Item | Value |
---|---|
geneid | 728072 |
ensemblid | ENSG00000237957.6 |
hgncid | 33286 |
symbol | CT47A5 |
name | cancer/testis antigen family 47 member A5 |
refseq_nuc | NM_001080142.2 |
refseq_prot | NP_001073611.1 |
ensembl_nuc | ENST00000439466.3 |
ensembl_prot | ENSP00000390070.2 |
mane_status | MANE Select |
chr | chrX |
start | 120963026 |
end | 120966348 |
strand | - |
ver | v1.2 |
region | chrX:120963026-120966348 |
region5000 | chrX:120958026-120971348 |
regionname0 | CT47A5_chrX_120963026_120966348 |
regionname5000 | CT47A5_chrX_120958026_120971348 |
ahapid | grch38/chm13v2 | alen | total | AFR | AMR | EAS | EUR | SAS | JPT | regionname | genename | aa | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001 | 0/0 | 288 | 115 | 28 | 34 | 29 | 8 | 16 | 18 | CT47A5_chrX_120958026_120971348 | CT47A5 | MSATG others(283): Show |
chrX | 120958026 | 120971348 |
a0002 | 0/0 | 288 | 7 | 6 | 1 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | MSATG others(283): Show |
chrX | 120958026 | 120971348 |
a0003 | 0/0 | 288 | 3 | 0 | 2 | 1 | 0 | 0 | 1 | CT47A5_chrX_120958026_120971348 | CT47A5 | MSATG others(283): Show |
chrX | 120958026 | 120971348 |
a0004 | 0/0 | 288 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | MSATG others(283): Show |
chrX | 120958026 | 120971348 |
a0005 | 0/0 | 288 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | MSATG others(283): Show |
chrX | 120958026 | 120971348 |
a0006 | 0/0 | 288 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | MSATG others(283): Show |
chrX | 120958026 | 120971348 |
a0007 | 0/0 | 288 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | MSATG others(283): Show |
chrX | 120958026 | 120971348 |
a0008 | 0/0 | 288 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | CT47A5_chrX_120958026_120971348 | CT47A5 | MSATG others(283): Show |
chrX | 120958026 | 120971348 |
achapid | grch38/chm13v2 | alen | clen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | aseq | cseq | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001c0001 | 0/0 | 864 | 104 | 24 | 30 | 27 | 8 | 15 | CT47A5_chrX_120958026_120971348 | CT47A5 | ATGTC others(859): Show |
chrX | 120958026 | 120971348 | ||
a0001c0002 | 0/0 | 864 | 8 | 3 | 3 | 2 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | ATGTC others(859): Show |
chrX | 120958026 | 120971348 | ||
a0001c0004 | 0/0 | 864 | 2 | 0 | 1 | 0 | 0 | 1 | CT47A5_chrX_120958026_120971348 | CT47A5 | ATGTC others(859): Show |
chrX | 120958026 | 120971348 | ||
a0001c0008 | 0/0 | 864 | 1 | 1 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | ATGTC others(859): Show |
chrX | 120958026 | 120971348 | ||
a0002c0003 | 0/0 | 864 | 7 | 6 | 1 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | ATGTC others(859): Show |
chrX | 120958026 | 120971348 | ||
a0003c0005 | 0/0 | 864 | 2 | 0 | 2 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | ATGTC others(859): Show |
chrX | 120958026 | 120971348 | ||
a0003c0010 | 0/0 | 864 | 1 | 0 | 0 | 1 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | ATGTC others(859): Show |
chrX | 120958026 | 120971348 | ||
a0004c0011 | 0/0 | 864 | 1 | 1 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | ATGTC others(859): Show |
chrX | 120958026 | 120971348 | ||
a0005c0012 | 0/0 | 864 | 1 | 1 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | ATGTC others(859): Show |
chrX | 120958026 | 120971348 | ||
a0006c0007 | 0/0 | 864 | 1 | 1 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | ATGTC others(859): Show |
chrX | 120958026 | 120971348 | ||
a0007c0006 | 0/0 | 864 | 1 | 0 | 0 | 0 | 0 | 1 | CT47A5_chrX_120958026_120971348 | CT47A5 | ATGTC others(859): Show |
chrX | 120958026 | 120971348 | ||
a0008c0009 | 0/0 | 864 | 1 | 0 | 0 | 1 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | ATGTC others(859): Show |
chrX | 120958026 | 120971348 |
acthapid | grch38chm13v2 | tlen | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | tseq | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001c0001t0001 | 0/0 | 1298 | 74 | 17 | 18 | 22 | 5 | 12 | CT47A5_chrX_120958026_120971348 | CT47A5 | GCCAA others(1293): Show |
chrX | 120958026 | 120971348 |
a0001c0001t0002 | 0/0 | 1298 | 24 | 7 | 8 | 5 | 1 | 3 | CT47A5_chrX_120958026_120971348 | CT47A5 | GCCGA others(1293): Show |
chrX | 120958026 | 120971348 |
a0001c0001t0003 | 0/0 | 1298 | 5 | 0 | 3 | 0 | 2 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | GCCGA others(1293): Show |
chrX | 120958026 | 120971348 |
a0001c0001t0005 | 0/0 | 1298 | 1 | 0 | 1 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | GCCGA others(1293): Show |
chrX | 120958026 | 120971348 |
a0001c0002t0002 | 0/0 | 1298 | 6 | 2 | 2 | 2 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | GCCGA others(1293): Show |
chrX | 120958026 | 120971348 |
a0001c0002t0003 | 0/0 | 1298 | 1 | 0 | 1 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | GCCGA others(1293): Show |
chrX | 120958026 | 120971348 |
a0001c0002t0006 | 0/0 | 1298 | 1 | 1 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | GCCGA others(1293): Show |
chrX | 120958026 | 120971348 |
a0001c0004t0001 | 0/0 | 1298 | 1 | 0 | 1 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | GCCAA others(1293): Show |
chrX | 120958026 | 120971348 |
a0001c0004t0004 | 0/0 | 1288 | 1 | 0 | 0 | 0 | 0 | 1 | CT47A5_chrX_120958026_120971348 | CT47A5 | GCCAA others(1283): Show |
chrX | 120958026 | 120971348 |
a0001c0008t0001 | 0/0 | 1298 | 1 | 1 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | GCCAA others(1293): Show |
chrX | 120958026 | 120971348 |
a0002c0003t0001 | 0/0 | 1298 | 6 | 5 | 1 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | GCCAA others(1293): Show |
chrX | 120958026 | 120971348 |
a0002c0003t0002 | 0/0 | 1298 | 1 | 1 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | GCCGA others(1293): Show |
chrX | 120958026 | 120971348 |
a0003c0005t0001 | 0/0 | 1298 | 2 | 0 | 2 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | GCCAA others(1293): Show |
chrX | 120958026 | 120971348 |
a0003c0010t0001 | 0/0 | 1298 | 1 | 0 | 0 | 1 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | GCCAA others(1293): Show |
chrX | 120958026 | 120971348 |
a0004c0011t0001 | 0/0 | 1298 | 1 | 1 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | GCCAA others(1293): Show |
chrX | 120958026 | 120971348 |
a0005c0012t0001 | 0/0 | 1298 | 1 | 1 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | GCCAA others(1293): Show |
chrX | 120958026 | 120971348 |
a0006c0007t0001 | 0/0 | 1298 | 1 | 1 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | GCCAA others(1293): Show |
chrX | 120958026 | 120971348 |
a0007c0006t0001 | 0/0 | 1298 | 1 | 0 | 0 | 0 | 0 | 1 | CT47A5_chrX_120958026_120971348 | CT47A5 | GCCAA others(1293): Show |
chrX | 120958026 | 120971348 |
a0008c0009t0001 | 0/0 | 1298 | 1 | 0 | 0 | 1 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | GCCAA others(1293): Show |
chrX | 120958026 | 120971348 |
actghapid | grch38/chm13v2 | total | AFR | AMR | EAS | EUR | SAS | regionname | genename | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|
a0001c0001t0001g0001 | 0/0 | 32 | 0 | 12 | 9 | 4 | 7 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0001t0001g0003 | 0/0 | 14 | 11 | 2 | 0 | 0 | 1 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0001t0001g0004 | 0/0 | 13 | 1 | 3 | 6 | 1 | 2 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0001t0001g0009 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0001t0001g0010 | 0/0 | 2 | 0 | 0 | 2 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0001t0001g0011 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0001t0001g0012 | 0/0 | 2 | 2 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0001t0001g0017 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0001t0001g0018 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0001t0001g0019 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0001t0001g0020 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0001t0001g0021 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0001t0001g0022 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0001t0001g0023 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0001t0002g0002 | 0/0 | 23 | 6 | 8 | 5 | 1 | 3 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0001t0002g0031 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0001t0003g0007 | 0/0 | 5 | 0 | 3 | 0 | 2 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0001t0005g0029 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0002t0002g0006 | 0/0 | 6 | 2 | 2 | 2 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0002t0003g0030 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0002t0006g0033 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0004t0001g0016 | 0/0 | 1 | 0 | 1 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0004t0004g0028 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0001c0008t0001g0015 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0002c0003t0001g0005 | 0/0 | 6 | 5 | 1 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0002c0003t0002g0032 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0003c0005t0001g0008 | 0/0 | 2 | 0 | 2 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0003c0010t0001g0025 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0004c0011t0001g0026 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0005c0012t0001g0027 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0006c0007t0001g0014 | 0/0 | 1 | 1 | 0 | 0 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0007c0006t0001g0013 | 0/0 | 1 | 0 | 0 | 0 | 0 | 1 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
a0008c0009t0001g0024 | 0/0 | 1 | 0 | 0 | 1 | 0 | 0 | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
sampleid | ID haplotypeid
|
ahapid | chapid | thapid | ghapid | gpopname | popname | regionname | genename | chr | start | end |
---|---|---|---|---|---|---|---|---|---|---|---|---|
HG00140 | hp1 | a0001 | c0001 | t0001 | g0004 | EUR | GBR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG00323 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | FIN | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG00323 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | FIN | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG00558 | hp1 | a0001 | c0001 | t0001 | g0009 | EAS | CHS | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG00558 | hp2 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG00597 | hp1 | a0001 | c0001 | t0001 | g0009 | EAS | CHS | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG00597 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | CHS | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG00609 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | CHS | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG00621 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | CHS | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG00642 | hp1 | a0001 | c0004 | t0001 | g0016 | AMR | PUR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG00733 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG00733 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG00735 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG00735 | hp2 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG00738 | hp1 | a0003 | c0005 | t0001 | g0008 | AMR | PUR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG00741 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG00741 | hp2 | a0001 | c0001 | t0002 | g0002 | AMR | PUR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01069 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01071 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01071 | hp2 | a0001 | c0001 | t0003 | g0007 | AMR | PUR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01074 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01106 | hp1 | a0001 | c0002 | t0002 | g0006 | AMR | PUR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01109 | hp1 | a0001 | c0001 | t0002 | g0002 | AMR | PUR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01169 | hp1 | a0001 | c0002 | t0002 | g0006 | AMR | PUR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01169 | hp2 | a0002 | c0003 | t0001 | g0005 | AMR | PUR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01175 | hp1 | a0001 | c0001 | t0002 | g0002 | AMR | PUR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01175 | hp2 | a0001 | c0002 | t0003 | g0030 | AMR | PUR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01192 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PUR | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01255 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | CLM | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01261 | hp1 | a0001 | c0001 | t0002 | g0002 | AMR | CLM | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01346 | hp1 | a0001 | c0001 | t0002 | g0002 | AMR | CLM | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01346 | hp2 | a0001 | c0001 | t0001 | g0003 | AMR | CLM | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01358 | hp1 | a0001 | c0001 | t0002 | g0002 | AMR | CLM | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01361 | hp1 | a0001 | c0001 | t0003 | g0007 | AMR | CLM | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01361 | hp2 | a0001 | c0001 | t0001 | g0003 | AMR | CLM | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01433 | hp1 | a0001 | c0001 | t0003 | g0007 | AMR | CLM | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01515 | hp1 | a0001 | c0001 | t0003 | g0007 | EUR | IBS | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01517 | hp1 | a0001 | c0001 | t0003 | g0007 | EUR | IBS | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01517 | hp2 | a0001 | c0001 | t0001 | g0001 | EUR | IBS | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01928 | hp1 | a0003 | c0005 | t0001 | g0008 | AMR | PEL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01934 | hp1 | a0001 | c0001 | t0002 | g0002 | AMR | PEL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01975 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01975 | hp2 | a0001 | c0001 | t0001 | g0004 | AMR | PEL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01981 | hp1 | a0001 | c0001 | t0002 | g0002 | AMR | PEL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01981 | hp2 | a0001 | c0001 | t0001 | g0004 | AMR | PEL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02004 | hp1 | a0001 | c0001 | t0001 | g0001 | AMR | PEL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02004 | hp2 | a0001 | c0001 | t0001 | g0004 | AMR | PEL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02015 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02074 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | KHV | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02132 | hp1 | a0001 | c0001 | t0002 | g0002 | EAS | KHV | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02135 | hp1 | a0001 | c0001 | t0001 | g0018 | EAS | KHV | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02257 | hp1 | a0001 | c0001 | t0001 | g0011 | AFR | ACB | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02257 | hp2 | a0001 | c0001 | t0002 | g0002 | AFR | ACB | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02258 | hp1 | a0001 | c0001 | t0001 | g0012 | AFR | ACB | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02615 | hp1 | a0001 | c0001 | t0001 | g0003 | AFR | GWD | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02615 | hp2 | a0001 | c0001 | t0001 | g0003 | AFR | GWD | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02622 | hp1 | a0001 | c0001 | t0001 | g0004 | AFR | GWD | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02622 | hp2 | a0001 | c0001 | t0001 | g0003 | AFR | GWD | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02630 | hp1 | a0001 | c0001 | t0001 | g0003 | AFR | GWD | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02630 | hp2 | a0001 | c0001 | t0002 | g0031 | AFR | GWD | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02647 | hp1 | a0001 | c0001 | t0002 | g0002 | AFR | GWD | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02683 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02683 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02717 | hp1 | a0001 | c0001 | t0002 | g0002 | AFR | GWD | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02723 | hp1 | a0001 | c0008 | t0001 | g0015 | AFR | GWD | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02723 | hp2 | a0002 | c0003 | t0001 | g0005 | AFR | GWD | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02735 | hp1 | a0001 | c0001 | t0001 | g0019 | SAS | PJL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02738 | hp1 | a0001 | c0001 | t0001 | g0004 | SAS | PJL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02886 | hp1 | a0001 | c0001 | t0001 | g0020 | AFR | GWD | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02886 | hp2 | a0001 | c0001 | t0002 | g0002 | AFR | GWD | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02896 | hp1 | a0001 | c0001 | t0001 | g0003 | AFR | GWD | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02896 | hp2 | a0001 | c0001 | t0001 | g0003 | AFR | GWD | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02965 | hp1 | a0001 | c0001 | t0001 | g0003 | AFR | ESN | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02970 | hp1 | a0002 | c0003 | t0001 | g0005 | AFR | ESN | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02970 | hp2 | a0001 | c0001 | t0002 | g0002 | AFR | ESN | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG03130 | hp1 | a0001 | c0001 | t0001 | g0012 | AFR | ESN | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG03195 | hp1 | a0005 | c0012 | t0001 | g0027 | AFR | ESN | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG03195 | hp2 | a0002 | c0003 | t0001 | g0005 | AFR | ESN | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG03209 | hp1 | a0002 | c0003 | t0002 | g0032 | AFR | MSL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG03453 | hp1 | a0001 | c0002 | t0002 | g0006 | AFR | MSL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG03453 | hp2 | a0006 | c0007 | t0001 | g0014 | AFR | MSL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG03486 | hp1 | a0002 | c0003 | t0001 | g0005 | AFR | MSL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG03486 | hp2 | a0001 | c0001 | t0001 | g0003 | AFR | MSL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG03490 | hp1 | a0001 | c0001 | t0002 | g0002 | SAS | PJL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG03492 | hp1 | a0001 | c0001 | t0002 | g0002 | SAS | PJL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG03654 | hp1 | a0007 | c0006 | t0001 | g0013 | SAS | PJL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG03688 | hp1 | a0001 | c0001 | t0001 | g0003 | SAS | STU | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG03704 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | PJL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG03704 | hp2 | a0001 | c0001 | t0001 | g0004 | SAS | PJL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG03831 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG03831 | hp2 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG03942 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | BEB | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG04115 | hp1 | a0001 | c0001 | t0001 | g0022 | SAS | STU | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG04204 | hp1 | a0001 | c0001 | t0001 | g0001 | SAS | STU | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG04228 | hp1 | a0001 | c0004 | t0004 | g0028 | SAS | STU | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA18747 | hp1 | a0001 | c0001 | t0002 | g0002 | EAS | CHB | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA18941 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA18941 | hp2 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA18943 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA18944 | hp1 | a0001 | c0001 | t0001 | g0021 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA18948 | hp1 | a0008 | c0009 | t0001 | g0024 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA18960 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA18982 | hp1 | a0001 | c0002 | t0002 | g0006 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA18983 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA18988 | hp1 | a0001 | c0001 | t0001 | g0010 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA18992 | hp1 | a0001 | c0001 | t0002 | g0002 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA18992 | hp2 | a0001 | c0001 | t0001 | g0010 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA19004 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA19043 | hp1 | a0001 | c0001 | t0001 | g0003 | AFR | LWK | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA19055 | hp1 | a0001 | c0001 | t0001 | g0017 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA19070 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA19074 | hp1 | a0001 | c0001 | t0001 | g0004 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA19074 | hp2 | a0001 | c0001 | t0002 | g0002 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA19085 | hp1 | a0001 | c0001 | t0002 | g0002 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA19090 | hp1 | a0001 | c0001 | t0001 | g0001 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA19090 | hp2 | a0001 | c0002 | t0002 | g0006 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA19091 | hp1 | a0003 | c0010 | t0001 | g0025 | EAS | JPT | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA20752 | hp1 | a0001 | c0001 | t0002 | g0002 | EUR | TSI | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA20805 | hp1 | a0001 | c0001 | t0001 | g0001 | EUR | TSI | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
NA20905 | hp1 | a0001 | c0001 | t0002 | g0002 | SAS | GIH | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01123 | hp1 | a0001 | c0001 | t0005 | g0029 | AMR | CLM | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG01123 | hp2 | a0001 | c0001 | t0001 | g0023 | AMR | CLM | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02109 | hp1 | a0001 | c0002 | t0006 | g0033 | AFR | ACB | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02109 | hp2 | a0001 | c0002 | t0002 | g0006 | AFR | ACB | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02486 | hp1 | a0001 | c0001 | t0001 | g0003 | AFR | ACB | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02559 | hp1 | a0004 | c0011 | t0001 | g0026 | AFR | ACB | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG02559 | hp2 | a0001 | c0001 | t0002 | g0002 | AFR | ACB | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG03471 | hp1 | a0001 | c0001 | t0001 | g0003 | AFR | MSL | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG06807 | hp1 | a0001 | c0001 | t0001 | g0011 | AFR | USA | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
HG06807 | hp2 | a0002 | c0003 | t0001 | g0005 | AFR | USA | CT47A5_chrX_120958026_120971348 | CT47A5 | chrX | 120958026 | 120971348 |
view | chr:pos | ref | alt | # # of ahapid:amino-acid(protein) level |
ahapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chrX:120964422 | C | G | 1 | a0003 | 3 | HG00738.hp1 HG01928.hp1 NA19091.hp1 |
missense_variant | MODERATE | c.781G>C | p.Ala261Pro | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 2/3 | 1040/1298 | 781/867 | 261/288 | chrX | 120964422 | |||
chrX:120965459 | G | C | 2 | a0002 a0006 |
8 | HG01169.hp2 HG02723.hp2 HG02970.hp1 others(5): Show |
missense_variant | MODERATE | c.631C>G | p.Pro211Ala | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/3 | 890/1298 | 631/867 | 211/288 | chrX | 120965459 | |||
chrX:120965590 | G | A | 1 | a0008 | 1 | NA18948.hp1 | missense_variant | MODERATE | c.500C>T | p.Pro167Leu | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/3 | 759/1298 | 500/867 | 167/288 | chrX | 120965590 | |||
chrX:120965590 | G | T | 1 | a0006 | 1 | HG03453.hp2 | missense_variant | MODERATE | c.500C>A | p.Pro167Gln | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/3 | 759/1298 | 500/867 | 167/288 | chrX | 120965590 | |||
chrX:120965860 | C | T | 1 | a0007 | 1 | HG03654.hp1 | missense_variant | MODERATE | c.230G>A | p.Arg77Gln | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/3 | 489/1298 | 230/867 | 77/288 | chrX | 120965860 | |||
chrX:120965864 | G | A | 1 | a0004 | 1 | HG02559.hp1 | missense_variant | MODERATE | c.226C>T | p.Pro76Ser | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/3 | 485/1298 | 226/867 | 76/288 | chrX | 120965864 | |||
chrX:120965872 | G | C | 1 | a0004 | 1 | HG02559.hp1 | missense_variant | MODERATE | c.218C>G | p.Ala73Gly | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/3 | 477/1298 | 218/867 | 73/288 | chrX | 120965872 | |||
chrX:120966019 | T | C | 1 | a0005 | 1 | HG03195.hp1 | missense_variant | MODERATE | c.71A>G | p.Gln24Arg | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/3 | 330/1298 | 71/867 | 24/288 | chrX | 120966019 |
view | chr:pos | ref | alt | # # of chapid |
chapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chrX:120964369 | C | T | 1 | a0001c0004 | 2 | HG00642.hp1 HG04228.hp1 |
synonymous_variant | LOW | c.834G>A | p.Ala278Ala | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 2/3 | 1093/1298 | 834/867 | 278/288 | chrX | 120964369 | |||
chrX:120965391 | C | T | 1 | a0001c0004 | 2 | HG00642.hp1 HG04228.hp1 |
synonymous_variant | LOW | c.699G>A | p.Pro233Pro | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/3 | 958/1298 | 699/867 | 233/288 | chrX | 120965391 | |||
chrX:120965475 | G | C | 2 | a0001c0002 a0007c0006 |
9 | HG01106.hp1 HG01169.hp1 HG01175.hp2 others(6): Show |
synonymous_variant | LOW | c.615C>G | p.Ala205Ala | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/3 | 874/1298 | 615/867 | 205/288 | chrX | 120965475 | |||
chrX:120965580 | C | T | 1 | a0001c0008 | 1 | HG02723.hp1 | synonymous_variant | LOW | c.510G>A | p.Leu170Leu | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/3 | 769/1298 | 510/867 | 170/288 | chrX | 120965580 | |||
chrX:120965628 | T | G | 1 | a0003c0010 | 1 | NA19091.hp1 | synonymous_variant | LOW | c.462A>C | p.Pro154Pro | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/3 | 721/1298 | 462/867 | 154/288 | chrX | 120965628 |
view | chr:pos | ref | alt | # # of thapid:transcript level |
thapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chrX:120966166 | T | C | 1 | a0001c0002t0006 | 1 | HG02109.hp1 | 5_prime_UTR_variant | MODIFIER | c.-77A>G | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/3 | 77 | chrX | 120966166 | ||||||
chrX:120966179 | AGGCGAGG others(3): Show |
A | 1 | a0001c0004t0004 | 1 | HG04228.hp1 | 5_prime_UTR_variant | MODIFIER | c.-100_-91delGCTCCTC others(3): Show |
CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/3 | 91 | chrX | 120966179 | ||||||
chrX:120966204 | A | G | 3 | a0001c0001t0003 a0001c0001t0005 a0001c0002t0003 |
7 | HG01071.hp2 HG01123.hp1 HG01175.hp2 others(4): Show |
5_prime_UTR_variant | MODIFIER | c.-115T>C | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/3 | 115 | chrX | 120966204 | ||||||
chrX:120966303 | G | T | 1 | a0001c0001t0005 | 1 | HG01123.hp1 | 5_prime_UTR_variant | MODIFIER | c.-214C>A | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/3 | 214 | chrX | 120966303 | ||||||
chrX:120966345 | T | C | 7 | a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(4): Show |
39 | HG00741.hp2 HG01071.hp2 HG01106.hp1 others(36): Show |
5_prime_UTR_variant | MODIFIER | c.-256A>G | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/3 | 256 | chrX | 120966345 |
view | chr:pos | ref | alt | # # of ghapid:genebody level |
ghapids | # # of haplotypeids |
haplotypeids | annotation | impact | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | genebody_biotype | rank | cdna cdna pos length |
cds cds pos length |
aa aa pos length |
distance | status | chr | pos |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
chrX:120963220 | G | A | 22 | a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0010 others(19): Show |
86 | HG00140.hp1 HG00597.hp2 HG00621.hp1 others(83): Show |
intron_variant | MODIFIER | c.*32-54C>T | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 2/2 | chrX | 120963220 | |||||||
chrX:120963534 | T | G | 1 | a0001c0001t0001g0020 | 1 | HG02886.hp1 | intron_variant | MODIFIER | c.*32-368A>C | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 2/2 | chrX | 120963534 | |||||||
chrX:120963585 | CG | C | 2 | a0001c0001t0001g0011 a0001c0001t0001g0018 |
3 | HG02135.hp1 HG02257.hp1 HG06807.hp1 |
intron_variant | MODIFIER | c.*32-420delC | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 2/2 | chrX | 120963585 | |||||||
chrX:120963810 | T | C | 9 | a0001c0001t0001g0004 a0001c0001t0001g0010 a0001c0001t0001g0011 others(6): Show |
23 | HG00140.hp1 HG00597.hp2 HG00621.hp1 others(20): Show |
intron_variant | MODIFIER | c.*31+495A>G | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 2/2 | chrX | 120963810 | |||||||
chrX:120964093 | A | G | 3 | a0001c0001t0001g0010 a0001c0001t0001g0022 a0001c0001t0001g0023 |
4 | HG01123.hp2 HG04115.hp1 NA18988.hp1 others(1): Show |
intron_variant | MODIFIER | c.*31+212T>C | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 2/2 | chrX | 120964093 | |||||||
chrX:120964170 | A | T | 1 | a0001c0001t0001g0009 | 2 | HG00558.hp1 HG00597.hp1 |
intron_variant | MODIFIER | c.*31+135T>A | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 2/2 | chrX | 120964170 | |||||||
chrX:120964278 | G | C | 1 | a0001c0001t0001g0021 | 1 | NA18944.hp1 | intron_variant | MODIFIER | c.*31+27C>G | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 2/2 | chrX | 120964278 | |||||||
chrX:120964756 | C | T | 1 | a0001c0001t0001g0022 | 1 | HG04115.hp1 | intron_variant | MODIFIER | c.743-296G>A | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/2 | chrX | 120964756 | |||||||
chrX:120964864 | T | C | 10 | a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0010 others(7): Show |
25 | HG00140.hp1 HG00558.hp1 HG00597.hp1 others(22): Show |
intron_variant | MODIFIER | c.743-404A>G | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/2 | chrX | 120964864 | |||||||
chrX:120964978 | G | A | 1 | a0001c0001t0001g0023 | 1 | HG01123.hp2 | intron_variant | MODIFIER | c.742+370C>T | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/2 | chrX | 120964978 | |||||||
chrX:120964993 | T | G | 1 | a0001c0001t0001g0012 | 2 | HG02258.hp1 HG03130.hp1 |
intron_variant | MODIFIER | c.742+355A>C | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/2 | chrX | 120964993 | |||||||
chrX:120965040 | C | G | 1 | a0001c0001t0001g0019 | 1 | HG02735.hp1 | intron_variant | MODIFIER | c.742+308G>C | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/2 | chrX | 120965040 | |||||||
chrX:120965227 | C | T | 1 | a0001c0001t0001g0018 | 1 | HG02135.hp1 | intron_variant | MODIFIER | c.742+121G>A | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/2 | chrX | 120965227 | |||||||
chrX:120965295 | C | T | 1 | a0001c0001t0001g0017 | 1 | NA19055.hp1 | intron_variant | MODIFIER | c.742+53G>A | CT47A5 | ENSG00000237957.6 | transcript | ENST00000439466.3 | protein_coding | 1/2 | chrX | 120965295 |