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geneid	246100
ensemblid	ENSG00000268651.4
hgncid	24198
symbol	CTAG1A
name	cancer/testis antigen 1A
refseq_nuc	NM_139250.2
refseq_prot	NP_640343.1
ensembl_nuc	ENST00000599837.3
ensembl_prot	ENSP00000469441.1
mane_status	MANE Select
chr	chrX
start	154585133
end	154586816
strand	+
ver	v1.2
region	chrX:154585133-154586816
region5000	chrX:154580133-154591816
regionname0	CTAG1A_chrX_154585133_154586816
regionname5000	CTAG1A_chrX_154580133_154591816

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0000	0/0	0	5	5	0	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0001	0/0	180	275	67	62	106	13	27	82	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0002	0/0	15	2	0	0	2	0	0	2	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0003	0/0	180	1	1	0	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0004	0/0	72	1	0	0	1	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0005	0/0	88	1	0	0	0	0	1	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0006	0/0	180	1	0	0	0	0	1	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0007	0/0	180	1	0	0	0	0	1	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0008	0/0	180	1	1	0	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0009	0/0	88	1	0	0	1	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0010	0/0	88	1	0	0	1	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0011	0/0	132	1	0	0	1	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0012	0/0	74	1	0	0	1	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0013	0/0	180	1	0	0	1	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	0/0	543	275	67	62	106	13	27	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
c0002	0/0	544	5	5	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
c0003	0/0	543	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
c0004	0/0	544	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
c0005	0/0	548	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
c0006	0/0	543	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
c0007	0/0	552	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
c0008	0/0	542	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
c0009	0/0	544	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
c0010	0/0	545	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
c0011	0/0	543	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
c0012	0/0	543	1	0	0	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
c0013	0/0	543	1	0	0	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
c0014	0/0	544	1	0	0	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
c0015	0/0	545	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	0/0	227	287	71	60	113	13	30	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
t0002	0/0	227	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
t0003	0/0	227	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
t0004	0/0	227	1	0	1	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
t0005	0/0	227	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
t0006	0/0	227	1	0	1	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
t0007	0/0	229	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/0	200	34	47	91	12	16	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0002	0/0	43	21	8	3	1	10	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0003	0/0	7	7	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0004	0/0	6	1	1	3	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0005	0/0	5	0	5	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0006	0/0	3	3	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0007	0/0	2	0	0	2	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0008	0/0	2	2	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0009	0/0	2	0	1	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0010	0/0	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0011	0/0	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0012	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0013	0/0	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0014	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0015	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0016	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0017	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0018	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0019	0/0	1	0	0	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0020	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0021	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0022	0/0	1	0	0	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0023	0/0	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0024	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0025	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0026	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0027	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0028	0/0	1	0	0	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0029	0/0	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0030	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0031	0/0	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
g0032	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0000c0002	0/0	544	5	5	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0001c0001	0/0	543	275	67	62	106	13	27	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0002c0004	0/0	544	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0002c0005	0/0	548	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0003c0003	0/0	543	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0004c0015	0/0	545	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0005c0014	0/0	544	1	0	0	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0006c0013	0/0	543	1	0	0	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0007c0012	0/0	543	1	0	0	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0008c0011	0/0	543	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0009c0010	0/0	545	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0010c0009	0/0	544	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0011c0008	0/0	542	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0012c0007	0/0	552	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0013c0006	0/0	543	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0000c0002t0001	0/0	770	5	5	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0001c0001t0001	0/0	769	270	64	60	106	13	27	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0001c0001t0002	0/0	769	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0001c0001t0003	0/0	769	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0001c0001t0004	0/0	769	1	0	1	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0001c0001t0005	0/0	769	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0001c0001t0006	0/0	769	1	0	1	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0002c0004t0001	0/0	770	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0002c0005t0001	0/0	774	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0003c0003t0001	0/0	769	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0004c0015t0001	0/0	771	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0005c0014t0001	0/0	770	1	0	0	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0006c0013t0001	0/0	769	1	0	0	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0007c0012t0001	0/0	769	1	0	0	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0008c0011t0001	0/0	769	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0009c0010t0001	0/0	771	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0010c0009t0001	0/0	770	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0011c0008t0001	0/0	768	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0012c0007t0007	0/0	780	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816
a0013c0006t0001	0/0	769	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	copy fasta	chrX	154580133	154591816

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0000c0002t0001g0001	0/0	5	5	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0001	0/0	191	27	46	90	12	16	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0002	0/0	38	19	7	3	1	8	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0003	0/0	7	7	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0004	0/0	6	1	1	3	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0005	0/0	5	0	5	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0006	0/0	3	3	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0007	0/0	2	0	0	2	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0008	0/0	2	2	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0009	0/0	2	0	1	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0010	0/0	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0011	0/0	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0014	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0015	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0017	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0018	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0020	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0021	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0022	0/0	1	0	0	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0023	0/0	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0027	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0028	0/0	1	0	0	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0029	0/0	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0001g0031	0/0	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0002g0001	0/0	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0003g0002	0/0	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0004g0002	0/0	1	0	1	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0005g0001	0/0	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0001c0001t0006g0001	0/0	1	0	1	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0002c0004t0001g0012	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0002c0005t0001g0026	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0003c0003t0001g0013	0/0	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0004c0015t0001g0030	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0005c0014t0001g0019	0/0	1	0	0	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0006c0013t0001g0002	0/0	1	0	0	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0007c0012t0001g0002	0/0	1	0	0	0	0	1	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0008c0011t0001g0002	0/0	1	1	0	0	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0009c0010t0001g0032	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0010c0009t0001g0016	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0011c0008t0001g0024	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0012c0007t0007g0025	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
a0013c0006t0001g0001	0/0	1	0	0	1	0	0	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00099	hp1	a0001	c0001	t0001	g0001	EUR	GBR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00099	hp2	a0001	c0001	t0001	g0002	EUR	GBR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00140	hp1	a0001	c0001	t0001	g0001	EUR	GBR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00280	hp1	a0001	c0001	t0001	g0001	EUR	FIN	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00323	hp1	a0001	c0001	t0001	g0001	EUR	FIN	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00323	hp2	a0001	c0001	t0001	g0001	EUR	FIN	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00423	hp1	a0001	c0001	t0001	g0007	EAS	CHS	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00423	hp2	a0001	c0001	t0001	g0001	EAS	CHS	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00558	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00609	hp1	a0001	c0001	t0001	g0007	EAS	CHS	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00621	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00642	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00733	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00733	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00735	hp2	a0001	c0001	t0001	g0005	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00741	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG00741	hp2	a0001	c0001	t0001	g0004	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01070	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01099	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01167	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01168	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01168	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01169	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01175	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01243	hp1	a0001	c0001	t0001	g0002	AMR	PUR	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01256	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01257	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01257	hp2	a0001	c0001	t0001	g0002	AMR	CLM	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01258	hp1	a0001	c0001	t0001	g0002	AMR	CLM	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01261	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01346	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01346	hp2	a0001	c0001	t0001	g0005	AMR	CLM	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01358	hp1	a0001	c0001	t0004	g0002	AMR	CLM	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01361	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01361	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01496	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01496	hp2	a0001	c0001	t0006	g0001	AMR	CLM	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01515	hp1	a0001	c0001	t0001	g0001	EUR	IBS	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01516	hp1	a0001	c0001	t0001	g0001	EUR	IBS	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01516	hp2	a0001	c0001	t0001	g0001	EUR	IBS	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01517	hp1	a0001	c0001	t0001	g0001	EUR	IBS	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01517	hp2	a0001	c0001	t0001	g0001	EUR	IBS	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01884	hp1	a0008	c0011	t0001	g0002	AFR	ACB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01884	hp2	a0001	c0001	t0001	g0001	AFR	ACB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01891	hp1	a0001	c0001	t0001	g0006	AFR	ACB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01891	hp2	a0001	c0001	t0001	g0003	AFR	ACB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01934	hp2	a0001	c0001	t0001	g0002	AMR	PEL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01952	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01975	hp2	a0001	c0001	t0001	g0002	AMR	PEL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01981	hp1	a0001	c0001	t0001	g0002	AMR	PEL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01981	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01993	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01993	hp2	a0001	c0001	t0001	g0002	AMR	PEL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02004	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02004	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02055	hp1	a0001	c0001	t0001	g0031	AFR	ACB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02056	hp1	a0001	c0001	t0001	g0018	EAS	KHV	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02071	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02074	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02080	hp1	a0013	c0006	t0001	g0001	EAS	KHV	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02080	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02083	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02129	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02135	hp1	a0001	c0001	t0001	g0004	EAS	KHV	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02145	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02148	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02148	hp2	a0001	c0001	t0001	g0005	AMR	PEL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02155	hp1	a0001	c0001	t0001	g0001	EAS	CDX	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02155	hp2	a0001	c0001	t0001	g0002	EAS	CDX	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02257	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02257	hp2	a0001	c0001	t0001	g0002	AFR	ACB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02258	hp2	a0001	c0001	t0001	g0011	AFR	ACB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02273	hp1	a0001	c0001	t0001	g0005	AMR	PEL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02273	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02280	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02280	hp2	a0001	c0001	t0001	g0003	AFR	ACB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02293	hp1	a0001	c0001	t0001	g0009	AMR	PEL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02293	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02451	hp1	a0001	c0001	t0001	g0003	AFR	ACB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02451	hp2	a0001	c0001	t0001	g0002	AFR	ACB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02572	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02602	hp1	a0001	c0001	t0001	g0002	SAS	PJL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02615	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02615	hp2	a0001	c0001	t0001	g0010	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02622	hp1	a0000	c0002	t0001	g0001	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02622	hp2	a0001	c0001	t0001	g0002	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02630	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02630	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02647	hp1	a0000	c0002	t0001	g0001	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02683	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02683	hp2	a0001	c0001	t0001	g0002	SAS	PJL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02698	hp1	a0007	c0012	t0001	g0002	SAS	PJL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02717	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02723	hp1	a0001	c0001	t0001	g0002	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02723	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02738	hp1	a0001	c0001	t0001	g0028	SAS	PJL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02809	hp1	a0001	c0001	t0001	g0002	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02809	hp2	a0001	c0001	t0001	g0004	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02818	hp1	a0001	c0001	t0001	g0002	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02818	hp2	a0000	c0002	t0001	g0001	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02886	hp1	a0001	c0001	t0005	g0001	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02886	hp2	a0001	c0001	t0001	g0002	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02895	hp1	a0001	c0001	t0001	g0002	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02922	hp1	a0001	c0001	t0001	g0003	AFR	ESN	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02922	hp2	a0001	c0001	t0001	g0001	AFR	ESN	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02965	hp1	a0001	c0001	t0001	g0006	AFR	ESN	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02970	hp1	a0001	c0001	t0001	g0001	AFR	ESN	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02970	hp2	a0001	c0001	t0001	g0003	AFR	ESN	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02976	hp1	a0001	c0001	t0001	g0003	AFR	ESN	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02976	hp2	a0001	c0001	t0001	g0001	AFR	ESN	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03017	hp1	a0006	c0013	t0001	g0002	SAS	PJL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03041	hp1	a0001	c0001	t0001	g0008	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03041	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03098	hp1	a0001	c0001	t0001	g0023	AFR	MSL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03130	hp1	a0001	c0001	t0001	g0001	AFR	ESN	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03139	hp1	a0001	c0001	t0001	g0008	AFR	ESN	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03195	hp1	a0000	c0002	t0001	g0001	AFR	ESN	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03195	hp2	a0001	c0001	t0001	g0001	AFR	ESN	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03209	hp1	a0001	c0001	t0001	g0002	AFR	MSL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03225	hp1	a0003	c0003	t0001	g0013	AFR	MSL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03239	hp1	a0001	c0001	t0001	g0004	SAS	PJL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03239	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03453	hp1	a0001	c0001	t0001	g0001	AFR	MSL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03453	hp2	a0001	c0001	t0001	g0002	AFR	MSL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03486	hp1	a0001	c0001	t0001	g0002	AFR	MSL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03486	hp2	a0001	c0001	t0001	g0001	AFR	MSL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03490	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03491	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03492	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03516	hp1	a0001	c0001	t0001	g0002	AFR	ESN	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03516	hp2	a0001	c0001	t0001	g0001	AFR	ESN	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03540	hp1	a0001	c0001	t0001	g0002	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03540	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03579	hp1	a0001	c0001	t0001	g0002	AFR	MSL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03654	hp1	a0001	c0001	t0001	g0002	SAS	PJL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03669	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03669	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03688	hp1	a0001	c0001	t0001	g0022	SAS	STU	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03704	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03704	hp2	a0001	c0001	t0001	g0002	SAS	PJL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03710	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03834	hp1	a0001	c0001	t0001	g0002	SAS	BEB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03834	hp2	a0001	c0001	t0001	g0002	SAS	BEB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03927	hp1	a0005	c0014	t0001	g0019	SAS	BEB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03927	hp2	a0001	c0001	t0001	g0001	SAS	BEB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03942	hp1	a0001	c0001	t0001	g0002	SAS	BEB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG04199	hp1	a0001	c0001	t0001	g0001	SAS	STU	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18522	hp1	a0001	c0001	t0001	g0002	AFR	YRI	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18906	hp1	a0001	c0001	t0001	g0002	AFR	YRI	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18906	hp2	a0001	c0001	t0001	g0001	AFR	YRI	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18939	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18939	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18940	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18941	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18941	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18943	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18944	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18945	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18947	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18954	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18957	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18959	hp1	a0001	c0001	t0001	g0002	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18960	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18961	hp1	a0001	c0001	t0001	g0027	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18962	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18965	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18967	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18968	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18968	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18969	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18969	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18971	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18974	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18975	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18975	hp2	a0004	c0015	t0001	g0030	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18977	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18979	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18980	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18980	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18982	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18983	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18985	hp1	a0002	c0005	t0001	g0026	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18988	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18989	hp1	a0001	c0001	t0001	g0009	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18990	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18992	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18992	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18994	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18995	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18997	hp1	a0001	c0001	t0001	g0020	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18997	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19004	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19005	hp1	a0001	c0001	t0001	g0004	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19006	hp1	a0001	c0001	t0001	g0017	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19007	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19009	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19030	hp1	a0001	c0001	t0001	g0029	AFR	LWK	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19030	hp2	a0001	c0001	t0001	g0001	AFR	LWK	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19043	hp1	a0001	c0001	t0001	g0001	AFR	LWK	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19055	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19056	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19058	hp1	a0010	c0009	t0001	g0016	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19062	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19063	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19065	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19065	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19066	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19067	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19068	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19070	hp1	a0001	c0001	t0001	g0014	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19072	hp1	a0009	c0010	t0001	g0032	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19074	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19076	hp1	a0012	c0007	t0007	g0025	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19079	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19080	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19080	hp2	a0002	c0004	t0001	g0012	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19081	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19081	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19082	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19083	hp1	a0001	c0001	t0001	g0015	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19085	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19086	hp1	a0011	c0008	t0001	g0024	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19090	hp1	a0001	c0001	t0001	g0004	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19090	hp2	a0001	c0001	t0001	g0021	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19091	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19240	hp1	a0001	c0001	t0001	g0001	AFR	YRI	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA19240	hp2	a0001	c0001	t0001	g0003	AFR	YRI	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA20805	hp1	a0001	c0001	t0001	g0001	EUR	TSI	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA20905	hp1	a0001	c0001	t0001	g0002	SAS	GIH	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG01123	hp2	a0001	c0001	t0001	g0005	AMR	CLM	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02109	hp1	a0001	c0001	t0002	g0001	AFR	ACB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02109	hp2	a0001	c0001	t0001	g0006	AFR	ACB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02486	hp2	a0000	c0002	t0001	g0001	AFR	ACB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02559	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG02559	hp2	a0001	c0001	t0001	g0001	AFR	ACB	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG03471	hp1	a0001	c0001	t0001	g0002	AFR	MSL	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG06807	hp1	a0001	c0001	t0001	g0002	AFR	USA	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
HG06807	hp2	a0001	c0001	t0001	g0002	AFR	USA	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA18955	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA20300	hp1	a0001	c0001	t0001	g0001	AFR	USA	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816
NA20300	hp2	a0001	c0001	t0003	g0002	AFR	USA	CTAG1A_chrX_154580133_154591816	CTAG1A	chrX	154580133	154591816

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	status	chr	pos
chrX:154585223	G G	A A	1	a0003 a0003	1	HG03225.hp1 HG03225.hp1	missense_variant	MODERATE	c.17G>A c.17G>A	p.Arg6Gln p.Arg6Gln	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	91/769	17/543	6/180		chrX	154585223
chrX:154585230	A A	AG AG	1	a0002 a0002	2	NA18985.hp1 NA19080.hp2 NA18985.hp1 NA19080.hp2	frameshift_variant	HIGH	c.29dupG c.29dupG	p.Ser11fs p.Ser11fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	104/769	30/543	10/180	INFO_REALIGN_3_PRIME	chrX	154585230
chrX:154585249	G G	A A	1	a0013 a0013	1	HG02080.hp1 HG02080.hp1	missense_variant	MODERATE	c.43G>A c.43G>A	p.Ala15Thr p.Ala15Thr	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	117/769	43/543	15/180		chrX	154585249
chrX:154585252	G G	GA GA	1	a0012 a0012	1	NA19076.hp1 NA19076.hp1	frameshift_variant	HIGH	c.47dupA c.47dupA	p.Asp16fs p.Asp16fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	122/769	48/543	16/180	INFO_REALIGN_3_PRIME	chrX	154585252
chrX:154585256	GC GC	G G	1	a0011 a0011	1	NA19086.hp1 NA19086.hp1	frameshift_variant	HIGH	c.53delC c.53delC	p.Pro18fs p.Pro18fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	127/769	53/543	18/180	INFO_REALIGN_3_PRIME	chrX	154585256
chrX:154585263	A A	AG AG	1	a0012 a0012	1	NA19076.hp1 NA19076.hp1	frameshift_variant	HIGH	c.59dupG c.59dupG	p.Gly22fs p.Gly22fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	134/769	60/543	20/180	INFO_REALIGN_3_PRIME	chrX	154585263
chrX:154585287	A A	AG AG	1	a0002 a0002	1	NA18985.hp1 NA18985.hp1	frameshift_variant	HIGH	c.86dupG c.86dupG	p.Asn30fs p.Asn30fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	161/769	87/543	29/180	INFO_REALIGN_3_PRIME	chrX	154585287
chrX:154585316	C C	CG CG	1	a0010 a0010	1	NA19058.hp1 NA19058.hp1	frameshift_variant	HIGH	c.113dupG c.113dupG	p.Ala39fs p.Ala39fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	188/769	114/543	38/180	INFO_REALIGN_3_PRIME	chrX	154585316
chrX:154585317	G G	GT GT	1	a0011 a0011	1	NA19086.hp1 NA19086.hp1	frameshift_variant	HIGH	c.111_112insT c.111_112insT	p.Gly38fs p.Gly38fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	186/769	112/543	38/180		chrX	154585317
chrX:154585342	C C	CCG CCG	1	a0012 a0012	1	NA19076.hp1 NA19076.hp1	frameshift_variant	HIGH	c.136_137insCG c.136_137insCG	p.Arg46fs p.Arg46fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	211/769	137/543	46/180		chrX	154585342
chrX:154585352	G G	GGT GGT	1	a0012 a0012	1	NA19076.hp1 NA19076.hp1	frameshift_variant	HIGH	c.147_148insTG c.147_148insTG	p.Ala50fs p.Ala50fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	222/769	148/543	50/180	INFO_REALIGN_3_PRIME	chrX	154585352
chrX:154585367	C C	CG CG	1	a0004 a0004	1	NA18975.hp2 NA18975.hp2	frameshift_variant	HIGH	c.165dupG c.165dupG	p.Pro56fs p.Pro56fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	240/769	166/543	56/180	INFO_REALIGN_3_PRIME	chrX	154585367
chrX:154585377	A A	AG AG	1	a0012 a0012	1	NA19076.hp1 NA19076.hp1	frameshift_variant	HIGH	c.173dupG c.173dupG	p.Gly59fs p.Gly59fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	248/769	174/543	58/180	INFO_REALIGN_3_PRIME	chrX	154585377
chrX:154585384	G G	GC GC	1	a0012 a0012	1	NA19076.hp1 NA19076.hp1	frameshift_variant	HIGH	c.182dupC c.182dupC	p.Arg62fs p.Arg62fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	257/769	183/543	61/180	INFO_REALIGN_3_PRIME	chrX	154585384
chrX:154585387	C C	T T	1	a0003 a0003	1	HG03225.hp1 HG03225.hp1	missense_variant	MODERATE	c.181C>T c.181C>T	p.Pro61Ser p.Pro61Ser	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	255/769	181/543	61/180		chrX	154585387
chrX:154585390	C C	CG CG	1	a0004 a0004	1	NA18975.hp2 NA18975.hp2	frameshift_variant	HIGH	c.188dupG c.188dupG	p.Pro64fs p.Pro64fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	263/769	189/543	63/180	INFO_REALIGN_3_PRIME	chrX	154585390
chrX:154585440	C C	CG CG	1	a0012 a0012	1	NA19076.hp1 NA19076.hp1	frameshift_variant	HIGH	c.238dupG c.238dupG	p.Ala80fs p.Ala80fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	313/769	239/543	80/180	INFO_REALIGN_3_PRIME	chrX	154585440
chrX:154585447	A A	AG AG	2	a0002 a0005 a0002 a0005	2	HG03927.hp1 NA18985.hp1 HG03927.hp1 NA18985.hp1	frameshift_variant	HIGH	c.246dupG c.246dupG	p.Pro83fs p.Pro83fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	321/769	247/543	83/180	INFO_REALIGN_3_PRIME	chrX	154585447
chrX:154585462	C C	T T	1	a0006 a0006	1	HG03017.hp1 HG03017.hp1	missense_variant	MODERATE	c.256C>T c.256C>T	p.Arg86Cys p.Arg86Cys	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	330/769	256/543	86/180		chrX	154585462
chrX:154585463	G G	GC GC	1	a0009 a0009	1	NA19072.hp1 NA19072.hp1	frameshift_variant	HIGH	c.259dupC c.259dupC	p.Leu87fs p.Leu87fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	334/769	260/543	87/180	INFO_REALIGN_3_PRIME	chrX	154585463
chrX:154586183	G G	A A	1	a0008 a0008	1	HG01884.hp1 HG01884.hp1	missense_variant	MODERATE	c.301G>A c.301G>A	p.Glu101Lys p.Glu101Lys	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	2/3	375/769	301/543	101/180		chrX	154586183
chrX:154586219	G G	GC GC	1	a0002 a0002	1	NA18985.hp1 NA18985.hp1	frameshift_variant	HIGH	c.341dupC c.341dupC	p.Pro115fs p.Pro115fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	2/3	416/769	342/543	114/180	INFO_REALIGN_3_PRIME	chrX	154586219
chrX:154586253	AG AG	A A	1	a0011 a0011	1	NA19086.hp1 NA19086.hp1	frameshift_variant	HIGH	c.373delG c.373delG	p.Glu125fs p.Glu125fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	2/3	447/769	373/543	125/180	INFO_REALIGN_3_PRIME	chrX	154586253
chrX:154586267	T T	TC TC	1	a0002 a0002	1	NA18985.hp1 NA18985.hp1	frameshift_variant	HIGH	c.387dupC c.387dupC	p.Gly130fs p.Gly130fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	2/3	462/769	388/543	130/180	INFO_REALIGN_3_PRIME	chrX	154586267
chrX:154586534	C C	T T	2	a0000 a0003 a0000 a0003	6	HG02486.hp2 HG02622.hp1 HG02647.hp1 others(3): Show HG02486.hp2 HG02622.hp1 HG02647.hp1 HG02818.hp2 HG03195.hp1 HG03225.hp1	missense_variant	MODERATE	c.413C>T c.413C>T	p.Thr138Ile p.Thr138Ile	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	3/3	487/769	413/543	138/180		chrX	154586534
chrX:154586549	G G	A A	1	a0007 a0007	1	HG02698.hp1 HG02698.hp1	missense_variant	MODERATE	c.428G>A c.428G>A	p.Arg143His p.Arg143His	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	3/3	502/769	428/543	143/180		chrX	154586549
chrX:154586563	T T	TC TC	1	a0000 a0000	5	HG02486.hp2 HG02622.hp1 HG02647.hp1 others(2): Show HG02486.hp2 HG02622.hp1 HG02647.hp1 HG02818.hp2 HG03195.hp1	frameshift_variant	HIGH	c.444dupC c.444dupC	p.Ile149fs p.Ile149fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	3/3	519/769	445/543	149/180	INFO_REALIGN_3_PRIME	chrX	154586563
chrX:154586628	G G	GT GT	1	a0009 a0009	1	NA19072.hp1 NA19072.hp1	frameshift_variant	HIGH	c.512dupT c.512dupT	p.Leu171fs p.Leu171fs	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	3/3	587/769	513/543	171/180	INFO_REALIGN_3_PRIME	chrX	154586628
chrX:154586814	C C	T T	1	a0001 a0001	1	HG02886.hp1 HG02886.hp1	splice_region_variant	LOW	c.150C>T c.150C>T		CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	3/3					chrX	154586814

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos
chrX:154586556	G G	C C	1	a0003c0003 a0003c0003	1	HG03225.hp1 HG03225.hp1	synonymous_variant	LOW	c.435G>C c.435G>C	p.Leu145Leu p.Leu145Leu	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	3/3	509/769	435/543	145/180			chrX	154586556

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chrX:154585161	T T	TG TG	1	a0012c0007t0007 a0012c0007t0007	1	NA19076.hp1 NA19076.hp1	5_prime_UTR_variant	MODIFIER	c.-43dupG c.-43dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	42	INFO_REALIGN_3_PRIME	chrX	154585161
chrX:154585187	C C	CG CG	1	a0012c0007t0007 a0012c0007t0007	1	NA19076.hp1 NA19076.hp1	5_prime_UTR_variant	MODIFIER	c.-17dupG c.-17dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	16	INFO_REALIGN_3_PRIME	chrX	154585187
chrX:154585188	G G	A A	1	a0001c0001t0002 a0001c0001t0002	1	HG02109.hp1 HG02109.hp1	5_prime_UTR_variant	MODIFIER	c.-19G>A c.-19G>A	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/3	19		chrX	154585188
chrX:154586686	T T	C C	1	a0001c0001t0003 a0001c0001t0003	1	NA20300.hp2 NA20300.hp2	3_prime_UTR_variant	MODIFIER	c.22T>C c.22T>C	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	3/3	22		chrX	154586686
chrX:154586745	G G	A A	1	a0001c0001t0004 a0001c0001t0004	1	HG01358.hp1 HG01358.hp1	3_prime_UTR_variant	MODIFIER	c.81G>A c.81G>A	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	3/3	81		chrX	154586745
chrX:154586805	A A	G G	1	a0001c0001t0006 a0001c0001t0006	1	HG01496.hp2 HG01496.hp2	3_prime_UTR_variant	MODIFIER	c.141A>G c.141A>G	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	3/3	141		chrX	154586805

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chrX:154585478	ATTCTG ATTCTG	A A	25	a0000c0002t0001g0001 a0001c0001t0001g0001 a0001c0001t0001g0004 others(22): Show a0000c0002t0001g0001 a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0002g0001 a0001c0001t0005g0001 a0001c0001t0006g0001 a0002c0004t0001g0012 a0002c0005t0001g0026 a0003c0003t0001g0013 a0005c0014t0001g0019 a0010c0009t0001g0016 a0011c0008t0001g0024 a0012c0007t0007g0025 a0013c0006t0001g0001	227	HG00099.hp1 HG00140.hp1 HG00280.hp1 others(224): Show HG00099.hp1 HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp1 HG01261.hp1 HG01346.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01981.hp2 HG01993.hp1 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp2 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02148.hp1 HG02155.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02273.hp2 HG02280.hp1 HG02293.hp1 HG02293.hp2 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03516.hp2 HG03540.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03710.hp1 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18612.hp1 NA18747.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18944.hp1 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18952.hp1 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18962.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18974.hp1 NA18975.hp1 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18983.hp1 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp1 NA18990.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18995.hp1 NA18997.hp1 NA18997.hp2 NA19000.hp1 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp2 NA19043.hp1 NA19055.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19076.hp1 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19240.hp1 NA20300.hp1 NA20752.hp1 NA20805.hp1	intron_variant	MODIFIER	c.269+29_269+33delTT others(3): Show c.269+29_269+33delTTCTG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585478
chrX:154585478	ATTCTGTT others(3): Show ATTCTGTTCTG	A A	3	a0001c0001t0001g0003 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0003 a0001c0001t0001g0010 a0001c0001t0001g0011	9	HG01891.hp2 HG02258.hp2 HG02280.hp2 others(6): Show HG01891.hp2 HG02258.hp2 HG02280.hp2 HG02451.hp1 HG02615.hp2 HG02922.hp1 HG02970.hp2 HG02976.hp1 NA19240.hp2	intron_variant	MODIFIER	c.269+24_269+33delTT others(8): Show c.269+24_269+33delTTCTGTTCTG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585478
chrX:154585489	TTCTG TTCTG	T T	1	a0009c0010t0001g0032 a0009c0010t0001g0032	1	NA19072.hp1 NA19072.hp1	intron_variant	MODIFIER	c.269+16_269+19delCT others(2): Show c.269+16_269+19delCTGT	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585489
chrX:154585527	T T	TG TG	1	a0002c0005t0001g0026 a0002c0005t0001g0026	1	NA18985.hp1 NA18985.hp1	intron_variant	MODIFIER	c.269+57dupG c.269+57dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585527
chrX:154585560	TG TG	T T	1	a0002c0004t0001g0012 a0002c0004t0001g0012	1	NA19080.hp2 NA19080.hp2	intron_variant	MODIFIER	c.269+90delG c.269+90delG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585560
chrX:154585573	G G	A A	1	a0003c0003t0001g0013 a0003c0003t0001g0013	1	HG03225.hp1 HG03225.hp1	intron_variant	MODIFIER	c.269+98G>A c.269+98G>A	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2		chrX	154585573
chrX:154585593	G G	GT GT	1	a0012c0007t0007g0025 a0012c0007t0007g0025	1	NA19076.hp1 NA19076.hp1	intron_variant	MODIFIER	c.269+120dupT c.269+120dupT	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585593
chrX:154585599	T T	TG TG	1	a0009c0010t0001g0032 a0009c0010t0001g0032	1	NA19072.hp1 NA19072.hp1	intron_variant	MODIFIER	c.269+129dupG c.269+129dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585599
chrX:154585608	G G	GGC GGC	1	a0002c0005t0001g0026 a0002c0005t0001g0026	1	NA18985.hp1 NA18985.hp1	intron_variant	MODIFIER	c.269+134_269+135ins others(2): Show c.269+134_269+135insCG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585608
chrX:154585616	G G	GT GT	1	a0011c0008t0001g0024 a0011c0008t0001g0024	1	NA19086.hp1 NA19086.hp1	intron_variant	MODIFIER	c.269+143dupT c.269+143dupT	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585616
chrX:154585629	G G	GA GA	1	a0011c0008t0001g0024 a0011c0008t0001g0024	1	NA19086.hp1 NA19086.hp1	intron_variant	MODIFIER	c.269+155dupA c.269+155dupA	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585629
chrX:154585652	AG AG	A A	1	a0001c0001t0001g0014 a0001c0001t0001g0014	1	NA19070.hp1 NA19070.hp1	intron_variant	MODIFIER	c.269+181delG c.269+181delG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585652
chrX:154585670	TG TG	T T	1	a0001c0001t0001g0014 a0001c0001t0001g0014	1	NA19070.hp1 NA19070.hp1	intron_variant	MODIFIER	c.269+198delG c.269+198delG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585670
chrX:154585680	A A	AG AG	2	a0001c0001t0001g0015 a0012c0007t0007g0025 a0001c0001t0001g0015 a0012c0007t0007g0025	2	NA19076.hp1 NA19083.hp1 NA19076.hp1 NA19083.hp1	intron_variant	MODIFIER	c.269+210dupG c.269+210dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585680
chrX:154585686	T T	TG TG	4	a0001c0001t0001g0027 a0001c0001t0001g0028 a0002c0005t0001g0026 others(1): Show a0001c0001t0001g0027 a0001c0001t0001g0028 a0002c0005t0001g0026 a0010c0009t0001g0016	4	HG02738.hp1 NA18961.hp1 NA18985.hp1 others(1): Show HG02738.hp1 NA18961.hp1 NA18985.hp1 NA19058.hp1	intron_variant	MODIFIER	c.269+216dupG c.269+216dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585686
chrX:154585686	T T	TGG TGG	1	a0009c0010t0001g0032 a0009c0010t0001g0032	1	NA19072.hp1 NA19072.hp1	intron_variant	MODIFIER	c.269+215_269+216dup others(2): Show c.269+215_269+216dupGG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585686
chrX:154585692	T T	TG TG	1	a0001c0001t0001g0023 a0001c0001t0001g0023	1	HG03098.hp1 HG03098.hp1	intron_variant	MODIFIER	c.269+222dupG c.269+222dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585692
chrX:154585696	G G	GGA GGA	2	a0009c0010t0001g0032 a0012c0007t0007g0025 a0009c0010t0001g0032 a0012c0007t0007g0025	2	NA19072.hp1 NA19076.hp1 NA19072.hp1 NA19076.hp1	intron_variant	MODIFIER	c.269+225_269+226dup others(2): Show c.269+225_269+226dupAG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585696
chrX:154585700	A A	AG AG	1	a0002c0005t0001g0026 a0002c0005t0001g0026	1	NA18985.hp1 NA18985.hp1	intron_variant	MODIFIER	c.269+229dupG c.269+229dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585700
chrX:154585728	C C	CGGGGTCA others(8): Show CGGGGTCATGCGGGGA	1	a0012c0007t0007g0025 a0012c0007t0007g0025	1	NA19076.hp1 NA19076.hp1	intron_variant	MODIFIER	c.269+256_269+257ins others(15): Show c.269+256_269+257insGTCATGCGGGGAGGG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585728
chrX:154585732	T T	G G	1	a0012c0007t0007g0025 a0012c0007t0007g0025	1	NA19076.hp1 NA19076.hp1	intron_variant	MODIFIER	c.269+257T>G c.269+257T>G	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2		chrX	154585732
chrX:154585737	C C	CG CG	2	a0001c0001t0001g0022 a0010c0009t0001g0016 a0001c0001t0001g0022 a0010c0009t0001g0016	2	HG03688.hp1 NA19058.hp1 HG03688.hp1 NA19058.hp1	intron_variant	MODIFIER	c.269+266dupG c.269+266dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585737
chrX:154585764	A A	AG AG	1	a0011c0008t0001g0024 a0011c0008t0001g0024	1	NA19086.hp1 NA19086.hp1	intron_variant	MODIFIER	c.269+294dupG c.269+294dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585764
chrX:154585797	T T	TG TG	4	a0001c0001t0001g0014 a0001c0001t0001g0021 a0001c0001t0001g0023 others(1): Show a0001c0001t0001g0014 a0001c0001t0001g0021 a0001c0001t0001g0023 a0011c0008t0001g0024	4	HG03098.hp1 NA19070.hp1 NA19086.hp1 others(1): Show HG03098.hp1 NA19070.hp1 NA19086.hp1 NA19090.hp2	intron_variant	MODIFIER	c.269+328dupG c.269+328dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585797
chrX:154585803	G G	GGA GGA	1	a0002c0005t0001g0026 a0002c0005t0001g0026	1	NA18985.hp1 NA18985.hp1	intron_variant	MODIFIER	c.269+328_269+329ins others(2): Show c.269+328_269+329insGA	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2		chrX	154585803
chrX:154585805	A A	G G	1	a0002c0005t0001g0026 a0002c0005t0001g0026	1	NA18985.hp1 NA18985.hp1	intron_variant	MODIFIER	c.269+330A>G c.269+330A>G	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2		chrX	154585805
chrX:154585822	C C	CG CG	7	a0001c0001t0001g0004 a0001c0001t0001g0010 a0001c0001t0001g0014 others(4): Show a0001c0001t0001g0004 a0001c0001t0001g0010 a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0027 a0001c0001t0001g0029 a0004c0015t0001g0030	12	HG00741.hp2 HG02135.hp1 HG02615.hp2 others(9): Show HG00741.hp2 HG02135.hp1 HG02615.hp2 HG02809.hp2 HG03239.hp1 NA18961.hp1 NA18975.hp2 NA19005.hp1 NA19006.hp1 NA19030.hp1 NA19070.hp1 NA19090.hp1	intron_variant	MODIFIER	c.270-327dupG c.270-327dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585822
chrX:154585823	G G	A A	1	a0001c0001t0001g0007 a0001c0001t0001g0007	2	HG00423.hp1 HG00609.hp1 HG00423.hp1 HG00609.hp1	intron_variant	MODIFIER	c.270-329G>A c.270-329G>A	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2		chrX	154585823
chrX:154585824	G G	GT GT	1	a0002c0005t0001g0026 a0002c0005t0001g0026	1	NA18985.hp1 NA18985.hp1	intron_variant	MODIFIER	c.270-328_270-327ins others(1): Show c.270-328_270-327insT	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2		chrX	154585824
chrX:154585865	A A	AG AG	4	a0001c0001t0001g0015 a0001c0001t0001g0020 a0001c0001t0001g0031 others(1): Show a0001c0001t0001g0015 a0001c0001t0001g0020 a0001c0001t0001g0031 a0005c0014t0001g0019	4	HG02055.hp1 HG03927.hp1 NA18997.hp1 others(1): Show HG02055.hp1 HG03927.hp1 NA18997.hp1 NA19083.hp1	intron_variant	MODIFIER	c.270-282dupG c.270-282dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585865
chrX:154585872	C C	A A	1	a0001c0001t0001g0008 a0001c0001t0001g0008	2	HG03041.hp1 HG03139.hp1 HG03041.hp1 HG03139.hp1	intron_variant	MODIFIER	c.270-280C>A c.270-280C>A	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2		chrX	154585872
chrX:154585948	GA GA	G G	1	a0011c0008t0001g0024 a0011c0008t0001g0024	1	NA19086.hp1 NA19086.hp1	intron_variant	MODIFIER	c.270-201delA c.270-201delA	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585948
chrX:154585974	T T	TG TG	1	a0002c0005t0001g0026 a0002c0005t0001g0026	1	NA18985.hp1 NA18985.hp1	intron_variant	MODIFIER	c.270-174dupG c.270-174dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154585974
chrX:154585978	G G	T T	1	a0001c0001t0001g0005 a0001c0001t0001g0005	5	HG00735.hp2 HG01123.hp2 HG01346.hp2 others(2): Show HG00735.hp2 HG01123.hp2 HG01346.hp2 HG02148.hp2 HG02273.hp1	intron_variant	MODIFIER	c.270-174G>T c.270-174G>T	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2		chrX	154585978
chrX:154586010	C C	CT CT	1	a0001c0001t0001g0014 a0001c0001t0001g0014	1	NA19070.hp1 NA19070.hp1	intron_variant	MODIFIER	c.270-142_270-141ins others(1): Show c.270-142_270-141insT	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2		chrX	154586010
chrX:154586014	G G	C C	1	a0003c0003t0001g0013 a0003c0003t0001g0013	1	HG03225.hp1 HG03225.hp1	intron_variant	MODIFIER	c.270-138G>C c.270-138G>C	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2		chrX	154586014
chrX:154586040	T T	TTAG TTAG	1	a0002c0005t0001g0026 a0002c0005t0001g0026	1	NA18985.hp1 NA18985.hp1	intron_variant	MODIFIER	c.270-112_270-111ins others(3): Show c.270-112_270-111insTAG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2		chrX	154586040
chrX:154586041	A A	AG AG	3	a0001c0001t0001g0011 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0011 a0001c0001t0001g0018 a0001c0001t0001g0020	3	HG02056.hp1 HG02258.hp2 NA18997.hp1 HG02056.hp1 HG02258.hp2 NA18997.hp1	intron_variant	MODIFIER	c.270-105dupG c.270-105dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154586041
chrX:154586041	A A	G G	1	a0002c0005t0001g0026 a0002c0005t0001g0026	1	NA18985.hp1 NA18985.hp1	intron_variant	MODIFIER	c.270-111A>G c.270-111A>G	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2		chrX	154586041
chrX:154586053	T T	TG TG	5	a0001c0001t0001g0009 a0001c0001t0001g0017 a0005c0014t0001g0019 others(2): Show a0001c0001t0001g0009 a0001c0001t0001g0017 a0005c0014t0001g0019 a0009c0010t0001g0032 a0011c0008t0001g0024	6	HG02293.hp1 HG03927.hp1 NA18989.hp1 others(3): Show HG02293.hp1 HG03927.hp1 NA18989.hp1 NA19006.hp1 NA19072.hp1 NA19086.hp1	intron_variant	MODIFIER	c.270-94dupG c.270-94dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154586053
chrX:154586061	T T	TCG TCG	1	a0001c0001t0001g0014 a0001c0001t0001g0014	1	NA19070.hp1 NA19070.hp1	intron_variant	MODIFIER	c.270-91_270-90insCG c.270-91_270-90insCG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2		chrX	154586061
chrX:154586061	T T	TG TG	3	a0002c0005t0001g0026 a0005c0014t0001g0019 a0009c0010t0001g0032 a0002c0005t0001g0026 a0005c0014t0001g0019 a0009c0010t0001g0032	3	HG03927.hp1 NA18985.hp1 NA19072.hp1 HG03927.hp1 NA18985.hp1 NA19072.hp1	intron_variant	MODIFIER	c.270-86dupG c.270-86dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154586061
chrX:154586067	A A	AG AG	2	a0001c0001t0001g0015 a0004c0015t0001g0030 a0001c0001t0001g0015 a0004c0015t0001g0030	2	NA18975.hp2 NA19083.hp1 NA18975.hp2 NA19083.hp1	intron_variant	MODIFIER	c.270-80dupG c.270-80dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154586067
chrX:154586110	G G	GC GC	1	a0002c0005t0001g0026 a0002c0005t0001g0026	1	NA18985.hp1 NA18985.hp1	intron_variant	MODIFIER	c.270-40dupC c.270-40dupC	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154586110
chrX:154586141	G G	GC GC	2	a0002c0005t0001g0026 a0011c0008t0001g0024 a0002c0005t0001g0026 a0011c0008t0001g0024	2	NA18985.hp1 NA19086.hp1 NA18985.hp1 NA19086.hp1	splice_region_variant&intron_variant	LOW	c.270-6dupC c.270-6dupC	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	1/2	INFO_REALIGN_3_PRIME	chrX	154586141
chrX:154586329	C C	CG CG	1	a0001c0001t0001g0017 a0001c0001t0001g0017	1	NA19006.hp1 NA19006.hp1	intron_variant	MODIFIER	c.404+45dupG c.404+45dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	2/2	INFO_REALIGN_3_PRIME	chrX	154586329
chrX:154586348	T T	TG TG	1	a0004c0015t0001g0030 a0004c0015t0001g0030	1	NA18975.hp2 NA18975.hp2	intron_variant	MODIFIER	c.404+67dupG c.404+67dupG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	2/2	INFO_REALIGN_3_PRIME	chrX	154586348
chrX:154586355	TG TG	T T	1	a0011c0008t0001g0024 a0011c0008t0001g0024	1	NA19086.hp1 NA19086.hp1	intron_variant	MODIFIER	c.404+72delG c.404+72delG	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	2/2	INFO_REALIGN_3_PRIME	chrX	154586355
chrX:154586363	G G	A A	1	a0001c0001t0001g0006 a0001c0001t0001g0006	3	HG01891.hp1 HG02109.hp2 HG02965.hp1 HG01891.hp1 HG02109.hp2 HG02965.hp1	intron_variant	MODIFIER	c.404+77G>A c.404+77G>A	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	2/2		chrX	154586363
chrX:154586402	AC AC	A A	1	a0001c0001t0001g0014 a0001c0001t0001g0014	1	NA19070.hp1 NA19070.hp1	intron_variant	MODIFIER	c.404+120delC c.404+120delC	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	2/2	INFO_REALIGN_3_PRIME	chrX	154586402
chrX:154586498	C C	T T	1	a0003c0003t0001g0013 a0003c0003t0001g0013	1	HG03225.hp1 HG03225.hp1	intron_variant	MODIFIER	c.405-28C>T c.405-28C>T	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	2/2		chrX	154586498
chrX:154586501	G G	A A	1	a0003c0003t0001g0013 a0003c0003t0001g0013	1	HG03225.hp1 HG03225.hp1	intron_variant	MODIFIER	c.405-25G>A c.405-25G>A	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	2/2		chrX	154586501
chrX:154586509	C C	T T	1	a0003c0003t0001g0013 a0003c0003t0001g0013	1	HG03225.hp1 HG03225.hp1	intron_variant	MODIFIER	c.405-17C>T c.405-17C>T	CTAG1A	ENSG00000268651.4	transcript	ENST00000599837.3	protein_coding	2/2		chrX	154586509

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🧬 JoGo Online Haplotype Explorer CTAG1A_chrX_154580133_154591816

JoGo Local Haplotype Explorer (on iGV) CTAG1A_chrX_154580133_154591816

Translation Multiple Alignment View

ACTG-Haplotype Mutation Positions 3D Viewer

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 14)

CCoding Level Haplotype Info (Total: 15)

TTranscript Level Haplotype Info (Total: 7)

GGenebody Level Haplotype Info (Total: 32)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 15)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 20)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 42)

Haplotype Details by Sample (Haploid Level) (Total: 293)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 29)

CCoding Level Variants (Synonymous Mutations) (Total: 1)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 6)

GGenebody Level Haplotype Variants (Intron) (Total: 53)

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Annotation (Repeats)

Annotation (SNP Array)