Joint Open Genome and Omics Platform (JoGo)

Search by Genic region

Item	Value
geneid	102723680
ensemblid	ENSG00000270946.6
hgncid	51262
symbol	CT45A9
name	cancer/testis antigen family 45 member A9
refseq_nuc	NM_001291540.2
refseq_prot	NP_001278469.1
ensembl_nuc	ENST00000620704.5
ensembl_prot	ENSP00000483637.1
mane_status	MANE Select
chr	chrX
start	135863418
end	135871812
strand	-
ver	v1.2
region	chrX:135863418-135871812
region5000	chrX:135858418-135876812
regionname0	CT45A9_chrX_135863418_135871812
regionname5000	CT45A9_chrX_135858418_135876812

ahapid	grch38/ chm13v2	alen	total	AFR	AMR	EAS	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	189	7	1	3	2	1	2	CT45A9_chrX_135858418_135876812	CT45A9	MTDKT others(184): Show MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGS AMSKAKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTS SFSGDDLECRETASSPKSQQEINADIKRKLVKELRCVGQKYEKIFEMLEG VQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI	chrX	135858418	135876812
a0002	0/0	189	3	1	1	1	0	0	CT45A9_chrX_135858418_135876812	CT45A9	MTDKT others(184): Show MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGS AMSKEKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTS SFSGDDLECRETASSPKSQREINADIKRKLVKELRCVGQKYEKIFEMLEG VQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI	chrX	135858418	135876812
a0003	0/0	189	2	2	0	0	0	0	CT45A9_chrX_135858418_135876812	CT45A9	MTDKT others(184): Show MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGS AMSKEKKLMTGHAIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGGNVTS SFSGDDLECRETAFSPKSQQEINADIKRQLVKELRCVGQKYEKIFEMLEG VQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI	chrX	135858418	135876812
a0004	0/0	193	1	1	0	0	0	0	CT45A9_chrX_135858418_135876812	CT45A9	MTDKT others(188): Show MTDKTEKVAVDPETVFKRPRECDSPSYQKRQRMALLARKQGAGDSLIAGS AMSKEKKLMTGHAIPPSIPPSQLDSQIDDFTGFSKDRMMQKPGSNAPVGG NVTSSFSGDDLECRETASSPKSQREINADIKRKLVKELRCVGQKYEKIFE MLEGVQGPTAVRKRFFESIIKEAARCMRRDFVKHLKKKLKRMI	chrX	135858418	135876812

achapid	grch38/ chm13v2	clen	total	AFR	AMR	EAS	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/0	567	7	1	3	2	1	CT45A9_chrX_135858418_135876812	CT45A9	ATGAC others(562): Show ATGACCGATAAAACAGAGAAGGTGGCTGTAGATCCTGAAACTGTGTTTAA ACGTCCCAGGGAATGTGACAGTCCTTCGTATCAGAAAAGGCAGAGGATGG CCCTGTTGGCAAGGAAACAAGGAGCAGGAGACAGCCTTATTGCAGGCTCT GCCATGTCCAAAGCAAAGAAGCTTATGACAGGACATGCTATTCCACCCAG CCAATTGGATTCTCAGATTGATGACTTCACTGGTTTCAGCAAAGATAGGA TGATGCAGAAACCTGGTAGCAATGCACCTGTGGGAGGAAACGTTACCAGC AGTTTCTCTGGAGATGACCTAGAATGCAGAGAAACAGCCTCCTCTCCCAA AAGCCAACAAGAAATTAATGCTGATATAAAACGTAAATTAGTGAAGGAAC TCCGATGCGTTGGACAAAAATATGAAAAAATCTTCGAAATGCTTGAAGGA GTGCAAGGACCTACTGCAGTCAGGAAACGATTTTTTGAATCCATCATCAA GGAAGCAGCAAGATGTATGAGACGAGACTTTGTTAAGCACCTTAAGAAGA AACTGAAACGTATGATT	chrX	135858418	135876812
a0002c0002	0/0	567	3	1	1	1	0	CT45A9_chrX_135858418_135876812	CT45A9	ATGAC others(562): Show ATGACCGATAAAACAGAGAAGGTGGCTGTAGATCCTGAAACTGTGTTTAA ACGTCCCAGGGAATGTGACAGTCCTTCGTATCAGAAAAGGCAGAGGATGG CCCTGTTGGCAAGGAAACAAGGAGCAGGAGACAGCCTTATTGCAGGCTCT GCCATGTCCAAAGAAAAGAAGCTTATGACAGGACATGCTATTCCACCCAG CCAATTGGATTCTCAGATTGATGACTTCACTGGTTTCAGCAAAGATAGGA TGATGCAGAAACCTGGTAGCAATGCACCTGTGGGAGGAAACGTTACCAGC AGTTTCTCTGGAGATGACCTAGAATGCAGAGAAACAGCCTCCTCTCCCAA AAGCCAACGAGAAATTAATGCTGATATAAAACGTAAATTAGTGAAGGAAC TCCGATGCGTTGGACAAAAATATGAAAAAATCTTCGAAATGCTTGAAGGA GTGCAAGGACCTACTGCAGTCAGGAAGCGATTTTTTGAATCCATCATCAA GGAAGCAGCAAGATGTATGAGACGAGACTTTGTTAAGCACCTTAAGAAGA AACTGAAACGTATGATT	chrX	135858418	135876812
a0003c0003	0/0	567	2	2	0	0	0	CT45A9_chrX_135858418_135876812	CT45A9	ATGAC others(562): Show ATGACCGATAAAACAGAGAAGGTGGCTGTAGATCCTGAAACTGTGTTTAA ACGTCCCAGGGAATGTGACAGTCCTTCGTATCAGAAAAGGCAGAGGATGG CCCTGTTGGCAAGGAAACAAGGAGCAGGAGACAGCCTTATTGCAGGCTCT GCCATGTCCAAAGAAAAGAAGCTTATGACAGGACATGCTATTCCACCCAG CCAATTGGATTCTCAGATTGATGACTTCACTGGTTTCAGCAAAGATAGGA TGATGCAGAAACCTGGTAGCAATGCACCTGTGGGAGGAAACGTTACCAGC AGTTTCTCTGGAGATGACCTAGAATGCAGAGAAACAGCCTTCTCTCCCAA AAGCCAACAAGAAATTAATGCTGATATAAAACGTCAATTAGTGAAGGAAC TCCGATGCGTTGGACAAAAATATGAAAAAATCTTCGAAATGCTTGAAGGA GTGCAAGGACCTACTGCAGTCAGGAAACGATTTTTTGAATCCATCATCAA GGAAGCAGCAAGATGTATGAGACGAGACTTTGTTAAGCACCTTAAGAAGA AACTGAAACGTATGATT	chrX	135858418	135876812
a0004c0004	0/0	579	1	1	0	0	0	CT45A9_chrX_135858418_135876812	CT45A9	ATGAC others(574): Show ATGACCGATAAAACAGAGAAGGTGGCTGTAGATCCTGAAACTGTGTTTAA ACGTCCCAGGGAATGTGACAGTCCTTCGTATCAGAAAAGGCAGAGGATGG CCCTGTTGGCAAGGAAACAAGGAGCAGGAGACAGCCTTATTGCAGGCTCT GCCATGTCCAAAGAAAAGAAGCTTATGACAGGACATGCTATTCCACCCAG TATTCCACCCAGCCAATTGGATTCTCAGATTGATGACTTCACTGGTTTCA GCAAAGATAGGATGATGCAGAAACCTGGTAGCAATGCACCTGTGGGAGGA AACGTTACCAGCAGTTTCTCTGGAGATGACCTAGAATGCAGAGAAACAGC CTCCTCTCCCAAAAGCCAACGAGAAATTAATGCTGATATAAAACGTAAAT TAGTGAAGGAACTCCGATGCGTTGGACAAAAATATGAAAAAATCTTCGAA ATGCTTGAAGGAGTGCAAGGACCTACTGCAGTCAGGAAGCGATTTTTTGA ATCCATCATCAAGGAAGCAGCAAGATGTATGAGACGAGACTTTGTTAAGC ACCTTAAGAAGAAACTGAAACGTATGATT	chrX	135858418	135876812

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	1368	3	0	3	0	0	CT45A9_chrX_135858418_135876812	CT45A9	AGTGT others(1363): Show AGTGTTCGGCTGGGGCAGGCACGCTGTGGCTGGCTACTTCCCTTCCTCCC ATCCCCCTTGGGCCAAACGGGATCGGTGCTTCTGGTGAGACGCCTCCCCA TGCACATCACTCCCAGGTGCCCTAGGGGGCACATTTCCCACAACTCCCAG AGGGCAGGTTTCTAGAAAGTGCCACCAGTGGGGAGGCGCCACAACTTCAC TGCCATTTTGTGAGGTGCCGCCGTCTCTCCTCCAGCAAGGAAACAATGAC CGATAAAACAGAGAAGGTGGCTGTAGATCCTGAAACTGTGTTTAAACGTC CCAGGGAATGTGACAGTCCTTCGTATCAGAAAAGGCAGAGGATGGCCCTG TTGGCAAGGAAACAAGGAGCAGGAGACAGCCTTATTGCAGGCTCTGCCAT GTCCAAAGCAAAGAAGCTTATGACAGGACATGCTATTCCACCCAGCCAAT TGGATTCTCAGATTGATGACTTCACTGGTTTCAGCAAAGATAGGATGATG CAGAAACCTGGTAGCAATGCACCTGTGGGAGGAAACGTTACCAGCAGTTT CTCTGGAGATGACCTAGAATGCAGAGAAACAGCCTCCTCTCCCAAAAGCC AACAAGAAATTAATGCTGATATAAAACGTAAATTAGTGAAGGAACTCCGA TGCGTTGGACAAAAATATGAAAAAATCTTCGAAATGCTTGAAGGAGTGCA AGGACCTACTGCAGTCAGGAAACGATTTTTTGAATCCATCATCAAGGAAG CAGCAAGATGTATGAGACGAGACTTTGTTAAGCACCTTAAGAAGAAACTG AAACGTATGATTTGAGAATACTTGTCCCTGGAGGATTATCACACCCCAAA TGCATAATCTCATTAATGATTGAGGAGAGAAAAGGATCAGATTGCTGTTT TCTACAATGGAGCAGGATATTGCTGAAGTCTCCTGGCATATGTTACCGAA TCAACTGGCCTTCCAGAGGCTAAGAAATTTCTGTTAGTAAAAGATGTTCT TTTTCCCAAAGCGTTTTATTTGAAAGGATAACTTGTGTTTTGGTTATTTT GTATTCCCACCTGTGCTGGTAGATATTATTAACCCATTAGGTAAATACTA TTACAGTCGTGGTTTCTGCAGCAGCTCACACTGATGTAGCTGGCGTTTAT AACTACCTTCTTTCGCTACCCGTTTCGCATTCCCTTTGCCCTGAGATAGC ATGTCAGTTGGTCATGATGCTTGGCCTGGCAGGATGACTCAAACCTTCAT TACGGAAGAGTCTGAACCATTAGATATCCTGCCTGGATGGGGTTGCTGTG ATTTTCCATTAACTCTAATCGAAAAACACGGGAGGACTAAGAAGCTCTCT AGACATATCACACATACT	chrX	135858418	135876812
a0001c0001t0003	0/0	1368	3	1	0	2	0	CT45A9_chrX_135858418_135876812	CT45A9	AGTGT others(1363): Show AGTGTTCGGCTGGGGCAGGCACGCTGTGGCTGGCTACTTCCCTTCCTCCC ATCCCCCTTGGGCCAAACGGGATCGGTGCTTCTGGTGAGACGCCTCCCCA TGCACATCACTCCCAGGTGCCCTAGGGGGCACATTTCCCACAACTCCCAG AGGGCAGGTTTCTAGAAAGTGCCACCAGTGGGGAGGCGCCACAACTTCAC TGCCATTTTGTGAGGTGCCGCCGTCTCTCCTCCAGCAAGGAAACAATGAC CGATAAAACAGAGAAGGTGGCTGTAGATCCTGAAACTGTGTTTAAACGTC CCAGGGAATGTGACAGTCCTTCGTATCAGAAAAGGCAGAGGATGGCCCTG TTGGCAAGGAAACAAGGAGCAGGAGACAGCCTTATTGCAGGCTCTGCCAT GTCCAAAGCAAAGAAGCTTATGACAGGACATGCTATTCCACCCAGCCAAT TGGATTCTCAGATTGATGACTTCACTGGTTTCAGCAAAGATAGGATGATG CAGAAACCTGGTAGCAATGCACCTGTGGGAGGAAACGTTACCAGCAGTTT CTCTGGAGATGACCTAGAATGCAGAGAAACAGCCTCCTCTCCCAAAAGCC AACAAGAAATTAATGCTGATATAAAACGTAAATTAGTGAAGGAACTCCGA TGCGTTGGACAAAAATATGAAAAAATCTTCGAAATGCTTGAAGGAGTGCA AGGACCTACTGCAGTCAGGAAACGATTTTTTGAATCCATCATCAAGGAAG CAGCAAGATGTATGAGACGAGACTTTGTTAAGCACCTTAAGAAGAAACTG AAACGTATGATTTGAGAATACTTGTCCCTGGAGGATTATCACACCCCAAA TGCATAATCTCATTAATGATTGAGGAGAGAAAAGGATCAGATTGCTGTTT TCTACAATGGAGCAGGATATTGCTGAAGTCTCCTGGCATATGTTACCGAA TCAACTGGCCTTCCAGAGGCTAAGAAATTTCTGTTAGTAAAAGATGTTCT TTTTCCCAAAGCGTTTTATTTGAAAGGATAACTTGTGTTTTGGTTATTTT GTATTCCCACCTGTGCTGGTAGATATTATTAACCCATTAGGTAAATACTA TTACAGTCGTGGTTTCTGCAGCAGCTCACACTGATGTAGCTGGCGTTTAT AACTACCTTCTTTCGCTACCCGTTTCGCATTCCCTTTGCCCTGAGATAGC ATGTCAGTTGGTCATGATGCTTGGCCTGGCAGGATGACTCAAACCTTCAT TACGGAAGAGTCTGAACCATTAGATATCCTGCCTGGATGGGGTTGCTGTG ATTTTCCATTAACTCTAATCGAAAAACACAGGAGGACTAAGAAGCTCTCT AGACATATCACACATACT	chrX	135858418	135876812
a0001c0001t0004	0/0	1368	1	0	0	0	1	CT45A9_chrX_135858418_135876812	CT45A9	AGTGT others(1363): Show AGTGTTCGGCTGGGGCAGGCACGCTGTGGCTGGCTACTTCCCTTCCTCCC ATCCCCCTTGGGCCAAACGGGATCGGTGCTTCTGGTGAGACGCCTCCCCA TGCACATCACTCCCAGGTGCCCTAGGGGGCACATTTCCCACAACTCCCAG AGGGCAGGTTTCTAGAAAGTGCCACCAGTGGGGAGGCGCCACAACTTCAC TGCCATTTTGTGAGGTGCCGCCGTCTCTCCTCCAGCAAGGAAACAATGAC CGATAAAACAGAGAAGGTGGCTGTAGATCCTGAAACTGTGTTTAAACGTC CCAGGGAATGTGACAGTCCTTCGTATCAGAAAAGGCAGAGGATGGCCCTG TTGGCAAGGAAACAAGGAGCAGGAGACAGCCTTATTGCAGGCTCTGCCAT GTCCAAAGCAAAGAAGCTTATGACAGGACATGCTATTCCACCCAGCCAAT TGGATTCTCAGATTGATGACTTCACTGGTTTCAGCAAAGATAGGATGATG CAGAAACCTGGTAGCAATGCACCTGTGGGAGGAAACGTTACCAGCAGTTT CTCTGGAGATGACCTAGAATGCAGAGAAACAGCCTCCTCTCCCAAAAGCC AACAAGAAATTAATGCTGATATAAAACGTAAATTAGTGAAGGAACTCCGA TGCGTTGGACAAAAATATGAAAAAATCTTCGAAATGCTTGAAGGAGTGCA AGGACCTACTGCAGTCAGGAAACGATTTTTTGAATCCATCATCAAGGAAG CAGCAAGATGTATGAGACGAGACTTTGTTAAGCACCTTAAGAAGAAACTG AAACGTATGATTTGAGAATACTTGTCCCTGGAGGATTATCACACCCCAAA TGCATAATCTCGTTAATGATTGAGGAGAGAAAAGGATCAGATTGCTGTTT TCTACAATGGAGCAGGATATTGCTGAAGTCTCCTGGCATATGTTACCGAA TCAACTGGCCTTCCAGAGGCTAAGAAATTTCTGTTAGTAAAAGATGTTCT TTTTCCCAAAGCGTTTTATTTGAAAGGATAACTTGTGTTTTGGTTATTTT GTATTCCCACCTGTGCTGGTAGATATTATTAACCCATTAGGTAAATACTA TTACAGTCGTGGTTTCTGCAGCAGCTCACACTGATGTAGCTGGCGTTTAT AACTACCTTCTTTCGCTACCCGTTTCGCATTCCCTTTGCCCTGAGATAGC ATGTCAGTTGGTCATGATGCTTGGCCTGGCAGGATGACTCAAACCTTCAT TACGGAAGAGTCTGAACCATTAGATATCCTGCCTGGATGGGGTTGCTGTG ATTTTCCATTAACTCTAATCGAAAAACACGGGAGGACTAAGAAGCTCTCT AGACATATCACACATACT	chrX	135858418	135876812
a0002c0002t0002	0/0	1368	3	1	1	1	0	CT45A9_chrX_135858418_135876812	CT45A9	AGTGT others(1363): Show AGTGTTCGGCTGGGGCAGGCACGCTGTGGCTGGCTACTTCCCTTCCTCCC ATCCCCCTTGGGCCAAACGGGATCGGTGCTTCTGGTGAGACGCCTCCCCA TGCACATCACTCCCAGGTGCCCTAGGGGGCACATTTCCCACAACTCCCAG AGGGCAGGTTTCTAGAAAGTGCCACCAGTGGGGAGGCGCCACAACTTCAC TGCCATTTTGTGAGGTGCCGCCGTCTCTCCTCCAGCAAGGAAACAATGAC CGATAAAACAGAGAAGGTGGCTGTAGATCCTGAAACTGTGTTTAAACGTC CCAGGGAATGTGACAGTCCTTCGTATCAGAAAAGGCAGAGGATGGCCCTG TTGGCAAGGAAACAAGGAGCAGGAGACAGCCTTATTGCAGGCTCTGCCAT GTCCAAAGAAAAGAAGCTTATGACAGGACATGCTATTCCACCCAGCCAAT TGGATTCTCAGATTGATGACTTCACTGGTTTCAGCAAAGATAGGATGATG CAGAAACCTGGTAGCAATGCACCTGTGGGAGGAAACGTTACCAGCAGTTT CTCTGGAGATGACCTAGAATGCAGAGAAACAGCCTCCTCTCCCAAAAGCC AACGAGAAATTAATGCTGATATAAAACGTAAATTAGTGAAGGAACTCCGA TGCGTTGGACAAAAATATGAAAAAATCTTCGAAATGCTTGAAGGAGTGCA AGGACCTACTGCAGTCAGGAAGCGATTTTTTGAATCCATCATCAAGGAAG CAGCAAGATGTATGAGACGAGACTTTGTTAAGCACCTTAAGAAGAAACTG AAACGTATGATTTGAGAATACTTGTCCCTGGAGGATTATCACACCCCAAA TGCATAATCTCGTTAATGATTGAGGAGAGAAAAGGATCAGATTGCTGTTT TCTACAATGGAGCAGGATATTGCTGAAGTCTCCTGGCATATGTTACCGAA TCAACTGGCCTTCCAGAGGCTAAGAAATTTCTGTTAGTAAAAGATGTTCT TTTTCCCAAAGCGTTTTATTTGAAAGGATAACTTGTGTTTTGGTTATTTT GTATTCCCACCTGTGCTGGTAGATATTATTAACCCATTAGGTAAATACTA TTACAGTCGTGGTTTCTGCAGCAGCTCACACTGATGTAGCTGGCGTTTAT AACTACCTTCTTTCGCTACCCGTTTCGCATTCCCTTTGCCCTGAGATAGC ATGTCAGTTGGTCATGATGCTTGGCCTGGCAGGATGACTCAAACCTTCAT TACGGAAGAGTCTGAACCATTAGATATCCTGCCTGGATGGGGTTGCTGTG ATTTTCCATTAACTCTAATCGAAAAACACAGGAGGACTAAGAAGCTCTCT AGACATATCACACATACT	chrX	135858418	135876812
a0003c0003t0001	0/0	1368	2	2	0	0	0	CT45A9_chrX_135858418_135876812	CT45A9	AGTGT others(1363): Show AGTGTTCGGCTGGGGCAGGCACGCTGTGGCTGGCTACTTCCCTTCCTCCC ATCCCCCTTGGGCCAAACGGGATCGGTGCTTCTGGTGAGACGCCTCCCCA TGCACATCACTCCCAGGTGCCCTAGGGGGCACATTTCCCACAACTCCCAG AGGGCAGGTTTCTAGAAAGTGCCACCAGTGGGGAGGCGCCACAACTTCAC TGCCATTTTGTGAGGTGCCGCCGTCTCTCCTCCAGCAAGGAAACAATGAC CGATAAAACAGAGAAGGTGGCTGTAGATCCTGAAACTGTGTTTAAACGTC CCAGGGAATGTGACAGTCCTTCGTATCAGAAAAGGCAGAGGATGGCCCTG TTGGCAAGGAAACAAGGAGCAGGAGACAGCCTTATTGCAGGCTCTGCCAT GTCCAAAGAAAAGAAGCTTATGACAGGACATGCTATTCCACCCAGCCAAT TGGATTCTCAGATTGATGACTTCACTGGTTTCAGCAAAGATAGGATGATG CAGAAACCTGGTAGCAATGCACCTGTGGGAGGAAACGTTACCAGCAGTTT CTCTGGAGATGACCTAGAATGCAGAGAAACAGCCTTCTCTCCCAAAAGCC AACAAGAAATTAATGCTGATATAAAACGTCAATTAGTGAAGGAACTCCGA TGCGTTGGACAAAAATATGAAAAAATCTTCGAAATGCTTGAAGGAGTGCA AGGACCTACTGCAGTCAGGAAACGATTTTTTGAATCCATCATCAAGGAAG CAGCAAGATGTATGAGACGAGACTTTGTTAAGCACCTTAAGAAGAAACTG AAACGTATGATTTGAGAATACTTGTCCCTGGAGGATTATCACACCCCAAA TGCATAATCTCATTAATGATTGAGGAGAGAAAAGGATCAGATTGCTGTTT TCTACAATGGAGCAGGATATTGCTGAAGTCTCCTGGCATATGTTACCGAA TCAACTGGCCTTCCAGAGGCTAAGAAATTTCTGTTAGTAAAAGATGTTCT TTTTCCCAAAGCGTTTTATTTGAAAGGATAACTTGTGTTTTGGTTATTTT GTATTCCCACCTGTGCTGGTAGATATTATTAACCCATTAGGTAAATACTA TTACAGTCGTGGTTTCTGCAGCAGCTCACACTGATGTAGCTGGCGTTTAT AACTACCTTCTTTCGCTACCCGTTTCGCATTCCCTTTGCCCTGAGATAGC ATGTCAGTTGGTCATGATGCTTGGCCTGGCAGGATGACTCAAACCTTCAT TACGGAAGAGTCTGAACCATTAGATATCCTGCCTGGATGGGGTTGCTGTG ATTTTCCATTAACTCTAATCGAAAAACACGGGAGGACTAAGAAGCTCTCT AGACATATCACACATACT	chrX	135858418	135876812
a0004c0004t0002	0/0	1380	1	1	0	0	0	CT45A9_chrX_135858418_135876812	CT45A9	AGTGT others(1375): Show AGTGTTCGGCTGGGGCAGGCACGCTGTGGCTGGCTACTTCCCTTCCTCCC ATCCCCCTTGGGCCAAACGGGATCGGTGCTTCTGGTGAGACGCCTCCCCA TGCACATCACTCCCAGGTGCCCTAGGGGGCACATTTCCCACAACTCCCAG AGGGCAGGTTTCTAGAAAGTGCCACCAGTGGGGAGGCGCCACAACTTCAC TGCCATTTTGTGAGGTGCCGCCGTCTCTCCTCCAGCAAGGAAACAATGAC CGATAAAACAGAGAAGGTGGCTGTAGATCCTGAAACTGTGTTTAAACGTC CCAGGGAATGTGACAGTCCTTCGTATCAGAAAAGGCAGAGGATGGCCCTG TTGGCAAGGAAACAAGGAGCAGGAGACAGCCTTATTGCAGGCTCTGCCAT GTCCAAAGAAAAGAAGCTTATGACAGGACATGCTATTCCACCCAGTATTC CACCCAGCCAATTGGATTCTCAGATTGATGACTTCACTGGTTTCAGCAAA GATAGGATGATGCAGAAACCTGGTAGCAATGCACCTGTGGGAGGAAACGT TACCAGCAGTTTCTCTGGAGATGACCTAGAATGCAGAGAAACAGCCTCCT CTCCCAAAAGCCAACGAGAAATTAATGCTGATATAAAACGTAAATTAGTG AAGGAACTCCGATGCGTTGGACAAAAATATGAAAAAATCTTCGAAATGCT TGAAGGAGTGCAAGGACCTACTGCAGTCAGGAAGCGATTTTTTGAATCCA TCATCAAGGAAGCAGCAAGATGTATGAGACGAGACTTTGTTAAGCACCTT AAGAAGAAACTGAAACGTATGATTTGAGAATACTTGTCCCTGGAGGATTA TCACACCCCAAATGCATAATCTCGTTAATGATTGAGGAGAGAAAAGGATC AGATTGCTGTTTTCTACAATGGAGCAGGATATTGCTGAAGTCTCCTGGCA TATGTTACCGAATCAACTGGCCTTCCAGAGGCTAAGAAATTTCTGTTAGT AAAAGATGTTCTTTTTCCCAAAGCGTTTTATTTGAAAGGATAACTTGTGT TTTGGTTATTTTGTATTCCCACCTGTGCTGGTAGATATTATTAACCCATT AGGTAAATACTATTACAGTCGTGGTTTCTGCAGCAGCTCACACTGATGTA GCTGGCGTTTATAACTACCTTCTTTCGCTACCCGTTTCGCATTCCCTTTG CCCTGAGATAGCATGTCAGTTGGTCATGATGCTTGGCCTGGCAGGATGAC TCAAACCTTCATTACGGAAGAGTCTGAACCATTAGATATCCTGCCTGGAT GGGGTTGCTGTGATTTTCCATTAACTCTAATCGAAAAACACAGGAGGACT AAGAAGCTCTCTAGACATATCACACATACT	chrX	135858418	135876812

actghapid	grch38/ chm13v2	total	AFR	AMR	EAS	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	2	0	2	0	0	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
a0001c0001t0001g0003	0/0	1	0	1	0	0	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
a0001c0001t0003g0005	0/0	1	0	0	1	0	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
a0001c0001t0003g0006	0/0	1	0	0	1	0	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
a0001c0001t0003g0007	0/0	1	1	0	0	0	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
a0001c0001t0004g0004	0/0	1	0	0	0	1	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
a0002c0002t0002g0002	0/0	1	1	0	0	0	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
a0002c0002t0002g0009	0/0	1	0	1	0	0	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
a0002c0002t0002g0010	0/0	1	0	0	1	0	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
a0003c0003t0001g0011	0/0	1	1	0	0	0	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
a0003c0003t0001g0012	0/0	1	1	0	0	0	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
a0004c0004t0002g0008	0/0	1	1	0	0	0	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00642	hp1	a0002	c0002	t0002	g0009	AMR	PUR	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
HG00741	hp1	a0001	c0001	t0001	g0003	AMR	PUR	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
HG02040	hp1	a0002	c0002	t0002	g0010	EAS	KHV	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
HG02735	hp1	a0001	c0001	t0004	g0004	SAS	PJL	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
HG02965	hp1	a0002	c0002	t0002	g0002	AFR	ESN	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
HG03139	hp1	a0001	c0001	t0003	g0007	AFR	ESN	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
NA18945	hp1	a0001	c0001	t0003	g0005	EAS	JPT	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
NA19000	hp1	a0001	c0001	t0003	g0006	EAS	JPT	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
HG02486	hp1	a0003	c0003	t0001	g0011	AFR	ACB	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
HG06807	hp1	a0003	c0003	t0001	g0012	AFR	USA	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812
HG06807	hp2	a0004	c0004	t0002	g0008	AFR	USA	CT45A9_chrX_135858418_135876812	CT45A9	chrX	135858418	135876812

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chrX:135865758	G G	T T	3	a0001 a0002 a0004 a0001 a0002 a0004	11	HG00642.hp1 HG00738.hp1 HG00741.hp1 others(8): Show HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	missense_variant	MODERATE	c.385C>A c.385C>A	p.Gln129Lys p.Gln129Lys	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	3/5	630/1368	385/570	129/189	chrX	135865758
chrX:135865784	T T	C C	2	a0002 a0004 a0002 a0004	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	missense_variant	MODERATE	c.359A>G c.359A>G	p.Gln120Arg p.Gln120Arg	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	3/5	604/1368	359/570	120/189	chrX	135865784
chrX:135865802	A A	G G	3	a0001 a0002 a0004 a0001 a0002 a0004	11	HG00642.hp1 HG00738.hp1 HG00741.hp1 others(8): Show HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	missense_variant	MODERATE	c.341T>C c.341T>C	p.Phe114Ser p.Phe114Ser	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	3/5	586/1368	341/570	114/189	chrX	135865802
chrX:135865942	G G	GCTGGGTG others(5): Show GCTGGGTGGAATA	1	a0004 a0004	1	HG06807.hp2 HG06807.hp2	disruptive_inframe_insertion	MODERATE	c.189_200dupTATTCCAC others(4): Show c.189_200dupTATTCCACCCAG	p.Ser67_Gln68insIleP others(8): Show p.Ser67_Gln68insIleProProSer	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	3/5	445/1368	200/570	67/189	chrX	135865942
chrX:135867898	T T	G G	1	a0001 a0001	7	HG00738.hp1 HG00741.hp1 HG00741.hp2 others(4): Show HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02735.hp1 HG03139.hp1 NA18945.hp1 NA19000.hp1	missense_variant	MODERATE	c.164A>C c.164A>C	p.Glu55Ala p.Glu55Ala	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/5	409/1368	164/570	55/189	chrX	135867898

view	chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
	chrX:135865286	T T	C C	2	a0002c0002 a0004c0004 a0002c0002 a0004c0004	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	synonymous_variant	LOW	c.477A>G c.477A>G	p.Lys159Lys p.Lys159Lys	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/5	722/1368	477/570	159/189			chrX	135865286

view	chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
	chrX:135863456	C C	T T	3	a0001c0001t0003 a0002c0002t0002 a0004c0004t0002 a0001c0001t0003 a0002c0002t0002 a0004c0004t0002	7	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(4): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	3_prime_UTR_variant	MODIFIER	c.515G>A c.515G>A		CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	5/5				515		chrX	135863456
	chrX:135863924	T T	C C	3	a0001c0001t0004 a0002c0002t0002 a0004c0004t0002 a0001c0001t0004 a0002c0002t0002 a0004c0004t0002	5	HG00642.hp1 HG02040.hp1 HG02735.hp1 others(2): Show HG00642.hp1 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG06807.hp2	3_prime_UTR_variant	MODIFIER	c.47A>G c.47A>G		CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	5/5				47		chrX	135863924

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chrX:135864034	G G	A A	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	splice_region_variant&intron_variant	LOW	c.513-6C>T c.513-6C>T	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864034
chrX:135864091	G G	A A	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.513-63C>T c.513-63C>T	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864091
chrX:135864098	C C	T T	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.513-70G>A c.513-70G>A	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864098
chrX:135864099	A A	G G	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.513-71T>C c.513-71T>C	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864099
chrX:135864175	G G	A A	10	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	11	HG00642.hp1 HG00738.hp1 HG00741.hp1 others(8): Show HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.513-147C>T c.513-147C>T	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864175
chrX:135864210	C C	T T	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.513-182G>A c.513-182G>A	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864210
chrX:135864227	G G	A A	9	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(6): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0004g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	10	HG00642.hp1 HG00738.hp1 HG00741.hp1 others(7): Show HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.513-199C>T c.513-199C>T	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864227
chrX:135864231	C C	T T	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.513-203G>A c.513-203G>A	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864231
chrX:135864246	C C	CAACT CAACT	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.513-222_513-219dup others(4): Show c.513-222_513-219dupAGTT	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864246
chrX:135864261	G G	C C	1	a0004c0004t0002g0008 a0004c0004t0002g0008	1	HG06807.hp2 HG06807.hp2	intron_variant	MODIFIER	c.513-233C>G c.513-233C>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864261
chrX:135864361	G G	C C	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.513-333C>G c.513-333C>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864361
chrX:135864384	C C	G G	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.513-356G>C c.513-356G>C	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864384
chrX:135864385	C C	T T	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.513-357G>A c.513-357G>A	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864385
chrX:135864390	C C	G G	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.513-362G>C c.513-362G>C	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864390
chrX:135864397	T T	C C	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.513-369A>G c.513-369A>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864397
chrX:135864442	G G	A A	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.513-414C>T c.513-414C>T	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864442
chrX:135864478	C C	T T	6	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004	7	HG00738.hp1 HG00741.hp1 HG00741.hp2 others(4): Show HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02735.hp1 HG03139.hp1 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.513-450G>A c.513-450G>A	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864478
chrX:135864787	C C	T T	6	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004	7	HG00738.hp1 HG00741.hp1 HG00741.hp2 others(4): Show HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02735.hp1 HG03139.hp1 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.512+464G>A c.512+464G>A	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864787
chrX:135864839	TCC TCC	T T	10	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	11	HG00642.hp1 HG00738.hp1 HG00741.hp1 others(8): Show HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.512+410_512+411del others(2): Show c.512+410_512+411delGG	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864839
chrX:135864843	C C	T T	10	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	11	HG00642.hp1 HG00738.hp1 HG00741.hp1 others(8): Show HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.512+408G>A c.512+408G>A	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135864843
chrX:135865087	G G	C C	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.512+164C>G c.512+164C>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135865087
chrX:135865127	G G	A A	10	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	11	HG00642.hp1 HG00738.hp1 HG00741.hp1 others(8): Show HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.512+124C>T c.512+124C>T	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	4/4	chrX	135865127
chrX:135865356	G G	GA GA	3	a0002c0002t0002g0002 a0002c0002t0002g0010 a0004c0004t0002g0008 a0002c0002t0002g0002 a0002c0002t0002g0010 a0004c0004t0002g0008	3	HG02040.hp1 HG02965.hp1 HG06807.hp2 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.419-13dupT c.419-13dupT	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	3/4	chrX	135865356
chrX:135865356	GA GA	G G	6	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004	7	HG00738.hp1 HG00741.hp1 HG00741.hp2 others(4): Show HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02735.hp1 HG03139.hp1 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.419-13delT c.419-13delT	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	3/4	chrX	135865356
chrX:135865717	C C	T T	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	splice_region_variant&intron_variant	LOW	c.418+8G>A c.418+8G>A	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	3/4	chrX	135865717
chrX:135866044	CT CT	C C	2	a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0005 a0001c0001t0003g0006	2	NA18945.hp1 NA19000.hp1 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.170-72delA c.170-72delA	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866044
chrX:135866080	T T	C C	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.170-107A>G c.170-107A>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866080
chrX:135866160	A A	C C	10	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	11	HG00642.hp1 HG00738.hp1 HG00741.hp1 others(8): Show HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.170-187T>G c.170-187T>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866160
chrX:135866325	TG TG	T T	2	a0002c0002t0002g0002 a0004c0004t0002g0008 a0002c0002t0002g0002 a0004c0004t0002g0008	2	HG02965.hp1 HG06807.hp2 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.170-353delC c.170-353delC	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866325
chrX:135866461	A A	G G	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.170-488T>C c.170-488T>C	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866461
chrX:135866463	C C	T T	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.170-490G>A c.170-490G>A	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866463
chrX:135866469	C C	G G	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.170-496G>C c.170-496G>C	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866469
chrX:135866470	TC TC	T T	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.170-498delG c.170-498delG	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866470
chrX:135866474	C C	T T	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.170-501G>A c.170-501G>A	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866474
chrX:135866483	T T	C C	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.170-510A>G c.170-510A>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866483
chrX:135866502	T T	C C	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.170-529A>G c.170-529A>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866502
chrX:135866516	G G	A A	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.170-543C>T c.170-543C>T	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866516
chrX:135866528	T T	C C	10	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	11	HG00642.hp1 HG00738.hp1 HG00741.hp1 others(8): Show HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.170-555A>G c.170-555A>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866528
chrX:135866530	T T	C C	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.170-557A>G c.170-557A>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866530
chrX:135866537	T T	C C	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.170-564A>G c.170-564A>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866537
chrX:135866540	A A	C C	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.170-567T>G c.170-567T>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866540
chrX:135866547	A A	G G	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.170-574T>C c.170-574T>C	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866547
chrX:135866557	G G	C C	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.170-584C>G c.170-584C>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866557
chrX:135866658	T T	C C	10	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	11	HG00642.hp1 HG00738.hp1 HG00741.hp1 others(8): Show HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.170-685A>G c.170-685A>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866658
chrX:135866659	G G	A A	6	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004	7	HG00738.hp1 HG00741.hp1 HG00741.hp2 others(4): Show HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02735.hp1 HG03139.hp1 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.170-686C>T c.170-686C>T	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135866659
chrX:135867024	G G	A A	10	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	11	HG00642.hp1 HG00738.hp1 HG00741.hp1 others(8): Show HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.169+869C>T c.169+869C>T	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135867024
chrX:135867251	A A	T T	4	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	4	HG00642.hp1 HG02040.hp1 HG02965.hp1 others(1): Show HG00642.hp1 HG02040.hp1 HG02965.hp1 HG06807.hp2	intron_variant	MODIFIER	c.169+642T>A c.169+642T>A	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135867251
chrX:135867300	G G	A A	10	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	11	HG00642.hp1 HG00738.hp1 HG00741.hp1 others(8): Show HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.169+593C>T c.169+593C>T	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135867300
chrX:135867536	C C	G G	3	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010	3	HG00642.hp1 HG02040.hp1 HG02965.hp1 HG00642.hp1 HG02040.hp1 HG02965.hp1	intron_variant	MODIFIER	c.169+357G>C c.169+357G>C	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135867536
chrX:135867703	T T	TA TA	4	a0001c0001t0001g0003 a0001c0001t0003g0006 a0001c0001t0003g0007 others(1): Show a0001c0001t0001g0003 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004	4	HG00741.hp1 HG02735.hp1 HG03139.hp1 others(1): Show HG00741.hp1 HG02735.hp1 HG03139.hp1 NA19000.hp1	intron_variant	MODIFIER	c.169+189dupT c.169+189dupT	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	2/4	chrX	135867703
chrX:135868221	C C	G G	1	a0002c0002t0002g0010 a0002c0002t0002g0010	1	HG02040.hp1 HG02040.hp1	intron_variant	MODIFIER	c.-6-154G>C c.-6-154G>C	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135868221
chrX:135868557	A A	G G	1	a0003c0003t0001g0011 a0003c0003t0001g0011	1	HG02486.hp1 HG02486.hp1	intron_variant	MODIFIER	c.-6-490T>C c.-6-490T>C	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135868557
chrX:135868716	A A	G G	1	a0001c0001t0003g0007 a0001c0001t0003g0007	1	HG03139.hp1 HG03139.hp1	intron_variant	MODIFIER	c.-6-649T>C c.-6-649T>C	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135868716
chrX:135869015	A A	C C	10	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	11	HG00642.hp1 HG00738.hp1 HG00741.hp1 others(8): Show HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.-6-948T>G c.-6-948T>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135869015
chrX:135869063	C C	T T	10	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	11	HG00642.hp1 HG00738.hp1 HG00741.hp1 others(8): Show HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.-6-996G>A c.-6-996G>A	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135869063
chrX:135869117	T T	G G	4	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0007 others(1): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0007 a0001c0001t0004g0004	5	HG00738.hp1 HG00741.hp1 HG00741.hp2 others(2): Show HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02735.hp1 HG03139.hp1	intron_variant	MODIFIER	c.-6-1050A>C c.-6-1050A>C	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135869117
chrX:135869335	A A	G G	6	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004	7	HG00738.hp1 HG00741.hp1 HG00741.hp2 others(4): Show HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02735.hp1 HG03139.hp1 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.-6-1268T>C c.-6-1268T>C	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135869335
chrX:135869362	T T	C C	1	a0002c0002t0002g0002 a0002c0002t0002g0002	1	HG02965.hp1 HG02965.hp1	intron_variant	MODIFIER	c.-6-1295A>G c.-6-1295A>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135869362
chrX:135869488	C C	CTT CTT	3	a0001c0001t0001g0001 a0001c0001t0004g0004 a0002c0002t0002g0002 a0001c0001t0001g0001 a0001c0001t0004g0004 a0002c0002t0002g0002	4	HG00738.hp1 HG00741.hp2 HG02735.hp1 others(1): Show HG00738.hp1 HG00741.hp2 HG02735.hp1 HG02965.hp1	intron_variant	MODIFIER	c.-6-1423_-6-1422dup others(2): Show c.-6-1423_-6-1422dupAA	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135869488
chrX:135869488	C C	CTTT CTTT	5	a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 others(2): Show a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0002c0002t0002g0010 a0004c0004t0002g0008	5	HG02040.hp1 HG03139.hp1 HG06807.hp2 others(2): Show HG02040.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.-6-1424_-6-1422dup others(3): Show c.-6-1424_-6-1422dupAAA	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135869488
chrX:135869503	A A	G G	9	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(6): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004 a0002c0002t0002g0002 a0002c0002t0002g0010 a0004c0004t0002g0008	10	HG00738.hp1 HG00741.hp1 HG00741.hp2 others(7): Show HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.-6-1436T>C c.-6-1436T>C	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135869503
chrX:135869637	C C	T T	1	a0004c0004t0002g0008 a0004c0004t0002g0008	1	HG06807.hp2 HG06807.hp2	intron_variant	MODIFIER	c.-6-1570G>A c.-6-1570G>A	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135869637
chrX:135869693	A A	C C	6	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004	7	HG00738.hp1 HG00741.hp1 HG00741.hp2 others(4): Show HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02735.hp1 HG03139.hp1 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.-6-1626T>G c.-6-1626T>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135869693
chrX:135869813	G G	A A	10	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	11	HG00642.hp1 HG00738.hp1 HG00741.hp1 others(8): Show HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.-6-1746C>T c.-6-1746C>T	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135869813
chrX:135869815	G G	T T	2	a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0005 a0001c0001t0003g0006	2	NA18945.hp1 NA19000.hp1 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.-6-1748C>A c.-6-1748C>A	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135869815
chrX:135870020	G G	A A	2	a0002c0002t0002g0010 a0004c0004t0002g0008 a0002c0002t0002g0010 a0004c0004t0002g0008	2	HG02040.hp1 HG06807.hp2 HG02040.hp1 HG06807.hp2	intron_variant	MODIFIER	c.-7+1554C>T c.-7+1554C>T	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135870020
chrX:135870100	T T	G G	3	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0004g0004 a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0004g0004	4	HG00738.hp1 HG00741.hp1 HG00741.hp2 others(1): Show HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02735.hp1	intron_variant	MODIFIER	c.-7+1474A>C c.-7+1474A>C	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135870100
chrX:135870205	T T	C C	2	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0002 a0002c0002t0002g0009	2	HG00642.hp1 HG02965.hp1 HG00642.hp1 HG02965.hp1	intron_variant	MODIFIER	c.-7+1369A>G c.-7+1369A>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135870205
chrX:135870258	A A	C C	5	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0004g0004 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0004g0004 a0002c0002t0002g0010 a0004c0004t0002g0008	6	HG00738.hp1 HG00741.hp1 HG00741.hp2 others(3): Show HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG06807.hp2	intron_variant	MODIFIER	c.-7+1316T>G c.-7+1316T>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135870258
chrX:135870366	TA TA	T T	6	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004	7	HG00738.hp1 HG00741.hp1 HG00741.hp2 others(4): Show HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02735.hp1 HG03139.hp1 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.-7+1207delT c.-7+1207delT	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135870366
chrX:135870367	A A	T T	2	a0002c0002t0002g0010 a0004c0004t0002g0008 a0002c0002t0002g0010 a0004c0004t0002g0008	2	HG02040.hp1 HG06807.hp2 HG02040.hp1 HG06807.hp2	intron_variant	MODIFIER	c.-7+1207T>A c.-7+1207T>A	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135870367
chrX:135870368	A A	T T	6	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004	7	HG00738.hp1 HG00741.hp1 HG00741.hp2 others(4): Show HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02735.hp1 HG03139.hp1 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.-7+1206T>A c.-7+1206T>A	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135870368
chrX:135870539	T T	C C	8	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(5): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004 a0002c0002t0002g0002 a0002c0002t0002g0009	9	HG00642.hp1 HG00738.hp1 HG00741.hp1 others(6): Show HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02735.hp1 HG02965.hp1 HG03139.hp1 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.-7+1035A>G c.-7+1035A>G	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135870539
chrX:135870597	C C	A A	2	a0002c0002t0002g0010 a0004c0004t0002g0008 a0002c0002t0002g0010 a0004c0004t0002g0008	2	HG02040.hp1 HG06807.hp2 HG02040.hp1 HG06807.hp2	intron_variant	MODIFIER	c.-7+977G>T c.-7+977G>T	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135870597
chrX:135870730	A A	T T	2	a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0002 a0002c0002t0002g0009	2	HG00642.hp1 HG02965.hp1 HG00642.hp1 HG02965.hp1	intron_variant	MODIFIER	c.-7+844T>A c.-7+844T>A	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135870730
chrX:135870772	C C	T T	1	a0003c0003t0001g0011 a0003c0003t0001g0011	1	HG02486.hp1 HG02486.hp1	intron_variant	MODIFIER	c.-7+802G>A c.-7+802G>A	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135870772
chrX:135870923	GCATC GCATC	G G	8	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(5): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004 a0002c0002t0002g0002 a0004c0004t0002g0008	9	HG00738.hp1 HG00741.hp1 HG00741.hp2 others(6): Show HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.-7+647_-7+650delGA others(2): Show c.-7+647_-7+650delGATG	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135870923
chrX:135871156	A A	T T	10	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	11	HG00642.hp1 HG00738.hp1 HG00741.hp1 others(8): Show HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.-7+418T>A c.-7+418T>A	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135871156
chrX:135871221	A A	G G	10	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	11	HG00642.hp1 HG00738.hp1 HG00741.hp1 others(8): Show HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.-7+353T>C c.-7+353T>C	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135871221
chrX:135871318	C C	G G	10	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0004g0004 a0002c0002t0002g0002 a0002c0002t0002g0009 a0002c0002t0002g0010 a0004c0004t0002g0008	11	HG00642.hp1 HG00738.hp1 HG00741.hp1 others(8): Show HG00642.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG02040.hp1 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG06807.hp2 NA18945.hp1 NA19000.hp1	intron_variant	MODIFIER	c.-7+256G>C c.-7+256G>C	CT45A9	ENSG00000270946.6	transcript	ENST00000620704.5	protein_coding	1/4	chrX	135871318

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CT45A9_chrX_135858418_135876812 Genic Haplotype Structure on iGV

Translation Multiple Alignment View

Gene Summary (with MANE)

Amino acid(protein) Level Haplotype Info (Total: 4)

Coding Level Haplotype Info (Total: 4)

Transcript Level Haplotype Info (Total: 6)

Genebody Level Haplotype Info (Total: 12)

Haplotype Details by Sample (Haploid Level) (Total: 13)

Amino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 5)

Coding Level Variants (On coding region but no effect to protein coding variants: Synonymous Mutations) (Total: 1)

Transcript Level Haplotype Variants (Exon) (Total: 2)

Genebody Level Haplotype Variants (Intron) (Total: 80)

Annotation (Repeats)

Annotation (SNP Array)