JoGo: Joint Open Genome and Omics Platform

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geneid	1506
ensemblid	ENSG00000141086.18
hgncid	2524
symbol	CTRL
name	chymotrypsin like
refseq_nuc	NM_001907.3
refseq_prot	NP_001898.1
ensembl_nuc	ENST00000574481.6
ensembl_prot	ENSP00000458537.2
mane_status	MANE Select
chr	chr16
start	67929574
end	67931862
strand	-
ver	v1.2
region	chr16:67929574-67931862
region5000	chr16:67924574-67936862
regionname0	CTRL_chr16_67929574_67931862
regionname5000	CTRL_chr16_67924574_67936862

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/1	264	189	34	45	85	2	21	64	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0002	0/0	264	98	43	21	23	2	9	19	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0003	0/0	264	13	13	0	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0004	0/0	264	3	3	0	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0005	0/0	264	3	0	0	3	0	0	2	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0006	0/0	264	3	3	0	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0007	0/0	264	1	1	0	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0008	0/0	264	1	1	0	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0009	0/0	264	1	0	0	1	0	0	1	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/1	795	187	34	43	85	2	21	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
c0002	0/0	795	96	41	21	23	2	9	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
c0003	0/0	795	13	13	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
c0004	0/0	795	3	3	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
c0005	0/0	795	3	3	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
c0006	0/0	795	3	0	0	3	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
c0007	0/0	795	2	2	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
c0008	0/0	795	1	0	1	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
c0009	0/0	795	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
c0010	0/0	795	1	0	0	1	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
c0011	0/0	795	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
c0012	0/0	795	1	0	1	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	371	309	97	66	111	4	29	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
t0002	0/0	371	1	0	0	0	0	1	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
t0003	0/0	371	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
t0004	0/0	371	1	0	0	1	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	1/1	166	25	38	81	2	18	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0002	0/0	78	26	20	22	2	8	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0003	0/0	12	12	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0004	0/0	8	8	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0005	0/0	4	4	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0006	0/0	4	1	3	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0007	0/0	3	3	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0008	0/0	3	3	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0009	0/0	3	0	0	3	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0010	0/0	3	3	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0011	0/0	2	0	0	2	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0012	0/0	2	2	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0013	0/0	2	1	1	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0014	0/0	2	2	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0015	0/0	2	0	0	0	0	2	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0016	0/0	1	0	1	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0017	0/0	1	0	0	1	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0018	0/0	1	0	0	1	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0019	0/0	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0020	0/0	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0021	0/0	1	0	0	0	0	1	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0022	0/0	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0023	0/0	1	0	0	0	0	1	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0024	0/0	1	0	0	1	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0025	0/0	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0026	0/0	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0027	0/0	1	0	1	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0028	0/0	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0029	0/0	1	0	0	1	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0030	0/0	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0031	0/0	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0032	0/0	1	0	1	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
g0033	0/0	1	0	1	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/1	795	187	34	43	85	2	21	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0001c0008	0/0	795	1	0	1	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0001c0012	0/0	795	1	0	1	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0002c0002	0/0	795	96	41	21	23	2	9	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0002c0007	0/0	795	2	2	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0003c0003	0/0	795	13	13	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0004c0005	0/0	795	3	3	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0005c0006	0/0	795	3	0	0	3	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0006c0004	0/0	795	3	3	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0007c0011	0/0	795	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0008c0009	0/0	795	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0009c0010	0/0	795	1	0	0	1	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/1	1165	185	34	43	84	2	20	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0001c0001t0002	0/0	1165	1	0	0	0	0	1	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0001c0001t0004	0/0	1165	1	0	0	1	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0001c0008t0001	0/0	1165	1	0	1	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0001c0012t0001	0/0	1165	1	0	1	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0002c0002t0001	0/0	1165	95	40	21	23	2	9	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0002c0002t0003	0/0	1165	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0002c0007t0001	0/0	1165	2	2	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0003c0003t0001	0/0	1165	13	13	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0004c0005t0001	0/0	1165	3	3	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0005c0006t0001	0/0	1165	3	0	0	3	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0006c0004t0001	0/0	1165	3	3	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0007c0011t0001	0/0	1165	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0008c0009t0001	0/0	1165	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862
a0009c0010t0001	0/0	1165	1	0	0	1	0	0	CTRL_chr16_67924574_67936862	CTRL	copy fasta	chr16	67924574	67936862

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	1/1	166	25	38	81	2	18	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0001c0001t0001g0006	0/0	4	1	3	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0001c0001t0001g0010	0/0	3	3	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0001c0001t0001g0011	0/0	2	0	0	2	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0001c0001t0001g0012	0/0	2	2	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0001c0001t0001g0015	0/0	2	0	0	0	0	2	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0001c0001t0001g0017	0/0	1	0	0	1	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0001c0001t0001g0019	0/0	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0001c0001t0001g0026	0/0	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0001c0001t0001g0027	0/0	1	0	1	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0001c0001t0001g0031	0/0	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0001c0001t0001g0032	0/0	1	0	1	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0001c0001t0002g0023	0/0	1	0	0	0	0	1	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0001c0001t0004g0024	0/0	1	0	0	1	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0001c0008t0001g0016	0/0	1	0	1	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0001c0012t0001g0033	0/0	1	0	1	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0002c0002t0001g0002	0/0	78	26	20	22	2	8	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0002c0002t0001g0004	0/0	8	8	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0002c0002t0001g0005	0/0	4	4	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0002c0002t0001g0013	0/0	2	1	1	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0002c0002t0001g0018	0/0	1	0	0	1	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0002c0002t0001g0021	0/0	1	0	0	0	0	1	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0002c0002t0001g0028	0/0	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0002c0002t0003g0025	0/0	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0002c0007t0001g0014	0/0	2	2	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0003c0003t0001g0003	0/0	12	12	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0003c0003t0001g0022	0/0	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0004c0005t0001g0008	0/0	3	3	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0005c0006t0001g0009	0/0	3	0	0	3	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0006c0004t0001g0007	0/0	3	3	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0007c0011t0001g0030	0/0	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0008c0009t0001g0020	0/0	1	1	0	0	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
a0009c0010t0001g0029	0/0	1	0	0	1	0	0	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00438	hp1	a0002	c0002	t0001	g0002	EAS	CHS	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG00438	hp2	a0001	c0001	t0001	g0001	EAS	CHS	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG00558	hp1	a0005	c0006	t0001	g0009	EAS	CHS	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG00558	hp2	a0001	c0001	t0001	g0001	EAS	CHS	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG00597	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG00597	hp2	a0001	c0001	t0001	g0001	EAS	CHS	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG00639	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG00639	hp2	a0002	c0002	t0001	g0002	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG00673	hp1	a0001	c0001	t0001	g0001	EAS	CHS	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG00673	hp2	a0001	c0001	t0001	g0001	EAS	CHS	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG00735	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG00738	hp1	a0002	c0002	t0001	g0002	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG00738	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG00741	hp1	a0002	c0002	t0001	g0002	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG00741	hp2	a0002	c0002	t0001	g0002	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01069	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01069	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01070	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01070	hp2	a0002	c0002	t0001	g0002	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01071	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01071	hp2	a0002	c0002	t0001	g0002	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01074	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01081	hp1	a0001	c0001	t0001	g0032	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01099	hp1	a0002	c0002	t0001	g0002	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01099	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01106	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01106	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01109	hp1	a0002	c0002	t0001	g0002	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01109	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01167	hp1	a0002	c0002	t0001	g0002	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01167	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01169	hp1	a0002	c0002	t0001	g0002	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01169	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01175	hp1	a0002	c0002	t0001	g0002	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01175	hp2	a0001	c0001	t0001	g0001	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01192	hp1	a0001	c0001	t0001	g0001	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01192	hp2	a0002	c0002	t0001	g0002	AMR	PUR	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01255	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01255	hp2	a0002	c0002	t0001	g0002	AMR	CLM	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01256	hp1	a0002	c0002	t0001	g0002	AMR	CLM	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01256	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01258	hp1	a0002	c0002	t0001	g0002	AMR	CLM	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01258	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01261	hp1	a0002	c0002	t0001	g0002	AMR	CLM	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01261	hp2	a0002	c0002	t0001	g0002	AMR	CLM	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01346	hp1	a0002	c0002	t0001	g0002	AMR	CLM	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01346	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01358	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01358	hp2	a0001	c0001	t0001	g0006	AMR	CLM	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01433	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01433	hp2	a0002	c0002	t0001	g0013	AMR	CLM	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01496	hp1	a0001	c0001	t0001	g0006	AMR	CLM	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01496	hp2	a0001	c0001	t0001	g0001	AMR	CLM	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01884	hp1	a0001	c0001	t0001	g0010	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01884	hp2	a0002	c0002	t0001	g0002	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01891	hp1	a0003	c0003	t0001	g0003	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01891	hp2	a0002	c0002	t0001	g0002	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01934	hp1	a0002	c0002	t0001	g0002	AMR	PEL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01934	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01943	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01943	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01952	hp1	a0001	c0001	t0001	g0006	AMR	PEL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01952	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01975	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01975	hp2	a0002	c0002	t0001	g0002	AMR	PEL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01978	hp1	a0001	c0012	t0001	g0033	AMR	PEL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01978	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01993	hp1	a0001	c0001	t0001	g0027	AMR	PEL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01993	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02004	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02004	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02015	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02015	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02027	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02027	hp2	a0002	c0002	t0001	g0002	EAS	KHV	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02040	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02040	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02055	hp1	a0002	c0002	t0001	g0002	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02055	hp2	a0003	c0003	t0001	g0003	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02071	hp1	a0002	c0002	t0001	g0002	EAS	KHV	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02071	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02132	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02132	hp2	a0002	c0002	t0001	g0002	EAS	KHV	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02135	hp1	a0001	c0001	t0001	g0001	EAS	KHV	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02135	hp2	a0001	c0001	t0001	g0001	EAS	KHV	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02145	hp1	a0002	c0002	t0001	g0002	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02145	hp2	a0001	c0001	t0001	g0001	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02165	hp1	a0001	c0001	t0001	g0001	EAS	CDX	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02165	hp2	a0001	c0001	t0001	g0001	EAS	CDX	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02257	hp1	a0001	c0001	t0001	g0010	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02257	hp2	a0001	c0001	t0001	g0001	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02258	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02258	hp2	a0001	c0001	t0001	g0001	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02280	hp1	a0001	c0001	t0001	g0012	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02280	hp2	a0001	c0001	t0001	g0001	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02300	hp1	a0001	c0001	t0001	g0001	AMR	PEL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02300	hp2	a0001	c0001	t0001	g0001	AMR	PEL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02451	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02451	hp2	a0002	c0002	t0001	g0002	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02572	hp1	a0002	c0002	t0001	g0005	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02572	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02602	hp1	a0002	c0002	t0001	g0002	SAS	PJL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02602	hp2	a0001	c0001	t0002	g0023	SAS	PJL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02615	hp1	a0003	c0003	t0001	g0003	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02615	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02622	hp1	a0006	c0004	t0001	g0007	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02622	hp2	a0002	c0002	t0001	g0004	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02630	hp1	a0002	c0002	t0001	g0002	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02630	hp2	a0003	c0003	t0001	g0003	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02647	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02647	hp2	a0002	c0002	t0001	g0002	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02717	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02717	hp2	a0002	c0002	t0001	g0005	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02723	hp1	a0006	c0004	t0001	g0007	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02723	hp2	a0001	c0001	t0001	g0001	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02735	hp1	a0002	c0002	t0001	g0002	SAS	PJL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02735	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02809	hp1	a0003	c0003	t0001	g0022	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02809	hp2	a0002	c0002	t0001	g0002	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02818	hp1	a0001	c0001	t0001	g0001	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02818	hp2	a0002	c0002	t0001	g0002	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02886	hp1	a0003	c0003	t0001	g0003	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02886	hp2	a0002	c0002	t0001	g0005	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02895	hp1	a0002	c0002	t0001	g0002	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02895	hp2	a0003	c0003	t0001	g0003	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02896	hp1	a0002	c0002	t0001	g0004	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02896	hp2	a0002	c0002	t0001	g0002	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02897	hp1	a0003	c0003	t0001	g0003	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02897	hp2	a0002	c0002	t0001	g0002	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02922	hp1	a0001	c0001	t0001	g0026	AFR	ESN	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02922	hp2	a0002	c0007	t0001	g0014	AFR	ESN	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02970	hp1	a0004	c0005	t0001	g0008	AFR	ESN	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02970	hp2	a0004	c0005	t0001	g0008	AFR	ESN	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02976	hp1	a0002	c0002	t0001	g0005	AFR	ESN	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02976	hp2	a0001	c0001	t0001	g0001	AFR	ESN	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03041	hp1	a0003	c0003	t0001	g0003	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03041	hp2	a0002	c0002	t0001	g0002	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03098	hp1	a0002	c0002	t0001	g0002	AFR	MSL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03098	hp2	a0002	c0002	t0001	g0013	AFR	MSL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03130	hp1	a0001	c0001	t0001	g0012	AFR	ESN	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03130	hp2	a0001	c0001	t0001	g0001	AFR	ESN	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03139	hp1	a0002	c0002	t0001	g0002	AFR	ESN	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03139	hp2	a0001	c0001	t0001	g0001	AFR	ESN	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03195	hp1	a0001	c0001	t0001	g0001	AFR	ESN	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03195	hp2	a0002	c0002	t0001	g0004	AFR	ESN	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03209	hp1	a0003	c0003	t0001	g0003	AFR	MSL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03209	hp2	a0002	c0002	t0001	g0002	AFR	MSL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03225	hp1	a0002	c0002	t0001	g0004	AFR	MSL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03225	hp2	a0002	c0002	t0001	g0002	AFR	MSL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03239	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03239	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03453	hp1	a0001	c0001	t0001	g0001	AFR	MSL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03453	hp2	a0003	c0003	t0001	g0003	AFR	MSL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03486	hp1	a0002	c0002	t0001	g0004	AFR	MSL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03486	hp2	a0002	c0002	t0001	g0002	AFR	MSL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03491	hp1	a0001	c0001	t0001	g0001	SAS	PJL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03491	hp2	a0002	c0002	t0001	g0021	SAS	PJL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03516	hp1	a0002	c0002	t0001	g0002	AFR	ESN	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03516	hp2	a0002	c0002	t0001	g0002	AFR	ESN	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03540	hp1	a0002	c0002	t0001	g0004	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03540	hp2	a0007	c0011	t0001	g0030	AFR	GWD	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03579	hp1	a0003	c0003	t0001	g0003	AFR	MSL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03579	hp2	a0001	c0001	t0001	g0001	AFR	MSL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03654	hp1	a0002	c0002	t0001	g0002	SAS	PJL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03654	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03688	hp1	a0002	c0002	t0001	g0002	SAS	STU	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03688	hp2	a0002	c0002	t0001	g0002	SAS	STU	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03704	hp1	a0001	c0001	t0001	g0015	SAS	PJL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03704	hp2	a0001	c0001	t0001	g0001	SAS	PJL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03831	hp1	a0001	c0001	t0001	g0001	SAS	BEB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03831	hp2	a0001	c0001	t0001	g0001	SAS	BEB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03942	hp1	a0001	c0001	t0001	g0001	SAS	BEB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03942	hp2	a0001	c0001	t0001	g0015	SAS	BEB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG04115	hp1	a0001	c0001	t0001	g0001	SAS	STU	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG04115	hp2	a0002	c0002	t0001	g0002	SAS	STU	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG04184	hp1	a0001	c0001	t0001	g0001	SAS	BEB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG04184	hp2	a0001	c0001	t0001	g0001	SAS	BEB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG04199	hp1	a0002	c0002	t0001	g0002	SAS	STU	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG04199	hp2	a0001	c0001	t0001	g0001	SAS	STU	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG04204	hp1	a0001	c0001	t0001	g0001	SAS	STU	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG04204	hp2	a0002	c0002	t0001	g0002	SAS	STU	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG04228	hp1	a0001	c0001	t0001	g0001	SAS	STU	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG04228	hp2	a0001	c0001	t0001	g0001	SAS	STU	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18522	hp1	a0002	c0002	t0001	g0004	AFR	YRI	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18522	hp2	a0002	c0002	t0001	g0002	AFR	YRI	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18612	hp1	a0001	c0001	t0001	g0001	EAS	CHB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18612	hp2	a0001	c0001	t0001	g0001	EAS	CHB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18747	hp2	a0001	c0001	t0001	g0001	EAS	CHB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18906	hp1	a0001	c0001	t0001	g0001	AFR	YRI	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18906	hp2	a0002	c0002	t0001	g0002	AFR	YRI	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18940	hp1	a0002	c0002	t0001	g0002	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18940	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18941	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18941	hp2	a0002	c0002	t0001	g0002	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18943	hp1	a0009	c0010	t0001	g0029	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18943	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18947	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18947	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18948	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18948	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18951	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18952	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18952	hp2	a0002	c0002	t0001	g0002	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18954	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18954	hp2	a0005	c0006	t0001	g0009	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18956	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18956	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18957	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18957	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18960	hp1	a0001	c0001	t0001	g0011	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18960	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18964	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18964	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18969	hp1	a0001	c0001	t0004	g0024	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18969	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18973	hp1	a0002	c0002	t0001	g0002	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18975	hp1	a0002	c0002	t0001	g0002	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18975	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18979	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18979	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18984	hp1	a0001	c0001	t0001	g0011	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18984	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18986	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18986	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18994	hp1	a0002	c0002	t0001	g0002	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18994	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18995	hp1	a0002	c0002	t0001	g0002	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18995	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18998	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18998	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18999	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18999	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19000	hp2	a0002	c0002	t0001	g0002	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19003	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19003	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19005	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19005	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19007	hp1	a0005	c0006	t0001	g0009	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19007	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19010	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19010	hp2	a0002	c0002	t0001	g0002	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19011	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19012	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19012	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19030	hp1	a0001	c0001	t0001	g0010	AFR	LWK	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19030	hp2	a0001	c0001	t0001	g0019	AFR	LWK	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19043	hp1	a0001	c0001	t0001	g0001	AFR	LWK	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19043	hp2	a0002	c0002	t0001	g0002	AFR	LWK	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19055	hp1	a0002	c0002	t0001	g0002	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19055	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19057	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19057	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19060	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19060	hp2	a0002	c0002	t0001	g0002	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19064	hp1	a0002	c0002	t0001	g0002	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19064	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19074	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19075	hp1	a0002	c0002	t0001	g0018	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19075	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19078	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19078	hp2	a0002	c0002	t0001	g0002	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19081	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19081	hp2	a0002	c0002	t0001	g0002	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19084	hp1	a0002	c0002	t0001	g0002	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19084	hp2	a0002	c0002	t0001	g0002	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19087	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19087	hp2	a0001	c0001	t0001	g0017	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19088	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19088	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19089	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19089	hp2	a0002	c0002	t0001	g0002	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19090	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19090	hp2	a0002	c0002	t0001	g0002	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19240	hp1	a0008	c0009	t0001	g0020	AFR	YRI	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA19240	hp2	a0002	c0002	t0001	g0028	AFR	YRI	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA20129	hp1	a0002	c0002	t0001	g0002	AFR	ASW	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA20129	hp2	a0001	c0001	t0001	g0001	AFR	ASW	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA20752	hp1	a0001	c0001	t0001	g0001	EUR	TSI	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA20752	hp2	a0002	c0002	t0001	g0002	EUR	TSI	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA20805	hp1	a0001	c0001	t0001	g0001	EUR	TSI	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA20805	hp2	a0002	c0002	t0001	g0002	EUR	TSI	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA20905	hp1	a0001	c0001	t0001	g0001	SAS	GIH	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA20905	hp2	a0001	c0001	t0001	g0001	SAS	GIH	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01123	hp1	a0001	c0001	t0001	g0001	AMR	CLM	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG01123	hp2	a0001	c0008	t0001	g0016	AMR	CLM	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02109	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02109	hp2	a0003	c0003	t0001	g0003	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02486	hp1	a0001	c0001	t0001	g0001	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02486	hp2	a0001	c0001	t0001	g0031	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02559	hp1	a0004	c0005	t0001	g0008	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG02559	hp2	a0002	c0007	t0001	g0014	AFR	ACB	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03471	hp1	a0002	c0002	t0001	g0002	AFR	MSL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG03471	hp2	a0001	c0001	t0001	g0001	AFR	MSL	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG06807	hp1	a0002	c0002	t0003	g0025	AFR	USA	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
HG06807	hp2	a0002	c0002	t0001	g0004	AFR	USA	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18955	hp1	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA18955	hp2	a0001	c0001	t0001	g0001	EAS	JPT	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA20300	hp1	a0002	c0002	t0001	g0002	AFR	USA	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA20300	hp2	a0006	c0004	t0001	g0007	AFR	USA	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA21309	hp1	a0001	c0001	t0001	g0001	AFR	LWK	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
NA21309	hp2	a0001	c0001	t0001	g0006	AFR	LWK	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
homoSapiens_chm13v2	hp1	a0001	c0001	t0001	g0001	REF	REF	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0001	REF	REF	CTRL_chr16_67924574_67936862	CTRL	chr16	67924574	67936862

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr16:67930022	G G	A A	1	a0004 a0004	3	HG02559.hp1 HG02970.hp1 HG02970.hp2 HG02559.hp1 HG02970.hp1 HG02970.hp2	missense_variant	MODERATE	c.707C>T c.707C>T	p.Thr236Ile p.Thr236Ile	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	7/7	717/1165	707/795	236/264	chr16	67930022
chr16:67930300	T T	C C	2	a0002 a0007 a0002 a0007	99	HG00438.hp1 HG00639.hp2 HG00738.hp1 others(96): Show HG00438.hp1 HG00639.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01070.hp2 HG01071.hp2 HG01099.hp1 HG01109.hp1 HG01167.hp1 HG01169.hp1 HG01175.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01433.hp2 HG01884.hp2 HG01891.hp2 HG01934.hp1 HG01975.hp2 HG02027.hp2 HG02055.hp1 HG02071.hp1 HG02132.hp2 HG02145.hp1 HG02451.hp2 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02622.hp2 HG02630.hp1 HG02647.hp2 HG02717.hp2 HG02735.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp2 HG02976.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03491.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp1 HG03688.hp1 HG03688.hp2 HG04115.hp2 HG04199.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18940.hp1 NA18941.hp2 NA18952.hp2 NA18973.hp1 NA18975.hp1 NA18994.hp1 NA18995.hp1 NA19000.hp2 NA19010.hp2 NA19043.hp2 NA19055.hp1 NA19060.hp2 NA19064.hp1 NA19075.hp1 NA19078.hp2 NA19081.hp2 NA19084.hp1 NA19084.hp2 NA19089.hp2 NA19090.hp2 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20752.hp2 NA20805.hp2	missense_variant	MODERATE	c.518A>G c.518A>G	p.His173Arg p.His173Arg	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	6/7	528/1165	518/795	173/264	chr16	67930300
chr16:67930458	G G	A A	3	a0003 a0006 a0008 a0003 a0006 a0008	17	HG01891.hp1 HG02055.hp2 HG02109.hp2 others(14): Show HG01891.hp1 HG02055.hp2 HG02109.hp2 HG02615.hp1 HG02622.hp1 HG02630.hp2 HG02723.hp1 HG02809.hp1 HG02886.hp1 HG02895.hp2 HG02897.hp1 HG03041.hp1 HG03209.hp1 HG03453.hp2 HG03579.hp1 NA19240.hp1 NA20300.hp2	missense_variant	MODERATE	c.449C>T c.449C>T	p.Thr150Ile p.Thr150Ile	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	5/7	459/1165	449/795	150/264	chr16	67930458
chr16:67930933	G G	A A	1	a0005 a0005	3	HG00558.hp1 NA18954.hp2 NA19007.hp1 HG00558.hp1 NA18954.hp2 NA19007.hp1	missense_variant	MODERATE	c.223C>T c.223C>T	p.His75Tyr p.His75Tyr	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	3/7	233/1165	223/795	75/264	chr16	67930933
chr16:67931099	T T	C C	1	a0009 a0009	1	NA18943.hp1 NA18943.hp1	missense_variant&splice_region_variant	MODERATE	c.155A>G c.155A>G	p.Gln52Arg p.Gln52Arg	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	2/7	165/1165	155/795	52/264	chr16	67931099
chr16:67931110	C C	G G	1	a0008 a0008	1	NA19240.hp1 NA19240.hp1	missense_variant	MODERATE	c.144G>C c.144G>C	p.Gln48His p.Gln48His	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	2/7	154/1165	144/795	48/264	chr16	67931110
chr16:67931184	T T	A A	1	a0007 a0007	1	HG03540.hp2 HG03540.hp2	missense_variant	MODERATE	c.70A>T c.70A>T	p.Ile24Phe p.Ile24Phe	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	2/7	80/1165	70/795	24/264	chr16	67931184
chr16:67931196	C C	T T	1	a0006 a0006	3	HG02622.hp1 HG02723.hp1 NA20300.hp2 HG02622.hp1 HG02723.hp1 NA20300.hp2	missense_variant	MODERATE	c.58G>A c.58G>A	p.Gly20Ser p.Gly20Ser	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	2/7	68/1165	58/795	20/264	chr16	67931196

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr16:67930946	C C	A A	1	a0002c0007 a0002c0007	2	HG02559.hp2 HG02922.hp2 HG02559.hp2 HG02922.hp2	synonymous_variant	LOW	c.210G>T c.210G>T	p.Val70Val p.Val70Val	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	3/7	220/1165	210/795	70/264	chr16	67930946
chr16:67931814	G G	A A	1	a0001c0012 a0001c0012	1	HG01978.hp1 HG01978.hp1	synonymous_variant	LOW	c.39C>T c.39C>T	p.Leu13Leu p.Leu13Leu	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	1/7	49/1165	39/795	13/264	chr16	67931814
chr16:67931849	A A	G G	1	a0001c0008 a0001c0008	1	HG01123.hp2 HG01123.hp2	synonymous_variant	LOW	c.4T>C c.4T>C	p.Leu2Leu p.Leu2Leu	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	1/7	14/1165	4/795	2/264	chr16	67931849

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	chr	pos
chr16:67929623	C C	T T	1	a0001c0001t0004 a0001c0001t0004	1	NA18969.hp1 NA18969.hp1	3_prime_UTR_variant	MODIFIER	c.311G>A c.311G>A	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	7/7	311	chr16	67929623
chr16:67929633	A A	G G	1	a0002c0002t0003 a0002c0002t0003	1	HG06807.hp1 HG06807.hp1	3_prime_UTR_variant	MODIFIER	c.301T>C c.301T>C	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	7/7	301	chr16	67929633
chr16:67929752	C C	T T	1	a0001c0001t0002 a0001c0001t0002	1	HG02602.hp2 HG02602.hp2	3_prime_UTR_variant	MODIFIER	c.182G>A c.182G>A	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	7/7	182	chr16	67929752

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	chr	pos
chr16:67930128	G G	C C	1	a0002c0002t0001g0013 a0002c0002t0001g0013	2	HG01433.hp2 HG03098.hp2 HG01433.hp2 HG03098.hp2	intron_variant	MODIFIER	c.634-33C>G c.634-33C>G	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	6/6	chr16	67930128
chr16:67930159	G G	A A	1	a0002c0002t0001g0005 a0002c0002t0001g0005	4	HG02572.hp1 HG02717.hp2 HG02886.hp2 others(1): Show HG02572.hp1 HG02717.hp2 HG02886.hp2 HG02976.hp1	intron_variant	MODIFIER	c.633+26C>T c.633+26C>T	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	6/6	chr16	67930159
chr16:67930335	G G	T T	1	a0001c0001t0001g0010 a0001c0001t0001g0010	3	HG01884.hp1 HG02257.hp1 NA19030.hp1 HG01884.hp1 HG02257.hp1 NA19030.hp1	intron_variant	MODIFIER	c.500-17C>A c.500-17C>A	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	5/6	chr16	67930335
chr16:67930701	C C	T T	4	a0002c0002t0001g0004 a0002c0002t0001g0013 a0003c0003t0001g0022 others(1): Show a0002c0002t0001g0004 a0002c0002t0001g0013 a0003c0003t0001g0022 a0008c0009t0001g0020	12	HG01433.hp2 HG02622.hp2 HG02809.hp1 others(9): Show HG01433.hp2 HG02622.hp2 HG02809.hp1 HG02896.hp1 HG03098.hp2 HG03195.hp2 HG03225.hp1 HG03486.hp1 HG03540.hp1 HG06807.hp2 NA18522.hp1 NA19240.hp1	intron_variant	MODIFIER	c.318+25G>A c.318+25G>A	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	4/6	chr16	67930701
chr16:67930850	G G	A A	1	a0001c0001t0001g0006 a0001c0001t0001g0006	4	HG01358.hp2 HG01496.hp1 HG01952.hp1 others(1): Show HG01358.hp2 HG01496.hp1 HG01952.hp1 NA21309.hp2	intron_variant	MODIFIER	c.237-43C>T c.237-43C>T	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	3/6	chr16	67930850
chr16:67930886	C C	T T	1	a0002c0002t0001g0021 a0002c0002t0001g0021	1	HG03491.hp2 HG03491.hp2	intron_variant	MODIFIER	c.236+34G>A c.236+34G>A	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	3/6	chr16	67930886
chr16:67930894	G G	A A	1	a0001c0001t0001g0026 a0001c0001t0001g0026	1	HG02922.hp1 HG02922.hp1	intron_variant	MODIFIER	c.236+26C>T c.236+26C>T	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	3/6	chr16	67930894
chr16:67931075	T T	C C	1	a0001c0001t0001g0027 a0001c0001t0001g0027	1	HG01993.hp1 HG01993.hp1	intron_variant	MODIFIER	c.156+23A>G c.156+23A>G	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	2/6	chr16	67931075
chr16:67931094	G G	C C	1	a0002c0002t0001g0028 a0002c0002t0001g0028	1	NA19240.hp2 NA19240.hp2	splice_region_variant&intron_variant	LOW	c.156+4C>G c.156+4C>G	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	2/6	chr16	67931094
chr16:67931248	C C	G G	1	a0001c0001t0001g0019 a0001c0001t0001g0019	1	NA19030.hp2 NA19030.hp2	intron_variant	MODIFIER	c.53-47G>C c.53-47G>C	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	1/6	chr16	67931248
chr16:67931307	G G	A A	1	a0001c0001t0001g0031 a0001c0001t0001g0031	1	HG02486.hp2 HG02486.hp2	intron_variant	MODIFIER	c.53-106C>T c.53-106C>T	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	1/6	chr16	67931307
chr16:67931437	C C	T T	2	a0001c0001t0001g0012 a0002c0002t0001g0018 a0001c0001t0001g0012 a0002c0002t0001g0018	3	HG02280.hp1 HG03130.hp1 NA19075.hp1 HG02280.hp1 HG03130.hp1 NA19075.hp1	intron_variant	MODIFIER	c.53-236G>A c.53-236G>A	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	1/6	chr16	67931437
chr16:67931454	A A	G G	1	a0001c0001t0001g0017 a0001c0001t0001g0017	1	NA19087.hp2 NA19087.hp2	intron_variant	MODIFIER	c.53-253T>C c.53-253T>C	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	1/6	chr16	67931454
chr16:67931479	G G	A A	1	a0001c0001t0001g0015 a0001c0001t0001g0015	2	HG03704.hp1 HG03942.hp2 HG03704.hp1 HG03942.hp2	intron_variant	MODIFIER	c.53-278C>T c.53-278C>T	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	1/6	chr16	67931479
chr16:67931489	G G	A A	1	a0001c0001t0001g0010 a0001c0001t0001g0010	3	HG01884.hp1 HG02257.hp1 NA19030.hp1 HG01884.hp1 HG02257.hp1 NA19030.hp1	intron_variant	MODIFIER	c.53-288C>T c.53-288C>T	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	1/6	chr16	67931489
chr16:67931597	G G	C C	1	a0001c0001t0001g0032 a0001c0001t0001g0032	1	HG01081.hp1 HG01081.hp1	intron_variant	MODIFIER	c.52+204C>G c.52+204C>G	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	1/6	chr16	67931597
chr16:67931619	A A	G G	1	a0001c0001t0001g0011 a0001c0001t0001g0011	2	NA18960.hp1 NA18984.hp1 NA18960.hp1 NA18984.hp1	intron_variant	MODIFIER	c.52+182T>C c.52+182T>C	CTRL	ENSG00000141086.18	transcript	ENST00000574481.6	protein_coding	1/6	chr16	67931619

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🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 9)

CCoding Level Haplotype Info (Total: 12)

TTranscript Level Haplotype Info (Total: 4)

GGenebody Level Haplotype Info (Total: 33)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 12)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 15)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 33)

Haplotype Details by Sample (Haploid Level) (Total: 312)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 8)

CCoding Level Variants (Synonymous Mutations) (Total: 3)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 3)

GGenebody Level Haplotype Variants (Intron) (Total: 17)

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Annotation (Repeats)

Annotation (SNP Array)