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geneid	728096
ensemblid	ENSG00000236371.6
hgncid	33282
symbol	CT47A1
name	cancer/testis antigen family 47 member A1
refseq_nuc	NM_001080146.3
refseq_prot	NP_001073615.1
ensembl_nuc	ENST00000433030.4
ensembl_prot	ENSP00000393315.1
mane_status	MANE Select
chr	chrX
start	120982476
end	120985760
strand	-
ver	v1.2
region	chrX:120982476-120985760
region5000	chrX:120977476-120990760
regionname0	CT47A1_chrX_120982476_120985760
regionname5000	CT47A1_chrX_120977476_120990760

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	0/0	288	294	68	56	130	11	29	106	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0002	0/0	288	2	0	0	2	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0003	0/0	281	1	0	0	1	0	0	1	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0004	0/0	288	1	0	0	1	0	0	1	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0005	0/0	187	1	0	0	0	0	1	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0006	0/0	202	1	0	0	1	0	0	1	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0007	0/0	288	1	1	0	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0008	0/0	288	1	1	0	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/0	867	234	68	41	96	8	21	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
c0002	0/0	867	34	0	10	15	3	6	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
c0003	0/0	867	20	0	3	15	0	2	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
c0004	0/0	867	4	0	2	2	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
c0005	0/0	866	1	0	0	0	0	1	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
c0006	0/0	867	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
c0007	0/0	867	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
c0008	0/0	868	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
c0009	0/0	867	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
c0010	0/0	866	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
c0011	0/0	867	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
c0012	0/0	867	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
c0013	0/0	867	1	1	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
c0014	0/0	867	1	1	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/0	394	296	67	55	133	11	30	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
t0002	0/0	394	2	2	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
t0003	0/0	394	2	1	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
t0004	0/0	395	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
t0005	0/0	394	1	0	1	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	153	49	28	59	6	11	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0002	0/0	32	0	10	15	3	4	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0003	0/0	19	0	6	11	0	2	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0004	0/0	18	0	3	13	0	2	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0005	0/0	16	1	3	7	1	4	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0006	0/0	9	0	2	4	0	3	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0007	0/0	7	6	1	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0008	0/0	6	3	0	3	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0009	0/0	4	1	0	1	1	1	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0010	0/0	4	0	2	2	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0011	0/0	3	2	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0012	0/0	3	0	0	3	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0013	0/0	2	2	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0014	0/0	2	1	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0015	0/0	2	1	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0016	0/0	1	0	0	0	0	1	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0017	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0018	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0019	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0020	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0021	0/0	1	0	0	0	0	1	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0022	0/0	1	0	0	0	0	1	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0023	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0024	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0025	0/0	1	1	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0026	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0027	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0028	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0029	0/0	1	1	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0030	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0031	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0032	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0033	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0034	0/0	1	1	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0035	0/0	1	1	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0036	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
g0037	0/0	1	0	1	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	0/0	867	234	68	41	96	8	21	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0001c0002	0/0	867	34	0	10	15	3	6	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0001c0003	0/0	867	20	0	3	15	0	2	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0001c0004	0/0	867	4	0	2	2	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0001c0009	0/0	867	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0001c0012	0/0	867	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0002c0006	0/0	867	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0002c0007	0/0	867	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0003c0010	0/0	866	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0004c0011	0/0	867	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0005c0005	0/0	866	1	0	0	0	0	1	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0006c0008	0/0	868	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0007c0013	0/0	867	1	1	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0008c0014	0/0	867	1	1	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	0/0	1260	228	65	40	94	8	21	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0001c0001t0002	0/0	1260	2	2	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0001c0001t0003	0/0	1260	2	1	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0001c0001t0004	0/0	1261	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0001c0001t0005	0/0	1260	1	0	1	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0001c0002t0001	0/0	1260	34	0	10	15	3	6	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0001c0003t0001	0/0	1260	20	0	3	15	0	2	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0001c0004t0001	0/0	1260	4	0	2	2	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0001c0009t0001	0/0	1260	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0001c0012t0001	0/0	1260	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0002c0006t0001	0/0	1260	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0002c0007t0001	0/0	1260	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0003c0010t0001	0/0	1259	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0004c0011t0001	0/0	1260	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0005c0005t0001	0/0	1259	1	0	0	0	0	1	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0006c0008t0001	0/0	1261	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0007c0013t0001	0/0	1260	1	1	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760
a0008c0014t0001	0/0	1260	1	1	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	copy fasta	chrX	120977476	120990760

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	153	49	28	59	6	11	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0001t0001g0003	0/0	19	0	6	11	0	2	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0001t0001g0005	0/0	16	1	3	7	1	4	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0001t0001g0006	0/0	9	0	2	4	0	3	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0001t0001g0007	0/0	7	6	1	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0001t0001g0008	0/0	6	3	0	3	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0001t0001g0009	0/0	4	1	0	1	1	1	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0001t0001g0011	0/0	3	2	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0001t0001g0012	0/0	3	0	0	3	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0001t0001g0015	0/0	2	1	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0001t0001g0023	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0001t0001g0024	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0001t0001g0025	0/0	1	1	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0001t0001g0027	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0001t0001g0028	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0001t0001g0029	0/0	1	1	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0001t0002g0013	0/0	2	2	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0001t0003g0014	0/0	2	1	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0001t0004g0036	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0001t0005g0037	0/0	1	0	1	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0002t0001g0002	0/0	32	0	10	15	3	4	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0002t0001g0021	0/0	1	0	0	0	0	1	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0002t0001g0022	0/0	1	0	0	0	0	1	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0003t0001g0004	0/0	18	0	3	13	0	2	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0003t0001g0031	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0003t0001g0032	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0004t0001g0010	0/0	4	0	2	2	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0009t0001g0020	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0001c0012t0001g0033	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0002c0006t0001g0017	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0002c0007t0001g0018	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0003c0010t0001g0026	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0004c0011t0001g0030	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0005c0005t0001g0016	0/0	1	0	0	0	0	1	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0006c0008t0001g0019	0/0	1	0	0	1	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0007c0013t0001g0034	0/0	1	1	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
a0008c0014t0001g0035	0/0	1	1	0	0	0	0	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00099	hp2	a0001	c0001	t0001	g0001	EUR	GBR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00140	hp1	a0001	c0001	t0001	g0009	EUR	GBR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00280	hp2	a0001	c0001	t0001	g0001	EUR	FIN	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00323	hp1	a0001	c0001	t0001	g0005	EUR	FIN	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00323	hp2	a0001	c0002	t0001	g0002	EUR	FIN	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00544	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00544	hp2	a0001	c0001	t0001	g0012	EAS	CHS	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00558	hp1	a0001	c0001	t0001	g0008	EAS	CHS	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00558	hp2	a0001	c0002	t0001	g0002	EAS	CHS	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00597	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00597	hp2	a0001	c0001	t0001	g0008	EAS	CHS	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00609	hp1	a0001	c0002	t0001	g0002	EAS	CHS	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00639	hp2	a0001	c0002	t0001	g0002	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00642	hp1	a0001	c0002	t0001	g0002	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00673	hp1	a0001	c0003	t0001	g0004	EAS	CHS	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00733	hp1	a0001	c0002	t0001	g0002	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00733	hp2	a0001	c0002	t0001	g0002	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00738	hp1	a0001	c0004	t0001	g0010	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00741	hp1	a0001	c0002	t0001	g0002	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01069	hp1	a0001	c0001	t0001	g0005	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01071	hp2	a0001	c0001	t0001	g0005	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01074	hp1	a0001	c0002	t0001	g0002	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01081	hp1	a0001	c0002	t0001	g0002	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01081	hp2	a0001	c0001	t0001	g0003	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01106	hp1	a0001	c0003	t0001	g0004	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01167	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01168	hp1	a0001	c0003	t0001	g0004	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01169	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01175	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01192	hp1	a0001	c0002	t0001	g0002	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01243	hp1	a0001	c0001	t0005	g0037	AMR	PUR	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01255	hp1	a0001	c0002	t0001	g0002	AMR	CLM	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01256	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01258	hp1	a0001	c0002	t0001	g0002	AMR	CLM	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01261	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01358	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01361	hp1	a0001	c0003	t0001	g0004	AMR	CLM	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01361	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01496	hp1	a0001	c0001	t0001	g0007	AMR	CLM	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01496	hp2	a0001	c0001	t0001	g0003	AMR	CLM	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01517	hp1	a0001	c0002	t0001	g0002	EUR	IBS	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01517	hp2	a0001	c0001	t0001	g0001	EUR	IBS	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01884	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01884	hp2	a0001	c0001	t0001	g0001	AFR	ACB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01891	hp1	a0007	c0013	t0001	g0034	AFR	ACB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01891	hp2	a0001	c0001	t0001	g0015	AFR	ACB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01928	hp1	a0001	c0004	t0001	g0010	AMR	PEL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01934	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01952	hp1	a0001	c0001	t0001	g0003	AMR	PEL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01975	hp1	a0001	c0001	t0001	g0003	AMR	PEL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01975	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01978	hp2	a0001	c0001	t0001	g0006	AMR	PEL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02004	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02004	hp2	a0001	c0001	t0001	g0003	AMR	PEL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02015	hp1	a0001	c0001	t0001	g0005	EAS	KHV	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02055	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02056	hp1	a0001	c0001	t0001	g0006	EAS	KHV	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02074	hp1	a0001	c0001	t0001	g0005	EAS	KHV	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02083	hp1	a0001	c0001	t0001	g0028	EAS	KHV	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02129	hp1	a0001	c0001	t0001	g0003	EAS	KHV	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02132	hp1	a0001	c0003	t0001	g0004	EAS	KHV	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02135	hp1	a0002	c0006	t0001	g0017	EAS	KHV	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02145	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02148	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02148	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02155	hp1	a0001	c0001	t0001	g0003	EAS	CDX	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02155	hp2	a0001	c0003	t0001	g0004	EAS	CDX	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02165	hp1	a0001	c0003	t0001	g0004	EAS	CDX	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02165	hp2	a0001	c0001	t0001	g0003	EAS	CDX	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02257	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02257	hp2	a0001	c0001	t0001	g0011	AFR	ACB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02258	hp1	a0001	c0001	t0001	g0007	AFR	ACB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02273	hp1	a0001	c0001	t0001	g0003	AMR	PEL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02273	hp2	a0001	c0001	t0001	g0005	AMR	PEL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02280	hp1	a0001	c0001	t0001	g0007	AFR	ACB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02280	hp2	a0001	c0001	t0001	g0001	AFR	ACB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02523	hp1	a0002	c0007	t0001	g0018	EAS	KHV	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02523	hp2	a0001	c0002	t0001	g0002	EAS	KHV	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02572	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02602	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02615	hp1	a0001	c0001	t0001	g0007	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02615	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02622	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02622	hp2	a0001	c0001	t0001	g0007	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02630	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02630	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02647	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02698	hp1	a0001	c0001	t0001	g0005	SAS	PJL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02717	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02735	hp1	a0001	c0001	t0001	g0006	SAS	PJL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02738	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02809	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02809	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02818	hp1	a0001	c0001	t0001	g0008	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02818	hp2	a0001	c0001	t0002	g0013	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02886	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02886	hp2	a0001	c0001	t0001	g0005	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02895	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02897	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02897	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02922	hp1	a0001	c0001	t0001	g0001	AFR	ESN	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02922	hp2	a0001	c0001	t0001	g0001	AFR	ESN	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02965	hp1	a0001	c0001	t0001	g0001	AFR	ESN	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02976	hp1	a0001	c0001	t0001	g0001	AFR	ESN	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02976	hp2	a0001	c0001	t0001	g0001	AFR	ESN	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03017	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03041	hp1	a0001	c0001	t0002	g0013	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03041	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03098	hp1	a0001	c0001	t0001	g0001	AFR	MSL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03130	hp1	a0001	c0001	t0001	g0007	AFR	ESN	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03139	hp1	a0001	c0001	t0001	g0001	AFR	ESN	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03195	hp1	a0001	c0001	t0001	g0001	AFR	ESN	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03195	hp2	a0001	c0001	t0001	g0008	AFR	ESN	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03209	hp1	a0001	c0001	t0001	g0001	AFR	MSL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03225	hp1	a0001	c0001	t0001	g0001	AFR	MSL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03239	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03239	hp2	a0001	c0001	t0001	g0005	SAS	PJL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03453	hp1	a0001	c0001	t0001	g0001	AFR	MSL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03453	hp2	a0001	c0001	t0001	g0001	AFR	MSL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03486	hp1	a0001	c0001	t0001	g0001	AFR	MSL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03486	hp2	a0001	c0001	t0001	g0025	AFR	MSL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03491	hp2	a0001	c0001	t0001	g0006	SAS	PJL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03492	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03516	hp1	a0001	c0001	t0001	g0001	AFR	ESN	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03516	hp2	a0001	c0001	t0001	g0001	AFR	ESN	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03540	hp1	a0001	c0001	t0001	g0007	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03540	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03579	hp1	a0001	c0001	t0001	g0001	AFR	MSL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03654	hp1	a0001	c0003	t0001	g0004	SAS	PJL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03688	hp1	a0001	c0001	t0001	g0001	SAS	STU	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03704	hp1	a0005	c0005	t0001	g0016	SAS	PJL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03704	hp2	a0001	c0002	t0001	g0002	SAS	PJL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03710	hp1	a0001	c0002	t0001	g0002	SAS	PJL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03831	hp1	a0001	c0002	t0001	g0002	SAS	BEB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03831	hp2	a0001	c0002	t0001	g0021	SAS	BEB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03834	hp1	a0001	c0001	t0001	g0003	SAS	BEB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03834	hp2	a0001	c0003	t0001	g0004	SAS	BEB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03927	hp1	a0001	c0001	t0001	g0006	SAS	BEB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03927	hp2	a0001	c0001	t0001	g0009	SAS	BEB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03942	hp1	a0001	c0002	t0001	g0002	SAS	BEB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG04115	hp1	a0001	c0001	t0001	g0005	SAS	STU	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG04184	hp1	a0001	c0002	t0001	g0022	SAS	BEB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG04184	hp2	a0001	c0001	t0001	g0001	SAS	BEB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG04204	hp1	a0001	c0001	t0001	g0005	SAS	STU	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG04228	hp1	a0001	c0001	t0001	g0003	SAS	STU	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18522	hp1	a0001	c0001	t0001	g0001	AFR	YRI	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18747	hp1	a0001	c0003	t0001	g0004	EAS	CHB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18939	hp1	a0001	c0001	t0001	g0024	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18939	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18941	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18941	hp2	a0001	c0002	t0001	g0002	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18943	hp1	a0001	c0001	t0001	g0005	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18944	hp1	a0001	c0012	t0001	g0033	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18947	hp2	a0001	c0002	t0001	g0002	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18949	hp1	a0001	c0003	t0001	g0004	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18949	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18950	hp1	a0001	c0001	t0001	g0005	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18950	hp2	a0001	c0001	t0001	g0009	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18951	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18952	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18953	hp1	a0001	c0002	t0001	g0002	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18957	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18959	hp1	a0001	c0001	t0001	g0011	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18960	hp1	a0001	c0009	t0001	g0020	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18961	hp1	a0001	c0002	t0001	g0002	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18964	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18964	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18965	hp1	a0001	c0001	t0001	g0005	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18966	hp1	a0001	c0003	t0001	g0004	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18967	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18968	hp1	a0001	c0002	t0001	g0002	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18968	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18969	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18970	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18973	hp1	a0001	c0003	t0001	g0004	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18977	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18979	hp1	a0001	c0001	t0001	g0012	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18980	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18980	hp2	a0001	c0001	t0001	g0006	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18982	hp1	a0001	c0003	t0001	g0004	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18984	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18985	hp1	a0006	c0008	t0001	g0019	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18988	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18989	hp1	a0001	c0001	t0001	g0023	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18990	hp1	a0001	c0003	t0001	g0004	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18991	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18991	hp2	a0001	c0001	t0001	g0006	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18992	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18992	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18993	hp1	a0001	c0003	t0001	g0004	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18993	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18998	hp1	a0001	c0001	t0001	g0027	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18998	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19002	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19002	hp2	a0001	c0003	t0001	g0031	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19003	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19004	hp2	a0001	c0002	t0001	g0002	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19006	hp1	a0001	c0002	t0001	g0002	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19007	hp1	a0001	c0002	t0001	g0002	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19009	hp1	a0001	c0001	t0001	g0005	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19012	hp1	a0001	c0001	t0001	g0008	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19030	hp1	a0001	c0001	t0001	g0001	AFR	LWK	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19030	hp2	a0001	c0001	t0001	g0001	AFR	LWK	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19043	hp1	a0001	c0001	t0001	g0001	AFR	LWK	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19055	hp1	a0001	c0004	t0001	g0010	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19056	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19057	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19057	hp2	a0003	c0010	t0001	g0026	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19058	hp1	a0001	c0002	t0001	g0002	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19062	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19063	hp1	a0001	c0001	t0001	g0006	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19064	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19064	hp2	a0001	c0001	t0001	g0003	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19065	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19068	hp1	a0001	c0001	t0001	g0012	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19070	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19072	hp1	a0001	c0001	t0001	g0015	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19074	hp1	a0001	c0003	t0001	g0004	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19074	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19075	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19076	hp1	a0001	c0001	t0001	g0003	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19079	hp1	a0001	c0002	t0001	g0002	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19080	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19080	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19081	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19081	hp2	a0001	c0001	t0001	g0005	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19082	hp1	a0001	c0001	t0004	g0036	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19084	hp1	a0001	c0003	t0001	g0032	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19084	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19085	hp1	a0001	c0003	t0001	g0004	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19086	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19087	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19087	hp2	a0004	c0011	t0001	g0030	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19088	hp1	a0001	c0002	t0001	g0002	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19090	hp1	a0001	c0001	t0003	g0014	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19090	hp2	a0001	c0002	t0001	g0002	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19091	hp2	a0001	c0004	t0001	g0010	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19240	hp1	a0001	c0001	t0001	g0008	AFR	YRI	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA19240	hp2	a0001	c0001	t0001	g0001	AFR	YRI	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA20129	hp1	a0001	c0001	t0001	g0001	AFR	ASW	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA20129	hp2	a0001	c0001	t0001	g0001	AFR	ASW	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA20805	hp1	a0001	c0002	t0001	g0002	EUR	TSI	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG01123	hp2	a0001	c0001	t0001	g0006	AMR	CLM	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02109	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02109	hp2	a0001	c0001	t0003	g0014	AFR	ACB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02486	hp1	a0001	c0001	t0001	g0029	AFR	ACB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02559	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG02559	hp2	a0008	c0014	t0001	g0035	AFR	ACB	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG03471	hp1	a0001	c0001	t0001	g0001	AFR	MSL	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG06807	hp1	a0001	c0001	t0001	g0001	AFR	USA	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
HG06807	hp2	a0001	c0001	t0001	g0011	AFR	USA	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA18955	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA20300	hp1	a0001	c0001	t0001	g0009	AFR	USA	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760
NA20300	hp2	a0001	c0001	t0001	g0001	AFR	USA	CT47A1_chrX_120977476_120990760	CT47A1	chrX	120977476	120990760

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chrX:120983820	CT CT	C C	1	a0003 a0003	1	NA19057.hp2 NA19057.hp2	frameshift_variant	HIGH	c.822delA c.822delA	p.Glu275fs p.Glu275fs	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	2/3	1053/1260	822/867	274/288	chrX	120983820
chrX:120984817	G G	C C	1	a0004 a0004	1	NA19087.hp2 NA19087.hp2	missense_variant	MODERATE	c.713C>G c.713C>G	p.Pro238Arg p.Pro238Arg	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/3	944/1260	713/867	238/288	chrX	120984817
chrX:120985029	CG CG	C C	1	a0005 a0005	1	HG03704.hp1 HG03704.hp1	frameshift_variant	HIGH	c.500delC c.500delC	p.Pro167fs p.Pro167fs	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/3	731/1260	500/867	167/288	chrX	120985029
chrX:120985185	C C	CG CG	1	a0006 a0006	1	NA18985.hp1 NA18985.hp1	frameshift_variant	HIGH	c.344dupC c.344dupC	p.Ala116fs p.Ala116fs	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/3	575/1260	344/867	115/288	chrX	120985185
chrX:120985228	T T	C C	1	a0007 a0007	1	HG01891.hp1 HG01891.hp1	missense_variant	MODERATE	c.302A>G c.302A>G	p.Glu101Gly p.Glu101Gly	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/3	533/1260	302/867	101/288	chrX	120985228
chrX:120985237	T T	C C	1	a0008 a0008	1	HG02559.hp2 HG02559.hp2	missense_variant	MODERATE	c.293A>G c.293A>G	p.Glu98Gly p.Glu98Gly	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/3	524/1260	293/867	98/288	chrX	120985237
chrX:120985300	C C	T T	1	a0002 a0002	2	HG02135.hp1 HG02523.hp1 HG02135.hp1 HG02523.hp1	missense_variant	MODERATE	c.230G>A c.230G>A	p.Arg77Gln p.Arg77Gln	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/3	461/1260	230/867	77/288	chrX	120985300

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chrX:120983809	T T	C C	12	a0001c0001 a0001c0003 a0001c0009 others(9): Show a0001c0001 a0001c0003 a0001c0009 a0001c0012 a0002c0006 a0002c0007 a0003c0010 a0004c0011 a0005c0005 a0006c0008 a0007c0013 a0008c0014	264	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(261): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp2 HG00323.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00639.hp1 HG00673.hp1 HG00741.hp2 HG01069.hp1 HG01071.hp1 HG01071.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01256.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02486.hp1 HG02523.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02698.hp1 HG02717.hp1 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03704.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18947.hp1 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18973.hp1 NA18973.hp2 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18990.hp1 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19009.hp1 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19076.hp1 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20905.hp1	synonymous_variant	LOW	c.834A>G c.834A>G	p.Ala278Ala p.Ala278Ala	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	2/3	1065/1260	834/867	278/288	chrX	120983809
chrX:120983842	C C	T T	1	a0001c0009 a0001c0009	1	NA18960.hp1 NA18960.hp1	synonymous_variant	LOW	c.801G>A c.801G>A	p.Glu267Glu p.Glu267Glu	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	2/3	1032/1260	801/867	267/288	chrX	120983842
chrX:120984915	G G	C C	2	a0001c0003 a0002c0007 a0001c0003 a0002c0007	21	HG00673.hp1 HG01106.hp1 HG01168.hp1 others(18): Show HG00673.hp1 HG01106.hp1 HG01168.hp1 HG01361.hp1 HG02132.hp1 HG02155.hp2 HG02165.hp1 HG02523.hp1 HG03654.hp1 HG03834.hp2 NA18747.hp1 NA18949.hp1 NA18966.hp1 NA18973.hp1 NA18982.hp1 NA18990.hp1 NA18993.hp1 NA19002.hp2 NA19074.hp1 NA19084.hp1 NA19085.hp1	synonymous_variant	LOW	c.615C>G c.615C>G	p.Ala205Ala p.Ala205Ala	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/3	846/1260	615/867	205/288	chrX	120984915
chrX:120985068	T T	G G	2	a0001c0004 a0001c0012 a0001c0004 a0001c0012	5	HG00738.hp1 HG01928.hp1 NA18944.hp1 others(2): Show HG00738.hp1 HG01928.hp1 NA18944.hp1 NA19055.hp1 NA19091.hp2	synonymous_variant	LOW	c.462A>C c.462A>C	p.Pro154Pro p.Pro154Pro	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/3	693/1260	462/867	154/288	chrX	120985068
chrX:120985449	C C	T T	1	a0005c0005 a0005c0005	1	HG03704.hp1 HG03704.hp1	synonymous_variant	LOW	c.81G>A c.81G>A	p.Ala27Ala p.Ala27Ala	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/3	312/1260	81/867	27/288	chrX	120985449

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chrX:120985550	T T	TG TG	1	a0001c0001t0004 a0001c0001t0004	1	NA19082.hp1 NA19082.hp1	5_prime_UTR_variant	MODIFIER	c.-22dupC c.-22dupC	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/3	22	chrX	120985550
chrX:120985559	G G	A A	1	a0001c0001t0005 a0001c0001t0005	1	HG01243.hp1 HG01243.hp1	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-30C>T c.-30C>T	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/3		chrX	120985559
chrX:120985644	A A	G G	1	a0001c0001t0003 a0001c0001t0003	2	HG02109.hp2 NA19090.hp1 HG02109.hp2 NA19090.hp1	5_prime_UTR_variant	MODIFIER	c.-115T>C c.-115T>C	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/3	115	chrX	120985644
chrX:120985689	C C	T T	1	a0001c0001t0002 a0001c0001t0002	2	HG02818.hp2 HG03041.hp1 HG02818.hp2 HG03041.hp1	5_prime_UTR_variant	MODIFIER	c.-160G>A c.-160G>A	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/3	160	chrX	120985689

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chrX:120982660	G G	A A	28	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0007 others(25): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0002g0013 a0001c0001t0003g0014 a0001c0001t0004g0036 a0001c0001t0005g0037 a0001c0003t0001g0004 a0001c0003t0001g0031 a0001c0003t0001g0032 a0001c0009t0001g0020 a0002c0006t0001g0017 a0002c0007t0001g0018 a0003c0010t0001g0026 a0004c0011t0001g0030 a0005c0005t0001g0016 a0006c0008t0001g0019 a0007c0013t0001g0034	226	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(223): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00639.hp1 HG00673.hp1 HG00741.hp2 HG01071.hp1 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01256.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02486.hp1 HG02523.hp1 HG02559.hp1 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02717.hp1 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03704.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04184.hp2 HG04199.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18939.hp1 NA18941.hp1 NA18945.hp1 NA18947.hp1 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp2 NA18969.hp1 NA18971.hp1 NA18973.hp1 NA18973.hp2 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18990.hp1 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19082.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.32-54C>T c.32-54C>T	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	2/2	chrX	120982660
chrX:120982718	A A	G G	1	a0001c0001t0001g0029 a0001c0001t0001g0029	1	HG02486.hp1 HG02486.hp1	intron_variant	MODIFIER	c.32-112T>C c.32-112T>C	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	2/2	chrX	120982718
chrX:120982912	CT CT	C C	1	a0003c0010t0001g0026 a0003c0010t0001g0026	1	NA19057.hp2 NA19057.hp2	intron_variant	MODIFIER	c.32-307delA c.32-307delA	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	2/2	chrX	120982912
chrX:120983025	C C	T T	1	a0001c0001t0004g0036 a0001c0001t0004g0036	1	NA19082.hp1 NA19082.hp1	intron_variant	MODIFIER	c.32-419G>A c.32-419G>A	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	2/2	chrX	120983025
chrX:120983106	GA GA	G G	1	a0001c0003t0001g0031 a0001c0003t0001g0031	1	NA19002.hp2 NA19002.hp2	intron_variant	MODIFIER	c.32-501delT c.32-501delT	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	2/2	chrX	120983106
chrX:120983250	T T	C C	5	a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0011 others(2): Show a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0015 a0001c0002t0001g0021	19	HG00140.hp1 HG01123.hp2 HG01891.hp2 others(16): Show HG00140.hp1 HG01123.hp2 HG01891.hp2 HG01978.hp2 HG02056.hp1 HG02257.hp2 HG02735.hp1 HG03491.hp2 HG03831.hp2 HG03927.hp1 HG03927.hp2 HG06807.hp2 NA18950.hp2 NA18959.hp1 NA18980.hp2 NA18991.hp2 NA19063.hp1 NA19072.hp1 NA20300.hp1	intron_variant	MODIFIER	c.31+495A>G c.31+495A>G	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	2/2	chrX	120983250
chrX:120983372	G G	C C	1	a0001c0001t0001g0025 a0001c0001t0001g0025	1	HG03486.hp2 HG03486.hp2	intron_variant	MODIFIER	c.31+373C>G c.31+373C>G	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	2/2	chrX	120983372
chrX:120983425	G G	GT GT	1	a0001c0001t0001g0024 a0001c0001t0001g0024	1	NA18939.hp1 NA18939.hp1	intron_variant	MODIFIER	c.31+319dupA c.31+319dupA	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	2/2	chrX	120983425
chrX:120983533	A A	G G	4	a0001c0001t0001g0006 a0001c0001t0001g0012 a0001c0001t0001g0015 others(1): Show a0001c0001t0001g0006 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0023	15	HG00544.hp2 HG01123.hp2 HG01891.hp2 others(12): Show HG00544.hp2 HG01123.hp2 HG01891.hp2 HG01978.hp2 HG02056.hp1 HG02735.hp1 HG03491.hp2 HG03927.hp1 NA18979.hp1 NA18980.hp2 NA18989.hp1 NA18991.hp2 NA19063.hp1 NA19068.hp1 NA19072.hp1	intron_variant	MODIFIER	c.31+212T>C c.31+212T>C	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	2/2	chrX	120983533
chrX:120983610	T T	A A	31	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 others(28): Show a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0027 a0001c0001t0001g0029 a0001c0001t0002g0013 a0001c0001t0003g0014 a0001c0001t0004g0036 a0001c0001t0005g0037 a0001c0002t0001g0022 a0001c0003t0001g0004 a0001c0003t0001g0031 a0001c0003t0001g0032 a0001c0009t0001g0020 a0002c0006t0001g0017 a0002c0007t0001g0018 a0003c0010t0001g0026 a0004c0011t0001g0030 a0005c0005t0001g0016 a0006c0008t0001g0019 a0007c0013t0001g0034 a0008c0014t0001g0035	244	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(241): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp2 HG00323.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00639.hp1 HG00673.hp1 HG00741.hp2 HG01069.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01256.hp1 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02015.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02486.hp1 HG02523.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02698.hp1 HG02717.hp1 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp1 HG03688.hp1 HG03704.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18939.hp1 NA18941.hp1 NA18943.hp1 NA18945.hp1 NA18947.hp1 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp2 NA18969.hp1 NA18971.hp1 NA18973.hp1 NA18973.hp2 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18990.hp1 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19009.hp1 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20905.hp1	intron_variant	MODIFIER	c.31+135A>T c.31+135A>T	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	2/2	chrX	120983610
chrX:120983616	AT AT	A A	1	a0001c0003t0001g0031 a0001c0003t0001g0031	1	NA19002.hp2 NA19002.hp2	intron_variant	MODIFIER	c.31+128delA c.31+128delA	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	2/2	chrX	120983616
chrX:120984121	CT CT	C C	1	a0001c0003t0001g0032 a0001c0003t0001g0032	1	NA19084.hp1 NA19084.hp1	intron_variant	MODIFIER	c.743-222delA c.743-222delA	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/2	chrX	120984121
chrX:120984151	G G	A A	1	a0001c0001t0001g0027 a0001c0001t0001g0027	1	NA18998.hp1 NA18998.hp1	intron_variant	MODIFIER	c.743-251C>T c.743-251C>T	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/2	chrX	120984151
chrX:120984304	T T	C C	4	a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 others(1): Show a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0012	22	HG00140.hp1 HG00544.hp2 HG00558.hp1 others(19): Show HG00140.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp2 HG01123.hp2 HG01978.hp2 HG02056.hp1 HG02735.hp1 HG02818.hp1 HG03195.hp2 HG03491.hp2 HG03927.hp1 HG03927.hp2 NA18950.hp2 NA18979.hp1 NA18980.hp2 NA18991.hp2 NA19012.hp1 NA19063.hp1 NA19068.hp1 NA19240.hp1 NA20300.hp1	intron_variant	MODIFIER	c.743-404A>G c.743-404A>G	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/2	chrX	120984304
chrX:120984433	T T	G G	1	a0001c0001t0001g0007 a0001c0001t0001g0007	7	HG01496.hp1 HG02258.hp1 HG02280.hp1 others(4): Show HG01496.hp1 HG02258.hp1 HG02280.hp1 HG02615.hp1 HG02622.hp2 HG03130.hp1 HG03540.hp1	intron_variant	MODIFIER	c.742+355A>C c.742+355A>C	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/2	chrX	120984433
chrX:120984440	T T	C C	1	a0001c0001t0001g0028 a0001c0001t0001g0028	1	HG02083.hp1 HG02083.hp1	intron_variant	MODIFIER	c.742+348A>G c.742+348A>G	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/2	chrX	120984440
chrX:120984671	G G	GC GC	1	a0006c0008t0001g0019 a0006c0008t0001g0019	1	NA18985.hp1 NA18985.hp1	intron_variant	MODIFIER	c.742+116dupG c.742+116dupG	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/2	chrX	120984671
chrX:120984712	G G	A A	1	a0001c0001t0001g0029 a0001c0001t0001g0029	1	HG02486.hp1 HG02486.hp1	intron_variant	MODIFIER	c.742+76C>T c.742+76C>T	CT47A1	ENSG00000236371.6	transcript	ENST00000433030.4	protein_coding	1/2	chrX	120984712

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🧬 JoGo Online Haplotype Explorer CT47A1_chrX_120977476_120990760

JoGo Local Haplotype Explorer (on iGV) CT47A1_chrX_120977476_120990760

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 8)

CCoding Level Haplotype Info (Total: 14)

TTranscript Level Haplotype Info (Total: 5)

GGenebody Level Haplotype Info (Total: 37)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 14)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 18)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 37)

Haplotype Details by Sample (Haploid Level) (Total: 302)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 7)

CCoding Level Variants (Synonymous Mutations) (Total: 5)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 4)

GGenebody Level Haplotype Variants (Intron) (Total: 18)

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Annotation (Repeats)

Annotation (SNP Array)