G | A | 4 | a0003c0016t0001g0114 a0003c0016t0001g0115 a0003c0019t0001g0034 others(1): Show |
5 | HG02257.hp1 HG02809.hp1 HG02896.hp2 others(2): Show |
intron_variant | MODIFIER | c.1123-483C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 18/53 | chr12 | 47988192 | |||||||
| chr12:47988313 | G | A | 5 | a0001c0003t0001g0227 a0001c0027t0001g0184 a0001c0027t0001g0228 others(2): Show |
5 | HG01884.hp2 HG02559.hp1 HG02895.hp2 others(2): Show |
intron_variant | MODIFIER | c.1123-604C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 18/53 | chr12 | 47988313 | |||||||
| chr12:47988317 | G | A | 14 | a0001c0002t0001g0039 a0001c0002t0001g0163 a0001c0002t0001g0164 others(11): Show |
17 | HG00323.hp1 HG00408.hp1 HG01433.hp1 others(14): Show |
intron_variant | MODIFIER | c.1123-608C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 18/53 | chr12 | 47988317 | |||||||
| chr12:47988429 | G | A | 1 | a0001c0027t0001g0228 | 1 | HG02559.hp1 | intron_variant | MODIFIER | c.1123-720C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 18/53 | chr12 | 47988429 | |||||||
| chr12:47988499 | A | C | 137 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(134): Show |
220 | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(217): Show |
intron_variant | MODIFIER | c.1122+729T>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 18/53 | chr12 | 47988499 | |||||||
| chr12:47988674 | A | G | 1 | a0001c0041t0001g0185 | 1 | HG00741.hp1 | intron_variant | MODIFIER | c.1122+554T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 18/53 | chr12 | 47988674 | |||||||
| chr12:47988694 | G | T | 60 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(57): Show |
97 | HG00140.hp1 HG00323.hp1 HG00408.hp1 others(94): Show |
intron_variant | MODIFIER | c.1122+534C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 18/53 | chr12 | 47988694 | |||||||
| chr12:47988790 | G | C | 35 | a0001c0003t0001g0006 a0001c0003t0001g0025 a0001c0003t0001g0052 others(32): Show |
45 | HG00099.hp1 HG00099.hp2 HG00609.hp2 others(42): Show |
intron_variant | MODIFIER | c.1122+438C>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 18/53 | chr12 | 47988790 | |||||||
| chr12:47988815 | C | T | 4 | a0001c0003t0003g0193 a0001c0003t0003g0194 a0001c0003t0003g0195 others(1): Show |
4 | HG02922.hp1 HG02970.hp1 HG03209.hp1 others(1): Show |
intron_variant | MODIFIER | c.1122+413G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 18/53 | chr12 | 47988815 | |||||||
| chr12:47988860 | G | A | 1 | a0001c0004t0001g0226 | 1 | HG03098.hp2 | intron_variant | MODIFIER | c.1122+368C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 18/53 | chr12 | 47988860 | |||||||
| chr12:47988940 | T | G | 1 | a0001c0004t0001g0045 | 2 | HG00639.hp2 HG03669.hp2 |
intron_variant | MODIFIER | c.1122+288A>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 18/53 | chr12 | 47988940 | |||||||
| chr12:47989145 | T | C | 1 | a0002c0001t0002g0091 | 1 | HG02293.hp1 | intron_variant | MODIFIER | c.1122+83A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 18/53 | chr12 | 47989145 | |||||||
| chr12:47989338 | G | A | 1 | a0010c0044t0001g0267 | 1 | HG02895.hp2 | intron_variant | MODIFIER | c.1069-57C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 17/53 | chr12 | 47989338 | |||||||
| chr12:47989452 | A | G | 136 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(133): Show |
219 | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(216): Show |
intron_variant | MODIFIER | c.1069-171T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 17/53 | chr12 | 47989452 | |||||||
| chr12:47989502 | G | A | 2 | a0003c0019t0001g0034 a0003c0019t0001g0112 |
3 | HG02809.hp1 HG03486.hp1 NA19240.hp1 |
intron_variant | MODIFIER | c.1069-221C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 17/53 | chr12 | 47989502 | |||||||
| chr12:47989519 | T | C | 1 | a0001c0002t0001g0170 | 1 | HG00597.hp1 | intron_variant | MODIFIER | c.1069-238A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 17/53 | chr12 | 47989519 | |||||||
| chr12:47989605 | T | C | 1 | a0003c0005t0002g0092 | 1 | HG02630.hp2 | intron_variant | MODIFIER | c.1068+156A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 17/53 | chr12 | 47989605 | |||||||
| chr12:47989710 | C | T | 4 | a0001c0003t0001g0010 a0001c0003t0001g0189 a0001c0003t0001g0202 others(1): Show |
7 | HG02280.hp1 HG02895.hp1 HG02896.hp1 others(4): Show |
intron_variant | MODIFIER | c.1068+51G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 17/53 | chr12 | 47989710 | |||||||
| chr12:47989835 | G | A | 1 | a0003c0012t0002g0070 | 1 | HG02258.hp2 | intron_variant | MODIFIER | c.1024-30C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47989835 | |||||||
| chr12:47989855 | G | A | 1 | a0012c0034t0002g0058 | 1 | NA18522.hp1 | intron_variant | MODIFIER | c.1024-50C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47989855 | |||||||
| chr12:47989914 | C | A | 1 | a0001c0003t0001g0248 | 1 | HG03239.hp1 | intron_variant | MODIFIER | c.1024-109G>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47989914 | |||||||
| chr12:47990006 | CT | C | 144 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(141): Show |
229 | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(226): Show |
intron_variant | MODIFIER | c.1024-202delA | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47990006 | |||||||
| chr12:47990014 | G | T | 42 | a0001c0003t0001g0006 a0001c0003t0001g0052 a0001c0003t0001g0129 others(39): Show |
52 | HG00099.hp1 HG00099.hp2 HG00609.hp2 others(49): Show |
intron_variant | MODIFIER | c.1024-209C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47990014 | |||||||
| chr12:47990026 | G | T | 4 | a0001c0003t0003g0193 a0001c0003t0003g0194 a0001c0003t0003g0195 others(1): Show |
4 | HG02922.hp1 HG02970.hp1 HG03209.hp1 others(1): Show |
intron_variant | MODIFIER | c.1024-221C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47990026 | |||||||
| chr12:47990031 | G | A | 28 | a0001c0003t0001g0006 a0001c0003t0001g0052 a0001c0003t0001g0129 others(25): Show |
36 | HG00099.hp1 HG00099.hp2 HG00609.hp2 others(33): Show |
intron_variant | MODIFIER | c.1024-226C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47990031 | |||||||
| chr12:47990069 | C | T | 1 | a0012c0034t0002g0058 | 1 | NA18522.hp1 | intron_variant | MODIFIER | c.1024-264G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47990069 | |||||||
| chr12:47990170 | T | A | 144 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(141): Show |
229 | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(226): Show |
intron_variant | MODIFIER | c.1024-365A>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47990170 | |||||||
| chr12:47990339 | T | C | 144 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(141): Show |
229 | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(226): Show |
intron_variant | MODIFIER | c.1024-534A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47990339 | |||||||
| chr12:47990653 | C | T | 61 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(58): Show |
98 | HG00140.hp1 HG00323.hp1 HG00408.hp1 others(95): Show |
intron_variant | MODIFIER | c.1024-848G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47990653 | |||||||
| chr12:47990665 | CA | C | 4 | a0001c0003t0003g0193 a0001c0003t0003g0194 a0001c0003t0003g0195 others(1): Show |
4 | HG02922.hp1 HG02970.hp1 HG03209.hp1 others(1): Show |
intron_variant | MODIFIER | c.1024-861delT | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47990665 | |||||||
| chr12:47990721 | G | T | 1 | a0001c0002t0001g0154 | 1 | NA19065.hp1 | intron_variant | MODIFIER | c.1024-916C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47990721 | |||||||
| chr12:47990742 | G | A | 5 | a0003c0005t0001g0126 a0003c0013t0001g0035 a0003c0013t0001g0118 others(2): Show |
6 | HG00408.hp1 NA18966.hp1 NA18997.hp1 others(3): Show |
intron_variant | MODIFIER | c.1024-937C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47990742 | |||||||
| chr12:47990771 | T | C | 1 | a0003c0016t0002g0093 | 1 | NA19007.hp1 | intron_variant | MODIFIER | c.1024-966A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47990771 | |||||||
| chr12:47990797 | A | G | 3 | a0001c0003t0001g0041 a0001c0003t0001g0230 a0001c0038t0001g0196 |
4 | HG02630.hp1 HG03195.hp1 HG03540.hp2 others(1): Show |
intron_variant | MODIFIER | c.1024-992T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47990797 | |||||||
| chr12:47990932 | C | G | 1 | a0001c0027t0001g0184 | 1 | NA19043.hp1 | intron_variant | MODIFIER | c.1024-1127G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47990932 | |||||||
| chr12:47991039 | A | T | 1 | a0001c0004t0001g0254 | 1 | HG03927.hp1 | intron_variant | MODIFIER | c.1024-1234T>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47991039 | |||||||
| chr12:47991062 | G | A | 3 | a0003c0012t0002g0029 a0008c0022t0008g0075 a0008c0022t0008g0101 |
4 | HG02602.hp2 HG03688.hp2 NA18942.hp2 others(1): Show |
intron_variant | MODIFIER | c.1024-1257C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47991062 | |||||||
| chr12:47991133 | C | T | 6 | a0001c0003t0001g0227 a0001c0027t0001g0184 a0001c0027t0001g0228 others(3): Show |
6 | HG01884.hp2 HG02257.hp1 HG02559.hp1 others(3): Show |
intron_variant | MODIFIER | c.1024-1328G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47991133 | |||||||
| chr12:47991161 | A | T | 186 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(183): Show |
281 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(278): Show |
intron_variant | MODIFIER | c.1024-1356T>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47991161 | |||||||
| chr12:47991346 | C | T | 1 | a0005c0011t0001g0178 | 1 | HG01081.hp1 | intron_variant | MODIFIER | c.1023+1532G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47991346 | |||||||
| chr12:47991793 | A | G | 191 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(188): Show |
286 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(283): Show |
intron_variant | MODIFIER | c.1023+1085T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47991793 | |||||||
| chr12:47991839 | GCTCTCTA others(5): Show |
G | 2 | a0004c0010t0001g0049 a0004c0010t0001g0223 |
3 | NA19010.hp1 NA19055.hp1 NA19083.hp1 |
intron_variant | MODIFIER | c.1023+1027_1023+103 others(16): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47991839 | |||||||
| chr12:47991903 | A | AG | 22 | a0001c0002t0001g0249 a0001c0003t0001g0025 a0001c0003t0001g0252 others(19): Show |
29 | HG00423.hp2 HG00544.hp1 HG00738.hp2 others(26): Show |
intron_variant | MODIFIER | c.1023+974dupC | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47991903 | |||||||
| chr12:47991906 | G | T | 1 | a0004c0007t0001g0247 | 1 | HG04115.hp1 | intron_variant | MODIFIER | c.1023+972C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47991906 | |||||||
| chr12:47991912 | G | A | 1 | a0001c0041t0001g0185 | 1 | HG00741.hp1 | intron_variant | MODIFIER | c.1023+966C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47991912 | |||||||
| chr12:47992088 | A | G | 5 | a0001c0003t0001g0227 a0001c0027t0001g0228 a0003c0016t0001g0114 others(2): Show |
5 | HG01884.hp2 HG02257.hp1 HG02559.hp1 others(2): Show |
intron_variant | MODIFIER | c.1023+790T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47992088 | |||||||
| chr12:47992112 | T | A | 2 | a0002c0001t0002g0071 a0002c0001t0002g0094 |
2 | NA18953.hp2 NA18968.hp2 |
intron_variant | MODIFIER | c.1023+766A>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47992112 | |||||||
| chr12:47992123 | G | A | 1 | a0003c0023t0002g0027 | 2 | NA19030.hp2 NA19043.hp2 |
intron_variant | MODIFIER | c.1023+755C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47992123 | |||||||
| chr12:47992162 | A | G | 187 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(184): Show |
282 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(279): Show |
intron_variant | MODIFIER | c.1023+716T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47992162 | |||||||
| chr12:47992277 | T | C | 147 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(144): Show |
233 | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(230): Show |
intron_variant | MODIFIER | c.1023+601A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47992277 | |||||||
| chr12:47992378 | T | C | 1 | a0004c0007t0001g0247 | 1 | HG04115.hp1 | intron_variant | MODIFIER | c.1023+500A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47992378 | |||||||
| chr12:47992458 | A | G | 172 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(169): Show |
264 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(261): Show |
intron_variant | MODIFIER | c.1023+420T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47992458 | |||||||
| chr12:47992549 | C | A | 1 | a0001c0003t0003g0195 | 1 | HG02922.hp1 | intron_variant | MODIFIER | c.1023+329G>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47992549 | |||||||
| chr12:47992673 | C | G | 1 | a0003c0009t0002g0103 | 1 | HG03579.hp1 | intron_variant | MODIFIER | c.1023+205G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47992673 | |||||||
| chr12:47992677 | C | T | 1 | a0003c0013t0001g0124 | 1 | NA19009.hp1 | intron_variant | MODIFIER | c.1023+201G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47992677 | |||||||
| chr12:47992770 | A | G | 172 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(169): Show |
264 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(261): Show |
intron_variant | MODIFIER | c.1023+108T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47992770 | |||||||
| chr12:47992785 | C | T | 1 | a0001c0041t0001g0185 | 1 | HG00741.hp1 | intron_variant | MODIFIER | c.1023+93G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47992785 | |||||||
| chr12:47992794 | G | T | 172 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(169): Show |
264 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(261): Show |
intron_variant | MODIFIER | c.1023+84C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 16/53 | chr12 | 47992794 | |||||||
| chr12:47992938 | C | T | 1 | a0002c0001t0002g0107 | 1 | NA18986.hp1 | splice_region_variant&intron_variant | LOW | c.970-7G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 15/53 | chr12 | 47992938 | |||||||
| chr12:47992991 | A | C | 1 | a0007c0024t0002g0076 | 1 | NA18964.hp1 | intron_variant | MODIFIER | c.970-60T>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 15/53 | chr12 | 47992991 | |||||||
| chr12:47993136 | A | G | 60 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(57): Show |
97 | HG00140.hp1 HG00323.hp1 HG00408.hp1 others(94): Show |
intron_variant | MODIFIER | c.970-205T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 15/53 | chr12 | 47993136 | |||||||
| chr12:47993242 | T | A | 172 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(169): Show |
264 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(261): Show |
intron_variant | MODIFIER | c.969+216A>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 15/53 | chr12 | 47993242 | |||||||
| chr12:47993269 | A | C | 172 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(169): Show |
264 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(261): Show |
intron_variant | MODIFIER | c.969+189T>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 15/53 | chr12 | 47993269 | |||||||
| chr12:47993274 | G | C | 145 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(142): Show |
230 | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(227): Show |
intron_variant | MODIFIER | c.969+184C>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 15/53 | chr12 | 47993274 | |||||||
| chr12:47993322 | T | C | 1 | a0001c0003t0001g0245 | 1 | HG03017.hp2 | intron_variant | MODIFIER | c.969+136A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 15/53 | chr12 | 47993322 | |||||||
| chr12:47993551 | G | T | 1 | a0012c0034t0002g0058 | 1 | NA18522.hp1 | intron_variant | MODIFIER | c.925-49C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 14/53 | chr12 | 47993551 | |||||||
| chr12:47993668 | C | T | 1 | a0001c0002t0001g0153 | 1 | NA19084.hp1 | intron_variant | MODIFIER | c.924+141G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 14/53 | chr12 | 47993668 | |||||||
| chr12:47993908 | A | G | 1 | a0001c0042t0001g0182 | 1 | HG01884.hp1 | intron_variant | MODIFIER | c.871-46T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 13/53 | chr12 | 47993908 | |||||||
| chr12:47993931 | C | G | 1 | a0001c0004t0001g0265 | 1 | HG02723.hp1 | intron_variant | MODIFIER | c.870+63G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 13/53 | chr12 | 47993931 | |||||||
| chr12:47993972 | C | A | 1 | a0001c0004t0001g0265 | 1 | HG02723.hp1 | intron_variant | MODIFIER | c.870+22G>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 13/53 | chr12 | 47993972 | |||||||
| chr12:47994176 | G | T | 2 | a0001c0003t0001g0134 a0001c0003t0001g0183 |
2 | HG02622.hp1 HG02886.hp1 |
intron_variant | MODIFIER | c.817-129C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 12/53 | chr12 | 47994176 | |||||||
| chr12:47994319 | G | A | 13 | a0001c0004t0001g0225 a0001c0014t0001g0043 a0001c0014t0001g0190 others(10): Show |
16 | HG00741.hp1 HG01167.hp2 HG01346.hp2 others(13): Show |
intron_variant | MODIFIER | c.816+105C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 12/53 | chr12 | 47994319 | |||||||
| chr12:47994367 | G | A | 2 | a0003c0009t0002g0028 a0003c0009t0002g0103 |
3 | HG01346.hp2 HG03098.hp1 HG03579.hp1 |
intron_variant | MODIFIER | c.816+57C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 12/53 | chr12 | 47994367 | |||||||
| chr12:47994385 | C | A | 1 | a0001c0039t0001g0246 | 1 | HG01106.hp1 | intron_variant | MODIFIER | c.816+39G>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 12/53 | chr12 | 47994385 | |||||||
| chr12:47994699 | C | T | 12 | a0001c0003t0001g0208 a0001c0006t0001g0003 a0001c0006t0001g0042 others(9): Show |
28 | HG00621.hp1 HG02040.hp1 HG02074.hp1 others(25): Show |
intron_variant | MODIFIER | c.763-222G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 11/53 | chr12 | 47994699 | |||||||
| chr12:47994709 | A | G | 1 | a0001c0002t0001g0054 | 2 | HG00673.hp1 NA18971.hp2 |
intron_variant | MODIFIER | c.763-232T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 11/53 | chr12 | 47994709 | |||||||
| chr12:47994829 | T | C | 106 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(103): Show |
156 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(153): Show |
intron_variant | MODIFIER | c.763-352A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 11/53 | chr12 | 47994829 | |||||||
| chr12:47994846 | C | T | 3 | a0003c0012t0002g0029 a0008c0022t0008g0075 a0008c0022t0008g0101 |
4 | HG02602.hp2 HG03688.hp2 NA18942.hp2 others(1): Show |
intron_variant | MODIFIER | c.763-369G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 11/53 | chr12 | 47994846 | |||||||
| chr12:47994847 | G | T | 5 | a0001c0002t0001g0149 a0001c0002t0001g0150 a0001c0002t0003g0151 others(2): Show |
7 | HG02486.hp1 HG02809.hp2 HG02976.hp1 others(4): Show |
intron_variant | MODIFIER | c.763-370C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 11/53 | chr12 | 47994847 | |||||||
| chr12:47995047 | C | T | 101 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(98): Show |
150 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(147): Show |
intron_variant | MODIFIER | c.762+208G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 11/53 | chr12 | 47995047 | |||||||
| chr12:47995073 | A | C | 101 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(98): Show |
150 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(147): Show |
intron_variant | MODIFIER | c.762+182T>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 11/53 | chr12 | 47995073 | |||||||
| chr12:47995212 | TC | T | 65 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(62): Show |
105 | HG00140.hp1 HG00323.hp1 HG00408.hp2 others(102): Show |
intron_variant | MODIFIER | c.762+42delG | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 11/53 | chr12 | 47995212 | |||||||
| chr12:47995240 | C | T | 25 | a0001c0003t0001g0006 a0001c0003t0001g0052 a0001c0003t0001g0129 others(22): Show |
31 | HG00099.hp1 HG00099.hp2 HG00609.hp2 others(28): Show |
intron_variant | MODIFIER | c.762+15G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 11/53 | chr12 | 47995240 | |||||||
| chr12:47995376 | T | C | 1 | a0001c0002t0001g0147 | 1 | HG01255.hp2 | intron_variant | MODIFIER | c.709-68A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 10/53 | chr12 | 47995376 | |||||||
| chr12:47995449 | G | C | 1 | a0001c0041t0001g0185 | 1 | HG00741.hp1 | intron_variant | MODIFIER | c.709-141C>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 10/53 | chr12 | 47995449 | |||||||
| chr12:47995462 | C | T | 54 | a0001c0003t0001g0010 a0001c0003t0001g0041 a0001c0003t0001g0187 others(51): Show |
89 | HG00140.hp2 HG00280.hp2 HG00621.hp1 others(86): Show |
intron_variant | MODIFIER | c.709-154G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 10/53 | chr12 | 47995462 | |||||||
| chr12:47995470 | A | T | 1 | a0002c0001t0002g0074 | 1 | NA18997.hp2 | intron_variant | MODIFIER | c.709-162T>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 10/53 | chr12 | 47995470 | |||||||
| chr12:47995550 | C | G | 41 | a0001c0003t0001g0208 a0001c0004t0001g0011 a0001c0004t0001g0022 others(38): Show |
71 | HG00140.hp2 HG00280.hp2 HG00621.hp1 others(68): Show |
intron_variant | MODIFIER | c.708+160G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 10/53 | chr12 | 47995550 | |||||||
| chr12:47995702 | G | A | 3 | a0001c0008t0001g0203 a0001c0008t0001g0221 a0001c0050t0001g0204 |
3 | HG02622.hp2 HG02970.hp2 HG03041.hp1 |
splice_region_variant&intron_variant | LOW | c.708+8C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 10/53 | chr12 | 47995702 | |||||||
| chr12:47995839 | G | A | 1 | a0001c0002t0001g0039 | 2 | HG03704.hp1 HG03942.hp1 |
intron_variant | MODIFIER | c.654+36C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 9/53 | chr12 | 47995839 | |||||||
| chr12:47995860 | A | C | 171 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(168): Show |
258 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(255): Show |
intron_variant | MODIFIER | c.654+15T>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 9/53 | chr12 | 47995860 | |||||||
| chr12:47995926 | C | T | 3 | a0001c0003t0007g0021 a0001c0027t0001g0184 a0002c0001t0001g0120 |
5 | HG00280.hp1 HG03516.hp2 HG03540.hp1 others(2): Show |
splice_region_variant&intron_variant | LOW | c.610-7G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 8/53 | chr12 | 47995926 | |||||||
| chr12:47995953 | A | G | 5 | a0001c0002t0001g0020 a0001c0002t0001g0148 a0001c0002t0001g0170 others(2): Show |
7 | HG00597.hp1 HG02132.hp2 HG02523.hp2 others(4): Show |
intron_variant | MODIFIER | c.610-34T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 8/53 | chr12 | 47995953 | |||||||
| chr12:47995976 | G | A | 1 | a0003c0012t0002g0095 | 1 | HG02647.hp1 | intron_variant | MODIFIER | c.610-57C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 8/53 | chr12 | 47995976 | |||||||
| chr12:47996201 | C | T | 1 | a0001c0003t0001g0227 | 1 | HG03516.hp1 | intron_variant | MODIFIER | c.610-282G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 8/53 | chr12 | 47996201 | |||||||
| chr12:47996297 | T | C | 264 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(261): Show |
407 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(404): Show |
intron_variant | MODIFIER | c.609+251A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 8/53 | chr12 | 47996297 | |||||||
| chr12:47996433 | C | T | 2 | a0003c0016t0001g0114 a0003c0016t0001g0115 |
2 | HG02257.hp1 HG02896.hp2 |
intron_variant | MODIFIER | c.609+115G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 8/53 | chr12 | 47996433 | |||||||
| chr12:47996652 | A | T | 3 | a0001c0003t0001g0235 a0001c0003t0001g0236 a0004c0007t0001g0237 |
3 | HG00099.hp2 HG01168.hp2 HG02615.hp2 |
intron_variant | MODIFIER | c.532-27T>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 7/53 | chr12 | 47996652 | |||||||
| chr12:47996802 | T | A | 65 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(62): Show |
105 | HG00140.hp1 HG00323.hp1 HG00408.hp2 others(102): Show |
intron_variant | MODIFIER | c.532-177A>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 7/53 | chr12 | 47996802 | |||||||
| chr12:47996907 | A | T | 1 | a0001c0042t0001g0182 | 1 | HG01884.hp1 | intron_variant | MODIFIER | c.532-282T>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 7/53 | chr12 | 47996907 | |||||||
| chr12:47996939 | A | G | 106 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(103): Show |
156 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(153): Show |
intron_variant | MODIFIER | c.532-314T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 7/53 | chr12 | 47996939 | |||||||
| chr12:47996952 | C | T | 1 | a0001c0008t0001g0197 | 1 | HG03471.hp2 | intron_variant | MODIFIER | c.532-327G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 7/53 | chr12 | 47996952 | |||||||
| chr12:47997054 | G | C | 1 | a0001c0002t0001g0169 | 1 | HG04204.hp2 | intron_variant | MODIFIER | c.532-429C>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 7/53 | chr12 | 47997054 | |||||||
| chr12:47997056 | T | G | 106 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(103): Show |
156 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(153): Show |
intron_variant | MODIFIER | c.532-431A>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 7/53 | chr12 | 47997056 | |||||||
| chr12:47997155 | A | T | 1 | a0001c0038t0001g0196 | 1 | HG02630.hp1 | intron_variant | MODIFIER | c.531+451T>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 7/53 | chr12 | 47997155 | |||||||
| chr12:47997184 | G | T | 1 | a0012c0034t0002g0058 | 1 | NA18522.hp1 | intron_variant | MODIFIER | c.531+422C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 7/53 | chr12 | 47997184 | |||||||
| chr12:47997271 | C | T | 1 | a0001c0002t0001g0147 | 1 | HG01255.hp2 | intron_variant | MODIFIER | c.531+335G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 7/53 | chr12 | 47997271 | |||||||
| chr12:47997272 | G | A | 28 | a0001c0003t0001g0006 a0001c0003t0001g0052 a0001c0003t0001g0129 others(25): Show |
34 | HG00099.hp1 HG00099.hp2 HG00609.hp2 others(31): Show |
intron_variant | MODIFIER | c.531+334C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 7/53 | chr12 | 47997272 | |||||||
| chr12:47997311 | C | T | 66 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(63): Show |
106 | HG00140.hp1 HG00323.hp1 HG00408.hp2 others(103): Show |
intron_variant | MODIFIER | c.531+295G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 7/53 | chr12 | 47997311 | |||||||
| chr12:47997344 | C | T | 65 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(62): Show |
105 | HG00140.hp1 HG00323.hp1 HG00408.hp2 others(102): Show |
intron_variant | MODIFIER | c.531+262G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 7/53 | chr12 | 47997344 | |||||||
| chr12:47997416 | G | A | 1 | a0001c0008t0001g0186 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.531+190C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 7/53 | chr12 | 47997416 | |||||||
| chr12:47997986 | C | T | 2 | a0001c0003t0007g0021 a0001c0027t0001g0184 |
4 | HG03516.hp2 HG03540.hp1 HG03579.hp2 others(1): Show |
intron_variant | MODIFIER | c.375+46G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 5/53 | chr12 | 47997986 | |||||||
| chr12:47998218 | T | C | 1 | a0004c0007t0001g0247 | 1 | HG04115.hp1 | intron_variant | MODIFIER | c.310-17A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 3/53 | chr12 | 47998218 | |||||||
| chr12:47998232 | C | T | 1 | a0001c0042t0001g0182 | 1 | HG01884.hp1 | intron_variant | MODIFIER | c.310-31G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 3/53 | chr12 | 47998232 | |||||||
| chr12:47998360 | G | A | 1 | a0002c0001t0002g0096 | 1 | NA19010.hp2 | intron_variant | MODIFIER | c.309+55C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 3/53 | chr12 | 47998360 | |||||||
| chr12:47998614 | G | A | 20 | a0001c0003t0001g0025 a0001c0003t0001g0252 a0001c0003t0001g0261 others(17): Show |
27 | HG00423.hp2 HG00544.hp1 HG00738.hp2 others(24): Show |
intron_variant | MODIFIER | c.293-183C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47998614 | |||||||
| chr12:47998650 | A | G | 119 | a0001c0002t0001g0249 a0001c0003t0001g0006 a0001c0003t0001g0010 others(116): Show |
171 | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(168): Show |
intron_variant | MODIFIER | c.293-219T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47998650 | |||||||
| chr12:47998695 | G | C | 21 | a0001c0002t0001g0249 a0001c0003t0001g0025 a0001c0003t0001g0252 others(18): Show |
28 | HG00423.hp2 HG00544.hp1 HG00738.hp2 others(25): Show |
intron_variant | MODIFIER | c.293-264C>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47998695 | |||||||
| chr12:47998696 | G | A | 1 | a0001c0003t0001g0248 | 1 | HG03239.hp1 | intron_variant | MODIFIER | c.293-265C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47998696 | |||||||
| chr12:47998925 | G | A | 1 | a0010c0044t0001g0267 | 1 | HG02895.hp2 | intron_variant | MODIFIER | c.293-494C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47998925 | |||||||
| chr12:47998931 | T | A | 1 | a0001c0004t0001g0222 | 1 | HG03710.hp2 | intron_variant | MODIFIER | c.293-500A>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47998931 | |||||||
| chr12:47998966 | C | T | 4 | a0001c0003t0003g0193 a0001c0003t0003g0194 a0001c0003t0003g0195 others(1): Show |
4 | HG02922.hp1 HG02970.hp1 HG03209.hp1 others(1): Show |
intron_variant | MODIFIER | c.293-535G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47998966 | |||||||
| chr12:47998978 | A | G | 1 | a0004c0017t0001g0146 | 1 | HG02015.hp1 | intron_variant | MODIFIER | c.293-547T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47998978 | |||||||
| chr12:47999041 | C | G | 33 | a0001c0003t0001g0006 a0001c0003t0001g0052 a0001c0003t0001g0129 others(30): Show |
42 | HG00099.hp1 HG00099.hp2 HG00609.hp2 others(39): Show |
intron_variant | MODIFIER | c.293-610G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999041 | |||||||
| chr12:47999080 | A | C | 1 | a0003c0005t0002g0098 | 1 | HG01099.hp1 | intron_variant | MODIFIER | c.293-649T>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999080 | |||||||
| chr12:47999131 | C | G | 187 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(184): Show |
279 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(276): Show |
intron_variant | MODIFIER | c.293-700G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999131 | |||||||
| chr12:47999167 | G | A | 6 | a0001c0003t0001g0227 a0001c0004t0001g0050 a0001c0004t0001g0225 others(3): Show |
7 | HG02559.hp1 HG02647.hp2 HG02723.hp2 others(4): Show |
intron_variant | MODIFIER | c.293-736C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999167 | |||||||
| chr12:47999192 | A | G | 1 | a0003c0030t0002g0066 | 1 | HG02965.hp2 | intron_variant | MODIFIER | c.292+727T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999192 | |||||||
| chr12:47999315 | G | A | 68 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(65): Show |
107 | HG00140.hp1 HG00323.hp1 HG00408.hp2 others(104): Show |
intron_variant | MODIFIER | c.292+604C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999315 | |||||||
| chr12:47999323 | G | T | 186 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(183): Show |
278 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(275): Show |
intron_variant | MODIFIER | c.292+596C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999323 | |||||||
| chr12:47999352 | T | C | 1 | a0001c0003t0001g0133 | 1 | HG01978.hp2 | intron_variant | MODIFIER | c.292+567A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999352 | |||||||
| chr12:47999354 | C | T | 128 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(125): Show |
185 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(182): Show |
intron_variant | MODIFIER | c.292+565G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999354 | |||||||
| chr12:47999537 | G | A | 127 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(124): Show |
184 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(181): Show |
intron_variant | MODIFIER | c.292+382C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999537 | |||||||
| chr12:47999568 | T | C | 2 | a0003c0005t0002g0097 a0003c0005t0002g0111 |
2 | HG03453.hp2 NA18906.hp1 |
intron_variant | MODIFIER | c.292+351A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999568 | |||||||
| chr12:47999634 | A | ATT | 22 | a0001c0002t0001g0054 a0001c0002t0001g0249 a0001c0003t0001g0025 others(19): Show |
35 | HG00423.hp2 HG00544.hp1 HG00673.hp1 others(32): Show |
intron_variant | MODIFIER | c.292+283_292+284dup others(2): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999634 | |||||||
| chr12:47999634 | A | ATTT | 41 | a0001c0003t0001g0134 a0001c0003t0001g0183 a0001c0003t0001g0208 others(38): Show |
64 | HG00140.hp2 HG00280.hp2 HG00621.hp1 others(61): Show |
intron_variant | MODIFIER | c.292+282_292+284dup others(3): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999634 | |||||||
| chr12:47999634 | A | ATTTT | 26 | a0001c0002t0001g0174 a0001c0002t0001g0175 a0001c0003t0001g0010 others(23): Show |
34 | HG01167.hp2 HG01884.hp1 HG02074.hp1 others(31): Show |
intron_variant | MODIFIER | c.292+281_292+284dup others(4): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999634 | |||||||
| chr12:47999634 | A | ATTTTT | 24 | a0001c0002t0001g0020 a0001c0002t0001g0040 a0001c0002t0001g0170 others(21): Show |
31 | HG00323.hp1 HG00408.hp2 HG00597.hp1 others(28): Show |
intron_variant | MODIFIER | c.292+280_292+284dup others(5): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999634 | |||||||
| chr12:47999634 | A | ATTTTTT | 94 | a0001c0002t0001g0002 a0001c0002t0001g0018 a0001c0002t0001g0019 others(91): Show |
159 | HG00280.hp1 HG00323.hp2 HG00408.hp1 others(156): Show |
intron_variant | MODIFIER | c.292+279_292+284dup others(6): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999634 | |||||||
| chr12:47999634 | A | ATTTTTTT | 22 | a0001c0002t0001g0005 a0001c0002t0001g0140 a0001c0002t0001g0145 others(19): Show |
41 | HG00140.hp1 HG00438.hp2 HG00735.hp2 others(38): Show |
intron_variant | MODIFIER | c.292+278_292+284dup others(7): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999634 | |||||||
| chr12:47999634 | A | ATTTTTTT others(1): Show |
7 | a0002c0001t0002g0062 a0003c0005t0002g0026 a0003c0005t0002g0059 others(4): Show |
8 | HG01109.hp1 HG01361.hp2 HG02572.hp1 others(5): Show |
intron_variant | MODIFIER | c.292+277_292+284dup others(8): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999634 | |||||||
| chr12:47999634 | AT | A | 21 | a0001c0003t0001g0006 a0001c0003t0001g0130 a0001c0003t0001g0132 others(18): Show |
26 | HG00099.hp1 HG00099.hp2 HG00609.hp2 others(23): Show |
intron_variant | MODIFIER | c.292+284delA | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999634 | |||||||
| chr12:47999661 | C | T | 125 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(122): Show |
182 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(179): Show |
intron_variant | MODIFIER | c.292+258G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999661 | |||||||
| chr12:47999693 | T | G | 1 | a0004c0007t0001g0139 | 1 | NA19001.hp2 | intron_variant | MODIFIER | c.292+226A>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999693 | |||||||
| chr12:47999694 | G | T | 1 | a0004c0007t0001g0139 | 1 | NA19001.hp2 | intron_variant | MODIFIER | c.292+225C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999694 | |||||||
| chr12:47999743 | G | A | 119 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(116): Show |
175 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(172): Show |
intron_variant | MODIFIER | c.292+176C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999743 | |||||||
| chr12:47999826 | T | A | 1 | a0004c0017t0012g0176 | 1 | HG00621.hp2 | intron_variant | MODIFIER | c.292+93A>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 2/53 | chr12 | 47999826 | |||||||
| chr12:48000183 | C | T | 1 | a0002c0001t0001g0116 | 1 | HG02523.hp1 | intron_variant | MODIFIER | c.86-58G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48000183 | |||||||
| chr12:48000381 | A | G | 5 | a0001c0002t0001g0140 a0001c0002t0001g0141 a0001c0037t0001g0142 others(2): Show |
5 | NA18985.hp2 NA18988.hp1 NA18988.hp2 others(2): Show |
intron_variant | MODIFIER | c.86-256T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48000381 | |||||||
| chr12:48000452 | G | A | 4 | a0002c0001t0002g0015 a0002c0001t0002g0107 a0002c0001t0002g0108 others(1): Show |
7 | HG01069.hp2 HG01071.hp1 HG01975.hp1 others(4): Show |
intron_variant | MODIFIER | c.86-327C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48000452 | |||||||
| chr12:48000521 | A | G | 1 | a0001c0003t0001g0187 | 1 | NA20129.hp1 | intron_variant | MODIFIER | c.86-396T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48000521 | |||||||
| chr12:48000627 | T | C | 2 | a0005c0011t0001g0177 a0005c0011t0001g0178 |
2 | HG01081.hp1 HG01891.hp2 |
intron_variant | MODIFIER | c.86-502A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48000627 | |||||||
| chr12:48001040 | G | T | 73 | a0001c0002t0001g0224 a0001c0003t0001g0010 a0001c0003t0001g0041 others(70): Show |
111 | HG00140.hp2 HG00280.hp2 HG00621.hp1 others(108): Show |
intron_variant | MODIFIER | c.86-915C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48001040 | |||||||
| chr12:48001260 | C | CG | 186 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(183): Show |
277 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(274): Show |
intron_variant | MODIFIER | c.86-1136dupC | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48001260 | |||||||
| chr12:48001319 | T | G | 186 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(183): Show |
277 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(274): Show |
intron_variant | MODIFIER | c.86-1194A>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48001319 | |||||||
| chr12:48001557 | G | C | 1 | a0001c0002t0001g0179 | 1 | HG02523.hp2 | intron_variant | MODIFIER | c.86-1432C>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48001557 | |||||||
| chr12:48001578 | C | T | 1 | a0003c0005t0002g0059 | 1 | HG03654.hp2 | intron_variant | MODIFIER | c.86-1453G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48001578 | |||||||
| chr12:48001590 | C | A | 1 | a0002c0001t0002g0110 | 1 | NA18984.hp2 | intron_variant | MODIFIER | c.86-1465G>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48001590 | |||||||
| chr12:48001656 | T | C | 1 | a0001c0002t0001g0180 | 1 | NA19056.hp2 | intron_variant | MODIFIER | c.86-1531A>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48001656 | |||||||
| chr12:48001705 | C | T | 1 | a0001c0008t0001g0186 | 1 | HG01192.hp1 | intron_variant | MODIFIER | c.86-1580G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48001705 | |||||||
| chr12:48001969 | G | T | 1 | a0001c0002t0001g0249 | 1 | HG02071.hp2 | intron_variant | MODIFIER | c.86-1844C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48001969 | |||||||
| chr12:48002117 | C | T | 179 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(176): Show |
269 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(266): Show |
intron_variant | MODIFIER | c.86-1992G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48002117 | |||||||
| chr12:48002226 | T | G | 22 | a0001c0002t0001g0054 a0001c0002t0001g0249 a0001c0003t0001g0025 others(19): Show |
30 | HG00423.hp2 HG00544.hp1 HG00673.hp1 others(27): Show |
intron_variant | MODIFIER | c.85+2011A>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48002226 | |||||||
| chr12:48002232 | G | C | 1 | a0003c0016t0001g0115 | 1 | HG02257.hp1 | intron_variant | MODIFIER | c.85+2005C>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48002232 | |||||||
| chr12:48002277 | G | A | 1 | a0010c0044t0001g0267 | 1 | HG02895.hp2 | intron_variant | MODIFIER | c.85+1960C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48002277 | |||||||
| chr12:48002427 | C | T | 56 | a0001c0002t0001g0224 a0001c0003t0001g0010 a0001c0003t0001g0041 others(53): Show |
91 | HG00140.hp2 HG00280.hp2 HG00621.hp1 others(88): Show |
intron_variant | MODIFIER | c.85+1810G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48002427 | |||||||
| chr12:48002581 | G | C | 114 | a0001c0002t0001g0054 a0001c0002t0001g0224 a0001c0002t0001g0249 others(111): Show |
165 | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(162): Show |
intron_variant | MODIFIER | c.85+1656C>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48002581 | |||||||
| chr12:48002667 | G | T | 179 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(176): Show |
269 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(266): Show |
intron_variant | MODIFIER | c.85+1570C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48002667 | |||||||
| chr12:48002722 | G | T | 179 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(176): Show |
269 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(266): Show |
intron_variant | MODIFIER | c.85+1515C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48002722 | |||||||
| chr12:48002846 | C | T | 3 | a0003c0016t0001g0114 a0003c0016t0001g0115 a0003c0031t0001g0113 |
3 | HG01884.hp2 HG02257.hp1 HG02896.hp2 |
intron_variant | MODIFIER | c.85+1391G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48002846 | |||||||
| chr12:48002867 | G | A | 1 | a0003c0005t0002g0111 | 1 | HG03453.hp2 | intron_variant | MODIFIER | c.85+1370C>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48002867 | |||||||
| chr12:48002900 | A | G | 1 | a0001c0004t0001g0136 | 1 | NA18987.hp2 | intron_variant | MODIFIER | c.85+1337T>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48002900 | |||||||
| chr12:48002901 | C | A | 1 | a0001c0004t0001g0136 | 1 | NA18987.hp2 | intron_variant | MODIFIER | c.85+1336G>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48002901 | |||||||
| chr12:48002903 | G | C | 1 | a0001c0004t0001g0136 | 1 | NA18987.hp2 | intron_variant | MODIFIER | c.85+1334C>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48002903 | |||||||
| chr12:48003002 | C | T | 179 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(176): Show |
269 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(266): Show |
intron_variant | MODIFIER | c.85+1235G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48003002 | |||||||
| chr12:48003101 | G | GA | 6 | a0001c0003t0001g0266 a0001c0004t0001g0055 a0001c0004t0001g0056 others(3): Show |
8 | HG01168.hp1 HG02723.hp1 NA18955.hp1 others(5): Show |
intron_variant | MODIFIER | c.85+1135dupT | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48003101 | |||||||
| chr12:48003137 | G | T | 56 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(53): Show |
91 | HG00140.hp1 HG00323.hp1 HG00408.hp2 others(88): Show |
intron_variant | MODIFIER | c.85+1100C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48003137 | |||||||
| chr12:48003263 | T | A | 1 | a0012c0034t0002g0058 | 1 | NA18522.hp1 | intron_variant | MODIFIER | c.85+974A>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48003263 | |||||||
| chr12:48003314 | TACACACA others(9): Show |
T | 2 | a0004c0010t0001g0037 a0004c0017t0001g0137 |
3 | HG02080.hp1 NA18966.hp2 NA19007.hp2 |
intron_variant | MODIFIER | c.85+907_85+922delGC others(14): Show |
COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48003314 | |||||||
| chr12:48003456 | G | C | 1 | a0001c0004t0001g0136 | 1 | NA18987.hp2 | intron_variant | MODIFIER | c.85+781C>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48003456 | |||||||
| chr12:48003457 | C | A | 1 | a0001c0004t0001g0136 | 1 | NA18987.hp2 | intron_variant | MODIFIER | c.85+780G>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48003457 | |||||||
| chr12:48003458 | A | T | 1 | a0001c0004t0001g0136 | 1 | NA18987.hp2 | intron_variant | MODIFIER | c.85+779T>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48003458 | |||||||
| chr12:48003820 | C | T | 1 | a0001c0003t0001g0135 | 1 | HG04184.hp2 | intron_variant | MODIFIER | c.85+417G>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48003820 | |||||||
| chr12:48003866 | C | A | 1 | a0010c0044t0001g0267 | 1 | HG02895.hp2 | intron_variant | MODIFIER | c.85+371G>T | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48003866 | |||||||
| chr12:48003883 | G | T | 2 | a0003c0019t0001g0034 a0003c0019t0001g0112 |
3 | HG02809.hp1 HG03486.hp1 NA19240.hp1 |
intron_variant | MODIFIER | c.85+354C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48003883 | |||||||
| chr12:48003974 | C | G | 1 | a0001c0003t0001g0134 | 1 | HG02622.hp1 | intron_variant | MODIFIER | c.85+263G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48003974 | |||||||
| chr12:48003992 | G | T | 1 | a0012c0034t0002g0058 | 1 | NA18522.hp1 | intron_variant | MODIFIER | c.85+245C>A | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48003992 | |||||||
| chr12:48004160 | C | G | 5 | a0001c0003t0001g0129 a0001c0003t0001g0130 a0001c0003t0001g0132 others(2): Show |
5 | HG00642.hp1 HG01109.hp2 HG01261.hp2 others(2): Show |
intron_variant | MODIFIER | c.85+77G>C | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48004160 | |||||||
| chr12:48004219 | G | C | 179 | a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0018 others(176): Show |
269 | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(266): Show |
intron_variant | MODIFIER | c.85+18C>G | COL2A1 | ENSG00000139219.19 | transcript | ENST00000380518.8 | protein_coding | 1/53 | chr12 | 48004219 |